Pregenerated sensors for SLC9A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028854Ensembl transcript IDs: ENSMUST00000030669.8
Found 160 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGTTCTGTAGGAGAGGACCCTTCCCAGGAGGCAGGGGCAAGCCGTaGTGCAGTGGGGGCTGTGGGCCCAGCTGCCATGCGGAGGAAGGG | + |
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Preference number: 1 (lower is better) Translates to: QFCRRGPFPGGRGKP*CSGGCGPSCHAEEG Trigger: CCCTTCCTCCGCATGGCAGCTGGGCCCACAGCCCCCACTGCAGCACGGCTTGCCCCTGCCTCCTGGGAAGGGTCCTCTCCTACAGAACTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| 3UTR CCA 90 bp | ACAGCTCGGGTGGTGGCCAGAGCACCGAGGCTAGCGGGAGAACCGTaGCGCTGCCGTGGGCAGCTCTGCTATGGGTCACGGGTCTGTTTC | + |
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Preference number: 1 (lower is better) Translates to: TARVVARAPRLAGEP*RCRGQLCYGSRVCF Trigger: GAAACAGACCCGTGACCCATAGCAGAGCTGCCCACGGCAGCGCCACGGTTCTCCCGCTAGCCTCGGTGCTCTGGCCACCACCCGAGCTGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| 3UTR GCA 90 bp | ACTGGCATGGGGGACTCAAAGGGTCTGAAAACAAGAGTGCCTCTGTaGAAACAGAATCATACTTACAGTGAGGTGCAAATAAGCCAAGTG | + |
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Preference number: 1 (lower is better) Translates to: TGMGDSKGLKTRVPL*KQNHTYSEVQISQV Trigger: CACTTGGCTTATTTGCACCTCACTGTAAGTATGATTCTGTTTGCACAGAGGCACTCTTGTTTTCAGACCCTTTGAGTCCCCCATGCCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| 3UTR TCA 90 bp | TCTGAAAACAAGAGTGCCTCTGTGCAAACAGAATCATACTTACAGTaGGGTGCAAATAAGCCAAGTGTAAGTAGAGGACACTTTCCAGCG | + |
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Preference number: 1 (lower is better) Translates to: SENKSASVQTESYLQ*GANKPSVSRGHFPA Trigger: CGCTGGAAAGTGTCCTCTACTTACACTTGGCTTATTTGCACCTCACTGTAAGTATGATTCTGTTTGCACAGAGGCACTCTTGTTTTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| 3UTR-3UTR GCA 90 bp | CTAGAGATGGGGCGGGGCCTGCCTCAGCAGCCCAGCCGTCCGCCAAATGGATGGGGCTGTGGGCCCAGCTaGCATGCGGAGGAAGGGGGC | + |
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Preference number: 2 (lower is better) Translates to: LEMGRGLPQQPSRPPNGWGCGPS*HAEEGG Trigger: GCCCCCTTCCTCCGCATGGCAGCTGGGCCCACAGCC...CCATCCATTTGGCGGACGGCTGGGCTGCTGAGGCAGGCCCCGCCCCATCTCTAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCTAGCGGGAGAACCGTGGCGCTGCCGTGGGCAGCTCTGCTATGGGTCACGGCAAGCCGTGCTGCAGTaGGGGCTGTGGGCCCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: RLAGEPWRCRGQLCYGSRQAVLQ*GLWAQL Trigger: CAGCTGGGCCCACAGCCCCCACTGCAGCACGGCTTG...CCGTGACCCATAGCAGAGCTGCCCACGGCAGCGCCACGGTTCTCCCGCTAGCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| 3UTR CAA 90 bp | GGCGGGGCCTGCCTCAGCAGCCCAGCCGTCCGCCAAATGGATGGATaGGGAAGGCAGTTCTGTAGGAGAGGACCCTTCCCAGGAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: GGACLSSPAVRQMDG*GRQFCRRGPFPGGR Trigger: CCTGCCTCCTGGGAAGGGTCCTCTCCTACAGAACTGCCTTCCCAATCCATCCATTTGGCGGACGGCTGGGCTGCTGAGGCAGGCCCCGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| 3UTR-3UTR GCA 90 bp | GTAAGGACAGCTCGGGTGGTGGCCAGAGCACCGAGGCTAGCGGGAGAACCGTGGTGCCGTGGGCAGCTCTaGTATGGGTCACGGGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: VRTARVVARAPRLAGEPWCRGQL*YGSRVC Trigger: ACAGACCCGTGACCCATAGCAGAGCTGCCCACGGCA...CCACGGTTCTCCCGCTAGCCTCGGTGCTCTGGCCACCACCCGAGCTGTCCTTAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| 3UTR-3UTR GCA 90 bp | GTTTCCCAGCCACAGGCCTGCTGTCCTCTGATACAGGGGCCCAGTCACGGCCACAGCTCCCTCCTTTCCTaGTGGGACCACAGTGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: VSQPQACCPLIQGPSHGHSSLLS*WDHSGA Trigger: GGCTCCACTGTGGTCCCAGCAGGAAAGGAGGGAGCT...GTGGCCGTGACTGGGCCCCTGTATCAGAGGACAGCAGGCCTGTGGCTGGGAAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| 3UTR-3UTR CCA 90 bp | CCATGCACCCATGGCCCCATCCCCTGGGAGGGACCCTCTGACTATTATTGCACGACCGTGGCGCTGCCGTaGGCAGCTCTGCTATGGGTC | + |
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Preference number: 2 (lower is better) Translates to: PCTHGPIPWEGPSDYYCTTVALP*AALLWV Trigger: GACCCATAGCAGAGCTGCCCACGGCAGCGCCACGGT...CGTGCAATAATAGTCAGAGGGTCCCTCCCAGGGGATGGGGCCATGGGTGCATGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| 3UTR-3UTR GCA 90 bp | CCATGCACCCATGGCCCCATCCCCTGGGAGGGACCCTCTGACTATTATTGCACGCCACATCAGAATCGGTaGTGTGGGCAAGGGCCCCCA | + |
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Preference number: 2 (lower is better) Translates to: PCTHGPIPWEGPSDYYCTPHQNR*CGQGPP Trigger: TGGGGGCCCTTGCCCACAGCACCGATTCTGATGTGG...CGTGCAATAATAGTCAGAGGGTCCCTCCCAGGGGATGGGGCCATGGGTGCATGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| 3UTR-3UTR TCA 90 bp | CCATGCACCCATGGCCCCATCCCCTGGGAGGGACCCTCTGACTATTATTGCACGGAAAGGGCAGAGCTCTaGCTGGCATGGGGGACTCAA | + |
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Preference number: 2 (lower is better) Translates to: PCTHGPIPWEGPSDYYCTERAEL*LAWGTQ Trigger: TTGAGTCCCCCATGCCAGTCAGAGCTCTGCCCTTTC...CGTGCAATAATAGTCAGAGGGTCCCTCCCAGGGGATGGGGCCATGGGTGCATGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| 3UTR-3UTR GCA 90 bp | TGTGAGCAAAGGCCTCTAGGGGGTCCAGTACTTTCTACTCTACAGAATGCAGGAGGCAGGGGCAAGCCGTaGTGCAGTGGGGGCTGTGGG | + |
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Preference number: 2 (lower is better) Translates to: CEQRPLGGPVLSTLQNAGGRGKP*CSGGCG Trigger: CCCACAGCCCCCACTGCAGCACGGCTTGCCCCTGCC...TCCTGCATTCTGTAGAGTAGAAAGTACTGGACCCCCTAGAGGCCTTTGCTCACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| 3UTR-3UTR CCA 90 bp | GCAAAGGAGGTACCAGGAGGCCCCCTGCTGGTGAGCTTGAGTCATGACAGGTTGCAGCCGTCCGCCAAATaGATGGATTGGGAAGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: AKEVPGGPLLVSLSHDRLQPSAK*MDWEGS Trigger: ACTGCCTTCCCAATCCATCCATTTGGCGGACGGCTG...CAACCTGTCATGACTCAAGCTCACCAGCAGGGGGCCTCCTGGTACCTCCTTTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGAGCAAAGGCCTCTAGGGGGTCCAGTACTTTCTACTCTACAGAATGCAGGACTGCTGGGACCACAGTaGAGCCAGTGGCTCTTTGGT | + |
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Preference number: 2 (lower is better) Translates to: CEQRPLGGPVLSTLQNAGLLGPQ*SQWLFG Trigger: ACCAAAGAGCCACTGGCTCCACTGTGGTCCCAGCAG...TCCTGCATTCTGTAGAGTAGAAAGTACTGGACCCCCTAGAGGCCTTTGCTCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| 3UTR-3UTR GCA 90 bp | CCATGCACCCATGGCCCCATCCCCTGGGAGGGACCCTCTGACTATTATTGCACGACAAGAGTGCCTCTGTaGAAACAGAATCATACTTAC | + |
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Preference number: 2 (lower is better) Translates to: PCTHGPIPWEGPSDYYCTTRVPL*KQNHTY Trigger: GTAAGTATGATTCTGTTTGCACAGAGGCACTCTTGT...CGTGCAATAATAGTCAGAGGGTCCCTCCCAGGGGATGGGGCCATGGGTGCATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGAGCAAAGGCCTCTAGGGGGTCCAGTACTTTCTACTCTACAGAATGCAGGAGGGACTCAAAGGGTCTaGAAACAAGAGTGCCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: CEQRPLGGPVLSTLQNAGGTQRV*KQECLC Trigger: ACAGAGGCACTCTTGTTTTCAGACCCTTTGAGTCCC...TCCTGCATTCTGTAGAGTAGAAAGTACTGGACCCCCTAGAGGCCTTTGCTCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| 3UTR CCA 72 bp | ACCCTTCCCAGGAGGCAGGGGCAAGCCGTGCTGCAGTaGGGGCTGTGGGCCCAGCTGCCATGCGGAGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: TLPRRQGQAVLQ*GLWAQLPCGGR Trigger: CCTTCCTCCGCATGGCAGCTGGGCCCACAGCCCCCACTGCAGCACGGCTTGCCCCTGCCTCCTGGGAAGGGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| 3UTR CCA 72 bp | GTGGTGGCCAGAGCACCGAGGCTAGCGGGAGAACCGTaGCGCTGCCGTGGGCAGCTCTGCTATGGGTCACGG | + |
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Preference number: 3 (lower is better) Translates to: VVARAPRLAGEP*RCRGQLCYGSR Trigger: CCGTGACCCATAGCAGAGCTGCCCACGGCAGCGCCACGGTTCTCCCGCTAGCCTCGGTGCTCTGGCCACCAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| 3UTR CCA 72 bp | GGGAGAACCGTGGCGCTGCCGTGGGCAGCTCTGCTATaGGTCACGGGTCTGTTTCCCAGCCACAGGCCTGCT | + |
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Preference number: 3 (lower is better) Translates to: GRTVALPWAALL*VTGLFPSHRPA Trigger: AGCAGGCCTGTGGCTGGGAAACAGACCCGTGACCCATAGCAGAGCTGCCCACGGCAGCGCCACGGTTCTCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| 3UTR TCA 72 bp | GCAGAGAAGCTCAGAGACGCCCTCAGCCCGCAGCTCTaGGTAAGGACAGCTCGGGTGGTGGCCAGAGCACCG | + |
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Preference number: 3 (lower is better) Translates to: AEKLRDALSPQL*VRTARVVARAP Trigger: CGGTGCTCTGGCCACCACCCGAGCTGTCCTTACTCAGAGCTGCGGGCTGAGGGCGTCTCTGAGCTTCTCTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| 3UTR GCA 72 bp | AGTCACGGCCACGGAAGGCTCAGCTCCCTCCTTTCCTaGTGGGACCACAGTGGAGCCAGTGGCTCTTTGGTT | + |
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Preference number: 3 (lower is better) Translates to: SHGHGRLSSLLS*WDHSGASGSLV Trigger: AACCAAAGAGCCACTGGCTCCACTGTGGTCCCAGCAGGAAAGGAGGGAGCTGAGCCTTCCGTGGCCGTGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| 3UTR GCA 72 bp | CCCTCTGACTATTATTGCACGATCCTGGGGAGGGAGTaGCCAGGGGTTGGGCAGATACCCATGGGCTTGGCC | + |
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Preference number: 3 (lower is better) Translates to: PSDYYCTILGRE*PGVGQIPMGLA Trigger: GGCCAAGCCCATGGGTATCTGCCCAACCCCTGGGCACTCCCTCCCCAGGATCGTGCAATAATAGTCAGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| 3UTR CCA 72 bp | GCCTCAGCAGCCCAGCCGTCCGCCAAATGGATGGATTaGGAAGGCAGTTCTGTAGGAGAGGACCCTTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: ASAAQPSAKWMD*EGSSVGEDPSQ Trigger: CTGGGAAGGGTCCTCTCCTACAGAACTGCCTTCCCAATCCATCCATTTGGCGGACGGCTGGGCTGCTGAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| 3UTR CCA 72 bp | CCTGGGAGGGACCCTCTGACTATTATTGCACGATCCTaGGGAGGGAGTGCCCAGGGGTTGGGCAGATACCCA | + |
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Preference number: 3 (lower is better) Translates to: PGRDPLTIIARS*GGSAQGLGRYP Trigger: TGGGTATCTGCCCAACCCCTGGGCACTCCCTCCCCAGGATCGTGCAATAATAGTCAGAGGGTCCCTCCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| 3UTR CCA 72 bp | GCCAGTGGCTCTTTGGTTAGAAATGATGATCAAGGATaGAGAGTTGGTCTGGATGAGGAGGGGCTGGAGGGA | + |
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Preference number: 3 (lower is better) Translates to: ASGSLVRNDDQG*RVGLDEEGLEG Trigger: TCCCTCCAGCCCCTCCTCATCCAGACCAACTCTCCATCCTTGATCATCATTTCTAACCAAAGAGCCACTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| 3UTR-3UTR CAA 90 bp | GGTCCAGTACTTTCTACTCTACAGAATGCAGGAAAGAGAGTGGTCCAGATAAGGGGAGCCAGTGGCTCTTaGGTTAGAAATGATGATCAA | + |
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Preference number: 3 (lower is better) Translates to: GPVLSTLQNAGKRVVQIRGASGS*VRNDDQ Trigger: TTGATCATCATTTCTAACCAAAGAGCCACTGGCTCC...CCTTATCTGGACCACTCTCTTTCCTGCATTCTGTAGAGTAGAAAGTACTGGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| 3UTR GCA 72 bp | GGGGACTCAAAGGGTCTGAAAACAAGAGTGCCTCTGTaGAAACAGAATCATACTTACAGTGAGGTGCAAATA | + |
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Preference number: 3 (lower is better) Translates to: GDSKGLKTRVPL*KQNHTYSEVQI Trigger: TATTTGCACCTCACTGTAAGTATGATTCTGTTTGCACAGAGGCACTCTTGTTTTCAGACCCTTTGAGTCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR TCA 90 bp | CTAGAGATGGGGCGGGGCCTGCCTCAGCAGCCCAGCCGTCCGCCAAATGGATGGCCAGCACCCGGGCGATaGGGCAGAAGAGCAGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: LEMGRGLPQQPSRPPNGWPAPGR*GRRAGC Trigger: GCACCCTGCTCTTCTGCCTCATCGCCCGGGTGCTGG...CCATCCATTTGGCGGACGGCTGGGCTGCTGAGGCAGGCCCCGCCCCATCTCTAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR GCA 90 bp | AGGCTAGCGGGAGAACCGTGGCGCTGCCGTGGGCAGCTCTGCTATGGGTCACGGGTGGGTCTGAGCCTATaGGGGCCCGAGACAGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: RLAGEPWRCRGQLCYGSRVGLSL*GPETGW Trigger: CCACCCTGTCTCGGGCCCGCATAGGCTCAGACCCAC...CCGTGACCCATAGCAGAGCTGCCCACGGCAGCGCCACGGTTCTCCCGCTAGCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| 3UTR CAA 72 bp | AGGGAGTGCCCAGGGGTTGGGCAGATACCCATGGGCTaGGCCCCAGCCATGGTGGCGGTAGGGAGTGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: RECPGVGQIPMG*APAMVAVGSVC Trigger: GCACACACTCCCTACCGCCACCATGGCTGGGGCCAAGCCCATGGGTATCTGCCCAACCCCTGGGCACTCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR GCA 90 bp | CCAGGTCAGGAGACAAGAGGAGCGCCCAGCCCCCACTCTCGTGGGAGAGTCTGTCTGGCAGTAGGGCTGTaGTGGAGGCCGTGGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: PGQETRGAPSPHSRGRVCLAVGL*WRPWLL Trigger: CAGGAGCCACGGCCTCCAGCACAGCCCTACTGCCAG...ACAGACTCTCCCACGAGAGTGGGGGCTGGGCGCTCCTCTTGTCTCCTGACCTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR GCA 90 bp | CTGTGGGCCCAGCTGCCATGCGGAGGAAGGGGGCAGAGCCAATCCAGGTCAGGAATCTTCTGCTCCAGCTaGCGGGCCTTCTGCCTCCGG | + |
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Preference number: 4 (lower is better) Translates to: LWAQLPCGGRGQSQSRSGIFCSS*RAFCLR Trigger: CCGGAGGCAGAAGGCCCGGCAGCTGGAGCAGAAGAT...TCCTGACCTGGATTGGCTCTGCCCCCTTCCTCCGCATGGCAGCTGGGCCCACAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR CCA 90 bp | GGAGACAAGAGGAGCGCCCAGCCCCCACTCTCGTGGGAGAGTCTGTGGGACACCGTCCAGTTCCACTGGTaGGAGCCGGCCACAGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: GDKRSAQPPLSWESLWDTVQFHW*EPATVE Trigger: CTCCACTGTGGCCGGCTCCCACCAGTGGAACTGGAC...GGTGTCCCACAGACTCTCCCACGAGAGTGGGGGCTGGGCGCTCCTCTTGTCTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR CCA 90 bp | CTAGAGATGGGGCGGGGCCTGCCTCAGCAGCCCAGCCGTCCGCCAAATGGATGGCGACCAGGGGCCGAATaGTCATGCCCTGCACAAAGA | + |
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Preference number: 4 (lower is better) Translates to: LEMGRGLPQQPSRPPNGWRPGAE*SCPAQR Trigger: TCTTTGTGCAGGGCATGACCATTCGGCCCCTGGTCG...CCATCCATTTGGCGGACGGCTGGGCTGCTGAGGCAGGCCCCGCCCCATCTCTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR TCA 90 bp | GTTTCCCAGCCACAGGCCTGCTGTCCTCTGATACAGGGGCCCAGTCACGGCCACGGTGACATCCCCAATTaGGCGTTCCCGGGGTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: VSQPQACCPLIQGPSHGHGDIPN*AFPGWF Trigger: GAACCACCCCGGGAACGCTCAATTGGGGATGTCACC...GTGGCCGTGACTGGGCCCCTGTATCAGAGGACAGCAGGCCTGTGGCTGGGAAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR TCA 90 bp | GGCCTGCTGTCCTCTGATACAGGGGCCCAGTCACGGCCACGGAAGGCTCAGCTCCTCCGGGACGATGCTTaGGATGGTGGGGATCACATG | + |
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Preference number: 4 (lower is better) Translates to: GLLSSDTGAQSRPRKAQLLRDDA*DGGDHM Trigger: CATGTGATCCCCACCATCTCAAGCATCGTCCCGGAG...GAGCTGAGCCTTCCGTGGCCGTGACTGGGCCCCTGTATCAGAGGACAGCAGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR TCA 90 bp | GGGCAGAGCCAATCCAGGTCAGGAGACAAGAGGAGCGCCCAGCCCCCACTCTCGGCGCATCACTACTCCTaGGGCGATGAGGGCCATGAT | + |
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Preference number: 4 (lower is better) Translates to: GQSQSRSGDKRSAQPPLSAHHYS*GDEGHD Trigger: ATCATGGCCCTCATCGCCTCAGGAGTAGTGATGCGC...CGAGAGTGGGGGCTGGGCGCTCCTCTTGTCTCCTGACCTGGATTGGCTCTGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR CCA 90 bp | AGGAGACAAGAGGAGCGCCCAGCCCCCACTCTCGTGGGAGAGTCTGTGGGACACCTGTGCTGGAGGCCGTaGCTCCTGAGAACAGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: RRQEERPAPTLVGESVGHLCWRP*LLRTGS Trigger: GCTACCTGTTCTCAGGAGCCACGGCCTCCAGCACAG...GTGTCCCACAGACTCTCCCACGAGAGTGGGGGCTGGGCGCTCCTCTTGTCTCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR CCA 90 bp | GTAAGGACAGCTCGGGTGGTGGCCAGAGCACCGAGGCTAGCGGGAGAACCGTGGCAGGCAGGTCTGCCTTaGGTTCATAGGCCAGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: VRTARVVARAPRLAGEPWQAGLP*VHRPVG Trigger: ACCCACTGGCCTATGAACCCAAGGCAGACCTGCCTG...CCACGGTTCTCCCGCTAGCCTCGGTGCTCTGGCCACCACCCGAGCTGTCCTTAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR TCA 90 bp | AGGCTAGCGGGAGAACCGTGGCGCTGCCGTGGGCAGCTCTGCTATGGGTCACGGGGAAACCTATCTTCATaGGGCAGGCCAGGAGAATCC | + |
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Preference number: 4 (lower is better) Translates to: RLAGEPWRCRGQLCYGSRGNLSS*GRPGES Trigger: GGATTCTCCTGGCCTGCCTCATGAAGATAGGTTTCC...CCGTGACCCATAGCAGAGCTGCCCACGGCAGCGCCACGGTTCTCCCGCTAGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR GCA 90 bp | AGGCTAGCGGGAGAACCGTGGCGCTGCCGTGGGCAGCTCTGCTATGGGTCACGGCACAGATGTCCTCGATaGCTGTCAGAAGGTGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: RLAGEPWRCRGQLCYGSRHRCPR*LSEGGP Trigger: TGGACCACCTTCTGACAGGCATCGAGGACATCTGTG...CCGTGACCCATAGCAGAGCTGCCCACGGCAGCGCCACGGTTCTCCCGCTAGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| 3UTR CAA 72 bp | GGAGGCCCCCTGCTGGTGAGCTTGAGTCATGACAGGTaGGGCCACATCAGAATCGGTGCTGTGGGCAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: GGPLLVSLSHDR*GHIRIGAVGKG Trigger: GCCCTTGCCCACAGCACCGATTCTGATGTGGCCCAACCTGTCATGACTCAAGCTCACCAGCAGGGGGCCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR TCA 90 bp | GTTTCCCAGCCACAGGCCTGCTGTCCTCTGATACAGGGGCCCAGTCACGGCCACCTGTCAGGTAGTTGGTaGTCTTCTGCTCCAGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: VSQPQACCPLIQGPSHGHLSGSW*SSAPAA Trigger: GGCAGCTGGAGCAGAAGATCACCAACTACCTGACAG...GTGGCCGTGACTGGGCCCCTGTATCAGAGGACAGCAGGCCTGTGGCTGGGAAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR TCA 90 bp | CCTGGGAGGGACCCTCTGACTATTATTGCACGATCCTGGGGAGGGAGTGCCCAGGGGGGCCTGGGTCACTaGGGCAGCGTTGTATTCTCT | + |
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Preference number: 4 (lower is better) Translates to: PGRDPLTIIARSWGGSAQGGLGH*GSVVFS Trigger: AGAGAATACAACGCTGCCTCAGTGACCCAGGCCCCC...CTGGGCACTCCCTCCCCAGGATCGTGCAATAATAGTCAGAGGGTCCCTCCCAGG 61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR GCA 90 bp | CTAGAGATGGGGCGGGGCCTGCCTCAGCAGCCCAGCCGTCCGCCAAATGGATGGACGCATTCCACAGTGTaGCCACCACAGCAAAGATCA | + |
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Preference number: 4 (lower is better) Translates to: LEMGRGLPQQPSRPPNGWTHSTV*PPQQRS Trigger: TGATCTTTGCTGTGGTGGGCACACTGTGGAATGCGT...CCATCCATTTGGCGGACGGCTGGGCTGCTGAGGCAGGCCCCGCCCCATCTCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR CCA 90 bp | GTAAGGACAGCTCGGGTGGTGGCCAGAGCACCGAGGCTAGCGGGAGAACCGTGGATTTGTGGGAGATGTTaGCCTCCACATAGGGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: VRTARVVARAPRLAGEPWICGRC*PPHRGA Trigger: TGCGCCCCTATGTGGAGGCCAACATCTCCCACAAAT...CCACGGTTCTCCCGCTAGCCTCGGTGCTCTGGCCACCACCCGAGCTGTCCTTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR CCA 90 bp | CCTGGGAGGGACCCTCTGACTATTATTGCACGATCCTGGGGAGGGAGTGCCCAGAAGGTCCAGTTCCACTaGTGGGAGCCGGCCACAGTG | + |
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Preference number: 4 (lower is better) Translates to: PGRDPLTIIARSWGGSAQKVQFH*WEPATV Trigger: CACTGTGGCCGGCTCCCACCAGTGGAACTGGACCTT...CTGGGCACTCCCTCCCCAGGATCGTGCAATAATAGTCAGAGGGTCCCTCCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR CCA 90 bp | GCAAAGGAGGTACCAGGAGGCCCCCTGCTGGTGAGCTTGAGTCATGACAGGTTGAGACTCAGGGGACTGTaGGGAGGCCGGGTCAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: AKEVPGGPLLVSLSHDRLRLRGL*GGRVNG Trigger: ACCATTGACCCGGCCTCCCCACAGTCCCCTGAGTCT...CAACCTGTCATGACTCAAGCTCACCAGCAGGGGGCCTCCTGGTACCTCCTTTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR CCA 90 bp | GGCAGAGCTCTGACTGGCATGGGGGACTCAAAGGGTCTGAAAACAAGAGTGCCTCTCAGGGTGGGGGCCTaGGTCACTGAGGCAGCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GRALTGMGDSKGLKTRVPLRVGA*VTEAAL Trigger: CAACGCTGCCTCAGTGACCCAGGCCCCCACCCTGAG...AGGCACTCTTGTTTTCAGACCCTTTGAGTCCCCCATGCCAGTCAGAGCTCTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| 3UTR CAA 72 bp | TGCCTCAGCAGCCCAGCCGTCCGCCAAATGGATGGATaGGGAAGGCAGTTCTGTAGGAGAGGACCCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: CLSSPAVRQMDG*GRQFCRRGPFP Trigger: TGGGAAGGGTCCTCTCCTACAGAACTGCCTTCCCAATCCATCCATTTGGCGGACGGCTGGGCTGCTGAGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR GCA 90 bp | CAGGTCAGGAGACAAGAGGAGCGCCCAGCCCCCACTCTCGTGGGAGAGTCTGTGACCAGCTCAATGGCCTaGTTCATCTCCATCTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QVRRQEERPAPTLVGESVTSSMA*FISILW Trigger: CCACAAGATGGAGATGAAGCAGGCCATTGAGCTGGT...CACAGACTCTCCCACGAGAGTGGGGGCTGGGCGCTCCTCTTGTCTCCTGACCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR TCA 90 bp | AATCATGTCACTGTCGAATGTGCCCCAGCGCCCAGCAGAGAAGCTCAGAGACGCACTGTCCTTTGGGGATaGAAGGCTCTCCCTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NHVTVECAPAPSREAQRRTVLWG*KALPPQ Trigger: CTGGGGAGGGAGAGCCTTTCATCCCCAAAGGACAGT...GCGTCTCTGAGCTTCTCTGCTGGGCGCTGGGGCACATTCGACAGTGACATGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR GCA 90 bp | GCAAAGGAGGTACCAGGAGGCCCCCTGCTGGTGAGCTTGAGTCATGACAGGTTGAGGCAGGAAGTAGCCTaGATCCAGGATGATGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AKEVPGGPLLVSLSHDRLRQEVA*IQDDGW Trigger: CCACCCATCATCCTGGATGCAGGCTACTTCCTGCCT...CAACCTGTCATGACTCAAGCTCACCAGCAGGGGGCCTCCTGGTACCTCCTTTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR GCA 90 bp | GCAAAGGAGGTACCAGGAGGCCCCCTGCTGGTGAGCTTGAGTCATGACAGGTTGTCGGGAGGTGAAAGCTaGGATTACCCCGTAGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: AKEVPGGPLLVSLSHDRLSGGES*DYPVDH Trigger: GTGGTCTACGGGGTAATCGCAGCTTTCACCTCCCGA...CAACCTGTCATGACTCAAGCTCACCAGCAGGGGGCCTCCTGGTACCTCCTTTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR GCA 90 bp | GGAGACAAGAGGAGCGCCCAGCCCCCACTCTCGTGGGAGAGTCTGTGGGACACCGGGTTTTCTGCAGATTaGTCCTCAAGATTTTGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GDKRSAQPPLSWESLWDTGFSAD*SSRFCG Trigger: TCCGCAAAATCTTGAGGAGCAATCTGCAGAAAACCC...GGTGTCCCACAGACTCTCCCACGAGAGTGGGGGCTGGGCGCTCCTCTTGTCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR GCA 90 bp | ATCATGTCACTGTCGAATGTGCCCCAGCGCCCAGCAGAGAAGCTCAGAGACGCCGATGACAGGCAGGTCTaGCTTGGGTTCATAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IMSLSNVPQRPAEKLRDADDRQV*LGFIGQ Trigger: CTGGCCTATGAACCCAAGGCAGACCTGCCTGTCATC...GGCGTCTCTGAGCTTCTCTGCTGGGCGCTGGGGCACATTCGACAGTGACATGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR CCA 90 bp | CCATGCACCCATGGCCCCATCCCCTGGGAGGGACCCTCTGACTATTATTGCACGATGATTCCGGACAGGTaGAAGAGCTCAGCTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PCTHGPIPWEGPSDYYCTMIPDR*KSSADR Trigger: CCTGTCAGCTGAGCTCTTCCACCTGTCCGGAATCAT...CGTGCAATAATAGTCAGAGGGTCCCTCCCAGGGGATGGGGCCATGGGTGCATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR CCA 90 bp | CCTGGGAGGGACCCTCTGACTATTATTGCACGATCCTGGGGAGGGAGTGCCCAGCTTCCTCCTTGTCCTTaGACAGTGCTGGCAAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: PGRDPLTIIARSWGGSAQLPPCP*TVLARC Trigger: GCATCTTGCCAGCACTGTCCAAGGACAAGGAGGAAG...CTGGGCACTCCCTCCCCAGGATCGTGCAATAATAGTCAGAGGGTCCCTCCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR TCA 90 bp | GCAAAGGAGGTACCAGGAGGCCCCCTGCTGGTGAGCTTGAGTCATGACAGGTTGGTGGAAGAGCTCAGCTaGCAGGTAAGCCATGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AKEVPGGPLLVSLSHDRLVEELS*QVSHVA Trigger: AGCTACATGGCTTACCTGTCAGCTGAGCTCTTCCAC...CAACCTGTCATGACTCAAGCTCACCAGCAGGGGGCCTCCTGGTACCTCCTTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR CCA 90 bp | CAGGTCAGGAGACAAGAGGAGCGCCCAGCCCCCACTCTCGTGGGAGAGTCTGTGAAGTTGGTCAAATTGTaGTCATCTGGGCGATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QVRRQEERPAPTLVGESVKLVKL*SSGRWR Trigger: TCTCCATCGCCCAGATGACCACAATTTGACCAACTT...CACAGACTCTCCCACGAGAGTGGGGGCTGGGCGCTCCTCTTGTCTCCTGACCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR CCA 90 bp | CAGGTCAGGAGACAAGAGGAGCGCCCAGCCCCCACTCTCGTGGGAGAGTCTGTGATGGTGGGGATCACATaGAAACCTATCTTCATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QVRRQEERPAPTLVGESVMVGIT*KPIFMR Trigger: CCTCATGAAGATAGGTTTCCATGTGATCCCCACCAT...CACAGACTCTCCCACGAGAGTGGGGGCTGGGCGCTCCTCTTGTCTCCTGACCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR CCA 90 bp | CCTGGGAGGGACCCTCTGACTATTATTGCACGATCCTGGGGAGGGAGTGCCCAGATCCAGGATGATGGGTaGCAGCAGGAAGAGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PGRDPLTIIARSWGGSAQIQDDG*QQEEEE Trigger: TTCTTCCTCTTCCTGCTGCCACCCATCATCCTGGAT...CTGGGCACTCCCTCCCCAGGATCGTGCAATAATAGTCAGAGGGTCCCTCCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR CCA 90 bp | CCAGGTCAGGAGACAAGAGGAGCGCCCAGCCCCCACTCTCGTGGGAGAGTCTGTCCACAGAGTCATAGCTaGCAAATTCCTCAAAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PGQETRGAPSPHSRGRVCPQSHS*QIPQRG Trigger: ACCTCTTTGAGGAATTTGCCAGCTATGACTCTGTGG...ACAGACTCTCCCACGAGAGTGGGGGCTGGGCGCTCCTCTTGTCTCCTGACCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR CCA 90 bp | ATCATGTCACTGTCGAATGTGCCCCAGCGCCCAGCAGAGAAGCTCAGAGACGCCATGCCTGTCAGAAGGTaGTCCAGGAACTGTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IMSLSNVPQRPAEKLRDAMPVRR*SRNCVW Trigger: CCACACACAGTTCCTGGACCACCTTCTGACAGGCAT...GGCGTCTCTGAGCTTCTCTGCTGGGCGCTGGGGCACATTCGACAGTGACATGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR CCA 90 bp | CCATGCACCCATGGCCCCATCCCCTGGGAGGGACCCTCTGACTATTATTGCACGTCTCCACCAGCTCAATaGCCTGCTTCATCTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PCTHGPIPWEGPSDYYCTSPPAQ*PASSPS Trigger: AGATGGAGATGAAGCAGGCCATTGAGCTGGTGGAGA...CGTGCAATAATAGTCAGAGGGTCCCTCCCAGGGGATGGGGCCATGGGTGCATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR TCA 90 bp | GGCAGAGCTCTGACTGGCATGGGGGACTCAAAGGGTCTGAAAACAAGAGTGCCTTGTGGTAGAAGGCAATaGGCTGGGGCTCTTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRALTGMGDSKGLKTRVPCGRRQ*AGALWS Trigger: GCTCCAAAGAGCCCCAGCTCATTGCCTTCTACCACA...AGGCACTCTTGTTTTCAGACCCTTTGAGTCCCCCATGCCAGTCAGAGCTCTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR GCA 90 bp | GGCAGAGCTCTGACTGGCATGGGGGACTCAAAGGGTCTGAAAACAAGAGTGCCTAGCTCTCCGGGACGATaGTTGAGATGGTGGGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: GRALTGMGDSKGLKTRVPSSPGR*LRWWGS Trigger: TGATCCCCACCATCTCAAGCATCGTCCCGGAGAGCT...AGGCACTCTTGTTTTCAGACCCTTTGAGTCCCCCATGCCAGTCAGAGCTCTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR GCA 90 bp | ATCATGTCACTGTCGAATGTGCCCCAGCGCCCAGCAGAGAAGCTCAGAGACGCCTTTGGAGCGCTCTCCTaGTATCAGGCACTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: IMSLSNVPQRPAEKLRDAFGALS*YQALLH Trigger: GTGAAGAAGTGCCTGATAGCAGGAGAGCGCTCCAAA...GGCGTCTCTGAGCTTCTCTGCTGGGCGCTGGGGCACATTCGACAGTGACATGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR CCA 90 bp | GCAGCCCAGCCGTCCGCCAAATGGATGGATTGGGAAGGCAGTTCTGTAGGAGAGGGACGATGCTTGAGATaGTGGGGATCACATGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: AAQPSAKWMDWEGSSVGEGRCLR*WGSHGN Trigger: GTTTCCATGTGATCCCCACCATCTCAAGCATCGTCC...CTCTCCTACAGAACTGCCTTCCCAATCCATCCATTTGGCGGACGGCTGGGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR CCA 90 bp | ATCATGTCACTGTCGAATGTGCCCCAGCGCCCAGCAGAGAAGCTCAGAGACGCCTCCAGGAACTGTGTGTaGATCTCCTCGTTGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: IMSLSNVPQRPAEKLRDASRNCV*ISSLME Trigger: CTCCATCAACGAGGAGATCCACACACAGTTCCTGGA...GGCGTCTCTGAGCTTCTCTGCTGGGCGCTGGGGCACATTCGACAGTGACATGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR CCA 90 bp | AATCATGTCACTGTCGAATGTGCCCCAGCGCCCAGCAGAGAAGCTCAGAGACGCGTATTCTCTGGGAGCTaGGGCTGTCACTTGATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NHVTVECAPAPSREAQRRVFSGS*GCHLIQ Trigger: CTGGATCAAGTGACAGCCCCAGCTCCCAGAGAATAC...GCGTCTCTGAGCTTCTCTGCTGGGCGCTGGGGCACATTCGACAGTGACATGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR CCA 90 bp | ATCATGTCACTGTCGAATGTGCCCCAGCGCCCAGCAGAGAAGCTCAGAGACGCCCGATGCTTGAGATGGTaGGGATCACATGGAAACCTA | + |
|
Preference number: 4 (lower is better) Translates to: IMSLSNVPQRPAEKLRDARCLRW*GSHGNL Trigger: TAGGTTTCCATGTGATCCCCACCATCTCAAGCATCG...GGCGTCTCTGAGCTTCTCTGCTGGGCGCTGGGGCACATTCGACAGTGACATGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR CCA 90 bp | GGCAGAGCTCTGACTGGCATGGGGGACTCAAAGGGTCTGAAAACAAGAGTGCCTCAGCGTTGTATTCTCTaGGAGCTGGGGCTGTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: GRALTGMGDSKGLKTRVPQRCIL*ELGLSL Trigger: AAGTGACAGCCCCAGCTCCCAGAGAATACAACGCTG...AGGCACTCTTGTTTTCAGACCCTTTGAGTCCCCCATGCCAGTCAGAGCTCTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR TCA 90 bp | ATCATGTCACTGTCGAATGTGCCCCAGCGCCCAGCAGAGAAGCTCAGAGACGCCTCTTCAGGAAGTACTTaGTGGTGGTGTGGGATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: IMSLSNVPQRPAEKLRDASSGST*WWCGIC Trigger: ACAAATCCCACACCACCATCAAGTACTTCCTGAAGA...GGCGTCTCTGAGCTTCTCTGCTGGGCGCTGGGGCACATTCGACAGTGACATGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR GCA 90 bp | TGTGAGCAAAGGCCTCTAGGGGGTCCAGTACTTTCTACTCTACAGAATGCAGGAATGGGATCTTGCCCATaGCTCCGCTCTCCACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CEQRPLGGPVLSTLQNAGMGSCP*LRSPPA Trigger: AGCTGGTGGAGAGCGGAGGCATGGGCAAGATCCCAT...TCCTGCATTCTGTAGAGTAGAAAGTACTGGACCCCCTAGAGGCCTTTGCTCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR TCA 90 bp | CTTTGGTTAGAAATGATGATCAAGGATGGAGAGTTGGTCTGGATGAGGAGGGGCAAGATCCGAGGTGGATaGAATCCCCAGACGCCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LWLEMMIKDGELVWMRRGKIRGG*NPQTPD Trigger: GTCCGGCGTCTGGGGATTTCATCCACCTCGGATCTT...GCCCCTCCTCATCCAGACCAACTCTCCATCCTTGATCATCATTTCTAACCAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR GCA 90 bp | AATCATGTCACTGTCGAATGTGCCCCAGCGCCCAGCAGAGAAGCTCAGAGACGCTGCTCCTCAAGATTTTaGGGATCTCTTCCTCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NHVTVECAPAPSREAQRRCSSRF*GSLPPC Trigger: ACAAGGAGGAAGAGATCCGCAAAATCTTGAGGAGCA...GCGTCTCTGAGCTTCTCTGCTGGGCGCTGGGGCACATTCGACAGTGACATGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR TCA 90 bp | CTTTGGTTAGAAATGATGATCAAGGATGGAGAGTTGGTCTGGATGAGGAGGGGCTCGATGACCCGGATGTaGGAGGTAAATCGGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LWLEMMIKDGELVWMRRGSMTRM*EVNREV Trigger: CACCTCCCGATTTACCTCTCACATCCGGGTCATCGA...GCCCCTCCTCATCCAGACCAACTCTCCATCCTTGATCATCATTTCTAACCAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR GCA 90 bp | TGTGAGCAAAGGCCTCTAGGGGGTCCAGTACTTTCTACTCTACAGAATGCAGGAGGAAGATGTCCGAGATaGCCACAGAGTCATAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CEQRPLGGPVLSTLQNAGGRCPR*PQSHSW Trigger: CCAGCTATGACTCTGTGGGCATCTCGGACATCTTCC...TCCTGCATTCTGTAGAGTAGAAAGTACTGGACCCCCTAGAGGCCTTTGCTCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR CCA 90 bp | GGTCCAGTACTTTCTACTCTACAGAATGCAGGAAAGAGAGTGGTCCAGATAAGGTGGTCATCTGGGCGATaGAGAGGCTCTGATGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GPVLSTLQNAGKRVVQIRWSSGR*RGSDGA Trigger: GGCACCATCAGAGCCTCTCCATCGCCCAGATGACCA...CCTTATCTGGACCACTCTCTTTCCTGCATTCTGTAGAGTAGAAAGTACTGGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR GCA 90 bp | CTTTGGTTAGAAATGATGATCAAGGATGGAGAGTTGGTCTGGATGAGGAGGGGCACAGTGCTGGCAAGATaGGGTCTGAAGTCACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LWLEMMIKDGELVWMRRGTVLAR*GLKSQP Trigger: AGGCTGTGACTTCAGACCGCATCTTGCCAGCACTGT...GCCCCTCCTCATCCAGACCAACTCTCCATCCTTGATCATCATTTCTAACCAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR GCA 90 bp | CTTTGGTTAGAAATGATGATCAAGGATGGAGAGTTGGTCTGGATGAGGAGGGGCAGATCTCAAAGGGTGTaGGCACGTGAGGGTAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LWLEMMIKDGELVWMRRGRSQRV*AREGSQ Trigger: TTGACTACCCTCACGTGCGCACACCCTTTGAGATCT...GCCCCTCCTCATCCAGACCAACTCTCCATCCTTGATCATCATTTCTAACCAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR CCA 90 bp | GGTCCAGTACTTTCTACTCTACAGAATGCAGGAAAGAGAGTGGTCCAGATAAGGGTCACAGCCTTGGGGTaGATGTTCTGCATAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: GPVLSTLQNAGKRVVQIRVTALG*MFCIET Trigger: TGTCTCTATGCAGAACATCCACCCCAAGGCTGTGAC...CCTTATCTGGACCACTCTCTTTCCTGCATTCTGTAGAGTAGAAAGTACTGGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR CAA 90 bp | AGGCTAGCGGGAGAACCGTGGCGCTGCCGTGGGCAGCTCTGCTATGGGTCACGGATGAGCTGGGGCTCTTaGGAGCGCTCTCCTGCTATC | + |
|
Preference number: 5 (lower is better) Translates to: RLAGEPWRCRGQLCYGSRMSWGS*ERSPAI Trigger: GATAGCAGGAGAGCGCTCCAAAGAGCCCCAGCTCAT...CCGTGACCCATAGCAGAGCTGCCCACGGCAGCGCCACGGTTCTCCCGCTAGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS GCA 90 bp | ATGCTGCCAAAGAGCAGGGTGTCCAGCAGGCCAATGTTGTTGATCTaGTCGCCGCCCACCAGGCACACGGCGTACAGGAGGCCACCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: MLPKSRVSSRPMLLI*SPPTRHTAYRRPPR Trigger: CCTGGGTGGCCTCCTGTACGCCGTGTGCCTGGTGGGCGGCGAGCAGATCAACAACATTGGCCTGCTGGACACCCTGCTCTTTGGCAGCAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS GCA 90 bp | TCCCGGGGTGGTTCAGAACCTCTGATGGTGCTGGCAGTAGGGCTGTaGTGGAGGCCGTGGCTCCTGAGAACAGGTAGCAGTCCCACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SRGGSEPLMVLAVGL*WRPWLLRTGSSPTK Trigger: CTTGGTGGGACTGCTACCTGTTCTCAGGAGCCACGGCCTCCAGCACAGCCCTACTGCCAGCACCATCAGAGGTTCTGAACCACCCCGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS CCA 90 bp | CGGGGTGGTTCAGAACCTCTGATGGTGCTGGCAGTAGGGCTGTGCTaGAGGCCGTGGCTCCTGAGAACAGGTAGCAGTCCCACCAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RGGSEPLMVLAVGLC*RPWLLRTGSSPTKA Trigger: TGCCTTGGTGGGACTGCTACCTGTTCTCAGGAGCCACGGCCTCCAGCACAGCCCTACTGCCAGCACCATCAGAGGTTCTGAACCACCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS GCA 90 bp | CGGCTCGATGACCCGGATGTGAGAGGTAAATCGGGAGGTGAAAGCTaGGATTACCCCGTAGACCACGCCCACAAACACCCCACCGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RLDDPDVRGKSGGES*DYPVDHAHKHPTEG Trigger: GCCCTCGGTGGGGTGTTTGTGGGCGTGGTCTACGGGGTAATCGCAGCTTTCACCTCCCGATTTACCTCTCACATCCGGGTCATCGAGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR CAA 90 bp | AGCACCGAGGCTAGCGGGAGAACCGTGGCGCTGCCGTGGGCAGCTCTGCTATGGCGGGTTTTCTGCAGATaGCTCCTCAAGATTTTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: STEASGRTVALPWAALLWRVFCR*LLKILR Trigger: CCGCAAAATCTTGAGGAGCAATCTGCAGAAAACCCG...CCATAGCAGAGCTGCCCACGGCAGCGCCACGGTTCTCCCGCTAGCCTCGGTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR CAA 90 bp | GCAAAGGAGGTACCAGGAGGCCCCCTGCTGGTGAGCTTGAGTCATGACAGGTTGTCCAGCAGGCCAATGTaGTTGATCTGCTCGCCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: AKEVPGGPLLVSLSHDRLSSRPM*LICSPP Trigger: GGGCGGCGAGCAGATCAACAACATTGGCCTGCTGGA...CAACCTGTCATGACTCAAGCTCACCAGCAGGGGGCCTCCTGGTACCTCCTTTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR CAA 90 bp | CAGGTCAGGAGACAAGAGGAGCGCCCAGCCCCCACTCTCGTGGGAGAGTCTGTGTCCTTGGGGGTCAGCTaGACAATGCGGAACTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QVRRQEERPAPTLVGESVSLGVS*TMRNLL Trigger: CAACAAGTTCCGCATTGTCAAGCTGACCCCCAAGGA...CACAGACTCTCCCACGAGAGTGGGGGCTGGGCGCTCCTCTTGTCTCCTGACCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR CAA 90 bp | GGCCTGCTGTCCTCTGATACAGGGGCCCAGTCACGGCCACGGAAGGCTCAGCTCATGATGAACTGGTCCTaGGGGGTCAGCTTGACAATG | + |
|
Preference number: 5 (lower is better) Translates to: GLLSSDTGAQSRPRKAQLMMNWS*GVSLTM Trigger: CATTGTCAAGCTGACCCCCAAGGACCAGTTCATCAT...GAGCTGAGCCTTCCGTGGCCGTGACTGGGCCCCTGTATCAGAGGACAGCAGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR CAA 90 bp | AGGAGACAAGAGGAGCGCCCAGCCCCCACTCTCGTGGGAGAGTCTGTGGGACACTCTTCCTCCTTGTCCTaGGACAGTGCTGGCAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: RRQEERPAPTLVGESVGHSSSLS*DSAGKM Trigger: CATCTTGCCAGCACTGTCCAAGGACAAGGAGGAAGA...GTGTCCCACAGACTCTCCCACGAGAGTGGGGGCTGGGCGCTCCTCTTGTCTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR CAA 90 bp | CCATGCACCCATGGCCCCATCCCCTGGGAGGGACCCTCTGACTATTATTGCACGCGGATCTCTTCCTCCTaGTCCTTGGACAGTGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PCTHGPIPWEGPSDYYCTRISSS*SLDSAG Trigger: GCCAGCACTGTCCAAGGACAAGGAGGAAGAGATCCG...CGTGCAATAATAGTCAGAGGGTCCCTCCCAGGGGATGGGGCCATGGGTGCATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
||
| CDS-3UTR CAA 90 bp | AGGCTAGCGGGAGAACCGTGGCGCTGCCGTGGGCAGCTCTGCTATGGGTCACGGATCTTCAGGAAGTACTaGATGGTGGTGTGGGATTTG | + |
|
Preference number: 5 (lower is better) Translates to: RLAGEPWRCRGQLCYGSRIFRKY*MVVWDL Trigger: CAAATCCCACACCACCATCAAGTACTTCCTGAAGAT...CCGTGACCCATAGCAGAGCTGCCCACGGCAGCGCCACGGTTCTCCCGCTAGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
||
| CDS-3UTR CAA 90 bp | GTAAGGACAGCTCGGGTGGTGGCCAGAGCACCGAGGCTAGCGGGAGAACCGTGGTTGACAATGCGGAACTaGTTGATGAACCAGGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VRTARVVARAPRLAGEPWLTMRN*LMNQVR Trigger: CCTGACCTGGTTCATCAACAAGTTCCGCATTGTCAA...CCACGGTTCTCCCGCTAGCCTCGGTGCTCTGGCCACCACCCGAGCTGTCCTTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS CCA 90 bp | AGCCTTGGGGTGGATGTTCTGCATAGAGACAGTGGAGACAGCAGATaGGATCTTGCCCATGCCTCCGCTCTCCACCAGCTCAATGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLGVDVLHRDSGDSR*DLAHASALHQLNGL Trigger: CAGGCCATTGAGCTGGTGGAGAGCGGAGGCATGGGCAAGATCCCATCTGCTGTCTCCACTGTCTCTATGCAGAACATCCACCCCAAGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR CAA 90 bp | ATCATGTCACTGTCGAATGTGCCCCAGCGCCCAGCAGAGAAGCTCAGAGACGCCATGGTGGTGTGGGATTaGTGGGAGATGTTGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: IMSLSNVPQRPAEKLRDAMVVWD*WEMLAS Trigger: GGAGGCCAACATCTCCCACAAATCCCACACCACCAT...GGCGTCTCTGAGCTTCTCTGCTGGGCGCTGGGGCACATTCGACAGTGACATGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR CAA 90 bp | ATCATGTCACTGTCGAATGTGCCCCAGCGCCCAGCAGAGAAGCTCAGAGACGCCGGGGATGAGGGCTCCTaGCTCCGAATCATGATGATG | + |
|
Preference number: 5 (lower is better) Translates to: IMSLSNVPQRPAEKLRDAGDEGS*LRIMMM Trigger: CATCATCATGATTCGGAGCAAGGAGCCCTCATCCCC...GGCGTCTCTGAGCTTCTCTGCTGGGCGCTGGGGCACATTCGACAGTGACATGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR CAA 90 bp | AATCATGTCACTGTCGAATGTGCCCCAGCGCCCAGCAGAGAAGCTCAGAGACGCTCTCCGGGACGATGCTaGAGATGGTGGGGATCACAT | + |
|
Preference number: 5 (lower is better) Translates to: NHVTVECAPAPSREAQRRSPGRC*RWWGSH Trigger: ATGTGATCCCCACCATCTCAAGCATCGTCCCGGAGA...GCGTCTCTGAGCTTCTCTGCTGGGCGCTGGGGCACATTCGACAGTGACATGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGAGCTCTGACTGGCATGGGGGACTCAAAGGGTCTGAAAACAAGAGTGCCTGTCACTGAGGCAGCGTaGTATTCTCTGGGAGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GRALTGMGDSKGLKTRVPVTEAA*YSLGAG Trigger: CCCAGCTCCCAGAGAATACAACGCTGCCTCAGTGAC...AGGCACTCTTGTTTTCAGACCCTTTGAGTCCCCCATGCCAGTCAGAGCTCTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR CAA 90 bp | GCAGCCCAGCCGTCCGCCAAATGGATGGATTGGGAAGGCAGTTCTGTAGGAGAGACAATGCGGAACTTGTaGATGAACCAGGTCAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: AAQPSAKWMDWEGSSVGETMRNL*MNQVRT Trigger: GGTCCTGACCTGGTTCATCAACAAGTTCCGCATTGT...CTCTCCTACAGAACTGCCTTCCCAATCCATCCATTTGGCGGACGGCTGGGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
||
| CDS-3UTR CAA 90 bp | CCATGCACCCATGGCCCCATCCCCTGGGAGGGACCCTCTGACTATTATTGCACGGGAGCGCTTTGTTTCTaGCTTTTTCTTCACGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: PCTHGPIPWEGPSDYYCTGALCF*LFLHGQ Trigger: TTGGCCGTGAAGAAAAAGCAAGAAACAAAGCGCTCC...CGTGCAATAATAGTCAGAGGGTCCCTCCCAGGGGATGGGGCCATGGGTGCATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
||
| CDS-3UTR CAA 90 bp | CCATGCACCCATGGCCCCATCCCCTGGGAGGGACCCTCTGACTATTATTGCACGTTGCTCCTCAAGATTTaGCGGATCTCTTCCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PCTHGPIPWEGPSDYYCTLLLKI*RISSSL Trigger: CAAGGAGGAAGAGATCCGCAAAATCTTGAGGAGCAA...CGTGCAATAATAGTCAGAGGGTCCCTCCCAGGGGATGGGGCCATGGGTGCATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
||
| CDS TCA 90 bp | GATCTCTTCCTCCTTGTCCTTGGACAGTGCTGGCAAGATGCGGTCTaGAGTCACAGCCTTGGGGTGGATGTTCTGCATAGAGACAGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: DLFLLVLGQCWQDAV*SHSLGVDVLHRDSG Trigger: TCCACTGTCTCTATGCAGAACATCCACCCCAAGGCTGTGACTTCAGACCGCATCTTGCCAGCACTGTCCAAGGACAAGGAGGAAGAGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
||
| CDS GCA 90 bp | GGGCCACCACGAAGAAGCTCAGGAAGCCGAGGAAGATGTCCGAGATaGCCACAGAGTCATAGCTGGCAAATTCCTCAAAGAGGTGATAGA | + |
|
Preference number: 5 (lower is better) Translates to: GPPRRSSGSRGRCPR*PQSHSWQIPQRGDR Trigger: TCTATCACCTCTTTGAGGAATTTGCCAGCTATGACTCTGTGGGCATCTCGGACATCTTCCTCGGCTTCCTGAGCTTCTTCGTGGTGGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS GCA 90 bp | AGGAACTGTGTGTGGATCTCCTCGTTGATGGAGCGCTTTGTTTCTTaGTTTTTCTTCACGGCCAACAGGTCGACCAGGGGCCGAATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RNCVWISSLMERFVS*FFFTANRSTRGRMV Trigger: GACCATTCGGCCCCTGGTCGACCTGTTGGCCGTGAAGAAAAAGCAAGAAACAAAGCGCTCCATCAACGAGGAGATCCACACACAGTTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS GCA 90 bp | TGTCCTTCCAGTGATGGTGGCCATAATGACCACAGATGTCCTCGATaGCTGTCAGAAGGTGGTCCAGGAACTGTGTGTGGATCTCCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: CPSSDGGHNDHRCPR*LSEGGPGTVCGSPR Trigger: ACGAGGAGATCCACACACAGTTCCTGGACCACCTTCTGACAGGCATCGAGGACATCTGTGGTCATTATGGCCACCATCACTGGAAGGACA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS CCA 90 bp | GCAGATTGCTCCTCAAGATTTTGCGGATCTCTTCCTCCTTGTCCTTaGACAGTGCTGGCAAGATGCGGTCTGAAGTCACAGCCTTGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: ADCSSRFCGSLPPCP*TVLARCGLKSQPWG Trigger: ACCCCAAGGCTGTGACTTCAGACCGCATCTTGCCAGCACTGTCCAAGGACAAGGAGGAAGAGATCCGCAAAATCTTGAGGAGCAATCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR CAA 90 bp | GGCAGAGCTCTGACTGGCATGGGGGACTCAAAGGGTCTGAAAACAAGAGTGCCTTCTGAAGTCACAGCCTaGGGGTGGATGTTCTGCATA | + |
|
Preference number: 5 (lower is better) Translates to: GRALTGMGDSKGLKTRVPSEVTA*GWMFCI Trigger: TATGCAGAACATCCACCCCAAGGCTGTGACTTCAGA...AGGCACTCTTGTTTTCAGACCCTTTGAGTCCCCCATGCCAGTCAGAGCTCTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS GCA 90 bp | TGTGTCTGTTATAGGACCGCAGCCGTTGCCGGGTTTTCTGCAGATTaGTCCTCAAGATTTTGCGGATCTCTTCCTCCTTGTCCTTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: CVCYRTAAVAGFSAD*SSRFCGSLPPCPWT Trigger: TGTCCAAGGACAAGGAGGAAGAGATCCGCAAAATCTTGAGGAGCAATCTGCAGAAAACCCGGCAACGGCTGCGGTCCTATAACAGACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
||
| CDS CCA 90 bp | CGAGATGGCTTACCGCCATGTTCAATGATTAAGTTGGTCAAATTGTaGTCATCTGGGCGATGGAGAGGCTCTGATGGTGCCGTGGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: RDGLPPCSMIKLVKL*SSGRWRGSDGAVVT Trigger: TGTCACCACGGCACCATCAGAGCCTCTCCATCGCCCAGATGACCACAATTTGACCAACTTAATCATTGAACATGGCGGTAAGCCATCTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS-3UTR CAA 90 bp | CTTTGGTTAGAAATGATGATCAAGGATGGAGAGTTGGTCTGGATGAGGAGGGGCGTGTGGATCTCCTCGTaGATGGAGCGCTTTGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LWLEMMIKDGELVWMRRGVWISS*MERFVS Trigger: AGAAACAAAGCGCTCCATCAACGAGGAGATCCACAC...GCCCCTCCTCATCCAGACCAACTCTCCATCCTTGATCATCATTTCTAACCAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS GCA 90 bp | CTTGTGGTAGAAGGCAATGAGCTGGGGCTCTTTGGAGCGCTCTCCTaGTATCAGGCACTTCTTCACATACTTCTTATTAAAACGGTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LVVEGNELGLFGALS*YQALLHILLIKTVE Trigger: CTCAACCGTTTTAATAAGAAGTATGTGAAGAAGTGCCTGATAGCAGGAGAGCGCTCCAAAGAGCCCCAGCTCATTGCCTTCTACCACAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS CAA 90 bp | TCCTCCTCCGGAGTCACCCTGGGACCCCGGTTTAGCCCTAGGACCTaGCCCTTCAACTCCTCGTTCACCAGGTCCACAGACTCAGGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SSSGVTLGPRFSPRT*PFNSSFTRSTDSGD Trigger: GTCCCCTGAGTCTGTGGACCTGGTGAACGAGGAGTTGAAGGGCAAGGTCCTAGGGCTAAACCGGGGTCCCAGGGTGACTCCGGAGGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS GCA 72 bp | AAGAGCAGGGTGTCCAGCAGGCCAATGTTGTTGATCTaGTCGCCGCCCACCAGGCACACGGCGTACAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: KSRVSSRPMLLI*SPPTRHTAYRR Trigger: CCTCCTGTACGCCGTGTGCCTGGTGGGCGGCGAGCAGATCAACAACATTGGCCTGCTGGACACCCTGCTCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS CCA 72 bp | CGTCCTCATCTTCCTCCTCCTCCTCCGGAGTCACCCTaGGACCCCGGTTTAGCCCTAGGACCTTGCCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RPHLPPPPPESP*DPGLALGPCPS Trigger: TGAAGGGCAAGGTCCTAGGGCTAAACCGGGGTCCCAGGGTGACTCCGGAGGAGGAGGAGGAAGATGAGGACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS CAA 72 bp | CTGCCAAAGAGCAGGGTGTCCAGCAGGCCAATGTTGTaGATCTGCTCGCCGCCCACCAGGCACACGGCGTAC | + |
|
Preference number: 6 (lower is better) Translates to: LPKSRVSSRPML*ICSPPTRHTAY Trigger: GTACGCCGTGTGCCTGGTGGGCGGCGAGCAGATCAACAACATTGGCCTGCTGGACACCCTGCTCTTTGGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS CAA 72 bp | ATGCTGCCAAAGAGCAGGGTGTCCAGCAGGCCAATGTaGTTGATCTGCTCGCCGCCCACCAGGCACACGGCG | + |
|
Preference number: 6 (lower is better) Translates to: MLPKSRVSSRPM*LICSPPTRHTA Trigger: CGCCGTGTGCCTGGTGGGCGGCGAGCAGATCAACAACATTGGCCTGCTGGACACCCTGCTCTTTGGCAGCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS CAA 90 bp | GAGATGATGCTGCCAAAGAGCAGGGTGTCCAGCAGGCCAATGTTGTaGATCTGCTCGCCGCCCACCAGGCACACGGCGTACAGGAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: EMMLPKSRVSSRPML*ICSPPTRHTAYRRP Trigger: TGGCCTCCTGTACGCCGTGTGCCTGGTGGGCGGCGAGCAGATCAACAACATTGGCCTGCTGGACACCCTGCTCTTTGGCAGCATCATCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS CAA 90 bp | GCAGAGATGATGCTGCCAAAGAGCAGGGTGTCCAGCAGGCCAATGTaGTTGATCTGCTCGCCGCCCACCAGGCACACGGCGTACAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: AEMMLPKSRVSSRPM*LICSPPTRHTAYRR Trigger: CCTCCTGTACGCCGTGTGCCTGGTGGGCGGCGAGCAGATCAACAACATTGGCCTGCTGGACACCCTGCTCTTTGGCAGCATCATCTCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS TCA 72 bp | TGCCAAAGAGCAGGGTGTCCAGCAGGCCAATGTTGTTaGTCTGCTCGCCGCCCACCAGGCACACGGCGTACA | + |
|
Preference number: 6 (lower is better) Translates to: CQRAGCPAGQCC*SARRPPGTRRT Trigger: TGTACGCCGTGTGCCTGGTGGGCGGCGAGCAGATCAACAACATTGGCCTGCTGGACACCCTGCTCTTTGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS CCA 72 bp | GGCAACCACCACCAGCAAGGAGGGGAAGATCCGAGGTaGATGAAATCCCCAGACGCCGGACCACCGAAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: GNHHQQGGEDPR*MKSPDAGPPKH Trigger: ATGCTTCGGTGGTCCGGCGTCTGGGGATTTCATCCACCTCGGATCTTCCCCTCCTTGCTGGTGGTGGTTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS CAA 90 bp | GATCCAGGGGTGAAGACGTCGTCGGTGCCTGGGGATGAGGGCTCCTaGCTCCGAATCATGATGATGCCGTCCTCATCTTCCTCCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: DPGVKTSSVPGDEGS*LRIMMMPSSSSSSS Trigger: GGAGGAGGAGGAAGATGAGGACGGCATCATCATGATTCGGAGCAAGGAGCCCTCATCCCCAGGCACCGACGACGTCTTCACCCCTGGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS GCA 72 bp | GGTTCAGAACCTCTGATGGTGCTGGCAGTAGGGCTGTaGTGGAGGCCGTGGCTCCTGAGAACAGGTAGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: GSEPLMVLAVGL*WRPWLLRTGSS Trigger: ACTGCTACCTGTTCTCAGGAGCCACGGCCTCCAGCACAGCCCTACTGCCAGCACCATCAGAGGTTCTGAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS CCA 72 bp | GGGTGTGCGCACGTGAGGGTAGTCAATGTCCAGGACTaGGAAGGCCTTCCGAGATGGCTTACCGCCATGTTC | + |
|
Preference number: 6 (lower is better) Translates to: GCAHVRVVNVQD*EGLPRWLTAMF Trigger: GAACATGGCGGTAAGCCATCTCGGAAGGCCTTCCCAGTCCTGGACATTGACTACCCTCACGTGCGCACACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS TCA 72 bp | CCACAGCAAAGATCAGGATGGTGCCCAGGTTCTCCGTaGACTGCCGCAGAGGCAGGAAGTAGCCTGCATCCA | + |
|
Preference number: 6 (lower is better) Translates to: PQQRSGWCPGSP*TAAEAGSSLHP Trigger: TGGATGCAGGCTACTTCCTGCCTCTGCGGCAGTTCACGGAGAACCTGGGCACCATCCTGATCTTTGCTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS TCA 72 bp | GATGTTGGCCTCCACATAGGGGCGCATCACTACTCCTaGGGCGATGAGGGCCATGATTCCGGACAGGTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: DVGLHIGAHHYS*GDEGHDSGQVE Trigger: TTCCACCTGTCCGGAATCATGGCCCTCATCGCCTCAGGAGTAGTGATGCGCCCCTATGTGGAGGCCAACATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS GCA 72 bp | GACCCGGATGTGAGAGGTAAATCGGGAGGTGAAAGCTaGGATTACCCCGTAGACCACGCCCACAAACACCCC | + |
|
Preference number: 6 (lower is better) Translates to: DPDVRGKSGGES*DYPVDHAHKHP Trigger: GGGGTGTTTGTGGGCGTGGTCTACGGGGTAATCGCAGCTTTCACCTCCCGATTTACCTCTCACATCCGGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS CAA 72 bp | GTGAAGACGTCGTCGGTGCCTGGGGATGAGGGCTCCTaGCTCCGAATCATGATGATGCCGTCCTCATCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: VKTSSVPGDEGS*LRIMMMPSSSS Trigger: GGAAGATGAGGACGGCATCATCATGATTCGGAGCAAGGAGCCCTCATCCCCAGGCACCGACGACGTCTTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS CAA 90 bp | ATGATGAACTGGTCCTTGGGGGTCAGCTTGACAATGCGGAACTTGTaGATGAACCAGGTCAGGACCAGGACACCCAGCACCCGGGCGATG | + |
|
Preference number: 6 (lower is better) Translates to: MMNWSLGVSLTMRNL*MNQVRTRTPSTRAM Trigger: CATCGCCCGGGTGCTGGGTGTCCTGGTCCTGACCTGGTTCATCAACAAGTTCCGCATTGTCAAGCTGACCCCCAAGGACCAGTTCATCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS CAA 90 bp | GGGTGGATGTTCTGCATAGAGACAGTGGAGACAGCAGATGGGATCTaGCCCATGCCTCCGCTCTCCACCAGCTCAATGGCCTGCTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: GWMFCIETVETADGI*PMPPLSTSSMACFI Trigger: GATGAAGCAGGCCATTGAGCTGGTGGAGAGCGGAGGCATGGGCAAGATCCCATCTGCTGTCTCCACTGTCTCTATGCAGAACATCCACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS GCA 72 bp | AGGCCAGGAGAATCCAGAGGGAGATCTCAAAGGGTGTaGGCACGTGAGGGTAGTCAATGTCCAGGACTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: RPGESRGRSQRV*AREGSQCPGLG Trigger: TCCCAGTCCTGGACATTGACTACCCTCACGTGCGCACACCCTTTGAGATCTCCCTCTGGATTCTCCTGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS CAA 72 bp | TGGTCCTTGGGGGTCAGCTTGACAATGCGGAACTTGTaGATGAACCAGGTCAGGACCAGGACACCCAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: WSLGVSLTMRNL*MNQVRTRTPST Trigger: GGTGCTGGGTGTCCTGGTCCTGACCTGGTTCATCAACAAGTTCCGCATTGTCAAGCTGACCCCCAAGGACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS CAA 72 bp | AACTGGTCCTTGGGGGTCAGCTTGACAATGCGGAACTaGTTGATGAACCAGGTCAGGACCAGGACACCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: NWSLGVSLTMRN*LMNQVRTRTPS Trigger: GCTGGGTGTCCTGGTCCTGACCTGGTTCATCAACAAGTTCCGCATTGTCAAGCTGACCCCCAAGGACCAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
||
| CDS CAA 90 bp | TTGTCCTTGGACAGTGCTGGCAAGATGCGGTCTGAAGTCACAGCCTaGGGGTGGATGTTCTGCATAGAGACAGTGGAGACAGCAGATGGG | + |
|
Preference number: 6 (lower is better) Translates to: LSLDSAGKMRSEVTA*GWMFCIETVETADG Trigger: CCCATCTGCTGTCTCCACTGTCTCTATGCAGAACATCCACCCCAAGGCTGTGACTTCAGACCGCATCTTGCCAGCACTGTCCAAGGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
||
| CDS CAA 90 bp | GACCGCAGCCGTTGCCGGGTTTTCTGCAGATTGCTCCTCAAGATTTaGCGGATCTCTTCCTCCTTGTCCTTGGACAGTGCTGGCAAGATG | + |
|
Preference number: 6 (lower is better) Translates to: DRSRCRVFCRLLLKI*RISSSLSLDSAGKM Trigger: CATCTTGCCAGCACTGTCCAAGGACAAGGAGGAAGAGATCCGCAAAATCTTGAGGAGCAATCTGCAGAAAACCCGGCAACGGCTGCGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
||
| CDS TCA 72 bp | GAGGGCCATGATTCCGGACAGGTGGAAGAGCTCAGCTaGCAGGTAAGCCATGTAGCTGTAGAGGAAGACGAA | + |
|
Preference number: 6 (lower is better) Translates to: EGHDSGQVEELS*QVSHVAVEEDE Trigger: TTCGTCTTCCTCTACAGCTACATGGCTTACCTGTCAGCTGAGCTCTTCCACCTGTCCGGAATCATGGCCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
||
| CDS TCA 72 bp | CTCCTTGTCCTTGGACAGTGCTGGCAAGATGCGGTCTaGAGTCACAGCCTTGGGGTGGATGTTCTGCATAGA | + |
|
Preference number: 6 (lower is better) Translates to: LLVLGQCWQDAV*SHSLGVDVLHR Trigger: TCTATGCAGAACATCCACCCCAAGGCTGTGACTTCAGACCGCATCTTGCCAGCACTGTCCAAGGACAAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
||
| CDS GCA 72 bp | GTGTGGATCTCCTCGTTGATGGAGCGCTTTGTTTCTTaGTTTTTCTTCACGGCCAACAGGTCGACCAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: VWISSLMERFVS*FFFTANRSTRG Trigger: GCCCCTGGTCGACCTGTTGGCCGTGAAGAAAAAGCAAGAAACAAAGCGCTCCATCAACGAGGAGATCCACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
||
| CDS CAA 72 bp | GACAGTGCTGGCAAGATGCGGTCTGAAGTCACAGCCTaGGGGTGGATGTTCTGCATAGAGACAGTGGAGACA | + |
|
Preference number: 6 (lower is better) Translates to: DSAGKMRSEVTA*GWMFCIETVET Trigger: TGTCTCCACTGTCTCTATGCAGAACATCCACCCCAAGGCTGTGACTTCAGACCGCATCTTGCCAGCACTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS CAA 72 bp | GGCCACCAGCGTGTGTCTGTTATAGGACCGCAGCCGTaGCCGGGTTTTCTGCAGATTGCTCCTCAAGATTTT | + |
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Preference number: 6 (lower is better) Translates to: GHQRVSVIGPQP*PGFLQIAPQDF Trigger: AAAATCTTGAGGAGCAATCTGCAGAAAACCCGGCAACGGCTGCGGTCCTATAACAGACACACGCTGGTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS CAA 90 bp | CAGGAACTGTGTGTGGATCTCCTCGTTGATGGAGCGCTTTGTTTCTaGCTTTTTCTTCACGGCCAACAGGTCGACCAGGGGCCGAATGGT | + |
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Preference number: 6 (lower is better) Translates to: QELCVDLLVDGALCF*LFLHGQQVDQGPNG Trigger: ACCATTCGGCCCCTGGTCGACCTGTTGGCCGTGAAGAAAAAGCAAGAAACAAAGCGCTCCATCAACGAGGAGATCCACACACAGTTCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS CAA 90 bp | TGCAGATTGCTCCTCAAGATTTTGCGGATCTCTTCCTCCTTGTCCTaGGACAGTGCTGGCAAGATGCGGTCTGAAGTCACAGCCTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: CRLLLKILRISSSLS*DSAGKMRSEVTALG Trigger: CCCCAAGGCTGTGACTTCAGACCGCATCTTGCCAGCACTGTCCAAGGACAAGGAGGAAGAGATCCGCAAAATCTTGAGGAGCAATCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS GCA 72 bp | AGTGATGGTGGCCATAATGACCACAGATGTCCTCGATaGCTGTCAGAAGGTGGTCCAGGAACTGTGTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: SDGGHNDHRCPR*LSEGGPGTVCG Trigger: TCCACACACAGTTCCTGGACCACCTTCTGACAGGCATCGAGGACATCTGTGGTCATTATGGCCACCATCACT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS CAA 72 bp | TGTGTGGATCTCCTCGTTGATGGAGCGCTTTGTTTCTaGCTTTTTCTTCACGGCCAACAGGTCGACCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: CVDLLVDGALCF*LFLHGQQVDQG Trigger: CCCCTGGTCGACCTGTTGGCCGTGAAGAAAAAGCAAGAAACAAAGCGCTCCATCAACGAGGAGATCCACACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS CAA 90 bp | TTCCGAGATGGCTTACCGCCATGTTCAATGATTAAGTTGGTCAAATaGTGGTCATCTGGGCGATGGAGAGGCTCTGATGGTGCCGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: FRDGLPPCSMIKLVK*WSSGRWRGSDGAVV Trigger: CACCACGGCACCATCAGAGCCTCTCCATCGCCCAGATGACCACAATTTGACCAACTTAATCATTGAACATGGCGGTAAGCCATCTCGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS CAA 90 bp | GTTTTCTGCAGATTGCTCCTCAAGATTTTGCGGATCTCTTCCTCCTaGTCCTTGGACAGTGCTGGCAAGATGCGGTCTGAAGTCACAGCC | + |
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Preference number: 6 (lower is better) Translates to: VFCRLLLKILRISSS*SLDSAGKMRSEVTA Trigger: GGCTGTGACTTCAGACCGCATCTTGCCAGCACTGTCCAAGGACAAGGAGGAAGAGATCCGCAAAATCTTGAGGAGCAATCTGCAGAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS GCA 72 bp | CGAAGAAGCTCAGGAAGCCGAGGAAGATGTCCGAGATaGCCACAGAGTCATAGCTGGCAAATTCCTCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: RRSSGSRGRCPR*PQSHSWQIPQR Trigger: TCTTTGAGGAATTTGCCAGCTATGACTCTGTGGGCATCTCGGACATCTTCCTCGGCTTCCTGAGCTTCTTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS GCA 72 bp | TATAGGACCGCAGCCGTTGCCGGGTTTTCTGCAGATTaGTCCTCAAGATTTTGCGGATCTCTTCCTCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: YRTAAVAGFSAD*SSRFCGSLPPC Trigger: ACAAGGAGGAAGAGATCCGCAAAATCTTGAGGAGCAATCTGCAGAAAACCCGGCAACGGCTGCGGTCCTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS CCA 72 bp | ATGATTAAGTTGGTCAAATTGTGGTCATCTGGGCGATaGAGAGGCTCTGATGGTGCCGTGGTGACATCCCCA | + |
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Preference number: 6 (lower is better) Translates to: MIKLVKLWSSGR*RGSDGAVVTSP Trigger: TGGGGATGTCACCACGGCACCATCAGAGCCTCTCCATCGCCCAGATGACCACAATTTGACCAACTTAATCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS CCA 72 bp | TCCTCAAGATTTTGCGGATCTCTTCCTCCTTGTCCTTaGACAGTGCTGGCAAGATGCGGTCTGAAGTCACAG | + |
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Preference number: 6 (lower is better) Translates to: SSRFCGSLPPCP*TVLARCGLKSQ Trigger: CTGTGACTTCAGACCGCATCTTGCCAGCACTGTCCAAGGACAAGGAGGAAGAGATCCGCAAAATCTTGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS CAA 72 bp | CTCCTCAAGATTTTGCGGATCTCTTCCTCCTTGTCCTaGGACAGTGCTGGCAAGATGCGGTCTGAAGTCACA | + |
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Preference number: 6 (lower is better) Translates to: LLKILRISSSLS*DSAGKMRSEVT Trigger: TGTGACTTCAGACCGCATCTTGCCAGCACTGTCCAAGGACAAGGAGGAAGAGATCCGCAAAATCTTGAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS TCA 72 bp | GAAGGTGGTCCAGGAACTGTGTGTGGATCTCCTCGTTaGTGGAGCGCTTTGTTTCTTGCTTTTTCTTCACGG | + |
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Preference number: 6 (lower is better) Translates to: EGGPGTVCGSPR*WSALFLAFSSR Trigger: CCGTGAAGAAAAAGCAAGAAACAAAGCGCTCCATCAACGAGGAGATCCACACACAGTTCCTGGACCACCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS CAA 72 bp | AGATTGCTCCTCAAGATTTTGCGGATCTCTTCCTCCTaGTCCTTGGACAGTGCTGGCAAGATGCGGTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: RLLLKILRISSS*SLDSAGKMRSE Trigger: TTCAGACCGCATCTTGCCAGCACTGTCCAAGGACAAGGAGGAAGAGATCCGCAAAATCTTGAGGAGCAATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS CCA 72 bp | TTACCGCCATGTTCAATGATTAAGTTGGTCAAATTGTaGTCATCTGGGCGATGGAGAGGCTCTGATGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: LPPCSMIKLVKL*SSGRWRGSDGA Trigger: GGCACCATCAGAGCCTCTCCATCGCCCAGATGACCACAATTTGACCAACTTAATCATTGAACATGGCGGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS CAA 72 bp | GGCTTACCGCCATGTTCAATGATTAAGTTGGTCAAATaGTGGTCATCTGGGCGATGGAGAGGCTCTGATGGT | + |
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Preference number: 6 (lower is better) Translates to: GLPPCSMIKLVK*WSSGRWRGSDG Trigger: ACCATCAGAGCCTCTCCATCGCCCAGATGACCACAATTTGACCAACTTAATCATTGAACATGGCGGTAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS CAA 72 bp | AGAAGGTGGTCCAGGAACTGTGTGTGGATCTCCTCGTaGATGGAGCGCTTTGTTTCTTGCTTTTTCTTCACG | + |
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Preference number: 6 (lower is better) Translates to: RRWSRNCVWISS*MERFVSCFFFT Trigger: CGTGAAGAAAAAGCAAGAAACAAAGCGCTCCATCAACGAGGAGATCCACACACAGTTCCTGGACCACCTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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| CDS GCA 72 bp | GAAGGCAATGAGCTGGGGCTCTTTGGAGCGCTCTCCTaGTATCAGGCACTTCTTCACATACTTCTTATTAAA | + |
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Preference number: 6 (lower is better) Translates to: EGNELGLFGALS*YQALLHILLIK Trigger: TTTAATAAGAAGTATGTGAAGAAGTGCCTGATAGCAGGAGAGCGCTCCAAAGAGCCCCAGCTCATTGCCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030669.8 |
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