RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC8A2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030376

Ensembl transcript IDs: ENSMUST00000168693.3, ENSMUST00000211649.2

Found 332 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAAGGGAGCTCCCTGAGGGTTGGGGTGGTTAAGGGCAGAGATGGATaGCGTCCTGGGATGGCACAGCCTCCCTCTGAGGTACCTAGGGAG +
Preference number: 1 (lower is better)
Translates to: QGSSLRVGVVKGRDG*RPGMAQPPSEVPRE
Trigger: CTCCCTAGGTACCTCAGAGGGAGGCTGTGCCATCCCAGGACGCCATCCATCTCTGCCCTTAACCACCCCAACCCTCAGGGAGCTCCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR TCA 90 bp CCCAGGAAGAAGGCTGAGGAGGAAGAGCCTAGGGAGCGCCCAGGCTaGGTCTGGGTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACC +
Preference number: 1 (lower is better)
Translates to: PRKKAEEEEPRERPG*VWVERLVGPRANAT
Trigger: GGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTACCCAGACTCAGCCTGGGCGCTCCCTAGGCTCTTCCTCCTCAGCCTTCTTCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR GCA 90 bp TGCAAAGGCTGCCGGGTCTGTTTCCTGTGGTCTAGATGTCGGAGCTaGTACCATCCCTTTCCTCCTGCACCCCAACTTCCCACGGGAGGA +
Preference number: 1 (lower is better)
Translates to: CKGCRVCFLWSRCRS*YHPFPPAPQLPTGG
Trigger: TCCTCCCGTGGGAAGTTGGGGTGCAGGAGGAAAGGGATGGTAGCAGCTCCGACATCTAGACCACAGGAAACAGACCCGGCAGCCTTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
3UTR TCA 90 bp TGGGGGACAGATACTCCAAACGTCCCTCCTCCATCTCCAAGCCTCTaGGTGGATAAATCAGGGAAGGTGCGTGCCTTTCTCCCTGCTCCC +
Preference number: 1 (lower is better)
Translates to: WGTDTPNVPPPSPSL*VDKSGKVRAFLPAP
Trigger: GGGAGCAGGGAGAAAGGCACGCACCTTCCCTGATTTATCCACTCAGAGGCTTGGAGATGGAGGAGGGACGTTTGGAGTATCTGTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR CCA 90 bp GGGCGCTGGAATGTCAGAAGTAGTGGGTTCAAGATGTGCCTCCTCTaGCTAAGCCTGGGGGACAGATACTCCAAACGTCCCTCCTCCATC +
Preference number: 1 (lower is better)
Translates to: GRWNVRSSGFKMCLL*LSLGDRYSKRPSSI
Trigger: GATGGAGGAGGGACGTTTGGAGTATCTGTCCCCCAGGCTTAGCCAGAGGAGGCACATCTTGAACCCACTACTTCTGACATTCCAGCGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR GCA 90 bp TCCCTCCTCCATCTCCAAGCCTCTGAGTGGATAAATCAGGGAAGGTaGGTGCCTTTCTCCCTGCTCCCCGCACAAACCCCTATTCCTTTC +
Preference number: 1 (lower is better)
Translates to: SLLHLQASEWINQGR*VPFSLLPAQTPIPF
Trigger: GAAAGGAATAGGGGTTTGTGCGGGGAGCAGGGAGAAAGGCACGCACCTTCCCTGATTTATCCACTCAGAGGCTTGGAGATGGAGGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR GCA 90 bp GTCTCAGTCTCATCCACTAAGCTGGTTCTCAGGCTGAGTGAGTCCTaGTGCCCTCTCAGAAGGGAAAGTCTGTCAACGCCCCTTTCCCCA +
Preference number: 1 (lower is better)
Translates to: VSVSSTKLVLRLSES*CPLRRESLSTPLSP
Trigger: TGGGGAAAGGGGCGTTGACAGACTTTCCCTTCTGAGAGGGCAGCAGGACTCACTCAGCCTGAGAACCAGCTTAGTGGATGAGACTGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR TCA 90 bp GCTCCCTTTGAGTCTCAGTCTCATCCACTAAGCTGGTTCTCAGGCTaGGTGAGTCCTGCTGCCCTCTCAGAAGGGAAAGTCTGTCAACGC +
Preference number: 1 (lower is better)
Translates to: APFESQSHPLSWFSG*VSPAALSEGKVCQR
Trigger: GCGTTGACAGACTTTCCCTTCTGAGAGGGCAGCAGGACTCACTCAGCCTGAGAACCAGCTTAGTGGATGAGACTGAGACTCAAAGGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR GCA 90 bp TCAGTCTCATCCACTAAGCTGGTTCTCAGGCTGAGTGAGTCCTGCTaGCCTCTCAGAAGGGAAAGTCTGTCAACGCCCCTTTCCCCAAGA +
Preference number: 1 (lower is better)
Translates to: SVSSTKLVLRLSESC*PLRRESLSTPLSPR
Trigger: TCTTGGGGAAAGGGGCGTTGACAGACTTTCCCTTCTGAGAGGGCAGCAGGACTCACTCAGCCTGAGAACCAGCTTAGTGGATGAGACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR CCA 90 bp CTGGTAACATTGAATGTGGTTAGCGTATGCTGGTGTCCTGCTGTCTaGCCAACTCTAATGCAAAGGCTGCCGGGTCTGTTTCCTGTGGTC +
Preference number: 1 (lower is better)
Translates to: LVTLNVVSVCWCPAV*PTLMQRLPGLFPVV
Trigger: GACCACAGGAAACAGACCCGGCAGCCTTTGCATTAGAGTTGGCCAGACAGCAGGACACCAGCATACGCTAACCACATTCAATGTTACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
3UTR TCA 90 bp GAAACCACAGAGAAGGGACATCAAGTGATGCTGATGAGCAAGGGGTaGGAAGGGCCGTGGGTAATGGGTCTGATGCACAAATGGACAAGA +
Preference number: 1 (lower is better)
Translates to: ETTEKGHQVMLMSKG*EGPWVMGLMHKWTR
Trigger: TCTTGTCCATTTGTGCATCAGACCCATTACCCACGGCCCTTCTCACCCCTTGCTCATCAGCATCACTTGATGTCCCTTCTCTGTGGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR GCA 90 bp AGTACTAGAAACCAATGGCTAATGGGCAGGGGTGAAACTAGTAGATaGTCTTGGCTAATGGGTAAGGCGTGGTACCAGAAGCCTATGGCT +
Preference number: 1 (lower is better)
Translates to: STRNQWLMGRGETSR*SWLMGKAWYQKPMA
Trigger: AGCCATAGGCTTCTGGTACCACGCCTTACCCATTAGCCAAGAGCATCTACTAGTTTCACCCCTGCCCATTAGCCATTGGTTTCTAGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
3UTR CCA 90 bp AGTACTTTCGTTAACCCTTCTAGAATACTGTCAGGGGAGGTCAGGTaGGCTCCCTTTGAGTCTCAGTCTCATCCACTAAGCTGGTTCTCA +
Preference number: 1 (lower is better)
Translates to: STFVNPSRILSGEVR*APFESQSHPLSWFS
Trigger: TGAGAACCAGCTTAGTGGATGAGACTGAGACTCAAAGGGAGCCCACCTGACCTCCCCTGACAGTATTCTAGAAGGGTTAACGAAAGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR GCA 90 bp AACCTCAGCTCCCTCTGGCTCAGGCAAATTAGAGTCCTTCTCTTTTaGAATCCCACAATATCCTATGAAGAGGAACCATTTGTGGCTGGT +
Preference number: 1 (lower is better)
Translates to: NLSSLWLRQIRVLLF*NPTISYEEEPFVAG
Trigger: ACCAGCCACAAATGGTTCCTCTTCATAGGATATTGTGGGATTGCAAAAGAGAAGGACTCTAATTTGCCTGAGCCAGAGGGAGCTGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
3UTR CCA 90 bp TGGAGGCTCATGATTGATGGGTGGAACATCAGTACTAGAAACCAATaGCTAATGGGCAGGGGTGAAACTAGTAGATGCTCTTGGCTAATG +
Preference number: 1 (lower is better)
Translates to: WRLMIDGWNISTRNQ*LMGRGETSRCSWLM
Trigger: CATTAGCCAAGAGCATCTACTAGTTTCACCCCTGCCCATTAGCCATTGGTTTCTAGTACTGATGTTCCACCCATCAATCATGAGCCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
3UTR CCA 90 bp AGTGACCTATTTTATTTAGGAAACTTCATCAACCTCAGCTCCCTCTaGCTCAGGCAAATTAGAGTCCTTCTCTTTTGCAATCCCACAATA +
Preference number: 1 (lower is better)
Translates to: SDLFYLGNFINLSSL*LRQIRVLLFCNPTI
Trigger: TATTGTGGGATTGCAAAAGAGAAGGACTCTAATTTGCCTGAGCCAGAGGGAGCTGAGGTTGATGAAGTTTCCTAAATAAAATAGGTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
3UTR-3UTR TCA 90 bp GGAAAGCAGAAGGCTGTGAGGGTGGCAGGGTCACCTAAGGTCGCAAGGAGTGGGAGGGAGCGCCCAGGCTaGGTCTGGGTAGAGAGACTG +
Preference number: 2 (lower is better)
Translates to: GKQKAVRVAGSPKVARSGRERPG*VWVERL
Trigger: CAGTCTCTCTACCCAGACTCAGCCTGGGCGCTCCCT...CCCACTCCTTGCGACCTTAGGTGACCCTGCCACCCTCACAGCCTTCTGCTTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR-3UTR GCA 90 bp CACACAGGCTCCTCCCTCCAAGGCGTGGCTAGGCTCTCAGAGGTAGTGGAGGGTGGGTCCAAGAGCAAATaGCACCAAGTCCCCACCCTC +
Preference number: 2 (lower is better)
Translates to: HTGSSLQGVARLSEVVEGGSKSK*HQVPTL
Trigger: GAGGGTGGGGACTTGGTGGCATTTGCTCTTGGACCC...ACCCTCCACTACCTCTGAGAGCCTAGCCACGCCTTGGAGGGAGGAGCCTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR-3UTR CCA 90 bp GGAAAGCAGAAGGCTGTGAGGGTGGCAGGGTCACCTAAGGTCGCAAGGAGTGGGAAGGGCAGAGATGGATaGCGTCCTGGGATGGCACAG +
Preference number: 2 (lower is better)
Translates to: GKQKAVRVAGSPKVARSGKGRDG*RPGMAQ
Trigger: CTGTGCCATCCCAGGACGCCATCCATCTCTGCCCTT...CCCACTCCTTGCGACCTTAGGTGACCCTGCCACCCTCACAGCCTTCTGCTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR-3UTR CCA 90 bp CACACAGGCTCCTCCCTCCAAGGCGTGGCTAGGCTCTCAGAGGTAGTGGAGGGTAAGATGTGCCTCCTCTaGCTAAGCCTGGGGGACAGA +
Preference number: 2 (lower is better)
Translates to: HTGSSLQGVARLSEVVEGKMCLL*LSLGDR
Trigger: TCTGTCCCCCAGGCTTAGCCAGAGGAGGCACATCTT...ACCCTCCACTACCTCTGAGAGCCTAGCCACGCCTTGGAGGGAGGAGCCTGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR-3UTR CCA 90 bp GGAAAGCAGAAGGCTGTGAGGGTGGCAGGGTCACCTAAGGTCGCAAGGAGTGGGTCAGGGGAGGTCAGGTaGGCTCCCTTTGAGTCTCAG +
Preference number: 2 (lower is better)
Translates to: GKQKAVRVAGSPKVARSGSGEVR*APFESQ
Trigger: CTGAGACTCAAAGGGAGCCCACCTGACCTCCCCTGA...CCCACTCCTTGCGACCTTAGGTGACCCTGCCACCCTCACAGCCTTCTGCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR-3UTR TCA 90 bp GGAAAGCAGAAGGCTGTGAGGGTGGCAGGGTCACCTAAGGTCGCAAGGAGTGGGTGGAAGTTCGTGGCTTaGGGGAGGGACACGAGAAGA +
Preference number: 2 (lower is better)
Translates to: GKQKAVRVAGSPKVARSGWKFVA*GRDTRR
Trigger: TCTTCTCGTGTCCCTCCCTCAAGCCACGAACTTCCA...CCCACTCCTTGCGACCTTAGGTGACCCTGCCACCCTCACAGCCTTCTGCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR-3UTR TCA 90 bp GGAAAGCAGAAGGCTGTGAGGGTGGCAGGGTCACCTAAGGTCGCAAGGAGTGGGCAGGTGGGCTCCCTTTaGGTCTCAGTCTCATCCACT +
Preference number: 2 (lower is better)
Translates to: GKQKAVRVAGSPKVARSGQVGSL*VSVSST
Trigger: AGTGGATGAGACTGAGACTCAAAGGGAGCCCACCTG...CCCACTCCTTGCGACCTTAGGTGACCCTGCCACCCTCACAGCCTTCTGCTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR-3UTR CCA 90 bp GGAAAGCAGAAGGCTGTGAGGGTGGCAGGGTCACCTAAGGTCGCAAGGAGTGGGACAGGTGGAAGTTCGTaGCTTGAGGGAGGGACACGA +
Preference number: 2 (lower is better)
Translates to: GKQKAVRVAGSPKVARSGTGGSS*LEGGTR
Trigger: TCGTGTCCCTCCCTCAAGCCACGAACTTCCACCTGT...CCCACTCCTTGCGACCTTAGGTGACCCTGCCACCCTCACAGCCTTCTGCTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR-3UTR CCA 90 bp ATGTGCCTCCTCTGGCTAAGCCTGGGGGACAGATACTCCAAACGTCCCTCCTCCCCCTATTCCTTTCCCTaGGGACTGCAAGGGAGCTCC +
Preference number: 2 (lower is better)
Translates to: MCLLWLSLGDRYSKRPSSPYSFP*GLQGSS
Trigger: GGAGCTCCCTTGCAGTCCCCAGGGAAAGGAATAGGG...GGAGGAGGGACGTTTGGAGTATCTGTCCCCCAGGCTTAGCCAGAGGAGGCACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR-3UTR TCA 90 bp AGTGATGCTGATGAGCAAGGGGTGAGAAGGGCCGTGGGTAATGGGTCTGATGCATGCAAGGGAGCTCCCTaGGGGTTGGGGTGGTTAAGG +
Preference number: 2 (lower is better)
Translates to: SDADEQGVRRAVGNGSDACKGAP*GLGWLR
Trigger: CCTTAACCACCCCAACCCTCAGGGAGCTCCCTTGCA...TGCATCAGACCCATTACCCACGGCCCTTCTCACCCCTTGCTCATCAGCATCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR-3UTR TCA 90 bp AGTGATGCTGATGAGCAAGGGGTGAGAAGGGCCGTGGGTAATGGGTCTGATGCAGGTTCTCAGGCTGAGTaGGTCCTGCTGCCCTCTCAG +
Preference number: 2 (lower is better)
Translates to: SDADEQGVRRAVGNGSDAGSQAE*VLLPSQ
Trigger: CTGAGAGGGCAGCAGGACTCACTCAGCCTGAGAACC...TGCATCAGACCCATTACCCACGGCCCTTCTCACCCCTTGCTCATCAGCATCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR-3UTR TCA 90 bp CTGTCAGGGGAGGTCAGGTGGGCTCCCTTTGAGTCTCAGTCTCATCCACTAAGCTGGAAGTTCGTGGCTTaGGGGAGGGACACGAGAAGA +
Preference number: 2 (lower is better)
Translates to: LSGEVRWAPFESQSHPLSWKFVA*GRDTRR
Trigger: TCTTCTCGTGTCCCTCCCTCAAGCCACGAACTTCCA...GCTTAGTGGATGAGACTGAGACTCAAAGGGAGCCCACCTGACCTCCCCTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR-3UTR TCA 90 bp GCAAAGGCTGCCGGGTCTGTTTCCTGTGGTCTAGATGTCGGAGCTGCTACCATCCAGGTGGGCTCCCTTTaGGTCTCAGTCTCATCCACT +
Preference number: 2 (lower is better)
Translates to: AKAAGSVSCGLDVGAATIQVGSL*VSVSST
Trigger: AGTGGATGAGACTGAGACTCAAAGGGAGCCCACCTG...GATGGTAGCAGCTCCGACATCTAGACCACAGGAAACAGACCCGGCAGCCTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
3UTR-3UTR GCA 90 bp CTGTCAGGGGAGGTCAGGTGGGCTCCCTTTGAGTCTCAGTCTCATCCACTAAGCAGGCTGAGTGAGTCCTaGTGCCCTCTCAGAAGGGAA +
Preference number: 2 (lower is better)
Translates to: LSGEVRWAPFESQSHPLSRLSES*CPLRRE
Trigger: TTCCCTTCTGAGAGGGCAGCAGGACTCACTCAGCCT...GCTTAGTGGATGAGACTGAGACTCAAAGGGAGCCCACCTGACCTCCCCTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR-3UTR CCA 90 bp AGTGATGCTGATGAGCAAGGGGTGAGAAGGGCCGTGGGTAATGGGTCTGATGCAAGGGAGGGCAAAGGATaGGATTCCAGGGGGAAAGGG +
Preference number: 2 (lower is better)
Translates to: SDADEQGVRRAVGNGSDAREGKG*DSRGKG
Trigger: CCCTTTCCCCCTGGAATCCCATCCTTTGCCCTCCCT...TGCATCAGACCCATTACCCACGGCCCTTCTCACCCCTTGCTCATCAGCATCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR-3UTR CCA 90 bp GGAAAGCAGAAGGCTGTGAGGGTGGCAGGGTCACCTAAGGTCGCAAGGAGTGGGCTCCAAGCCTCTGAGTaGATAAATCAGGGAAGGTGC +
Preference number: 2 (lower is better)
Translates to: GKQKAVRVAGSPKVARSGLQASE*INQGRC
Trigger: GCACCTTCCCTGATTTATCCACTCAGAGGCTTGGAG...CCCACTCCTTGCGACCTTAGGTGACCCTGCCACCCTCACAGCCTTCTGCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR-3UTR CCA 90 bp AGTGATGCTGATGAGCAAGGGGTGAGAAGGGCCGTGGGTAATGGGTCTGATGCAACAGGTGGAAGTTCGTaGCTTGAGGGAGGGACACGA +
Preference number: 2 (lower is better)
Translates to: SDADEQGVRRAVGNGSDATGGSS*LEGGTR
Trigger: TCGTGTCCCTCCCTCAAGCCACGAACTTCCACCTGT...TGCATCAGACCCATTACCCACGGCCCTTCTCACCCCTTGCTCATCAGCATCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR-3UTR TCA 90 bp TTGGTTGATGGGTGGGGCATGGTACTAGAAACCTATGGCTGCTTGGCAGGGGCGGTGGAGGCTCATGATTaGTGGGTGGAACATCAGTAC +
Preference number: 2 (lower is better)
Translates to: LVDGWGMVLETYGCLAGAVEAHD*WVEHQY
Trigger: GTACTGATGTTCCACCCATCAATCATGAGCCTCCAC...CGCCCCTGCCAAGCAGCCATAGGTTTCTAGTACCATGCCCCACCCATCAACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
3UTR-3UTR CCA 90 bp TTGGTTGATGGGTGGGGCATGGTACTAGAAACCTATGGCTGCTTGGCAGGGGCGCAACAGGCAGAGATGTaGCAGCATTTGCTGGCTTGT +
Preference number: 2 (lower is better)
Translates to: LVDGWGMVLETYGCLAGAQQAEM*QHLLAC
Trigger: ACAAGCCAGCAAATGCTGCCACATCTCTGCCTGTTG...CGCCCCTGCCAAGCAGCCATAGGTTTCTAGTACCATGCCCCACCCATCAACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
3UTR-3UTR TCA 90 bp GAAAATGCAGGTGGCCTACCAACAGATGTATGGCCTGCAAAGTTAAAAATGCCCAGCTGGTTCTCAGGCTaGGTGAGTCCTGCTGCCCTC +
Preference number: 2 (lower is better)
Translates to: ENAGGLPTDVWPAKLKMPSWFSG*VSPAAL
Trigger: GAGGGCAGCAGGACTCACTCAGCCTGAGAACCAGCT...GGGCATTTTTAACTTTGCAGGCCATACATCTGTTGGTAGGCCACCTGCATTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR-3UTR GCA 90 bp AGTGGGTTCAAGATGTGCCTCCTCTGGCTAAGCCTGGGGGACAGATACTCCAAAATAAATCAGGGAAGGTaGGTGCCTTTCTCCCTGCTC +
Preference number: 2 (lower is better)
Translates to: SGFKMCLLWLSLGDRYSKINQGR*VPFSLL
Trigger: GAGCAGGGAGAAAGGCACGCACCTTCCCTGATTTAT...TTTGGAGTATCTGTCCCCCAGGCTTAGCCAGAGGAGGCACATCTTGAACCCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR-3UTR GCA 90 bp TGGTACCAGAAGCCTATGGCTTTTAGTTATGGTTGTGGCTGGTGGAGGCTCTGGCTGAGTGAGTCCTGCTaGCCTCTCAGAAGGGAAAGT +
Preference number: 2 (lower is better)
Translates to: WYQKPMAFSYGCGWWRLWLSESC*PLRRES
Trigger: ACTTTCCCTTCTGAGAGGGCAGCAGGACTCACTCAG...CCAGAGCCTCCACCAGCCACAACCATAACTAAAAGCCATAGGCTTCTGGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
3UTR-3UTR CCA 90 bp TCATCAACCTCAGCTCCCTCTGGCTCAGGCAAATTAGAGTCCTTCTCTTTTGCAAGGGAGGGCAAAGGATaGGATTCCAGGGGGAAAGGG +
Preference number: 2 (lower is better)
Translates to: SSTSAPSGSGKLESFSFAREGKG*DSRGKG
Trigger: CCCTTTCCCCCTGGAATCCCATCCTTTGCCCTCCCT...TGCAAAAGAGAAGGACTCTAATTTGCCTGAGCCAGAGGGAGCTGAGGTTGATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
3UTR-3UTR CCA 90 bp AGAATACTGTCAGGGGAGGTCAGGTGGGCTCCCTTTGAGTCTCAGTCTCATCCATTACCTCACAAAGGATaGGCTGAAGGGGATGCAGCT +
Preference number: 2 (lower is better)
Translates to: RILSGEVRWAPFESQSHPLPHKG*AEGDAA
Trigger: AGCTGCATCCCCTTCAGCCCATCCTTTGTGAGGTAA...TGGATGAGACTGAGACTCAAAGGGAGCCCACCTGACCTCCCCTGACAGTATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR-3UTR CCA 90 bp AGTGATGCTGATGAGCAAGGGGTGAGAAGGGCCGTGGGTAATGGGTCTGATGCAGTAAGAAAATGCAGGTaGCCTACCAACAGATGTATG +
Preference number: 2 (lower is better)
Translates to: SDADEQGVRRAVGNGSDAVRKCR*PTNRCM
Trigger: CATACATCTGTTGGTAGGCCACCTGCATTTTCTTAC...TGCATCAGACCCATTACCCACGGCCCTTCTCACCCCTTGCTCATCAGCATCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR-3UTR TCA 90 bp TGGTACCAGAAGCCTATGGCTTTTAGTTATGGTTGTGGCTGGTGGAGGCTCTGGCAGATTGGCTGGCACTaGGAGCAAAATAAACCTTCT +
Preference number: 2 (lower is better)
Translates to: WYQKPMAFSYGCGWWRLWQIGWH*EQNKPS
Trigger: AGAAGGTTTATTTTGCTCTCAGTGCCAGCCAATCTG...CCAGAGCCTCCACCAGCCACAACCATAACTAAAAGCCATAGGCTTCTGGTACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
3UTR-3UTR GCA 90 bp GAAAATGCAGGTGGCCTACCAACAGATGTATGGCCTGCAAAGTTAAAAATGCCCCAGAATCAGGCTCGGTaGCCAGAAAGACCGAGAAGT +
Preference number: 2 (lower is better)
Translates to: ENAGGLPTDVWPAKLKMPQNQAR*PERPRS
Trigger: ACTTCTCGGTCTTTCTGGGCACCGAGCCTGATTCTG...GGGCATTTTTAACTTTGCAGGCCATACATCTGTTGGTAGGCCACCTGCATTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR-3UTR TCA 90 bp GAAAATGCAGGTGGCCTACCAACAGATGTATGGCCTGCAAAGTTAAAAATGCCCCCATCTCCAAGCCTCTaGGTGGATAAATCAGGGAAG +
Preference number: 2 (lower is better)
Translates to: ENAGGLPTDVWPAKLKMPPSPSL*VDKSGK
Trigger: CTTCCCTGATTTATCCACTCAGAGGCTTGGAGATGG...GGGCATTTTTAACTTTGCAGGCCATACATCTGTTGGTAGGCCACCTGCATTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR-3UTR CCA 90 bp GAAAATGCAGGTGGCCTACCAACAGATGTATGGCCTGCAAAGTTAAAAATGCCCTGTGGCAGCATTTGCTaGCTTGTAGCATTGGTCCTC +
Preference number: 2 (lower is better)
Translates to: ENAGGLPTDVWPAKLKMPCGSIC*LVALVL
Trigger: GAGGACCAATGCTACAAGCCAGCAAATGCTGCCACA...GGGCATTTTTAACTTTGCAGGCCATACATCTGTTGGTAGGCCACCTGCATTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR GCA 72 bp AGTCTGGGTAGAGAGACTGGTGGGTCCAAGAGCAAATaGCACCAAGTCCCCACCCTCAGGGCGGTGGCTAGG +
Preference number: 3 (lower is better)
Translates to: SLGRETGGSKSK*HQVPTLRAVAR
Trigger: CCTAGCCACCGCCCTGAGGGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTACCCAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR CCA 72 bp TCCCTGAGGGTTGGGGTGGTTAAGGGCAGAGATGGATaGCGTCCTGGGATGGCACAGCCTCCCTCTGAGGTA +
Preference number: 3 (lower is better)
Translates to: SLRVGVVKGRDG*RPGMAQPPSEV
Trigger: TACCTCAGAGGGAGGCTGTGCCATCCCAGGACGCCATCCATCTCTGCCCTTAACCACCCCAACCCTCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR CCA 72 bp ATGAAGAGGAACCATTTGTGGCTGGTGAGTGGGGTGTaGCCAGCAGAAGCTCAGGACTGTGAGGGGCGTGGC +
Preference number: 3 (lower is better)
Translates to: MKRNHLWLVSGV*PAEAQDCEGRG
Trigger: GCCACGCCCCTCACAGTCCTGAGCTTCTGCTGGCCACACCCCACTCACCAGCCACAAATGGTTCCTCTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
3UTR-3UTR CAA 90 bp GGAAAGCAGAAGGCTGTGAGGGTGGCAGGGTCACCTAAGGTCGCAAGGAGTGGGTCAGGTGGGCTCCCTTaGAGTCTCAGTCTCATCCAC +
Preference number: 3 (lower is better)
Translates to: GKQKAVRVAGSPKVARSGSGGLP*SLSLIH
Trigger: GTGGATGAGACTGAGACTCAAAGGGAGCCCACCTGA...CCCACTCCTTGCGACCTTAGGTGACCCTGCCACCCTCACAGCCTTCTGCTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR-3UTR CAA 90 bp CTGTCAGGGGAGGTCAGGTGGGCTCCCTTTGAGTCTCAGTCTCATCCACTAAGCGTGGAAGTTCGTGGCTaGAGGGAGGGACACGAGAAG +
Preference number: 3 (lower is better)
Translates to: LSGEVRWAPFESQSHPLSVEVRG*REGHEK
Trigger: CTTCTCGTGTCCCTCCCTCAAGCCACGAACTTCCAC...GCTTAGTGGATGAGACTGAGACTCAAAGGGAGCCCACCTGACCTCCCCTGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR-3UTR CAA 90 bp TTGGTTGATGGGTGGGGCATGGTACTAGAAACCTATGGCTGCTTGGCAGGGGCGAGGGTCCTGCCCAGATaGGCTGGCACTGAGAGCAAA +
Preference number: 3 (lower is better)
Translates to: LVDGWGMVLETYGCLAGARVLPR*AGTESK
Trigger: TTTGCTCTCAGTGCCAGCCAATCTGGGCAGGACCCT...CGCCCCTGCCAAGCAGCCATAGGTTTCTAGTACCATGCCCCACCCATCAACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
3UTR-3UTR CAA 90 bp AGTGATGCTGATGAGCAAGGGGTGAGAAGGGCCGTGGGTAATGGGTCTGATGCATGCTGGCTTGTAGCATaGGTCCTCTGGGACCCTCGG +
Preference number: 3 (lower is better)
Translates to: SDADEQGVRRAVGNGSDACWLVA*VLWDPR
Trigger: CCGAGGGTCCCAGAGGACCAATGCTACAAGCCAGCA...TGCATCAGACCCATTACCCACGGCCCTTCTCACCCCTTGCTCATCAGCATCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR GCA 72 bp CATCTCCAAGCCTCTGAGTGGATAAATCAGGGAAGGTaGGTGCCTTTCTCCCTGCTCCCCGCACAAACCCCT +
Preference number: 3 (lower is better)
Translates to: HLQASEWINQGR*VPFSLLPAQTP
Trigger: AGGGGTTTGTGCGGGGAGCAGGGAGAAAGGCACGCACCTTCCCTGATTTATCCACTCAGAGGCTTGGAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR GCA 72 bp GTTGATGGGTGGGGCATGGTACTAGAAACCTATGGCTaGTTGGCAGGGGCGTGGCTAGTGGAGGCTCATGAT +
Preference number: 3 (lower is better)
Translates to: VDGWGMVLETYG*LAGAWLVEAHD
Trigger: ATCATGAGCCTCCACTAGCCACGCCCCTGCCAAGCAGCCATAGGTTTCTAGTACCATGCCCCACCCATCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
3UTR CCA 72 bp GGCGTGGCAACCAGGGCTAGGTTCTTGGTTGATGGGTaGGGCATGGTACTAGAAACCTATGGCTGCTTGGCA +
Preference number: 3 (lower is better)
Translates to: GVATRARFLVDG*GMVLETYGCLA
Trigger: TGCCAAGCAGCCATAGGTTTCTAGTACCATGCCCCACCCATCAACCAAGAACCTAGCCCTGGTTGCCACGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
3UTR GCA 72 bp TCCACTAAGCTGGTTCTCAGGCTGAGTGAGTCCTGCTaGCCTCTCAGAAGGGAAAGTCTGTCAACGCCCCTT +
Preference number: 3 (lower is better)
Translates to: STKLVLRLSESC*PLRRESLSTPL
Trigger: AAGGGGCGTTGACAGACTTTCCCTTCTGAGAGGGCAGCAGGACTCACTCAGCCTGAGAACCAGCTTAGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR CCA 72 bp CTCCAAACGTCCCTCCTCCATCTCCAAGCCTCTGAGTaGATAAATCAGGGAAGGTGCGTGCCTTTCTCCCTG +
Preference number: 3 (lower is better)
Translates to: LQTSLLHLQASE*INQGRCVPFSL
Trigger: CAGGGAGAAAGGCACGCACCTTCCCTGATTTATCCACTCAGAGGCTTGGAGATGGAGGAGGGACGTTTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR TCA 72 bp GAGAAGGGACATCAAGTGATGCTGATGAGCAAGGGGTaGGAAGGGCCGTGGGTAATGGGTCTGATGCACAAA +
Preference number: 3 (lower is better)
Translates to: EKGHQVMLMSKG*EGPWVMGLMHK
Trigger: TTTGTGCATCAGACCCATTACCCACGGCCCTTCTCACCCCTTGCTCATCAGCATCACTTGATGTCCCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR TCA 72 bp TGGCTGCTTGGCAGGGGCGTGGCTAGTGGAGGCTCATaGTTGATGGGTGGAACATCAGTACTAGAAACCAAT +
Preference number: 3 (lower is better)
Translates to: WLLGRGVASGGS*LMGGTSVLETN
Trigger: ATTGGTTTCTAGTACTGATGTTCCACCCATCAATCATGAGCCTCCACTAGCCACGCCCCTGCCAAGCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
3UTR CCA 72 bp AATGTCAGAAGTAGTGGGTTCAAGATGTGCCTCCTCTaGCTAAGCCTGGGGGACAGATACTCCAAACGTCCC +
Preference number: 3 (lower is better)
Translates to: NVRSSGFKMCLL*LSLGDRYSKRP
Trigger: GGGACGTTTGGAGTATCTGTCCCCCAGGCTTAGCCAGAGGAGGCACATCTTGAACCCACTACTTCTGACATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR CCA 72 bp GCAATCCCACAATATCCTATGAAGAGGAACCATTTGTaGCTGGTGAGTGGGGTGTGGCCAGCAGAAGCTCAG +
Preference number: 3 (lower is better)
Translates to: AIPQYPMKRNHL*LVSGVWPAEAQ
Trigger: CTGAGCTTCTGCTGGCCACACCCCACTCACCAGCCACAAATGGTTCCTCTTCATAGGATATTGTGGGATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
3UTR-3UTR CAA 90 bp AGTGATGCTGATGAGCAAGGGGTGAGAAGGGCCGTGGGTAATGGGTCTGATGCACCAAGGATGTCTTTTTaGGGGCAGGAGACATCAACA +
Preference number: 3 (lower is better)
Translates to: SDADEQGVRRAVGNGSDAPRMSF*GQETST
Trigger: TGTTGATGTCTCCTGCCCCAAAAAAGACATCCTTGG...TGCATCAGACCCATTACCCACGGCCCTTCTCACCCCTTGCTCATCAGCATCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR-3UTR CAA 90 bp GAAAATGCAGGTGGCCTACCAACAGATGTATGGCCTGCAAAGTTAAAAATGCCCAGGGTCCTGCCCAGATaGGCTGGCACTGAGAGCAAA +
Preference number: 3 (lower is better)
Translates to: ENAGGLPTDVWPAKLKMPRVLPR*AGTESK
Trigger: TTTGCTCTCAGTGCCAGCCAATCTGGGCAGGACCCT...GGGCATTTTTAACTTTGCAGGCCATACATCTGTTGGTAGGCCACCTGCATTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR CCA 72 bp GTTAACCCTTCTAGAATACTGTCAGGGGAGGTCAGGTaGGCTCCCTTTGAGTCTCAGTCTCATCCACTAAGC +
Preference number: 3 (lower is better)
Translates to: VNPSRILSGEVR*APFESQSHPLS
Trigger: GCTTAGTGGATGAGACTGAGACTCAAAGGGAGCCCACCTGACCTCCCCTGACAGTATTCTAGAAGGGTTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
3UTR CCA 72 bp TTGAATGTGGTTAGCGTATGCTGGTGTCCTGCTGTCTaGCCAACTCTAATGCAAAGGCTGCCGGGTCTGTTT +
Preference number: 3 (lower is better)
Translates to: LNVVSVCWCPAV*PTLMQRLPGLF
Trigger: AAACAGACCCGGCAGCCTTTGCATTAGAGTTGGCCAGACAGCAGGACACCAGCATACGCTAACCACATTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
3UTR CCA 72 bp ATGATTGATGGGTGGAACATCAGTACTAGAAACCAATaGCTAATGGGCAGGGGTGAAACTAGTAGATGCTCT +
Preference number: 3 (lower is better)
Translates to: MIDGWNISTRNQ*LMGRGETSRCS
Trigger: AGAGCATCTACTAGTTTCACCCCTGCCCATTAGCCATTGGTTTCTAGTACTGATGTTCCACCCATCAATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
3UTR GCA 72 bp TCCCTCTGGCTCAGGCAAATTAGAGTCCTTCTCTTTTaGAATCCCACAATATCCTATGAAGAGGAACCATTT +
Preference number: 3 (lower is better)
Translates to: SLWLRQIRVLLF*NPTISYEEEPF
Trigger: AAATGGTTCCTCTTCATAGGATATTGTGGGATTGCAAAAGAGAAGGACTCTAATTTGCCTGAGCCAGAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
3UTR CCA 72 bp TTTTATTTAGGAAACTTCATCAACCTCAGCTCCCTCTaGCTCAGGCAAATTAGAGTCCTTCTCTTTTGCAAT +
Preference number: 3 (lower is better)
Translates to: FYLGNFINLSSL*LRQIRVLLFCN
Trigger: ATTGCAAAAGAGAAGGACTCTAATTTGCCTGAGCCAGAGGGAGCTGAGGTTGATGAAGTTTCCTAAATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp AGGCTCGGTGCCCAGAAAGACCGAGAAGTAGTGTCTGGCCAGGGGACTCGGGTTCGGTGGCTCCCGGCCTaGGGGCAGCATCCGCAGCAT +
Preference number: 4 (lower is better)
Translates to: RLGAQKDREVVSGQGTRVRWLPA*GQHPQH
Trigger: ATGCTGCGGATGCTGCCCGCAGGCCGGGAGCCACCG...AACCCGAGTCCCCTGGCCAGACACTACTTCTCGGTCTTTCTGGGCACCGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp CACACAGGCTCCTCCCTCCAAGGCGTGGCTAGGCTCTCAGAGGTAGTGGAGGGTGAAGGCCAGCGTGCCTaGACGCACCTCGAAGGGGCG +
Preference number: 4 (lower is better)
Translates to: HTGSSLQGVARLSEVVEGEGQRA*THLEGA
Trigger: CGCCCCTTCGAGGTGCGTGCAGGCACGCTGGCCTTC...ACCCTCCACTACCTCTGAGAGCCTAGCCACGCCTTGGAGGGAGGAGCCTGTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR TCA 90 bp GTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCCTCAGGGGCGTCTCCCCGGGCTTaGACACCAGCGTGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: VERLVGPRANATKSPPSGASPRA*TPACPR
Trigger: GCGAGGGCACGCTGGTGTTCAAGCCCGGGGAGACGC...CCCTGAGGGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR TCA 90 bp GGCAGAGATGGATGGCGTCCTGGGATGGCACAGCCTCCCTCTGAGGTACCTAGGGGCTCGAACATGCCCTaGGCATCGCCCACACGCAGG +
Preference number: 4 (lower is better)
Translates to: GRDGWRPGMAQPPSEVPRGSNMP*ASPTRR
Trigger: CCTGCGTGTGGGCGATGCTCAGGGCATGTTCGAGCC...CCTAGGTACCTCAGAGGGAGGCTGTGCCATCCCAGGACGCCATCCATCTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp CACACAGGCTCCTCCCTCCAAGGCGTGGCTAGGCTCTCAGAGGTAGTGGAGGGTCCGTGCCGTCCACTGTaGGGTAGGGGAGGCGTACAG +
Preference number: 4 (lower is better)
Translates to: HTGSSLQGVARLSEVVEGPCRPL*GRGGVQ
Trigger: CTGTACGCCTCCCCTACCGCACAGTGGACGGCACGG...ACCCTCCACTACCTCTGAGAGCCTAGCCACGCCTTGGAGGGAGGAGCCTGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp CACACAGGCTCCTCCCTCCAAGGCGTGGCTAGGCTCTCAGAGGTAGTGGAGGGTGCAGCGCGGCCACCTTaGTGGCGAACGTGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: HTGSSLQGVARLSEVVEGAARPP*WRTCQG
Trigger: TCCCTGACACGTTCGCCAGCAAGGTGGCCGCGCTGC...ACCCTCCACTACCTCTGAGAGCCTAGCCACGCCTTGGAGGGAGGAGCCTGTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp GGCAGAGATGGATGGCGTCCTGGGATGGCACAGCCTCCCTCTGAGGTACCTAGGCGGCACTGCCCACGATaGTGCCTGGGCCTAGCTCAC +
Preference number: 4 (lower is better)
Translates to: GRDGWRPGMAQPPSEVPRRHCPR*CLGLAH
Trigger: GTGAGCTAGGCCCAGGCACCATCGTGGGCAGTGCCG...CCTAGGTACCTCAGAGGGAGGCTGTGCCATCCCAGGACGCCATCCATCTCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR TCA 90 bp GTCTGGGTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCCCGTCGTCCAGGATGGTaGCAGTGGCCAGCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: VWVERLVGPRANATKSPPRRPGW*QWPAAA
Trigger: CGCCGCTGCTGGCCACTGTCACCATCCTGGACGACG...GGGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTACCCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp GGAAAGCAGAAGGCTGTGAGGGTGGCAGGGTCACCTAAGGTCGCAAGGAGTGGGCACTGCCCACGATGGTaGCTGGGCCTAGCTCACCGG +
Preference number: 4 (lower is better)
Translates to: GKQKAVRVAGSPKVARSGHCPRW*LGLAHR
Trigger: CCGGTGAGCTAGGCCCAGGCACCATCGTGGGCAGTG...CCCACTCCTTGCGACCTTAGGTGACCCTGCCACCCTCACAGCCTTCTGCTTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp GTCTGGGTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCCGCCGCGTGGCCTGGATaGGGTAGAAGGCGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: VWVERLVGPRANATKSPPAAWPG*GRRRGS
Trigger: AGAGCCGCGCCTTCTACCGCATCCAGGCCACGCGGC...GGGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTACCCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp CACACAGGCTCCTCCCTCCAAGGCGTGGCTAGGCTCTCAGAGGTAGTGGAGGGTCGTCGGGCTCGAACATaGCCTGAGCATCGCCCACAC +
Preference number: 4 (lower is better)
Translates to: HTGSSLQGVARLSEVVEGRRART*PEHRPH
Trigger: GTGTGGGCGATGCTCAGGGCATGTTCGAGCCCGACG...ACCCTCCACTACCTCTGAGAGCCTAGCCACGCCTTGGAGGGAGGAGCCTGTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp AGGCTCGGTGCCCAGAAAGACCGAGAAGTAGTGTCTGGCCAGGGGACTCGGGTTCCGAGAAGGCCAGCGTaGCTGCACGCACCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: RLGAQKDREVVSGQGTRVPRRPA*LHAPRR
Trigger: CCTTCGAGGTGCGTGCAGGCACGCTGGCCTTCTCGG...AACCCGAGTCCCCTGGCCAGACACTACTTCTCGGTCTTTCTGGGCACCGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp GTCTGGGTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCCAGCTCGCCGCCAATCTaGGGCCGGCGCCGGTACAAC +
Preference number: 4 (lower is better)
Translates to: VWVERLVGPRANATKSPPSSPPI*GRRRYN
Trigger: GTTGTACCGGCGCCGGCCGCAGATTGGCGGCGAGCT...GGGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTACCCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp GGCAGAGATGGATGGCGTCCTGGGATGGCACAGCCTCCCTCTGAGGTACCTAGGCCAGCTCGATGCTCTTaGGTGGGTCTCCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: GRDGWRPGMAQPPSEVPRPARCS*VGLPLP
Trigger: GGGCAGAGGGAGACCCACCCAAGAGCATCGAGCTGG...CCTAGGTACCTCAGAGGGAGGCTGTGCCATCCCAGGACGCCATCCATCTCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp GGAAAGCAGAAGGCTGTGAGGGTGGCAGGGTCACCTAAGGTCGCAAGGAGTGGGGCGCGGCCACCTTGCTaGCGAACGTGTCAGGGATGG +
Preference number: 4 (lower is better)
Translates to: GKQKAVRVAGSPKVARSGARPPC*RTCQGW
Trigger: CCATCCCTGACACGTTCGCCAGCAAGGTGGCCGCGC...CCCACTCCTTGCGACCTTAGGTGACCCTGCCACCCTCACAGCCTTCTGCTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp AGTCTGGGTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCGACGCGTCGGCACACTaGTCCTGCAGCGCGGCCACC +
Preference number: 4 (lower is better)
Translates to: SLGRETGGSKSKCHQVPTDASAH*SCSAAT
Trigger: GGTGGCCGCGCTGCAGGACCAGTGTGCCGACGCGTC...GGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTACCCAGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR TCA 90 bp AGGCTCGGTGCCCAGAAAGACCGAGAAGTAGTGTCTGGCCAGGGGACTCGGGTTCAGAATCTCAGGCGCTaGGGAGCCCAGGGCCATGAG +
Preference number: 4 (lower is better)
Translates to: RLGAQKDREVVSGQGTRVQNLRR*GAQGHE
Trigger: CTCATGGCCCTGGGCTCCTCAGCGCCTGAGATTCTG...AACCCGAGTCCCCTGGCCAGACACTACTTCTCGGTCTTTCTGGGCACCGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp AGTCTGGGTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCCACGGGCGCCCGAGCTaGGAACCACGCGCACATCCA +
Preference number: 4 (lower is better)
Translates to: SLGRETGGSKSKCHQVPTHGRPS*EPRAHP
Trigger: TGGATGTGCGCGTGGTTCGCAGCTCGGGCGCCCGTG...GGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTACCCAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp GTCTGGGTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCCCGCCCAGTATACCGCTaGCACCGACCAGGCCACACC +
Preference number: 4 (lower is better)
Translates to: VWVERLVGPRANATKSPPRPVYR*HRPGHT
Trigger: GGTGTGGCCTGGTCGGTGGCAGCGGTATACTGGGCG...GGGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTACCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp CTGTCAGGGGAGGTCAGGTGGGCTCCCTTTGAGTCTCAGTCTCATCCACTAAGCGAAGGCCAGCGTGCCTaGACGCACCTCGAAGGGGCG +
Preference number: 4 (lower is better)
Translates to: LSGEVRWAPFESQSHPLSEGQRA*THLEGA
Trigger: CGCCCCTTCGAGGTGCGTGCAGGCACGCTGGCCTTC...GCTTAGTGGATGAGACTGAGACTCAAAGGGAGCCCACCTGACCTCCCCTGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp TTGGTTGATGGGTGGGGCATGGTACTAGAAACCTATGGCTGCTTGGCAGGGGCGAGCTCGCCGCCAATCTaGGGCCGGCGCCGGTACAAC +
Preference number: 4 (lower is better)
Translates to: LVDGWGMVLETYGCLAGASSPPI*GRRRYN
Trigger: GTTGTACCGGCGCCGGCCGCAGATTGGCGGCGAGCT...CGCCCCTGCCAAGCAGCCATAGGTTTCTAGTACCATGCCCCACCCATCAACCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp GGCAGAGATGGATGGCGTCCTGGGATGGCACAGCCTCCCTCTGAGGTACCTAGGGAGAAGATGCCCGCGTaGTCGTCGTCCAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: GRDGWRPGMAQPPSEVPREKMPA*SSSRMV
Trigger: CACCATCCTGGACGACGACCACGCGGGCATCTTCTC...CCTAGGTACCTCAGAGGGAGGCTGTGCCATCCCAGGACGCCATCCATCTCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp GGCAGAGATGGATGGCGTCCTGGGATGGCACAGCCTCCCTCTGAGGTACCTAGGCGGTCACGTTACCGATaGACGCGTCGGCACACTGGT +
Preference number: 4 (lower is better)
Translates to: GRDGWRPGMAQPPSEVPRRSRYR*TRRHTG
Trigger: ACCAGTGTGCCGACGCGTCCATCGGTAACGTGACCG...CCTAGGTACCTCAGAGGGAGGCTGTGCCATCCCAGGACGCCATCCATCTCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp ATGTGCCTCCTCTGGCTAAGCCTGGGGGACAGATACTCCAAACGTCCCTCCTCCCCAGGAAGAGAGCGGTaGTGGCCAGCTTGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: MCLLWLSLGDRYSKRPSSPGRER*WPAWVP
Trigger: GGGGACCCAAGCTGGCCACCACCGCTCTCTTCCTGG...GGAGGAGGGACGTTTGGAGTATCTGTCCCCCAGGCTTAGCCAGAGGAGGCACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR TCA 90 bp AGAATACTGTCAGGGGAGGTCAGGTGGGCTCCCTTTGAGTCTCAGTCTCATCCAGCGTCTCCCCGGGCTTaGACACCAGCGTGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: RILSGEVRWAPFESQSHPASPRA*TPACPR
Trigger: GCGAGGGCACGCTGGTGTTCAAGCCCGGGGAGACGC...TGGATGAGACTGAGACTCAAAGGGAGCCCACCTGACCTCCCCTGACAGTATTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp GTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCCTCAGGGTCCAGATGCGCACCGTaGCCACGCTGGTCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: VERLVGPRANATKSPPSGSRCAP*PRWSPH
Trigger: ATGGGGAGACCAGCGTGGGCACGGTGCGCATCTGGA...CCCTGAGGGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp AGTGATGCTGATGAGCAAGGGGTGAGAAGGGCCGTGGGTAATGGGTCTGATGCAGCCGCGTGGCCTGGATaGGGTAGAAGGCGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: SDADEQGVRRAVGNGSDAAAWPG*GRRRGS
Trigger: AGAGCCGCGCCTTCTACCGCATCCAGGCCACGCGGC...TGCATCAGACCCATTACCCACGGCCCTTCTCACCCCTTGCTCATCAGCATCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp GGAAAGCAGAAGGCTGTGAGGGTGGCAGGGTCACCTAAGGTCGCAAGGAGTGGGCCTGGAAGGAGAAGATaGCCGCGTGGTCGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: GKQKAVRVAGSPKVARSGPGRRR*PRGRRP
Trigger: TGGACGACGACCACGCGGGCATCTTCTCCTTCCAGG...CCCACTCCTTGCGACCTTAGGTGACCCTGCCACCCTCACAGCCTTCTGCTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp AGTGATGCTGATGAGCAAGGGGTGAGAAGGGCCGTGGGTAATGGGTCTGATGCACACGGGCGCCCGAGCTaGGAACCACGCGCACATCCA +
Preference number: 4 (lower is better)
Translates to: SDADEQGVRRAVGNGSDAHGRPS*EPRAHP
Trigger: TGGATGTGCGCGTGGTTCGCAGCTCGGGCGCCCGTG...TGCATCAGACCCATTACCCACGGCCCTTCTCACCCCTTGCTCATCAGCATCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp GCAAAGGCTGCCGGGTCTGTTTCCTGTGGTCTAGATGTCGGAGCTGCTACCATCCCGTGCCGTCCACTGTaGGGTAGGGGAGGCGTACAG +
Preference number: 4 (lower is better)
Translates to: AKAAGSVSCGLDVGAATIPCRPL*GRGGVQ
Trigger: CTGTACGCCTCCCCTACCGCACAGTGGACGGCACGG...GATGGTAGCAGCTCCGACATCTAGACCACAGGAAACAGACCCGGCAGCCTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp GGCAGAGATGGATGGCGTCCTGGGATGGCACAGCCTCCCTCTGAGGTACCTAGGTGGCTTGCCCATCTCTaGTATCCTCTGGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GRDGWRPGMAQPPSEVPRWLAHL*YPLGLL
Trigger: GAGGAGGCCCAGAGGATAGCAGAGATGGGCAAGCCA...CCTAGGTACCTCAGAGGGAGGCTGTGCCATCCCAGGACGCCATCCATCTCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp ATGTGCCTCCTCTGGCTAAGCCTGGGGGACAGATACTCCAAACGTCCCTCCTCCTCGAAGGGGCGACCCTaGACCGCCCAGTATACCGCT +
Preference number: 4 (lower is better)
Translates to: MCLLWLSLGDRYSKRPSSSKGRP*TAQYTA
Trigger: AGCGGTATACTGGGCGGTGCAGGGTCGCCCCTTCGA...GGAGGAGGGACGTTTGGAGTATCTGTCCCCCAGGCTTAGCCAGAGGAGGCACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp GTCTGGGTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCCGCACCGTGCCCACGCTaGTCTCCCCATTTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: VWVERLVGPRANATKSPPAPCPR*SPHLPW
Trigger: CCAAGGCAAATGGGGAGACCAGCGTGGGCACGGTGC...GGGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTACCCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp GGCAGAGATGGATGGCGTCCTGGGATGGCACAGCCTCCCTCTGAGGTACCTAGGCCGGCCTGGAAGTTGTaGCCACAGACCTCGATGACA +
Preference number: 4 (lower is better)
Translates to: GRDGWRPGMAQPPSEVPRPAWKL*PQTSMT
Trigger: TGTCATCGAGGTCTGTGGCCACAACTTCCAGGCCGG...CCTAGGTACCTCAGAGGGAGGCTGTGCCATCCCAGGACGCCATCCATCTCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp GTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCCTCAGGGCCAGCTCGATGCTCTTaGGTGGGTCTCCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: VERLVGPRANATKSPPSGPARCS*VGLPLP
Trigger: GGGCAGAGGGAGACCCACCCAAGAGCATCGAGCTGG...CCCTGAGGGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp GGAAAGCAGAAGGCTGTGAGGGTGGCAGGGTCACCTAAGGTCGCAAGGAGTGGGGAGAAGATGCCCGCGTaGTCGTCGTCCAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: GKQKAVRVAGSPKVARSGEKMPA*SSSRMV
Trigger: CACCATCCTGGACGACGACCACGCGGGCATCTTCTC...CCCACTCCTTGCGACCTTAGGTGACCCTGCCACCCTCACAGCCTTCTGCTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp GTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCCTCAGGGTGCAGCAGGCGGTCCTaGAAGGAGAAGATGCCCGCG +
Preference number: 4 (lower is better)
Translates to: VERLVGPRANATKSPPSGCSRRS*KEKMPA
Trigger: CGCGGGCATCTTCTCCTTCCAGGACCGCCTGCTGCA...CCCTGAGGGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp AGAATACTGTCAGGGGAGGTCAGGTGGGCTCCCTTTGAGTCTCAGTCTCATCCAGACGCGTCGGCACACTaGTCCTGCAGCGCGGCCACC +
Preference number: 4 (lower is better)
Translates to: RILSGEVRWAPFESQSHPDASAH*SCSAAT
Trigger: GGTGGCCGCGCTGCAGGACCAGTGTGCCGACGCGTC...TGGATGAGACTGAGACTCAAAGGGAGCCCACCTGACCTCCCCTGACAGTATTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp AGTGATGCTGATGAGCAAGGGGTGAGAAGGGCCGTGGGTAATGGGTCTGATGCAGGAAGAGAGCGGTGGTaGCCAGCTTGGGTCCCCGCG +
Preference number: 4 (lower is better)
Translates to: SDADEQGVRRAVGNGSDAGRERW*PAWVPA
Trigger: CGCGGGGACCCAAGCTGGCCACCACCGCTCTCTTCC...TGCATCAGACCCATTACCCACGGCCCTTCTCACCCCTTGCTCATCAGCATCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp AGTCTGGGTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCCCAGGAAGAGAGCGGTaGTGGCCAGCTTGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: SLGRETGGSKSKCHQVPTPGRER*WPAWVP
Trigger: GGGGACCCAAGCTGGCCACCACCGCTCTCTTCCTGG...GGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTACCCAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR TCA 90 bp AGGCTCGGTGCCCAGAAAGACCGAGAAGTAGTGTCTGGCCAGGGGACTCGGGTTAGATGTCGTCGTCGATaGTCCCGATGCGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: RLGAQKDREVVSGQGTRVRCRRR*SRCAGP
Trigger: AGGACCTGCGCATCGGGATCATCGACGACGACATCT...AACCCGAGTCCCCTGGCCAGACACTACTTCTCGGTCTTTCTGGGCACCGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR TCA 90 bp GTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCCTCAGGGGGTGCACCCAAAGTGTaGGGCCAGGTCTCCGATGAG +
Preference number: 4 (lower is better)
Translates to: VERLVGPRANATKSPPSGGAPKV*GQVSDE
Trigger: CTCATCGGAGACCTGGCCTCACACTTTGGGTGCACC...CCCTGAGGGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp GTCTGGGTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCCCACTGCGAGGGTCGGTaGGGTAGCGCTTGTACACGT +
Preference number: 4 (lower is better)
Translates to: VWVERLVGPRANATKSPPHCEGR*GSACTR
Trigger: ACGTGTACAAGCGCTACCGCACCGACCCTCGCAGTG...GGGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTACCCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp GGAAAGCAGAAGGCTGTGAGGGTGGCAGGGTCACCTAAGGTCGCAAGGAGTGGGCAGTGCCCACGAATGTaGCGTCCAGCTCGATGCTCT +
Preference number: 4 (lower is better)
Translates to: GKQKAVRVAGSPKVARSGQCPRM*RPARCS
Trigger: AGAGCATCGAGCTGGACGGCACATTCGTGGGCACTG...CCCACTCCTTGCGACCTTAGGTGACCCTGCCACCCTCACAGCCTTCTGCTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp GTCTGGGTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCCCATCCGCAGCATGTCTaGGCAGCACATTGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: VWVERLVGPRANATKSPPHPQHV*AAHCPH
Trigger: GTGCGGGCAATGTGCTGCGCAGACATGCTGCGGATG...GGGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTACCCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp TGGTACCAGAAGCCTATGGCTTTTAGTTATGGTTGTGGCTGGTGGAGGCTCTGGCGGTGGCTCCCGGCCTaGGGGCAGCATCCGCAGCAT +
Preference number: 4 (lower is better)
Translates to: WYQKPMAFSYGCGWWRLWRWLPA*GQHPQH
Trigger: ATGCTGCGGATGCTGCCCGCAGGCCGGGAGCCACCG...CCAGAGCCTCCACCAGCCACAACCATAACTAAAAGCCATAGGCTTCTGGTACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp GTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCCTCAGGGCCTGGAAGGAGAAGATaGCCGCGTGGTCGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: VERLVGPRANATKSPPSGPGRRR*PRGRRP
Trigger: TGGACGACGACCACGCGGGCATCTTCTCCTTCCAGG...CCCTGAGGGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp AGTCTGGGTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCTCGAAGGGGCGACCCTaGACCGCCCAGTATACCGCT +
Preference number: 4 (lower is better)
Translates to: SLGRETGGSKSKCHQVPTSKGRP*TAQYTA
Trigger: AGCGGTATACTGGGCGGTGCAGGGTCGCCCCTTCGA...GGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTACCCAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp CACACAGGCTCCTCCCTCCAAGGCGTGGCTAGGCTCTCAGAGGTAGTGGAGGGTACAACAGCACTGCGATaGACACGAAGGCGAAGACGG +
Preference number: 4 (lower is better)
Translates to: HTGSSLQGVARLSEVVEGTTALR*TRRRRR
Trigger: CCGTCTTCGCCTTCGTGTGCATCGCAGTGCTGTTGT...ACCCTCCACTACCTCTGAGAGCCTAGCCACGCCTTGGAGGGAGGAGCCTGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp ATGTGCCTCCTCTGGCTAAGCCTGGGGGACAGATACTCCAAACGTCCCTCCTCCAGGCAGCAGCACACCTaGTTGGCAGCGGTAGGAACC +
Preference number: 4 (lower is better)
Translates to: MCLLWLSLGDRYSKRPSSRQQHT*LAAVGT
Trigger: GGTTCCTACCGCTGCCAACCAGGTGTGCTGCTGCCT...GGAGGAGGGACGTTTGGAGTATCTGTCCCCCAGGCTTAGCCAGAGGAGGCACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp GGCAGAGATGGATGGCGTCCTGGGATGGCACAGCCTCCCTCTGAGGTACCTAGGAGTGCCTCCCACACCTaGACTACACCTGGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: GRDGWRPGMAQPPSEVPRSASHT*TTPGEK
Trigger: TTTCTCCCCAGGTGTAGTCCAGGTGTGGGAGGCACT...CCTAGGTACCTCAGAGGGAGGCTGTGCCATCCCAGGACGCCATCCATCTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp GTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCCTCAGGGCTCGATGCTCTTGGGTaGGTCTCCCTCTGCCCCGAT +
Preference number: 4 (lower is better)
Translates to: VERLVGPRANATKSPPSGLDALG*VSLCPD
Trigger: ATCGGGGCAGAGGGAGACCCACCCAAGAGCATCGAG...CCCTGAGGGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp GTCTGGGTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCCCTGTCATCAGCCGCGTaGCCTGGATGCGGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: VWVERLVGPRANATKSPPLSSAA*PGCGRR
Trigger: CCTTCTACCGCATCCAGGCCACGCGGCTGATGACAG...GGGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTACCCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp AGTGATGCTGATGAGCAAGGGGTGAGAAGGGCCGTGGGTAATGGGTCTGATGCAGCGCGGCCACCTTGCTaGCGAACGTGTCAGGGATGG +
Preference number: 4 (lower is better)
Translates to: SDADEQGVRRAVGNGSDAARPPC*RTCQGW
Trigger: CCATCCCTGACACGTTCGCCAGCAAGGTGGCCGCGC...TGCATCAGACCCATTACCCACGGCCCTTCTCACCCCTTGCTCATCAGCATCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR TCA 90 bp CTGTCAGGGGAGGTCAGGTGGGCTCCCTTTGAGTCTCAGTCTCATCCACTAAGCCACGGACAGCAGCACTaGCCCGCAGTTTTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LSGEVRWAPFESQSHPLSHGQQH*PAVFQA
Trigger: TGCCTGGAAAACTGCGGGTCAGTGCTGCTGTCCGTG...GCTTAGTGGATGAGACTGAGACTCAAAGGGAGCCCACCTGACCTCCCCTGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR TCA 90 bp AGTCTGGGTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCGGTGCACCCAAAGTGTaGGGCCAGGTCTCCGATGAG +
Preference number: 4 (lower is better)
Translates to: SLGRETGGSKSKCHQVPTGAPKV*GQVSDE
Trigger: CTCATCGGAGACCTGGCCTCACACTTTGGGTGCACC...GGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTACCCAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR TCA 90 bp CACACAGGCTCCTCCCTCCAAGGCGTGGCTAGGCTCTCAGAGGTAGTGGAGGGTCTCCATTCCCTTGGTTaGGTAGCAGAGCTGAGATGC +
Preference number: 4 (lower is better)
Translates to: HTGSSLQGVARLSEVVEGLHSLG*VAELRC
Trigger: GCATCTCAGCTCTGCTACTCAACCAAGGGAATGGAG...ACCCTCCACTACCTCTGAGAGCCTAGCCACGCCTTGGAGGGAGGAGCCTGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp AGAATACTGTCAGGGGAGGTCAGGTGGGCTCCCTTTGAGTCTCAGTCTCATCCACCGTCTCGTTCCAGATaGGCACCGTGCCCACGCTGG +
Preference number: 4 (lower is better)
Translates to: RILSGEVRWAPFESQSHPPSRSR*APCPRW
Trigger: CCAGCGTGGGCACGGTGCGCATCTGGAACGAGACGG...TGGATGAGACTGAGACTCAAAGGGAGCCCACCTGACCTCCCCTGACAGTATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp GGCAGAGATGGATGGCGTCCTGGGATGGCACAGCCTCCCTCTGAGGTACCTAGGCATAGTACTTGGCGATaGCCATCAGCTGCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GRDGWRPGMAQPPSEVPRHSTWR*PSAAPG
Trigger: ACCTGGAGCAGCTGATGGGCATCGCCAAGTACTATG...CCTAGGTACCTCAGAGGGAGGCTGTGCCATCCCAGGACGCCATCCATCTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp AGGCTCGGTGCCCAGAAAGACCGAGAAGTAGTGTCTGGCCAGGGGACTCGGGTTCTGCTGGTGCAGCAGTaGATAGTACTTGGCGATGCC +
Preference number: 4 (lower is better)
Translates to: RLGAQKDREVVSGQGTRVLLVQQ*IVLGDA
Trigger: GGCATCGCCAAGTACTATGCACTGCTGCACCAGCAG...AACCCGAGTCCCCTGGCCAGACACTACTTCTCGGTCTTTCTGGGCACCGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp AGTCTGGGTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCGTCTGCGCAGCACATTaGCCGCACCTGTCATCAGCC +
Preference number: 4 (lower is better)
Translates to: SLGRETGGSKSKCHQVPTVCAAH*PHLSSA
Trigger: GGCTGATGACAGGTGCGGGCAATGTGCTGCGCAGAC...GGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTACCCAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp AGTCTGGGTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCCGTAGAAGGTGCTGTTaGCCTCACCGCCCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: SLGRETGGSKSKCHQVPTRRRCC*PHRPGK
Trigger: CTTGCCAGGGCGGTGAGGGCAACAGCACCTTCTACG...GGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTACCCAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp AGAATACTGTCAGGGGAGGTCAGGTGGGCTCCCTTTGAGTCTCAGTCTCATCCATCGGCACACTGGTCCTaGAGCGCGGCCACCTTGCTG +
Preference number: 4 (lower is better)
Translates to: RILSGEVRWAPFESQSHPSAHWS*SAATLL
Trigger: CAGCAAGGTGGCCGCGCTGCAGGACCAGTGTGCCGA...TGGATGAGACTGAGACTCAAAGGGAGCCCACCTGACCTCCCCTGACAGTATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp AGAATACTGTCAGGGGAGGTCAGGTGGGCTCCCTTTGAGTCTCAGTCTCATCCACCGAGAAGGCCAGCGTaGCTGCACGCACCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: RILSGEVRWAPFESQSHPPRRPA*LHAPRR
Trigger: CCTTCGAGGTGCGTGCAGGCACGCTGGCCTTCTCGG...TGGATGAGACTGAGACTCAAAGGGAGCCCACCTGACCTCCCCTGACAGTATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp AGTGGGTTCAAGATGTGCCTCCTCTGGCTAAGCCTGGGGGACAGATACTCCAAACGGCACTGCCCACGATaGTGCCTGGGCCTAGCTCAC +
Preference number: 4 (lower is better)
Translates to: SGFKMCLLWLSLGDRYSKRHCPR*CLGLAH
Trigger: GTGAGCTAGGCCCAGGCACCATCGTGGGCAGTGCCG...TTTGGAGTATCTGTCCCCCAGGCTTAGCCAGAGGAGGCACATCTTGAACCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp CACACAGGCTCCTCCCTCCAAGGCGTGGCTAGGCTCTCAGAGGTAGTGGAGGGTTTAAGCCACTGGGGCTaGCCCAGCTCAATGAAGAAG +
Preference number: 4 (lower is better)
Translates to: HTGSSLQGVARLSEVVEGLSHWG*PSSMKK
Trigger: CTTCTTCATTGAGCTGGGCCAGCCCCAGTGGCTTAA...ACCCTCCACTACCTCTGAGAGCCTAGCCACGCCTTGGAGGGAGGAGCCTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp GCAAAGGCTGCCGGGTCTGTTTCCTGTGGTCTAGATGTCGGAGCTGCTACCATCCCTCGCTTAAGCCACTaGGGCTGGCCCAGCTCAATG +
Preference number: 4 (lower is better)
Translates to: AKAAGSVSCGLDVGAATIPRLSH*GWPSSM
Trigger: CATTGAGCTGGGCCAGCCCCAGTGGCTTAAGCGAGG...GATGGTAGCAGCTCCGACATCTAGACCACAGGAAACAGACCCGGCAGCCTTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp CTGTCAGGGGAGGTCAGGTGGGCTCCCTTTGAGTCTCAGTCTCATCCACTAAGCCGGTCACGTTACCGATaGACGCGTCGGCACACTGGT +
Preference number: 4 (lower is better)
Translates to: LSGEVRWAPFESQSHPLSRSRYR*TRRHTG
Trigger: ACCAGTGTGCCGACGCGTCCATCGGTAACGTGACCG...GCTTAGTGGATGAGACTGAGACTCAAAGGGAGCCCACCTGACCTCCCCTGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR TCA 90 bp GTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCCTCAGGGTGCTCCAGGAGGCTGTaGCAAAGAAGACCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: VERLVGPRANATKSPPSGCSRRL*QRRPSG
Trigger: ACCTGAGGGTCTTCTTTGTCACAGCCTCCTGGAGCA...CCCTGAGGGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR TCA 90 bp GTCTGGGTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCCTGCTCCAGGAGGCTGTaGCAAAGAAGACCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: VWVERLVGPRANATKSPPCSRRL*QRRPSG
Trigger: ACCTGAGGGTCTTCTTTGTCACAGCCTCCTGGAGCA...GGGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTACCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR TCA 90 bp TGGTACCAGAAGCCTATGGCTTTTAGTTATGGTTGTGGCTGGTGGAGGCTCTGGGGCTCGAACATGCCCTaGGCATCGCCCACACGCAGG +
Preference number: 4 (lower is better)
Translates to: WYQKPMAFSYGCGWWRLWGSNMP*ASPTRR
Trigger: CCTGCGTGTGGGCGATGCTCAGGGCATGTTCGAGCC...CCAGAGCCTCCACCAGCCACAACCATAACTAAAAGCCATAGGCTTCTGGTACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
CDS-3UTR TCA 90 bp GGAAAGCAGAAGGCTGTGAGGGTGGCAGGGTCACCTAAGGTCGCAAGGAGTGGGCTTGTCTCCATTCCCTaGGATGCCTCGCTTAAGCCA +
Preference number: 4 (lower is better)
Translates to: GKQKAVRVAGSPKVARSGLVSIP*DASLKP
Trigger: TGGCTTAAGCGAGGCATCTCAGGGAATGGAGACAAG...CCCACTCCTTGCGACCTTAGGTGACCCTGCCACCCTCACAGCCTTCTGCTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168693.3
CDS-3UTR GCA 90 bp TGGTACCAGAAGCCTATGGCTTTTAGTTATGGTTGTGGCTGGTGGAGGCTCTGGCACTGCCCACGATGGTaGCTGGGCCTAGCTCACCGG +
Preference number: 4 (lower is better)
Translates to: WYQKPMAFSYGCGWWRLWHCPRW*LGLAHR
Trigger: CCGGTGAGCTAGGCCCAGGCACCATCGTGGGCAGTG...CCAGAGCCTCCACCAGCCACAACCATAACTAAAAGCCATAGGCTTCTGGTACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp AGTGATGCTGATGAGCAAGGGGTGAGAAGGGCCGTGGGTAATGGGTCTGATGCATGCCGTCCAGCTCGATaGTCTTGGGTGGGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: SDADEQGVRRAVGNGSDACRPAR*SWVGLP
Trigger: AGGGAGACCCACCCAAGAGCATCGAGCTGGACGGCA...TGCATCAGACCCATTACCCACGGCCCTTCTCACCCCTTGCTCATCAGCATCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp AGTGATGCTGATGAGCAAGGGGTGAGAAGGGCCGTGGGTAATGGGTCTGATGCACATCCGCAGCATGTCTaGGCAGCACATTGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: SDADEQGVRRAVGNGSDAHPQHV*AAHCPH
Trigger: GTGCGGGCAATGTGCTGCGCAGACATGCTGCGGATG...TGCATCAGACCCATTACCCACGGCCCTTCTCACCCCTTGCTCATCAGCATCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp AGTGATGCTGATGAGCAAGGGGTGAGAAGGGCCGTGGGTAATGGGTCTGATGCACGTAGAAGGTGCTGTTaGCCTCACCGCCCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: SDADEQGVRRAVGNGSDARRRCC*PHRPGK
Trigger: CTTGCCAGGGCGGTGAGGGCAACAGCACCTTCTACG...TGCATCAGACCCATTACCCACGGCCCTTCTCACCCCTTGCTCATCAGCATCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp TTGGTTGATGGGTGGGGCATGGTACTAGAAACCTATGGCTGCTTGGCAGGGGCGCGCGCACATCCACAGTaGCCATGCACTCGCTCACAT +
Preference number: 4 (lower is better)
Translates to: LVDGWGMVLETYGCLAGARAHPQ*PCTRSH
Trigger: ATGTGAGCGAGTGCATGGGCACTGTGGATGTGCGCG...CGCCCCTGCCAAGCAGCCATAGGTTTCTAGTACCATGCCCCACCCATCAACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp GCAAAGGCTGCCGGGTCTGTTTCCTGTGGTCTAGATGTCGGAGCTGCTACCATCTGGCTTGCCCATCTCTaGTATCCTCTGGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: AKAAGSVSCGLDVGAATIWLAHL*YPLGLL
Trigger: GAGGAGGCCCAGAGGATAGCAGAGATGGGCAAGCCA...GATGGTAGCAGCTCCGACATCTAGACCACAGGAAACAGACCCGGCAGCCTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp GTCTGGGTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCCCCGGTACAACAGCACTaGGATGCACACGAAGGCGAA +
Preference number: 4 (lower is better)
Translates to: VWVERLVGPRANATKSPPPVQQH*DAHEGE
Trigger: TTCGCCTTCGTGTGCATCGCAGTGCTGTTGTACCGG...GGGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTACCCAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp AGTGATGCTGATGAGCAAGGGGTGAGAAGGGCCGTGGGTAATGGGTCTGATGCAGCTTCCCCCAAGCAGTaGGGTACCCCCAGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: SDADEQGVRRAVGNGSDAASPKQ*GTPRRR
Trigger: TCTCCTTCTGGGGGTACCCCACTGCTTGGGGGAAGC...TGCATCAGACCCATTACCCACGGCCCTTCTCACCCCTTGCTCATCAGCATCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp GTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCCTCAGGGACCTTGGCAGCCTTCTaGGCTGGCATCGCTGTCATT +
Preference number: 4 (lower is better)
Translates to: VERLVGPRANATKSPPSGTLAAF*AGIAVI
Trigger: AATGACAGCGATGCCAGCCCAGAAGGCTGCCAAGGT...CCCTGAGGGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp AGTGGGTTCAAGATGTGCCTCCTCTGGCTAAGCCTGGGGGACAGATACTCCAAAGCACCGTGCCCACGCTaGTCTCCCCATTTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: SGFKMCLLWLSLGDRYSKAPCPR*SPHLPW
Trigger: CCAAGGCAAATGGGGAGACCAGCGTGGGCACGGTGC...TTTGGAGTATCTGTCCCCCAGGCTTAGCCAGAGGAGGCACATCTTGAACCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp AGTGATGCTGATGAGCAAGGGGTGAGAAGGGCCGTGGGTAATGGGTCTGATGCACCTAGCTCACCGGCCTaGAAGTTGTGGCCACAGACC +
Preference number: 4 (lower is better)
Translates to: SDADEQGVRRAVGNGSDAPSSPA*KLWPQT
Trigger: GGTCTGTGGCCACAACTTCCAGGCCGGTGAGCTAGG...TGCATCAGACCCATTACCCACGGCCCTTCTCACCCCTTGCTCATCAGCATCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp CACACAGGCTCCTCCCTCCAAGGCGTGGCTAGGCTCTCAGAGGTAGTGGAGGGTGTTCTCCCCAAGAACTaGCTTGCCCATCTCTGCTAT +
Preference number: 4 (lower is better)
Translates to: HTGSSLQGVARLSEVVEGVLPKN*LAHLCY
Trigger: ATAGCAGAGATGGGCAAGCCAGTTCTTGGGGAGAAC...ACCCTCCACTACCTCTGAGAGCCTAGCCACGCCTTGGAGGGAGGAGCCTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp GTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCCTCAGGGACACGTTCACCGCATTaGAGCCGGTCACGTTACCGA +
Preference number: 4 (lower is better)
Translates to: VERLVGPRANATKSPPSGTRSPH*SRSRYR
Trigger: TCGGTAACGTGACCGGCTCCAATGCGGTGAACGTGT...CCCTGAGGGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp TCTTCGAGGGTCCTGCCCAGATTGGCTGGCACTGAGAGCAAAATAAACCTTCTAGGAAGAGAGCGGTGGTaGCCAGCTTGGGTCCCCGCG +
Preference number: 4 (lower is better)
Translates to: SSRVLPRLAGTESKINLLGRERW*PAWVPA
Trigger: CGCGGGGACCCAAGCTGGCCACCACCGCTCTCTTCC...TAGAAGGTTTATTTTGCTCTCAGTGCCAGCCAATCTGGGCAGGACCCTCGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR TCA 90 bp AGTCTGGGTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCGGAAGAAGATCAGTGTaGGCAGTGCCTCCCACACCT +
Preference number: 4 (lower is better)
Translates to: SLGRETGGSKSKCHQVPTGRRSV*AVPPTP
Trigger: AGGTGTGGGAGGCACTGCTCACACTGATCTTCTTCC...GGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTACCCAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR TCA 90 bp AGGCTCGGTGCCCAGAAAGACCGAGAAGTAGTGTCTGGCCAGGGGACTCGGGTTAAACTGCTCCCTCCATaGGTGAGTCCCAATCACCAA +
Preference number: 4 (lower is better)
Translates to: RLGAQKDREVVSGQGTRVKLLPP*VSPNHQ
Trigger: TTGGTGATTGGGACTCACTCATGGAGGGAGCAGTTT...AACCCGAGTCCCCTGGCCAGACACTACTTCTCGGTCTTTCTGGGCACCGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp GTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCCTCAGGGGCTGGTCTCCCCATTTaGCTTGGTGATGGTGATCTC +
Preference number: 4 (lower is better)
Translates to: VERLVGPRANATKSPPSGAGLPI*LGDGDL
Trigger: GAGATCACCATCACCAAGGCAAATGGGGAGACCAGC...CCCTGAGGGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp AGAATACTGTCAGGGGAGGTCAGGTGGGCTCCCTTTGAGTCTCAGTCTCATCCATGCCGTCCAGCTCGATaGTCTTGGGTGGGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: RILSGEVRWAPFESQSHPCRPAR*SWVGLP
Trigger: AGGGAGACCCACCCAAGAGCATCGAGCTGGACGGCA...TGGATGAGACTGAGACTCAAAGGGAGCCCACCTGACCTCCCCTGACAGTATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp CTGTCAGGGGAGGTCAGGTGGGCTCCCTTTGAGTCTCAGTCTCATCCACTAAGCCTGCTGGTGCAGCAGTaGATAGTACTTGGCGATGCC +
Preference number: 4 (lower is better)
Translates to: LSGEVRWAPFESQSHPLSLLVQQ*IVLGDA
Trigger: GGCATCGCCAAGTACTATGCACTGCTGCACCAGCAG...GCTTAGTGGATGAGACTGAGACTCAAAGGGAGCCCACCTGACCTCCCCTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp AGTGATGCTGATGAGCAAGGGGTGAGAAGGGCCGTGGGTAATGGGTCTGATGCAAGTCCACGTAGAAGGTaGTGTTGCCCTCACCGCCCT +
Preference number: 4 (lower is better)
Translates to: SDADEQGVRRAVGNGSDASPRRR*CCPHRP
Trigger: AGGGCGGTGAGGGCAACAGCACCTTCTACGTGGACT...TGCATCAGACCCATTACCCACGGCCCTTCTCACCCCTTGCTCATCAGCATCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp AGTGATGCTGATGAGCAAGGGGTGAGAAGGGCCGTGGGTAATGGGTCTGATGCACGCGCACATCCACAGTaGCCATGCACTCGCTCACAT +
Preference number: 4 (lower is better)
Translates to: SDADEQGVRRAVGNGSDARAHPQ*PCTRSH
Trigger: ATGTGAGCGAGTGCATGGGCACTGTGGATGTGCGCG...TGCATCAGACCCATTACCCACGGCCCTTCTCACCCCTTGCTCATCAGCATCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp GTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCCTCAGGGCTCTGGGCCTCCTCCTaGTCTGCAGTTATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: VERLVGPRANATKSPPSGLWASS*SAVIFL
Trigger: CAAGAAGATAACTGCAGAGCAGGAGGAGGCCCAGAG...CCCTGAGGGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp GGCAGAGATGGATGGCGTCCTGGGATGGCACAGCCTCCCTCTGAGGTACCTAGGTGCGCTTACGGTAACTaGCTCTATAAACTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: GRDGWRPGMAQPPSEVPRCAYGN*LYKLLP
Trigger: AGGGAGCAGTTTATAGAGGCAGTTACCGTAAGCGCA...CCTAGGTACCTCAGAGGGAGGCTGTGCCATCCCAGGACGCCATCCATCTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp AGTGATGCTGATGAGCAAGGGGTGAGAAGGGCCGTGGGTAATGGGTCTGATGCATGTCAGGGATGGAGGTaGCCAGGGCTACGAAGACCA +
Preference number: 4 (lower is better)
Translates to: SDADEQGVRRAVGNGSDACQGWR*PGLRRP
Trigger: TGGTCTTCGTAGCCCTGGGCACCTCCATCCCTGACA...TGCATCAGACCCATTACCCACGGCCCTTCTCACCCCTTGCTCATCAGCATCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp AGTCTGGGTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCACAACAGCACTGCGATaGACACGAAGGCGAAGACGG +
Preference number: 4 (lower is better)
Translates to: SLGRETGGSKSKCHQVPTTTALR*TRRRRR
Trigger: CCGTCTTCGCCTTCGTGTGCATCGCAGTGCTGTTGT...GGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTACCCAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp CTGTCAGGGGAGGTCAGGTGGGCTCCCTTTGAGTCTCAGTCTCATCCACTAAGCACCTTGGCAGCCTTCTaGGCTGGCATCGCTGTCATT +
Preference number: 4 (lower is better)
Translates to: LSGEVRWAPFESQSHPLSTLAAF*AGIAVI
Trigger: AATGACAGCGATGCCAGCCCAGAAGGCTGCCAAGGT...GCTTAGTGGATGAGACTGAGACTCAAAGGGAGCCCACCTGACCTCCCCTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp CTGTCAGGGGAGGTCAGGTGGGCTCCCTTTGAGTCTCAGTCTCATCCACTAAGCAGTGCCTCCCACACCTaGACTACACCTGGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: LSGEVRWAPFESQSHPLSSASHT*TTPGEK
Trigger: TTTCTCCCCAGGTGTAGTCCAGGTGTGGGAGGCACT...GCTTAGTGGATGAGACTGAGACTCAAAGGGAGCCCACCTGACCTCCCCTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp AGAATACTGTCAGGGGAGGTCAGGTGGGCTCCCTTTGAGTCTCAGTCTCATCCACTGTCATCAGCCGCGTaGCCTGGATGCGGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: RILSGEVRWAPFESQSHPLSSAA*PGCGRR
Trigger: CCTTCTACCGCATCCAGGCCACGCGGCTGATGACAG...TGGATGAGACTGAGACTCAAAGGGAGCCCACCTGACCTCCCCTGACAGTATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp GTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCCTCAGGGGGCAGTGATAGAGGCTaGGCTCAAAGAAGATGCGAC +
Preference number: 4 (lower is better)
Translates to: VERLVGPRANATKSPPSGGSDRG*AQRRCD
Trigger: GTCGCATCTTCTTTGAGCCCAGCCTCTATCACTGCC...CCCTGAGGGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp ATGTGCCTCCTCTGGCTAAGCCTGGGGGACAGATACTCCAAACGTCCCTCCTCCGGCAGTGATAGAGGCTaGGCTCAAAGAAGATGCGAC +
Preference number: 4 (lower is better)
Translates to: MCLLWLSLGDRYSKRPSSGSDRG*AQRRCD
Trigger: GTCGCATCTTCTTTGAGCCCAGCCTCTATCACTGCC...GGAGGAGGGACGTTTGGAGTATCTGTCCCCCAGGCTTAGCCAGAGGAGGCACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp AGAATACTGTCAGGGGAGGTCAGGTGGGCTCCCTTTGAGTCTCAGTCTCATCCACCTCGCTTAAGCCACTaGGGCTGGCCCAGCTCAATG +
Preference number: 4 (lower is better)
Translates to: RILSGEVRWAPFESQSHPPRLSH*GWPSSM
Trigger: CATTGAGCTGGGCCAGCCCCAGTGGCTTAAGCGAGG...TGGATGAGACTGAGACTCAAAGGGAGCCCACCTGACCTCCCCTGACAGTATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR TCA 90 bp TTGGTTGATGGGTGGGGCATGGTACTAGAAACCTATGGCTGCTTGGCAGGGGCGGGCCACAGACCTCGATaGCAGTCAACAGAATCTCAG +
Preference number: 4 (lower is better)
Translates to: LVDGWGMVLETYGCLAGAGHRPR*QSTESQ
Trigger: CTGAGATTCTGTTGACTGTCATCGAGGTCTGTGGCC...CGCCCCTGCCAAGCAGCCATAGGTTTCTAGTACCATGCCCCACCCATCAACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
CDS-3UTR TCA 90 bp AGTGGGTTCAAGATGTGCCTCCTCTGGCTAAGCCTGGGGGACAGATACTCCAAAAGACCCTCAGGTGCTTaGTCTTACGGCTCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: SGFKMCLLWLSLGDRYSKRPSGA*SYGSRQ
Trigger: CTGGCGAGAGCCGTAAGATCAAGCACCTGAGGGTCT...TTTGGAGTATCTGTCCCCCAGGCTTAGCCAGAGGAGGCACATCTTGAACCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR TCA 90 bp GAAAATGCAGGTGGCCTACCAACAGATGTATGGCCTGCAAAGTTAAAAATGCCCCGTCGTCCAGGATGGTaGCAGTGGCCAGCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: ENAGGLPTDVWPAKLKMPRRPGW*QWPAAA
Trigger: CGCCGCTGCTGGCCACTGTCACCATCCTGGACGACG...GGGCATTTTTAACTTTGCAGGCCATACATCTGTTGGTAGGCCACCTGCATTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp TCTTCGAGGGTCCTGCCCAGATTGGCTGGCACTGAGAGCAAAATAAACCTTCTATCCAGATGCGCACCGTaGCCACGCTGGTCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: SSRVLPRLAGTESKINLLSRCAP*PRWSPH
Trigger: ATGGGGAGACCAGCGTGGGCACGGTGCGCATCTGGA...TAGAAGGTTTATTTTGCTCTCAGTGCCAGCCAATCTGGGCAGGACCCTCGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp TGGTACCAGAAGCCTATGGCTTTTAGTTATGGTTGTGGCTGGTGGAGGCTCTGGCACTGCGAGGGTCGGTaGGGTAGCGCTTGTACACGT +
Preference number: 4 (lower is better)
Translates to: WYQKPMAFSYGCGWWRLWHCEGR*GSACTR
Trigger: ACGTGTACAAGCGCTACCGCACCGACCCTCGCAGTG...CCAGAGCCTCCACCAGCCACAACCATAACTAAAAGCCATAGGCTTCTGGTACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp AGAATACTGTCAGGGGAGGTCAGGTGGGCTCCCTTTGAGTCTCAGTCTCATCCAAGTCCACGTAGAAGGTaGTGTTGCCCTCACCGCCCT +
Preference number: 4 (lower is better)
Translates to: RILSGEVRWAPFESQSHPSPRRR*CCPHRP
Trigger: AGGGCGGTGAGGGCAACAGCACCTTCTACGTGGACT...TGGATGAGACTGAGACTCAAAGGGAGCCCACCTGACCTCCCCTGACAGTATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp TTGGTTGATGGGTGGGGCATGGTACTAGAAACCTATGGCTGCTTGGCAGGGGCGCTCTGGGCCTCCTCCTaGTCTGCAGTTATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LVDGWGMVLETYGCLAGALWASS*SAVIFL
Trigger: CAAGAAGATAACTGCAGAGCAGGAGGAGGCCCAGAG...CGCCCCTGCCAAGCAGCCATAGGTTTCTAGTACCATGCCCCACCCATCAACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp AGTGGGTTCAAGATGTGCCTCCTCTGGCTAAGCCTGGGGGACAGATACTCCAAATGTCAGGGATGGAGGTaGCCAGGGCTACGAAGACCA +
Preference number: 4 (lower is better)
Translates to: SGFKMCLLWLSLGDRYSKCQGWR*PGLRRP
Trigger: TGGTCTTCGTAGCCCTGGGCACCTCCATCCCTGACA...TTTGGAGTATCTGTCCCCCAGGCTTAGCCAGAGGAGGCACATCTTGAACCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp AGTGGGTTCAAGATGTGCCTCCTCTGGCTAAGCCTGGGGGACAGATACTCCAAACCGGCCTGGAAGTTGTaGCCACAGACCTCGATGACA +
Preference number: 4 (lower is better)
Translates to: SGFKMCLLWLSLGDRYSKPAWKL*PQTSMT
Trigger: TGTCATCGAGGTCTGTGGCCACAACTTCCAGGCCGG...TTTGGAGTATCTGTCCCCCAGGCTTAGCCAGAGGAGGCACATCTTGAACCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp TGGTACCAGAAGCCTATGGCTTTTAGTTATGGTTGTGGCTGGTGGAGGCTCTGGCTCGATGCTCTTGGGTaGGTCTCCCTCTGCCCCGAT +
Preference number: 4 (lower is better)
Translates to: WYQKPMAFSYGCGWWRLWLDALG*VSLCPD
Trigger: ATCGGGGCAGAGGGAGACCCACCCAAGAGCATCGAG...CCAGAGCCTCCACCAGCCACAACCATAACTAAAAGCCATAGGCTTCTGGTACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp TCATCAACCTCAGCTCCCTCTGGCTCAGGCAAATTAGAGTCCTTCTCTTTTGCATTGCCCTCACCGCCCTaGCAAGCCACGGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: SSTSAPSGSGKLESFSFALPSPP*QATDSS
Trigger: GCTGCTGTCCGTGGCTTGCCAGGGCGGTGAGGGCAA...TGCAAAAGAGAAGGACTCTAATTTGCCTGAGCCAGAGGGAGCTGAGGTTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
CDS-3UTR TCA 90 bp AGTGATGCTGATGAGCAAGGGGTGAGAAGGGCCGTGGGTAATGGGTCTGATGCAGGCCACAGACCTCGATaGCAGTCAACAGAATCTCAG +
Preference number: 4 (lower is better)
Translates to: SDADEQGVRRAVGNGSDAGHRPR*QSTESQ
Trigger: CTGAGATTCTGTTGACTGTCATCGAGGTCTGTGGCC...TGCATCAGACCCATTACCCACGGCCCTTCTCACCCCTTGCTCATCAGCATCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR TCA 90 bp TGGTACCAGAAGCCTATGGCTTTTAGTTATGGTTGTGGCTGGTGGAGGCTCTGGAGACCCTCAGGTGCTTaGTCTTACGGCTCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: WYQKPMAFSYGCGWWRLWRPSGA*SYGSRQ
Trigger: CTGGCGAGAGCCGTAAGATCAAGCACCTGAGGGTCT...CCAGAGCCTCCACCAGCCACAACCATAACTAAAAGCCATAGGCTTCTGGTACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
CDS-3UTR TCA 90 bp AGTCTGGGTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCGCTGGCCCAGCTCAATaGAGAAGTTGTCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SLGRETGGSKSKCHQVPTAGPAQ*RSCPSS
Trigger: AGAAGAAGGACAACTTCTTCATTGAGCTGGGCCAGC...GGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTACCCAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp TCATCAACCTCAGCTCCCTCTGGCTCAGGCAAATTAGAGTCCTTCTCTTTTGCACGTCGGGCTCGAACATaGCCTGAGCATCGCCCACAC +
Preference number: 4 (lower is better)
Translates to: SSTSAPSGSGKLESFSFARRART*PEHRPH
Trigger: GTGTGGGCGATGCTCAGGGCATGTTCGAGCCCGACG...TGCAAAAGAGAAGGACTCTAATTTGCCTGAGCCAGAGGGAGCTGAGGTTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp GTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCCTCAGGGTGCGCTTACGGTAACTaGCTCTATAAACTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: VERLVGPRANATKSPPSGCAYGN*LYKLLP
Trigger: AGGGAGCAGTTTATAGAGGCAGTTACCGTAAGCGCA...CCCTGAGGGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp GAAAATGCAGGTGGCCTACCAACAGATGTATGGCCTGCAAAGTTAAAAATGCCCGCAGCGCGGCCACCTTaGTGGCGAACGTGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: ENAGGLPTDVWPAKLKMPAARPP*WRTCQG
Trigger: TCCCTGACACGTTCGCCAGCAAGGTGGCCGCGCTGC...GGGCATTTTTAACTTTGCAGGCCATACATCTGTTGGTAGGCCACCTGCATTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp AGAATACTGTCAGGGGAGGTCAGGTGGGCTCCCTTTGAGTCTCAGTCTCATCCACCGGTACAACAGCACTaGGATGCACACGAAGGCGAA +
Preference number: 4 (lower is better)
Translates to: RILSGEVRWAPFESQSHPPVQQH*DAHEGE
Trigger: TTCGCCTTCGTGTGCATCGCAGTGCTGTTGTACCGG...TGGATGAGACTGAGACTCAAAGGGAGCCCACCTGACCTCCCCTGACAGTATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp TCTTCGAGGGTCCTGCCCAGATTGGCTGGCACTGAGAGCAAAATAAACCTTCTACCTAGCTCACCGGCCTaGAAGTTGTGGCCACAGACC +
Preference number: 4 (lower is better)
Translates to: SSRVLPRLAGTESKINLLPSSPA*KLWPQT
Trigger: GGTCTGTGGCCACAACTTCCAGGCCGGTGAGCTAGG...TAGAAGGTTTATTTTGCTCTCAGTGCCAGCCAATCTGGGCAGGACCCTCGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp GAAAATGCAGGTGGCCTACCAACAGATGTATGGCCTGCAAAGTTAAAAATGCCCTTGCCCTCACCGCCCTaGCAAGCCACGGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: ENAGGLPTDVWPAKLKMPLPSPP*QATDSS
Trigger: GCTGCTGTCCGTGGCTTGCCAGGGCGGTGAGGGCAA...GGGCATTTTTAACTTTGCAGGCCATACATCTGTTGGTAGGCCACCTGCATTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp CTGTCAGGGGAGGTCAGGTGGGCTCCCTTTGAGTCTCAGTCTCATCCACTAAGCGTTCTCCCCAAGAACTaGCTTGCCCATCTCTGCTAT +
Preference number: 4 (lower is better)
Translates to: LSGEVRWAPFESQSHPLSVLPKN*LAHLCY
Trigger: ATAGCAGAGATGGGCAAGCCAGTTCTTGGGGAGAAC...GCTTAGTGGATGAGACTGAGACTCAAAGGGAGCCCACCTGACCTCCCCTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp AGTGGGTTCAAGATGTGCCTCCTCTGGCTAAGCCTGGGGGACAGATACTCCAAAACACGTTCACCGCATTaGAGCCGGTCACGTTACCGA +
Preference number: 4 (lower is better)
Translates to: SGFKMCLLWLSLGDRYSKTRSPH*SRSRYR
Trigger: TCGGTAACGTGACCGGCTCCAATGCGGTGAACGTGT...TTTGGAGTATCTGTCCCCCAGGCTTAGCCAGAGGAGGCACATCTTGAACCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR TCA 90 bp GGCAGAGATGGATGGCGTCCTGGGATGGCACAGCCTCCCTCTGAGGTACCTAGGAGAAAACTGCTAGAATaGGATAAAGCCAGACATAGG +
Preference number: 4 (lower is better)
Translates to: GRDGWRPGMAQPPSEVPRRKLLE*DKARHR
Trigger: CCTATGTCTGGCTTTATCTCATTCTAGCAGTTTTCT...CCTAGGTACCTCAGAGGGAGGCTGTGCCATCCCAGGACGCCATCCATCTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp TCTTCGAGGGTCCTGCCCAGATTGGCTGGCACTGAGAGCAAAATAAACCTTCTACAGTGCCCACGAATGTaGCGTCCAGCTCGATGCTCT +
Preference number: 4 (lower is better)
Translates to: SSRVLPRLAGTESKINLLQCPRM*RPARCS
Trigger: AGAGCATCGAGCTGGACGGCACATTCGTGGGCACTG...TAGAAGGTTTATTTTGCTCTCAGTGCCAGCCAATCTGGGCAGGACCCTCGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp GTCTGGGTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCCTTATCCGGGTGCTTCTaGTTCAAGTCCTTAAGGATC +
Preference number: 4 (lower is better)
Translates to: VWVERLVGPRANATKSPPLSGCF*FKSLRI
Trigger: GATCCTTAAGGACTTGAAGCAGAAGCACCCGGATAA...GGGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTACCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp AGAATACTGTCAGGGGAGGTCAGGTGGGCTCCCTTTGAGTCTCAGTCTCATCCAGGCCTCCTCCTGCTCTaGAGTTATCTTCTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: RILSGEVRWAPFESQSHPGLLLL*SYLLVS
Trigger: GGAGACAAGAAGATAACTGCAGAGCAGGAGGAGGCC...TGGATGAGACTGAGACTCAAAGGGAGCCCACCTGACCTCCCCTGACAGTATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp AGTGGGTTCAAGATGTGCCTCCTCTGGCTAAGCCTGGGGGACAGATACTCCAAATTAAGCCACTGGGGCTaGCCCAGCTCAATGAAGAAG +
Preference number: 4 (lower is better)
Translates to: SGFKMCLLWLSLGDRYSKLSHWG*PSSMKK
Trigger: CTTCTTCATTGAGCTGGGCCAGCCCCAGTGGCTTAA...TTTGGAGTATCTGTCCCCCAGGCTTAGCCAGAGGAGGCACATCTTGAACCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp AGTCTGGGTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCAGTAAGCCTCCAGGCTaGAGAAGAGAATGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: SLGRETGGSKSKCHQVPTSKPPG*RRECRG
Trigger: TCCTCTACATTCTCTTCTCCAGCCTGGAGGCTTACT...GGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTACCCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR TCA 90 bp GGAAAGCAGAAGGCTGTGAGGGTGGCAGGGTCACCTAAGGTCGCAAGGAGTGGGAGAAAACTGCTAGAATaGGATAAAGCCAGACATAGG +
Preference number: 4 (lower is better)
Translates to: GKQKAVRVAGSPKVARSGRKLLE*DKARHR
Trigger: CCTATGTCTGGCTTTATCTCATTCTAGCAGTTTTCT...CCCACTCCTTGCGACCTTAGGTGACCCTGCCACCCTCACAGCCTTCTGCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR TCA 90 bp GAAAATGCAGGTGGCCTACCAACAGATGTATGGCCTGCAAAGTTAAAAATGCCCCACGGACAGCAGCACTaGCCCGCAGTTTTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: ENAGGLPTDVWPAKLKMPHGQQH*PAVFQA
Trigger: TGCCTGGAAAACTGCGGGTCAGTGCTGCTGTCCGTG...GGGCATTTTTAACTTTGCAGGCCATACATCTGTTGGTAGGCCACCTGCATTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR TCA 90 bp GTCTGGGTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCCTCCACTATCTTGACCTaGAGAGTTTTCATGGTCTCA +
Preference number: 4 (lower is better)
Translates to: VWVERLVGPRANATKSPPSTILT*RVFMVS
Trigger: TGAGACCATGAAAACTCTTCAGGTCAAGATAGTGGA...GGGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTACCCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR TCA 90 bp GTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCCTCAGGGCATCATCCACTATCTTaGCCTGAAGAGTTTTCATGG +
Preference number: 4 (lower is better)
Translates to: VERLVGPRANATKSPPSGHHPLS*PEEFSW
Trigger: CCATGAAAACTCTTCAGGTCAAGATAGTGGATGATG...CCCTGAGGGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR TCA 90 bp AGTGGGTTCAAGATGTGCCTCCTCTGGCTAAGCCTGGGGGACAGATACTCCAAAAAACTGCTCCCTCCATaGGTGAGTCCCAATCACCAA +
Preference number: 4 (lower is better)
Translates to: SGFKMCLLWLSLGDRYSKKLLPP*VSPNHQ
Trigger: TTGGTGATTGGGACTCACTCATGGAGGGAGCAGTTT...TTTGGAGTATCTGTCCCCCAGGCTTAGCCAGAGGAGGCACATCTTGAACCCACT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp TGGTACCAGAAGCCTATGGCTTTTAGTTATGGTTGTGGCTGGTGGAGGCTCTGGGCTGGTCTCCCCATTTaGCTTGGTGATGGTGATCTC +
Preference number: 4 (lower is better)
Translates to: WYQKPMAFSYGCGWWRLWAGLPI*LGDGDL
Trigger: GAGATCACCATCACCAAGGCAAATGGGGAGACCAGC...CCAGAGCCTCCACCAGCCACAACCATAACTAAAAGCCATAGGCTTCTGGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp AGTCTGGGTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCTTATCCGGGTGCTTCTaGTTCAAGTCCTTAAGGATC +
Preference number: 4 (lower is better)
Translates to: SLGRETGGSKSKCHQVPTLSGCF*FKSLRI
Trigger: GATCCTTAAGGACTTGAAGCAGAAGCACCCGGATAA...GGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTACCCAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp GAAAATGCAGGTGGCCTACCAACAGATGTATGGCCTGCAAAGTTAAAAATGCCCGTCTGCGCAGCACATTaGCCGCACCTGTCATCAGCC +
Preference number: 4 (lower is better)
Translates to: ENAGGLPTDVWPAKLKMPVCAAH*PHLSSA
Trigger: GGCTGATGACAGGTGCGGGCAATGTGCTGCGCAGAC...GGGCATTTTTAACTTTGCAGGCCATACATCTGTTGGTAGGCCACCTGCATTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp AACTTCCCACGGGAGGACTGTTCAGGCAGAATTTCAAAGTTTTATGGCAGTTTTCGCCCAGTATACCGCTaGCACCGACCAGGCCACACC +
Preference number: 4 (lower is better)
Translates to: NFPREDCSGRISKFYGSFRPVYR*HRPGHT
Trigger: GGTGTGGCCTGGTCGGTGGCAGCGGTATACTGGGCG...AAAACTGCCATAAAACTTTGAAATTCTGCCTGAACAGTCCTCCCGTGGGAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp GAAAATGCAGGTGGCCTACCAACAGATGTATGGCCTGCAAAGTTAAAAATGCCCGCTTCCCCCAAGCAGTaGGGTACCCCCAGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: ENAGGLPTDVWPAKLKMPASPKQ*GTPRRR
Trigger: TCTCCTTCTGGGGGTACCCCACTGCTTGGGGGAAGC...GGGCATTTTTAACTTTGCAGGCCATACATCTGTTGGTAGGCCACCTGCATTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR TCA 90 bp GAAAATGCAGGTGGCCTACCAACAGATGTATGGCCTGCAAAGTTAAAAATGCCCAGATGTCGTCGTCGATaGTCCCGATGCGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: ENAGGLPTDVWPAKLKMPRCRRR*SRCAGP
Trigger: AGGACCTGCGCATCGGGATCATCGACGACGACATCT...GGGCATTTTTAACTTTGCAGGCCATACATCTGTTGGTAGGCCACCTGCATTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR GCA 90 bp TCTTCGAGGGTCCTGCCCAGATTGGCTGGCACTGAGAGCAAAATAAACCTTCTAGGCCTCCTCCTGCTCTaGAGTTATCTTCTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: SSRVLPRLAGTESKINLLGLLLL*SYLLVS
Trigger: GGAGACAAGAAGATAACTGCAGAGCAGGAGGAGGCC...TAGAAGGTTTATTTTGCTCTCAGTGCCAGCCAATCTGGGCAGGACCCTCGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR TCA 90 bp GAAAATGCAGGTGGCCTACCAACAGATGTATGGCCTGCAAAGTTAAAAATGCCCGGAAGAAGATCAGTGTaGGCAGTGCCTCCCACACCT +
Preference number: 4 (lower is better)
Translates to: ENAGGLPTDVWPAKLKMPGRRSV*AVPPTP
Trigger: AGGTGTGGGAGGCACTGCTCACACTGATCTTCTTCC...GGGCATTTTTAACTTTGCAGGCCATACATCTGTTGGTAGGCCACCTGCATTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR TCA 90 bp GAAAATGCAGGTGGCCTACCAACAGATGTATGGCCTGCAAAGTTAAAAATGCCCGCTGGCCCAGCTCAATaGAGAAGTTGTCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: ENAGGLPTDVWPAKLKMPAGPAQ*RSCPSS
Trigger: AGAAGAAGGACAACTTCTTCATTGAGCTGGGCCAGC...GGGCATTTTTAACTTTGCAGGCCATACATCTGTTGGTAGGCCACCTGCATTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR TCA 90 bp AGTGGGTTCAAGATGTGCCTCCTCTGGCTAAGCCTGGGGGACAGATACTCCAAAGGTTCGTTTTCTTTATaGGTTTATCCACCGTGTTCT +
Preference number: 4 (lower is better)
Translates to: SGFKMCLLWLSLGDRYSKGSFSL*VYPPCS
Trigger: AGAACACGGTGGATAAACTCATAAAGAAAACGAACC...TTTGGAGTATCTGTCCCCCAGGCTTAGCCAGAGGAGGCACATCTTGAACCCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR TCA 90 bp AGAATACTGTCAGGGGAGGTCAGGTGGGCTCCCTTTGAGTCTCAGTCTCATCCAGGTTCGTTTTCTTTATaGGTTTATCCACCGTGTTCT +
Preference number: 4 (lower is better)
Translates to: RILSGEVRWAPFESQSHPGSFSL*VYPPCS
Trigger: AGAACACGGTGGATAAACTCATAAAGAAAACGAACC...TGGATGAGACTGAGACTCAAAGGGAGCCCACCTGACCTCCCCTGACAGTATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp GAAAATGCAGGTGGCCTACCAACAGATGTATGGCCTGCAAAGTTAAAAATGCCCAGTAAGCCTCCAGGCTaGAGAAGAGAATGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: ENAGGLPTDVWPAKLKMPSKPPG*RRECRG
Trigger: TCCTCTACATTCTCTTCTCCAGCCTGGAGGCTTACT...GGGCATTTTTAACTTTGCAGGCCATACATCTGTTGGTAGGCCACCTGCATTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CCA 90 bp GAAAATGCAGGTGGCCTACCAACAGATGTATGGCCTGCAAAGTTAAAAATGCCCTTGTCTCCATTCCCTTaGTTGAGTAGCAGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: ENAGGLPTDVWPAKLKMPLSPFP*LSSRAE
Trigger: CTCAGCTCTGCTACTCAACCAAGGGAATGGAGACAA...GGGCATTTTTAACTTTGCAGGCCATACATCTGTTGGTAGGCCACCTGCATTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
CDS-3UTR TCA 90 bp GAAAATGCAGGTGGCCTACCAACAGATGTATGGCCTGCAAAGTTAAAAATGCCCCATCATCCACTATCTTaGCCTGAAGAGTTTTCATGG +
Preference number: 4 (lower is better)
Translates to: ENAGGLPTDVWPAKLKMPHHPLS*PEEFSW
Trigger: CCATGAAAACTCTTCAGGTCAAGATAGTGGATGATG...GGGCATTTTTAACTTTGCAGGCCATACATCTGTTGGTAGGCCACCTGCATTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 90 bp CGCCACGGGCCGTGCCGTCCACTGTGCGGTAGGGGAGGCGTACAGTaGCACGGGCGCCCGAGCTGCGAACCACGCGCACATCCACAGTGC +
Preference number: 5 (lower is better)
Translates to: RHGPCRPLCGRGGVQ*HGRPSCEPRAHPQC
Trigger: GCACTGTGGATGTGCGCGTGGTTCGCAGCTCGGGCGCCCGTGGCACTGTACGCCTCCCCTACCGCACAGTGGACGGCACGGCCCGTGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS TCA 90 bp GGTCCTGGAAGGAGAAGATGCCCGCGTGGTCGTCGTCCAGGATGGTaGCAGTGGCCAGCAGCGGCGCCACCAGCCGCCCCTTGGGCCGCC +
Preference number: 5 (lower is better)
Translates to: GPGRRRCPRGRRPGW*QWPAAAPPAAPWAA
Trigger: GGCGGCCCAAGGGGCGGCTGGTGGCGCCGCTGCTGGCCACTGTCACCATCCTGGACGACGACCACGCGGGCATCTTCTCCTTCCAGGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 90 bp CCACCAGCCGCCCCTTGGGCCGCCCACCGCCGTCGGGCTCGAACATaGCCTGAGCATCGCCCACACGCAGGTTCAGCAGCCTCACGAAGA +
Preference number: 5 (lower is better)
Translates to: PPAAPWAAHRRRART*PEHRPHAGSAASRR
Trigger: TCTTCGTGAGGCTGCTGAACCTGCGTGTGGGCGATGCTCAGGGCATGTTCGAGCCCGACGGCGGTGGGCGGCCCAAGGGGCGGCTGGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS TCA 90 bp AGCCGCCCCTTGGGCCGCCCACCGCCGTCGGGCTCGAACATGCCCTaGGCATCGCCCACACGCAGGTTCAGCAGCCTCACGAAGAAGTGC +
Preference number: 5 (lower is better)
Translates to: SRPLGRPPPSGSNMP*ASPTRRFSSLTKKC
Trigger: GCACTTCTTCGTGAGGCTGCTGAACCTGCGTGTGGGCGATGCTCAGGGCATGTTCGAGCCCGACGGCGGTGGGCGGCCCAAGGGGCGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 90 bp CACCATCGGTGGCTCCCGGCCTGCGGGCAGCATCCGCAGCATGTCTaGGCAGCACATTGCCCGCACCTGTCATCAGCCGCGTGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: HHRWLPACGQHPQHV*AAHCPHLSSAAWPG
Trigger: TCCAGGCCACGCGGCTGATGACAGGTGCGGGCAATGTGCTGCGCAGACATGCTGCGGATGCTGCCCGCAGGCCGGGAGCCACCGATGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 90 bp CTCCCGGCCTGCGGGCAGCATCCGCAGCATGTCTGCGCAGCACATTaGCCGCACCTGTCATCAGCCGCGTGGCCTGGATGCGGTAGAAGG +
Preference number: 5 (lower is better)
Translates to: LPACGQHPQHVCAAH*PHLSSAAWPGCGRR
Trigger: CCTTCTACCGCATCCAGGCCACGCGGCTGATGACAGGTGCGGGCAATGTGCTGCGCAGACATGCTGCGGATGCTGCCCGCAGGCCGGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 90 bp TGCCCAATGCGCCCAGCTCGCCAGGGACCTCAGTGCCCACGAATGTaGCGTCCAGCTCGATGCTCTTGGGTGGGTCTCCCTCTGCCCCGA +
Preference number: 5 (lower is better)
Translates to: CPMRPARQGPQCPRM*RPARCSWVGLPLPR
Trigger: TCGGGGCAGAGGGAGACCCACCCAAGAGCATCGAGCTGGACGGCACATTCGTGGGCACTGAGGTCCCTGGCGAGCTGGGCGCATTGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 90 bp CCTCACGCCGGCTGGCATCTAGTTCACGCGCCTCAGCAGGACCTGTaGCCAATGCGCCCAGCTCGCCAGGGACCTCAGTGCCCACGAATG +
Preference number: 5 (lower is better)
Translates to: PHAGWHLVHAPQQDL*PMRPARQGPQCPRM
Trigger: CATTCGTGGGCACTGAGGTCCCTGGCGAGCTGGGCGCATTGGGCACAGGTCCTGCTGAGGCGCGTGAACTAGATGCCAGCCGGCGTGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 90 bp CAGTGCCACGGGCGCCCGAGCTGCGAACCACGCGCACATCCACAGTaGCCATGCACTCGCTCACATGCAGCAGGCGGTCCTGGAAGGAGA +
Preference number: 5 (lower is better)
Translates to: QCHGRPSCEPRAHPQ*PCTRSHAAGGPGRR
Trigger: TCTCCTTCCAGGACCGCCTGCTGCATGTGAGCGAGTGCATGGGCACTGTGGATGTGCGCGTGGTTCGCAGCTCGGGCGCCCGTGGCACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 90 bp GCTCTCCACAAGCATCCTCGTAATGTACACCACCGCCACGGGCCGTaGCGTCCACTGTGCGGTAGGGGAGGCGTACAGTGCCACGGGCGC +
Preference number: 5 (lower is better)
Translates to: ALHKHPRNVHHRHGP*RPLCGRGGVQCHGR
Trigger: GCGCCCGTGGCACTGTACGCCTCCCCTACCGCACAGTGGACGGCACGGCCCGTGGCGGTGGTGTACATTACGAGGATGCTTGTGGAGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS CCA 90 bp AGATGCGACTGGCACCATCGTCCTCATCATCGGGGGCACCATCGGTaGCTCCCGGCCTGCGGGCAGCATCCGCAGCATGTCTGCGCAGCA +
Preference number: 5 (lower is better)
Translates to: RCDWHHRPHHRGHHR*LPACGQHPQHVCAA
Trigger: TGCTGCGCAGACATGCTGCGGATGCTGCCCGCAGGCCGGGAGCCACCGATGGTGCCCCCGATGATGAGGACGATGGTGCCAGTCGCATCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS CCA 90 bp TCGCTCACATGCAGCAGGCGGTCCTGGAAGGAGAAGATGCCCGCGTaGTCGTCGTCCAGGATGGTGACAGTGGCCAGCAGCGGCGCCACC +
Preference number: 5 (lower is better)
Translates to: SLTCSRRSWKEKMPA*SSSRMVTVASSGAT
Trigger: GGTGGCGCCGCTGCTGGCCACTGTCACCATCCTGGACGACGACCACGCGGGCATCTTCTCCTTCCAGGACCGCCTGCTGCATGTGAGCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS CCA 90 bp GGCCCAGGAACACGTTCACCGCATTGGAGCCGGTCACGTTACCGATaGACGCGTCGGCACACTGGTCCTGCAGCGCGGCCACCTTGCTGG +
Preference number: 5 (lower is better)
Translates to: GPGTRSPHWSRSRYR*TRRHTGPAARPPCW
Trigger: CCAGCAAGGTGGCCGCGCTGCAGGACCAGTGTGCCGACGCGTCCATCGGTAACGTGACCGGCTCCAATGCGGTGAACGTGTTCCTGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 90 bp CAGCAGGACCTGTGCCCAATGCGCCCAGCTCGCCAGGGACCTCAGTaGCCACGAATGTGCCGTCCAGCTCGATGCTCTTGGGTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: QQDLCPMRPARQGPQ*PRMCRPARCSWVGL
Trigger: GAGACCCACCCAAGAGCATCGAGCTGGACGGCACATTCGTGGGCACTGAGGTCCCTGGCGAGCTGGGCGCATTGGGCACAGGTCCTGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 90 bp CACGGGCGCCCGAGCTGCGAACCACGCGCACATCCACAGTGCCCATaGACTCGCTCACATGCAGCAGGCGGTCCTGGAAGGAGAAGATGC +
Preference number: 5 (lower is better)
Translates to: HGRPSCEPRAHPQCP*TRSHAAGGPGRRRC
Trigger: GCATCTTCTCCTTCCAGGACCGCCTGCTGCATGTGAGCGAGTGCATGGGCACTGTGGATGTGCGCGTGGTTCGCAGCTCGGGCGCCCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 90 bp GCCCAGCTCGCCGCCAATCTGCGGCCGGCGCCGGTACAACAGCACTaGGATGCACACGAAGGCGAAGACGGTGAACAGCGTGACCGAGAA +
Preference number: 5 (lower is better)
Translates to: AQLAANLRPAPVQQH*DAHEGEDGEQRDRE
Trigger: TTCTCGGTCACGCTGTTCACCGTCTTCGCCTTCGTGTGCATCGCAGTGCTGTTGTACCGGCGCCGGCCGCAGATTGGCGGCGAGCTGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS CCA 90 bp ACCGCATTGGAGCCGGTCACGTTACCGATGGACGCGTCGGCACACTaGTCCTGCAGCGCGGCCACCTTGCTGGCGAACGTGTCAGGGATG +
Preference number: 5 (lower is better)
Translates to: TALEPVTLPMDASAH*SCSAATLLANVSGM
Trigger: CATCCCTGACACGTTCGCCAGCAAGGTGGCCGCGCTGCAGGACCAGTGTGCCGACGCGTCCATCGGTAACGTGACCGGCTCCAATGCGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS CCA 90 bp AGAAGAGAATGTAGAGGAACCAGAGGCCCAGGAAGAGAGCGGTGGTaGCCAGCTTGGGTCCCCGCGGGCCGCCCAGCTCGCCGCCAATCT +
Preference number: 5 (lower is better)
Translates to: RRECRGTRGPGRERW*PAWVPAGRPARRQS
Trigger: AGATTGGCGGCGAGCTGGGCGGCCCGCGGGGACCCAAGCTGGCCACCACCGCTCTCTTCCTGGGCCTCTGGTTCCTCTACATTCTCTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CAA 90 bp GGAAAGCAGAAGGCTGTGAGGGTGGCAGGGTCACCTAAGGTCGCAAGGAGTGGGTGCGTCTCCCCGGGCTaGAACACCAGCGTGCCCTCG +
Preference number: 5 (lower is better)
Translates to: GKQKAVRVAGSPKVARSGCVSPG*NTSVPS
Trigger: CGAGGGCACGCTGGTGTTCAAGCCCGGGGAGACGCA...CCCACTCCTTGCGACCTTAGGTGACCCTGCCACCCTCACAGCCTTCTGCTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 90 bp TTGCAGAACCGTCCTCGGTACGGTAGTCCACGTAGAAGGTGCTGTTaGCCTCACCGCCCTGGCAAGCCACGGACAGCAGCACTGACCCGC +
Preference number: 5 (lower is better)
Translates to: LQNRPRYGSPRRRCC*PHRPGKPRTAALTR
Trigger: GCGGGTCAGTGCTGCTGTCCGTGGCTTGCCAGGGCGGTGAGGGCAACAGCACCTTCTACGTGGACTACCGTACCGAGGACGGTTCTGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CAA 90 bp AGGCTCGGTGCCCAGAAAGACCGAGAAGTAGTGTCTGGCCAGGGGACTCGGGTTGCAGCGGTAGGAACCTaGGCAGCCTTCTGGGCTGGC +
Preference number: 5 (lower is better)
Translates to: RLGAQKDREVVSGQGTRVAAVGT*AAFWAG
Trigger: GCCAGCCCAGAAGGCTGCCAAGGTTCCTACCGCTGC...AACCCGAGTCCCCTGGCCAGACACTACTTCTCGGTCTTTCTGGGCACCGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CAA 90 bp ATGTGCCTCCTCTGGCTAAGCCTGGGGGACAGATACTCCAAACGTCCCTCCTCCTGCGTCTCCCCGGGCTaGAACACCAGCGTGCCCTCG +
Preference number: 5 (lower is better)
Translates to: MCLLWLSLGDRYSKRPSSCVSPG*NTSVPS
Trigger: CGAGGGCACGCTGGTGTTCAAGCCCGGGGAGACGCA...GGAGGAGGGACGTTTGGAGTATCTGTCCCCCAGGCTTAGCCAGAGGAGGCACAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 90 bp CACGAATGTGCCGTCCAGCTCGATGCTCTTGGGTGGGTCTCCCTCTaGCCCGATGATGATTCCACTGCGAGGGTCGGTGCGGTAGCGCTT +
Preference number: 5 (lower is better)
Translates to: HECAVQLDALGWVSL*PDDDSTARVGAVAL
Trigger: AAGCGCTACCGCACCGACCCTCGCAGTGGAATCATCATCGGGGCAGAGGGAGACCCACCCAAGAGCATCGAGCTGGACGGCACATTCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 90 bp CTGCCTTTGCAGAACCGTCCTCGGTACGGTAGTCCACGTAGAAGGTaGTGTTGCCCTCACCGCCCTGGCAAGCCACGGACAGCAGCACTG +
Preference number: 5 (lower is better)
Translates to: LPLQNRPRYGSPRRR*CCPHRPGKPRTAAL
Trigger: CAGTGCTGCTGTCCGTGGCTTGCCAGGGCGGTGAGGGCAACAGCACCTTCTACGTGGACTACCGTACCGAGGACGGTTCTGCAAAGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS CCA 90 bp GACCTCAGTGCCCACGAATGTGCCGTCCAGCTCGATGCTCTTGGGTaGGTCTCCCTCTGCCCCGATGATGATTCCACTGCGAGGGTCGGT +
Preference number: 5 (lower is better)
Translates to: DLSAHECAVQLDALG*VSLCPDDDSTARVG
Trigger: ACCGACCCTCGCAGTGGAATCATCATCGGGGCAGAGGGAGACCCACCCAAGAGCATCGAGCTGGACGGCACATTCGTGGGCACTGAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CAA 90 bp GGAAAGCAGAAGGCTGTGAGGGTGGCAGGGTCACCTAAGGTCGCAAGGAGTGGGTCCAGCTCGATGCTCTaGGGTGGGTCTCCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: GKQKAVRVAGSPKVARSGSSSML*GGSPSA
Trigger: GGCAGAGGGAGACCCACCCAAGAGCATCGAGCTGGA...CCCACTCCTTGCGACCTTAGGTGACCCTGCCACCCTCACAGCCTTCTGCTTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CAA 90 bp CACACAGGCTCCTCCCTCCAAGGCGTGGCTAGGCTCTCAGAGGTAGTGGAGGGTTGTCTGCGCAGCACATaGCCCGCACCTGTCATCAGC +
Preference number: 5 (lower is better)
Translates to: HTGSSLQGVARLSEVVEGCLRST*PAPVIS
Trigger: GCTGATGACAGGTGCGGGCAATGTGCTGCGCAGACA...ACCCTCCACTACCTCTGAGAGCCTAGCCACGCCTTGGAGGGAGGAGCCTGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS TCA 90 bp GGTGCTGTTGCCCTCACCGCCCTGGCAAGCCACGGACAGCAGCACTaGCCCGCAGTTTTCCAGGCAGTGATAGAGGCTGGGCTCAAAGAA +
Preference number: 5 (lower is better)
Translates to: GAVALTALASHGQQH*PAVFQAVIEAGLKE
Trigger: TTCTTTGAGCCCAGCCTCTATCACTGCCTGGAAAACTGCGGGTCAGTGCTGCTGTCCGTGGCTTGCCAGGGCGGTGAGGGCAACAGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 90 bp TCCTCGAAGATGTCGTCGTCGATGATCCCGATGCGCAGGTCCTTCTaGGTCTCCCCGGGCTTGAACACCAGCGTGCCCTCGCTGTACTCA +
Preference number: 5 (lower is better)
Translates to: SSKMSSSMIPMRRSF*VSPGLNTSVPSLYS
Trigger: TGAGTACAGCGAGGGCACGCTGGTGTTCAAGCCCGGGGAGACGCAGAAGGACCTGCGCATCGGGATCATCGACGACGACATCTTCGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CAA 90 bp GGAAAGCAGAAGGCTGTGAGGGTGGCAGGGTCACCTAAGGTCGCAAGGAGTGGGCAGCAGCACACCTGGTaGGCAGCGGTAGGAACCTTG +
Preference number: 5 (lower is better)
Translates to: GKQKAVRVAGSPKVARSGQQHTW*AAVGTL
Trigger: CAAGGTTCCTACCGCTGCCAACCAGGTGTGCTGCTG...CCCACTCCTTGCGACCTTAGGTGACCCTGCCACCCTCACAGCCTTCTGCTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CAA 90 bp AGGCTCGGTGCCCAGAAAGACCGAGAAGTAGTGTCTGGCCAGGGGACTCGGGTTTCACCGGCCTGGAAGTaGTGGCCACAGACCTCGATG +
Preference number: 5 (lower is better)
Translates to: RLGAQKDREVVSGQGTRVSPAWK*WPQTSM
Trigger: CATCGAGGTCTGTGGCCACAACTTCCAGGCCGGTGA...AACCCGAGTCCCCTGGCCAGACACTACTTCTCGGTCTTTCTGGGCACCGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CAA 90 bp CACACAGGCTCCTCCCTCCAAGGCGTGGCTAGGCTCTCAGAGGTAGTGGAGGGTAACACGTTCACCGCATaGGAGCCGGTCACGTTACCG +
Preference number: 5 (lower is better)
Translates to: HTGSSLQGVARLSEVVEGNTFTA*EPVTLP
Trigger: CGGTAACGTGACCGGCTCCAATGCGGTGAACGTGTT...ACCCTCCACTACCTCTGAGAGCCTAGCCACGCCTTGGAGGGAGGAGCCTGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CAA 90 bp AGTGATGCTGATGAGCAAGGGGTGAGAAGGGCCGTGGGTAATGGGTCTGATGCAGCAGCGGTAGGAACCTaGGCAGCCTTCTGGGCTGGC +
Preference number: 5 (lower is better)
Translates to: SDADEQGVRRAVGNGSDAAAVGT*AAFWAG
Trigger: GCCAGCCCAGAAGGCTGCCAAGGTTCCTACCGCTGC...TGCATCAGACCCATTACCCACGGCCCTTCTCACCCCTTGCTCATCAGCATCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CAA 90 bp ATGTGCCTCCTCTGGCTAAGCCTGGGGGACAGATACTCCAAACGTCCCTCCTCCCAGCAGCACACCTGGTaGGCAGCGGTAGGAACCTTG +
Preference number: 5 (lower is better)
Translates to: MCLLWLSLGDRYSKRPSSQQHTW*AAVGTL
Trigger: CAAGGTTCCTACCGCTGCCAACCAGGTGTGCTGCTG...GGAGGAGGGACGTTTGGAGTATCTGTCCCCCAGGCTTAGCCAGAGGAGGCACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CAA 90 bp GGCAGAGATGGATGGCGTCCTGGGATGGCACAGCCTCCCTCTGAGGTACCTAGGATGACCACAAACATGTaGAAGGCGGCACTGCCCACG +
Preference number: 5 (lower is better)
Translates to: GRDGWRPGMAQPPSEVPRMTTNM*KAALPT
Trigger: CGTGGGCAGTGCCGCCTTCAACATGTTTGTGGTCAT...CCTAGGTACCTCAGAGGGAGGCTGTGCCATCCCAGGACGCCATCCATCTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CAA 90 bp GGCAGAGATGGATGGCGTCCTGGGATGGCACAGCCTCCCTCTGAGGTACCTAGGAAGACCCTCAGGTGCTaGATCTTACGGCTCTCGCCA +
Preference number: 5 (lower is better)
Translates to: GRDGWRPGMAQPPSEVPRKTLRC*ILRLSP
Trigger: TGGCGAGAGCCGTAAGATCAAGCACCTGAGGGTCTT...CCTAGGTACCTCAGAGGGAGGCTGTGCCATCCCAGGACGCCATCCATCTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CAA 90 bp CTGTCAGGGGAGGTCAGGTGGGCTCCCTTTGAGTCTCAGTCTCATCCACTAAGCTCCAGCTCGATGCTCTaGGGTGGGTCTCCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: LSGEVRWAPFESQSHPLSSSSML*GGSPSA
Trigger: GGCAGAGGGAGACCCACCCAAGAGCATCGAGCTGGA...GCTTAGTGGATGAGACTGAGACTCAAAGGGAGCCCACCTGACCTCCCCTGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CAA 90 bp AGGCTCGGTGCCCAGAAAGACCGAGAAGTAGTGTCTGGCCAGGGGACTCGGGTTATGACCTCGAGGCGATaGTTCTCCCCAAGAACTGGC +
Preference number: 5 (lower is better)
Translates to: RLGAQKDREVVSGQGTRVMTSRR*FSPRTG
Trigger: GCCAGTTCTTGGGGAGAACAATCGCCTCGAGGTCAT...AACCCGAGTCCCCTGGCCAGACACTACTTCTCGGTCTTTCTGGGCACCGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CAA 90 bp GTCTGGGTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCCAACACGTTCACCGCATaGGAGCCGGTCACGTTACCG +
Preference number: 5 (lower is better)
Translates to: VWVERLVGPRANATKSPPNTFTA*EPVTLP
Trigger: CGGTAACGTGACCGGCTCCAATGCGGTGAACGTGTT...GGGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTACCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS TCA 90 bp CCGCCATCCAGGCAAACACCACACACACCGGGAAGAAGATCAGTGTaGGCAGTGCCTCCCACACCTGGACTACACCTGGGGAGAAAACTG +
Preference number: 5 (lower is better)
Translates to: PPSRQTPHTPGRRSV*AVPPTPGLHLGRKL
Trigger: CAGTTTTCTCCCCAGGTGTAGTCCAGGTGTGGGAGGCACTGCTCACACTGATCTTCTTCCCGGTGTGTGTGGTGTTTGCCTGGATGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS CCA 90 bp CGGACAGCAGCACTGACCCGCAGTTTTCCAGGCAGTGATAGAGGCTaGGCTCAAAGAAGATGCGACTGGCACCATCGTCCTCATCATCGG +
Preference number: 5 (lower is better)
Translates to: RTAALTRSFPGSDRG*AQRRCDWHHRPHHR
Trigger: CCGATGATGAGGACGATGGTGCCAGTCGCATCTTCTTTGAGCCCAGCCTCTATCACTGCCTGGAAAACTGCGGGTCAGTGCTGCTGTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CAA 90 bp GTCTGGGTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCCAAGACCCTCAGGTGCTaGATCTTACGGCTCTCGCCA +
Preference number: 5 (lower is better)
Translates to: VWVERLVGPRANATKSPPKTLRC*ILRLSP
Trigger: TGGCGAGAGCCGTAAGATCAAGCACCTGAGGGTCTT...GGGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTACCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CAA 90 bp AGTGATGCTGATGAGCAAGGGGTGAGAAGGGCCGTGGGTAATGGGTCTGATGCATGTCTGCGCAGCACATaGCCCGCACCTGTCATCAGC +
Preference number: 5 (lower is better)
Translates to: SDADEQGVRRAVGNGSDACLRST*PAPVIS
Trigger: GCTGATGACAGGTGCGGGCAATGTGCTGCGCAGACA...TGCATCAGACCCATTACCCACGGCCCTTCTCACCCCTTGCTCATCAGCATCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 90 bp GAACACCAGCGTGCCCTCGCTGTACTCATAATCGGAGCCTGCCTTTaGAGAACCGTCCTCGGTACGGTAGTCCACGTAGAAGGTGCTGTT +
Preference number: 5 (lower is better)
Translates to: EHQRALAVLIIGACL*RTVLGTVVHVEGAV
Trigger: AACAGCACCTTCTACGTGGACTACCGTACCGAGGACGGTTCTGCAAAGGCAGGCTCCGATTATGAGTACAGCGAGGGCACGCTGGTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 90 bp GACCTCGAGGCGATTGTTCTCCCCAAGAACTGGCTTGCCCATCTCTaGTATCCTCTGGGCCTCCTCCTGCTCTGCAGTTATCTTCTTGTC +
Preference number: 5 (lower is better)
Translates to: DLEAIVLPKNWLAHL*YPLGLLLLCSYLLV
Trigger: GACAAGAAGATAACTGCAGAGCAGGAGGAGGCCCAGAGGATAGCAGAGATGGGCAAGCCAGTTCTTGGGGAGAACAATCGCCTCGAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CAA 90 bp AGTGATGCTGATGAGCAAGGGGTGAGAAGGGCCGTGGGTAATGGGTCTGATGCAGCCATGAGTGTAAGGTaGGACACCGTCTCGTTCCAG +
Preference number: 5 (lower is better)
Translates to: SDADEQGVRRAVGNGSDAAMSVR*DTVSFQ
Trigger: CTGGAACGAGACGGTGTCCAACCTTACACTCATGGC...TGCATCAGACCCATTACCCACGGCCCTTCTCACCCCTTGCTCATCAGCATCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CAA 90 bp TGGTACCAGAAGCCTATGGCTTTTAGTTATGGTTGTGGCTGGTGGAGGCTCTGGTCACCGGCCTGGAAGTaGTGGCCACAGACCTCGATG +
Preference number: 5 (lower is better)
Translates to: WYQKPMAFSYGCGWWRLWSPAWK*WPQTSM
Trigger: CATCGAGGTCTGTGGCCACAACTTCCAGGCCGGTGA...CCAGAGCCTCCACCAGCCACAACCATAACTAAAAGCCATAGGCTTCTGGTACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
CDS-3UTR CAA 90 bp AGTCTGGGTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCGTCTCCCCATTTGCCTaGGTGATGGTGATCTCTTTC +
Preference number: 5 (lower is better)
Translates to: SLGRETGGSKSKCHQVPTVSPFA*VMVISF
Trigger: GAAAGAGATCACCATCACCAAGGCAAATGGGGAGAC...GGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTACCCAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CAA 90 bp AGTGATGCTGATGAGCAAGGGGTGAGAAGGGCCGTGGGTAATGGGTCTGATGCAGTCTCCCCATTTGCCTaGGTGATGGTGATCTCTTTC +
Preference number: 5 (lower is better)
Translates to: SDADEQGVRRAVGNGSDAVSPFA*VMVISF
Trigger: GAAAGAGATCACCATCACCAAGGCAAATGGGGAGAC...TGCATCAGACCCATTACCCACGGCCCTTCTCACCCCTTGCTCATCAGCATCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CAA 90 bp TGGTACCAGAAGCCTATGGCTTTTAGTTATGGTTGTGGCTGGTGGAGGCTCTGGATGACCTCGAGGCGATaGTTCTCCCCAAGAACTGGC +
Preference number: 5 (lower is better)
Translates to: WYQKPMAFSYGCGWWRLWMTSRR*FSPRTG
Trigger: GCCAGTTCTTGGGGAGAACAATCGCCTCGAGGTCAT...CCAGAGCCTCCACCAGCCACAACCATAACTAAAAGCCATAGGCTTCTGGTACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
CDS CCA 90 bp TTCCCTTGGTTGAGTAGCAGAGCTGAGATGCCTCGCTTAAGCCACTaGGGCTGGCCCAGCTCAATGAAGAAGTTGTCCTTCTTCTCATAC +
Preference number: 5 (lower is better)
Translates to: FPWLSSRAEMPRLSH*GWPSSMKKLSFFSY
Trigger: GTATGAGAAGAAGGACAACTTCTTCATTGAGCTGGGCCAGCCCCAGTGGCTTAAGCGAGGCATCTCAGCTCTGCTACTCAACCAAGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
CDS-3UTR CAA 90 bp TTGGTTGATGGGTGGGGCATGGTACTAGAAACCTATGGCTGCTTGGCAGGGGCGTCTGCAGTTATCTTCTaGTCTCCATTCCCTTGGTTG +
Preference number: 5 (lower is better)
Translates to: LVDGWGMVLETYGCLAGASAVIF*SPFPWL
Trigger: CAACCAAGGGAATGGAGACAAGAAGATAACTGCAGA...CGCCCCTGCCAAGCAGCCATAGGTTTCTAGTACCATGCCCCACCCATCAACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
CDS-3UTR CAA 90 bp AGTGATGCTGATGAGCAAGGGGTGAGAAGGGCCGTGGGTAATGGGTCTGATGCAGTGATCTCTTTCTCCTaGGATGTGATGACCTCAATG +
Preference number: 5 (lower is better)
Translates to: SDADEQGVRRAVGNGSDAVISFS*DVMTSM
Trigger: CATTGAGGTCATCACATCCAAGGAGAAAGAGATCAC...TGCATCAGACCCATTACCCACGGCCCTTCTCACCCCTTGCTCATCAGCATCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CAA 90 bp TCATCAACCTCAGCTCCCTCTGGCTCAGGCAAATTAGAGTCCTTCTCTTTTGCAATGACCACAAACATGTaGAAGGCGGCACTGCCCACG +
Preference number: 5 (lower is better)
Translates to: SSTSAPSGSGKLESFSFAMTTNM*KAALPT
Trigger: CGTGGGCAGTGCCGCCTTCAACATGTTTGTGGTCAT...TGCAAAAGAGAAGGACTCTAATTTGCCTGAGCCAGAGGGAGCTGAGGTTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
CDS-3UTR CAA 90 bp ATGTGCCTCCTCTGGCTAAGCCTGGGGGACAGATACTCCAAACGTCCCTCCTCCAGCTCAATGAAGAAGTaGTCCTTCTTCTCATACTCT +
Preference number: 5 (lower is better)
Translates to: MCLLWLSLGDRYSKRPSSSSMKK*SFFSYS
Trigger: AGAGTATGAGAAGAAGGACAACTTCTTCATTGAGCT...GGAGGAGGGACGTTTGGAGTATCTGTCCCCCAGGCTTAGCCAGAGGAGGCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CAA 90 bp GTCTGGGTAGAGAGACTGGTGGGTCCAAGAGCAAATGCCACCAAGTCCCCACCCAGCTCAATGAAGAAGTaGTCCTTCTTCTCATACTCT +
Preference number: 5 (lower is better)
Translates to: VWVERLVGPRANATKSPPSSMKK*SFFSYS
Trigger: AGAGTATGAGAAGAAGGACAACTTCTTCATTGAGCT...GGGTGGGGACTTGGTGGCATTTGCTCTTGGACCCACCAGTCTCTCTACCCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS CCA 90 bp GTTATCTTCTTGTCTCCATTCCCTGAGATGCCTCGCTTAAGCCACTaGGGCTGGCCCAGCTCAATGAAGAAGTTGTCCTTCTTCTCATAC +
Preference number: 5 (lower is better)
Translates to: VIFLSPFPEMPRLSH*GWPSSMKKLSFFSY
Trigger: GTATGAGAAGAAGGACAACTTCTTCATTGAGCTGGGCCAGCCCCAGTGGCTTAAGCGAGGCATCTCAGGGAATGGAGACAAGAAGATAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168693.3
CDS-3UTR CAA 90 bp GAAAATGCAGGTGGCCTACCAACAGATGTATGGCCTGCAAAGTTAAAAATGCCCGCCATGAGTGTAAGGTaGGACACCGTCTCGTTCCAG +
Preference number: 5 (lower is better)
Translates to: ENAGGLPTDVWPAKLKMPAMSVR*DTVSFQ
Trigger: CTGGAACGAGACGGTGTCCAACCTTACACTCATGGC...GGGCATTTTTAACTTTGCAGGCCATACATCTGTTGGTAGGCCACCTGCATTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS-3UTR CAA 90 bp GAAAATGCAGGTGGCCTACCAACAGATGTATGGCCTGCAAAGTTAAAAATGCCCTCTGCAGTTATCTTCTaGTCTCCATTCCCTGAGATG +
Preference number: 5 (lower is better)
Translates to: ENAGGLPTDVWPAKLKMPSAVIF*SPFPEM
Trigger: CATCTCAGGGAATGGAGACAAGAAGATAACTGCAGA...GGGCATTTTTAACTTTGCAGGCCATACATCTGTTGGTAGGCCACCTGCATTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000168693.3
CDS GCA 72 bp TTGGGTCCCCGCGGGCCGCCCAGCTCGCCGCCAATCTaGGGCCGGCGCCGGTACAACAGCACTGCGATGCAC +
Preference number: 6 (lower is better)
Translates to: LGPRGPPSSPPI*GRRRYNSTAMH
Trigger: GTGCATCGCAGTGCTGTTGTACCGGCGCCGGCCGCAGATTGGCGGCGAGCTGGGCGGCCCGCGGGGACCCAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 72 bp GCCCCTTGGGCCGCCCACCGCCGTCGGGCTCGAACATaGCCTGAGCATCGCCCACACGCAGGTTCAGCAGCC +
Preference number: 6 (lower is better)
Translates to: APWAAHRRRART*PEHRPHAGSAA
Trigger: GGCTGCTGAACCTGCGTGTGGGCGATGCTCAGGGCATGTTCGAGCCCGACGGCGGTGGGCGGCCCAAGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 72 bp GCCAGCGTGCCTGCACGCACCTCGAAGGGGCGACCCTaGACCGCCCAGTATACCGCTGCCACCGACCAGGCC +
Preference number: 6 (lower is better)
Translates to: ASVPARTSKGRP*TAQYTAATDQA
Trigger: GGCCTGGTCGGTGGCAGCGGTATACTGGGCGGTGCAGGGTCGCCCCTTCGAGGTGCGTGCAGGCACGCTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS CAA 72 bp AACCAGAGGCCCAGGAAGAGAGCGGTGGTGGCCAGCTaGGGTCCCCGCGGGCCGCCCAGCTCGCCGCCAATC +
Preference number: 6 (lower is better)
Translates to: NQRPRKRAVVAS*GPRGPPSSPPI
Trigger: GATTGGCGGCGAGCTGGGCGGCCCGCGGGGACCCAAGCTGGCCACCACCGCTCTCTTCCTGGGCCTCTGGTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 72 bp CCGTGCCGTCCACTGTGCGGTAGGGGAGGCGTACAGTaGCACGGGCGCCCGAGCTGCGAACCACGCGCACAT +
Preference number: 6 (lower is better)
Translates to: PCRPLCGRGGVQ*HGRPSCEPRAH
Trigger: ATGTGCGCGTGGTTCGCAGCTCGGGCGCCCGTGGCACTGTACGCCTCCCCTACCGCACAGTGGACGGCACGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 72 bp AATGTACACCACCGCCACGGGCCGTGCCGTCCACTGTaGGGTAGGGGAGGCGTACAGTGCCACGGGCGCCCG +
Preference number: 6 (lower is better)
Translates to: NVHHRHGPCRPL*GRGGVQCHGRP
Trigger: CGGGCGCCCGTGGCACTGTACGCCTCCCCTACCGCACAGTGGACGGCACGGCCCGTGGCGGTGGTGTACATT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS TCA 72 bp TTGGGCCGCCCACCGCCGTCGGGCTCGAACATGCCCTaGGCATCGCCCACACGCAGGTTCAGCAGCCTCACG +
Preference number: 6 (lower is better)
Translates to: LGRPPPSGSNMP*ASPTRRFSSLT
Trigger: CGTGAGGCTGCTGAACCTGCGTGTGGGCGATGCTCAGGGCATGTTCGAGCCCGACGGCGGTGGGCGGCCCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS TCA 72 bp AGGAGAAGATGCCCGCGTGGTCGTCGTCCAGGATGGTaGCAGTGGCCAGCAGCGGCGCCACCAGCCGCCCCT +
Preference number: 6 (lower is better)
Translates to: RRRCPRGRRPGW*QWPAAAPPAAP
Trigger: AGGGGCGGCTGGTGGCGCCGCTGCTGGCCACTGTCACCATCCTGGACGACGACCACGCGGGCATCTTCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 72 bp TGGCTCCCGGCCTGCGGGCAGCATCCGCAGCATGTCTaGGCAGCACATTGCCCGCACCTGTCATCAGCCGCG +
Preference number: 6 (lower is better)
Translates to: WLPACGQHPQHV*AAHCPHLSSAA
Trigger: CGCGGCTGATGACAGGTGCGGGCAATGTGCTGCGCAGACATGCTGCGGATGCTGCCCGCAGGCCGGGAGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 72 bp ACGCGTCGGCACACTGGTCCTGCAGCGCGGCCACCTTaGTGGCGAACGTGTCAGGGATGGAGGTGCCCAGGG +
Preference number: 6 (lower is better)
Translates to: TRRHTGPAARPP*WRTCQGWRCPG
Trigger: CCCTGGGCACCTCCATCCCTGACACGTTCGCCAGCAAGGTGGCCGCGCTGCAGGACCAGTGTGCCGACGCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 72 bp GGGCGCCCGAGCTGCGAACCACGCGCACATCCACAGTaGCCATGCACTCGCTCACATGCAGCAGGCGGTCCT +
Preference number: 6 (lower is better)
Translates to: GRPSCEPRAHPQ*PCTRSHAAGGP
Trigger: AGGACCGCCTGCTGCATGTGAGCGAGTGCATGGGCACTGTGGATGTGCGCGTGGTTCGCAGCTCGGGCGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS CCA 72 bp TGGCACCATCGTCCTCATCATCGGGGGCACCATCGGTaGCTCCCGGCCTGCGGGCAGCATCCGCAGCATGTC +
Preference number: 6 (lower is better)
Translates to: WHHRPHHRGHHR*LPACGQHPQHV
Trigger: GACATGCTGCGGATGCTGCCCGCAGGCCGGGAGCCACCGATGGTGCCCCCGATGATGAGGACGATGGTGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS CCA 72 bp CGTCGGCACACTGGTCCTGCAGCGCGGCCACCTTGCTaGCGAACGTGTCAGGGATGGAGGTGCCCAGGGCTA +
Preference number: 6 (lower is better)
Translates to: RRHTGPAARPPC*RTCQGWRCPGL
Trigger: TAGCCCTGGGCACCTCCATCCCTGACACGTTCGCCAGCAAGGTGGCCGCGCTGCAGGACCAGTGTGCCGACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS CCA 72 bp GAGCCGGTCACGTTACCGATGGACGCGTCGGCACACTaGTCCTGCAGCGCGGCCACCTTGCTGGCGAACGTG +
Preference number: 6 (lower is better)
Translates to: EPVTLPMDASAH*SCSAATLLANV
Trigger: CACGTTCGCCAGCAAGGTGGCCGCGCTGCAGGACCAGTGTGCCGACGCGTCCATCGGTAACGTGACCGGCTC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 72 bp CGCCCAGCTCGCCAGGGACCTCAGTGCCCACGAATGTaGCGTCCAGCTCGATGCTCTTGGGTGGGTCTCCCT +
Preference number: 6 (lower is better)
Translates to: RPARQGPQCPRM*RPARCSWVGLP
Trigger: AGGGAGACCCACCCAAGAGCATCGAGCTGGACGGCACATTCGTGGGCACTGAGGTCCCTGGCGAGCTGGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 72 bp GGCTGGCATCTAGTTCACGCGCCTCAGCAGGACCTGTaGCCAATGCGCCCAGCTCGCCAGGGACCTCAGTGC +
Preference number: 6 (lower is better)
Translates to: GWHLVHAPQQDL*PMRPARQGPQC
Trigger: GCACTGAGGTCCCTGGCGAGCTGGGCGCATTGGGCACAGGTCCTGCTGAGGCGCGTGAACTAGATGCCAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 72 bp TGCGGGCAGCATCCGCAGCATGTCTGCGCAGCACATTaGCCGCACCTGTCATCAGCCGCGTGGCCTGGATGC +
Preference number: 6 (lower is better)
Translates to: CGQHPQHVCAAH*PHLSSAAWPGC
Trigger: GCATCCAGGCCACGCGGCTGATGACAGGTGCGGGCAATGTGCTGCGCAGACATGCTGCGGATGCTGCCCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS CCA 72 bp GTACACCACGGCCCGTGCAACCTTGTCGCCCAGCGATaGGTCCTCGGGTTCCCACACAGGCAGCAGCACACC +
Preference number: 6 (lower is better)
Translates to: VHHGPCNLVAQR*VLGFPHRQQHT
Trigger: GGTGTGCTGCTGCCTGTGTGGGAACCCGAGGACCCATCGCTGGGCGACAAGGTTGCACGGGCCGTGGTGTAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS CAA 72 bp CTGCGGGCAGCATCCGCAGCATGTCTGCGCAGCACATaGCCCGCACCTGTCATCAGCCGCGTGGCCTGGATG +
Preference number: 6 (lower is better)
Translates to: LRAASAACLRST*PAPVISRVAWM
Trigger: CATCCAGGCCACGCGGCTGATGACAGGTGCGGGCAATGTGCTGCGCAGACATGCTGCGGATGCTGCCCGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS TCA 72 bp GCCCTCACCGCCCTGGCAAGCCACGGACAGCAGCACTaGCCCGCAGTTTTCCAGGCAGTGATAGAGGCTGGG +
Preference number: 6 (lower is better)
Translates to: ALTALASHGQQH*PAVFQAVIEAG
Trigger: CCCAGCCTCTATCACTGCCTGGAAAACTGCGGGTCAGTGCTGCTGTCCGTGGCTTGCCAGGGCGGTGAGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 72 bp GCCGTCCAGCTCGATGCTCTTGGGTGGGTCTCCCTCTaGCCCGATGATGATTCCACTGCGAGGGTCGGTGCG +
Preference number: 6 (lower is better)
Translates to: AVQLDALGWVSL*PDDDSTARVGA
Trigger: CGCACCGACCCTCGCAGTGGAATCATCATCGGGGCAGAGGGAGACCCACCCAAGAGCATCGAGCTGGACGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 72 bp CTGTGCCCAATGCGCCCAGCTCGCCAGGGACCTCAGTaGCCACGAATGTGCCGTCCAGCTCGATGCTCTTGG +
Preference number: 6 (lower is better)
Translates to: LCPMRPARQGPQ*PRMCRPARCSW
Trigger: CCAAGAGCATCGAGCTGGACGGCACATTCGTGGGCACTGAGGTCCCTGGCGAGCTGGGCGCATTGGGCACAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 72 bp CCGAGCTGCGAACCACGCGCACATCCACAGTGCCCATaGACTCGCTCACATGCAGCAGGCGGTCCTGGAAGG +
Preference number: 6 (lower is better)
Translates to: PSCEPRAHPQCP*TRSHAAGGPGR
Trigger: CCTTCCAGGACCGCCTGCTGCATGTGAGCGAGTGCATGGGCACTGTGGATGTGCGCGTGGTTCGCAGCTCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 72 bp GCCGCCAATCTGCGGCCGGCGCCGGTACAACAGCACTaGGATGCACACGAAGGCGAAGACGGTGAACAGCGT +
Preference number: 6 (lower is better)
Translates to: AANLRPAPVQQH*DAHEGEDGEQR
Trigger: ACGCTGTTCACCGTCTTCGCCTTCGTGTGCATCGCAGTGCTGTTGTACCGGCGCCGGCCGCAGATTGGCGGC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS CCA 72 bp ACACGTTCACCGCATTGGAGCCGGTCACGTTACCGATaGACGCGTCGGCACACTGGTCCTGCAGCGCGGCCA +
Preference number: 6 (lower is better)
Translates to: TRSPHWSRSRYR*TRRHTGPAARP
Trigger: TGGCCGCGCTGCAGGACCAGTGTGCCGACGCGTCCATCGGTAACGTGACCGGCTCCAATGCGGTGAACGTGT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS CCA 72 bp AGGCCACACCCAGGCCCAGGAACACGTTCACCGCATTaGAGCCGGTCACGTTACCGATGGACGCGTCGGCAC +
Preference number: 6 (lower is better)
Translates to: RPHPGPGTRSPH*SRSRYRWTRRH
Trigger: GTGCCGACGCGTCCATCGGTAACGTGACCGGCTCCAATGCGGTGAACGTGTTCCTGGGCCTGGGTGTGGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS CAA 90 bp CAGCGATGGGTCCTCGGGTTCCCACACAGGCAGCAGCACACCTGGTaGGCAGCGGTAGGAACCTTGGCAGCCTTCTGGGCTGGCATCGCT +
Preference number: 6 (lower is better)
Translates to: QRWVLGFPHRQQHTW*AAVGTLAAFWAGIA
Trigger: AGCGATGCCAGCCCAGAAGGCTGCCAAGGTTCCTACCGCTGCCAACCAGGTGTGCTGCTGCCTGTGTGGGAACCCGAGGACCCATCGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 72 bp CGTCCTCGGTACGGTAGTCCACGTAGAAGGTGCTGTTaGCCTCACCGCCCTGGCAAGCCACGGACAGCAGCA +
Preference number: 6 (lower is better)
Translates to: RPRYGSPRRRCC*PHRPGKPRTAA
Trigger: TGCTGCTGTCCGTGGCTTGCCAGGGCGGTGAGGGCAACAGCACCTTCTACGTGGACTACCGTACCGAGGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 72 bp ATGTCGTCGTCGATGATCCCGATGCGCAGGTCCTTCTaGGTCTCCCCGGGCTTGAACACCAGCGTGCCCTCG +
Preference number: 6 (lower is better)
Translates to: MSSSMIPMRRSF*VSPGLNTSVPS
Trigger: CGAGGGCACGCTGGTGTTCAAGCCCGGGGAGACGCAGAAGGACCTGCGCATCGGGATCATCGACGACGACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 72 bp AAGCATCCTCGTAATGTACACCACCGCCACGGGCCGTaGCGTCCACTGTGCGGTAGGGGAGGCGTACAGTGC +
Preference number: 6 (lower is better)
Translates to: KHPRNVHHRHGP*RPLCGRGGVQC
Trigger: GCACTGTACGCCTCCCCTACCGCACAGTGGACGGCACGGCCCGTGGCGGTGGTGTACATTACGAGGATGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS CAA 90 bp AACGTGTCAGGGATGGAGGTGCCCAGGGCTACGAAGACCACGGCGTaGACTGAGTCCTTGAGGCCCACGGTGCACCCAAAGTGTGAGGCC +
Preference number: 6 (lower is better)
Translates to: NVSGMEVPRATKTTA*TESLRPTVHPKCEA
Trigger: GGCCTCACACTTTGGGTGCACCGTGGGCCTCAAGGACTCAGTCAACGCCGTGGTCTTCGTAGCCCTGGGCACCTCCATCCCTGACACGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS TCA 72 bp TCCCGATGCGCAGGTCCTTCTGCGTCTCCCCGGGCTTaGACACCAGCGTGCCCTCGCTGTACTCATAATCGG +
Preference number: 6 (lower is better)
Translates to: SRCAGPSASPRA*TPACPRCTHNR
Trigger: CCGATTATGAGTACAGCGAGGGCACGCTGGTGTTCAAGCCCGGGGAGACGCAGAAGGACCTGCGCATCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 72 bp CAGAACCGTCCTCGGTACGGTAGTCCACGTAGAAGGTaGTGTTGCCCTCACCGCCCTGGCAAGCCACGGACA +
Preference number: 6 (lower is better)
Translates to: QNRPRYGSPRRR*CCPHRPGKPRT
Trigger: TGTCCGTGGCTTGCCAGGGCGGTGAGGGCAACAGCACCTTCTACGTGGACTACCGTACCGAGGACGGTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS CCA 72 bp ACCTGGTTGGCAGCGGTAGGAACCTTGGCAGCCTTCTaGGCTGGCATCGCTGTCATTAGCTGTGGGAGGCGG +
Preference number: 6 (lower is better)
Translates to: TWLAAVGTLAAF*AGIAVISCGRR
Trigger: CCGCCTCCCACAGCTAATGACAGCGATGCCAGCCCAGAAGGCTGCCAAGGTTCCTACCGCTGCCAACCAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS CAA 90 bp TTCCCACACAGGCAGCAGCACACCTGGTTGGCAGCGGTAGGAACCTaGGCAGCCTTCTGGGCTGGCATCGCTGTCATTAGCTGTGGGAGG +
Preference number: 6 (lower is better)
Translates to: FPHRQQHTWLAAVGT*AAFWAGIAVISCGR
Trigger: CCTCCCACAGCTAATGACAGCGATGCCAGCCCAGAAGGCTGCCAAGGTTCCTACCGCTGCCAACCAGGTGTGCTGCTGCCTGTGTGGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 72 bp CACCAGCGTGCCCTCGCTGTACTCATAATCGGAGCCTaGCTTTGCAGAACCGTCCTCGGTACGGTAGTCCAC +
Preference number: 6 (lower is better)
Translates to: HQRALAVLIIGA*LCRTVLGTVVH
Trigger: GTGGACTACCGTACCGAGGACGGTTCTGCAAAGGCAGGCTCCGATTATGAGTACAGCGAGGGCACGCTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS CAA 72 bp TCAGTGCCCACGAATGTGCCGTCCAGCTCGATGCTCTaGGGTGGGTCTCCCTCTGCCCCGATGATGATTCCA +
Preference number: 6 (lower is better)
Translates to: SVPTNVPSSSML*GGSPSAPMMIP
Trigger: TGGAATCATCATCGGGGCAGAGGGAGACCCACCCAAGAGCATCGAGCTGGACGGCACATTCGTGGGCACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS TCA 72 bp AGGCAAACACCACACACACCGGGAAGAAGATCAGTGTaGGCAGTGCCTCCCACACCTGGACTACACCTGGGG +
Preference number: 6 (lower is better)
Translates to: RQTPHTPGRRSV*AVPPTPGLHLG
Trigger: CCCCAGGTGTAGTCCAGGTGTGGGAGGCACTGCTCACACTGATCTTCTTCCCGGTGTGTGTGGTGTTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS CAA 72 bp ACGATGGTGCCTGGGCCTAGCTCACCGGCCTGGAAGTaGTGGCCACAGACCTCGATGACAGTCAACAGAATC +
Preference number: 6 (lower is better)
Translates to: TMVPGPSSPAWK*WPQTSMTVNRI
Trigger: GATTCTGTTGACTGTCATCGAGGTCTGTGGCCACAACTTCCAGGCCGGTGAGCTAGGCCCAGGCACCATCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS CAA 72 bp GCGTGCCCTCGCTGTACTCATAATCGGAGCCTGCCTTaGCAGAACCGTCCTCGGTACGGTAGTCCACGTAGA +
Preference number: 6 (lower is better)
Translates to: ACPRCTHNRSLP*QNRPRYGSPRR
Trigger: TCTACGTGGACTACCGTACCGAGGACGGTTCTGCAAAGGCAGGCTCCGATTATGAGTACAGCGAGGGCACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 72 bp CCAGATGCGCACCGTGCCCACGCTGGTCTCCCCATTTaGCTTGGTGATGGTGATCTCTTTCTCCTTGGATGT +
Preference number: 6 (lower is better)
Translates to: PDAHRAHAGLPI*LGDGDLFLLGC
Trigger: ACATCCAAGGAGAAAGAGATCACCATCACCAAGGCAAATGGGGAGACCAGCGTGGGCACGGTGCGCATCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 72 bp CACCACACACACCGGGAAGAAGATCAGTGTGAGCAGTaGCTCCCACACCTGGACTACACCTGGGGAGAAAAC +
Preference number: 6 (lower is better)
Translates to: HHTHREEDQCEQ*LPHLDYTWGEN
Trigger: GTTTTCTCCCCAGGTGTAGTCCAGGTGTGGGAGGCACTGCTCACACTGATCTTCTTCCCGGTGTGTGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 72 bp TCTTCTGCTGGTGCAGCAGTGCATAGTACTTGGCGATaGCCATCAGCTGCTCCAGGTCCTTATCCGGGTGCT +
Preference number: 6 (lower is better)
Translates to: SSAGAAVHSTWR*PSAAPGPYPGA
Trigger: AGCACCCGGATAAGGACCTGGAGCAGCTGATGGGCATCGCCAAGTACTATGCACTGCTGCACCAGCAGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 72 bp TTTCCAGGCAGTGATAGAGGCTGGGCTCAAAGAAGATaGGACTGGCACCATCGTCCTCATCATCGGGGGCAC +
Preference number: 6 (lower is better)
Translates to: FPGSDRGWAQRR*DWHHRPHHRGH
Trigger: GTGCCCCCGATGATGAGGACGATGGTGCCAGTCGCATCTTCTTTGAGCCCAGCCTCTATCACTGCCTGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 72 bp CGTGCCCTCGCTGTACTCATAATCGGAGCCTGCCTTTaGAGAACCGTCCTCGGTACGGTAGTCCACGTAGAA +
Preference number: 6 (lower is better)
Translates to: RALAVLIIGACL*RTVLGTVVHVE
Trigger: TTCTACGTGGACTACCGTACCGAGGACGGTTCTGCAAAGGCAGGCTCCGATTATGAGTACAGCGAGGGCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 72 bp GCGATGCCCATCAGCTGCTCCAGGTCCTTATCCGGGTaGTTCTGCTTCAAGTCCTTAAGGATCTGGATGACC +
Preference number: 6 (lower is better)
Translates to: AMPISCSRSLSG*FCFKSLRIWMT
Trigger: GGTCATCCAGATCCTTAAGGACTTGAAGCAGAAGCACCCGGATAAGGACCTGGAGCAGCTGATGGGCATCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS GCA 72 bp GCGATTGTTCTCCCCAAGAACTGGCTTGCCCATCTCTaGTATCCTCTGGGCCTCCTCCTGCTCTGCAGTTAT +
Preference number: 6 (lower is better)
Translates to: AIVLPKNWLAHL*YPLGLLLLCSY
Trigger: ATAACTGCAGAGCAGGAGGAGGCCCAGAGGATAGCAGAGATGGGCAAGCCAGTTCTTGGGGAGAACAATCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS CAA 72 bp ATGCGCACCGTGCCCACGCTGGTCTCCCCATTTGCCTaGGTGATGGTGATCTCTTTCTCCTTGGATGTGATG +
Preference number: 6 (lower is better)
Translates to: MRTVPTLVSPFA*VMVISFSLDVM
Trigger: CATCACATCCAAGGAGAAAGAGATCACCATCACCAAGGCAAATGGGGAGACCAGCGTGGGCACGGTGCGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS CCA 72 bp TTATCCGGGTGCTTCTGCTTCAAGTCCTTAAGGATCTaGATGACCTCACGCCGGCTGGCATCTAGTTCACGC +
Preference number: 6 (lower is better)
Translates to: LSGCFCFKSLRI*MTSRRLASSSR
Trigger: GCGTGAACTAGATGCCAGCCGGCGTGAGGTCATCCAGATCCTTAAGGACTTGAAGCAGAAGCACCCGGATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS CCA 72 bp CCATTCCCTGAGATGCCTCGCTTAAGCCACTGGGGCTaGCCCAGCTCAATGAAGAAGTTGTCCTTCTTCTCA +
Preference number: 6 (lower is better)
Translates to: PFPEMPRLSHWG*PSSMKKLSFFS
Trigger: TGAGAAGAAGGACAACTTCTTCATTGAGCTGGGCCAGCCCCAGTGGCTTAAGCGAGGCATCTCAGGGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168693.3
CDS CCA 72 bp TTGTCTCCATTCCCTGAGATGCCTCGCTTAAGCCACTaGGGCTGGCCCAGCTCAATGAAGAAGTTGTCCTTC +
Preference number: 6 (lower is better)
Translates to: LSPFPEMPRLSH*GWPSSMKKLSF
Trigger: GAAGGACAACTTCTTCATTGAGCTGGGCCAGCCCCAGTGGCTTAAGCGAGGCATCTCAGGGAATGGAGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168693.3
CDS CCA 72 bp TTGAGTAGCAGAGCTGAGATGCCTCGCTTAAGCCACTaGGGCTGGCCCAGCTCAATGAAGAAGTTGTCCTTC +
Preference number: 6 (lower is better)
Translates to: LSSRAEMPRLSH*GWPSSMKKLSF
Trigger: GAAGGACAACTTCTTCATTGAGCTGGGCCAGCCCCAGTGGCTTAAGCGAGGCATCTCAGCTCTGCTACTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
CDS CCA 72 bp GGGAAGAAGATCAGTGTGAGCAGTGCCTCCCACACCTaGACTACACCTGGGGAGAAAACTGCTAGAATGAGA +
Preference number: 6 (lower is better)
Translates to: GKKISVSSASHT*TTPGEKTARMR
Trigger: TCTCATTCTAGCAGTTTTCTCCCCAGGTGTAGTCCAGGTGTGGGAGGCACTGCTCACACTGATCTTCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2
CDS CAA 72 bp TGCTCTGCAGTTATCTTCTTGTCTCCATTCCCTTGGTaGAGTAGCAGAGCTGAGATGCCTCGCTTAAGCCAC +
Preference number: 6 (lower is better)
Translates to: CSAVIFLSPFPW*SSRAEMPRLSH
Trigger: GTGGCTTAAGCGAGGCATCTCAGCTCTGCTACTCAACCAAGGGAATGGAGACAAGAAGATAACTGCAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211649.2
CDS TCA 72 bp TGTCCTTCTTCTCATACTCTTCATCATCCACTATCTTaGCCTGAAGAGTTTTCATGGTCTCATCATCGCCGA +
Preference number: 6 (lower is better)
Translates to: CPSSHTLHHPLS*PEEFSWSHHRR
Trigger: TCGGCGATGATGAGACCATGAAAACTCTTCAGGTCAAGATAGTGGATGATGAAGAGTATGAGAAGAAGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168693.3
ENSMUST00000211649.2