RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC8A1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000054640

Ensembl transcript IDs: ENSMUST00000086538.10, ENSMUST00000163123.3, ENSMUST00000163680.9, ENSMUST00000234131.2, ENSMUST00000234923.2, ENSMUST00000235015.2

Found 520 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGAGGGCAGGAGGAGGTCTGGGATGGAAAACCCGGGGAACAGGCTaGGCTGGAAGGAGTAAGGGTCTTGCTAATCACAGTTCAGAGCTA +
Preference number: 1 (lower is better)
Translates to: WRAGGGLGWKTRGTG*AGRSKGLANHSSEL
Trigger: TAGCTCTGAACTGTGATTAGCAAGACCCTTACTCCTTCCAGCCCAGCCTGTTCCCCGGGTTTTCCATCCCAGACCTCCTCCTGCCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 90 bp GGTCAGGTGTGTTTAACAGGAGTAGGACAAGAGGGAAGGTATCGATaGGAAGGCACCCCCAGCCGGAGCAAATGGACAAGCAGCGCCCAA +
Preference number: 1 (lower is better)
Translates to: GQVCLTGVGQEGRYR*EGTPSRSKWTSSAQ
Trigger: TTGGGCGCTGCTTGTCCATTTGCTCCGGCTGGGGGTGCCTTCCCATCGATACCTTCCCTCTTGTCCTACTCCTGTTAAACACACCTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 90 bp ACCGGAGCAAATAGCACAGTGCATGGACTGTGGACCGAGGAGAGATaGACAGCAAGCTTACATTGGCAGTTTCCCCCATGGACGCTTCCA +
Preference number: 1 (lower is better)
Translates to: TGANSTVHGLWTEER*TASLHWQFPPWTLP
Trigger: TGGAAGCGTCCATGGGGGAAACTGCCAATGTAAGCTTGCTGTCCATCTCTCCTCGGTCCACAGTCCATGCACTGTGCTATTTGCTCCGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR GCA 90 bp TACGTGGAGTTGCGGGTGATGAGGAGGAGTGAGATAAATGGGCTGTaGTTGGGCTGGAGCTGCAAGTGGTCAGGTGTGTTTAACAGGAGT +
Preference number: 1 (lower is better)
Translates to: YVELRVMRRSEINGL*LGWSCKWSGVFNRS
Trigger: ACTCCTGTTAAACACACCTGACCACTTGCAGCTCCAGCCCAAGCACAGCCCATTTATCTCACTCCTCCTCATCACCCGCAACTCCACGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 90 bp CAACTCTCACTCTCTGAGGAGGAATCCCACTCACTACATTCCCCTTaGGAGCAGGAATTTGGGCTGTCTTGGTCACTGTTCTGCTCCCAG +
Preference number: 1 (lower is better)
Translates to: QLSLSEEESHSLHSP*EQEFGLSWSLFCSQ
Trigger: CTGGGAGCAGAACAGTGACCAAGACAGCCCAAATTCCTGCTCCCAAGGGGAATGTAGTGAGTGGGATTCCTCCTCAGAGAGTGAGAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR TCA 90 bp TATCTGGAGTCAACGCAGAGGGCCAGAAAGGCTCAGAGAAGTGTCTaGGAGATGGGCCAAGCCGTCCCATTTCCCATCAGTAGAATCACA +
Preference number: 1 (lower is better)
Translates to: YLESTQRARKAQRSV*EMGQAVPFPISRIT
Trigger: TGTGATTCTACTGATGGGAAATGGGACGGCTTGGCCCATCTCTCAGACACTTCTCTGAGCCTTTCTGGCCCTCTGCGTTGACTCCAGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR GCA 90 bp ATGACGAGGAACAACTGCTTGGCCACATGCAGCTTCTTCAGCTCATaGCTACAAGCAGAAGGAAATAAGAAGCCCCATCATGGGGGCTCG +
Preference number: 1 (lower is better)
Translates to: MTRNNCLATCSFFSS*LQAEGNKKPHHGGS
Trigger: CGAGCCCCCATGATGGGGCTTCTTATTTCCTTCTGCTTGTAGGCATGAGCTGAAGAAGCTGCATGTGGCCAAGCAGTTGTTCCTCGTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 90 bp GATCCACAGGCTGAGTGTTGGGTGATGAGATATCAGCCGACAGATTaGGTGAGGACTCCCTCCCTCCTTTTCTCCCAACATGCCAAACTA +
Preference number: 1 (lower is better)
Translates to: DPQAECWVMRYQPTD*VRTPSLLFSQHAKL
Trigger: TAGTTTGGCATGTTGGGAGAAAAGGAGGGAGGGAGTCCTCACCCAATCTGTCGGCTGATATCTCATCACCCAACACTCAGCCTGTGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR TCA 90 bp TGCCTCCATGCCTTGTTCAACTTGATGATGCCCGGGAATGGGAGATaGTGGTTTCTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTG +
Preference number: 1 (lower is better)
Translates to: CLHALFNLMMPGNGR*WFLTSGLVRMFLKL
Trigger: CAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAGAAACCATCATCTCCCATTCCCGGGCATCATCAAGTTGAACAAGGCATGGAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR GCA 90 bp GAGTATAGCTCTTCTAGGACGAGCTGCAAGATGACCCTGCCTCCATaGCTTGTTCAACTTGATGATGCCCGGGAATGGGAGATGATGGTT +
Preference number: 1 (lower is better)
Translates to: EYSSSRTSCKMTLPP*LVQLDDAREWEMMV
Trigger: AACCATCATCTCCCATTCCCGGGCATCATCAAGTTGAACAAGGCATGGAGGCAGGGTCATCTTGCAGCTCGTCCTAGAAGAGCTATACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 90 bp ATGACCCTGCCTCCATGCCTTGTTCAACTTGATGATGCCCGGGAATaGGAGATGATGGTTTCTGACTTCCGGCCTAGTACGGATGTTCTT +
Preference number: 1 (lower is better)
Translates to: MTLPPCLVQLDDARE*EMMVSDFRPSTDVL
Trigger: AAGAACATCCGTACTAGGCCGGAAGTCAGAAACCATCATCTCCCATTCCCGGGCATCATCAAGTTGAACAAGGCATGGAGGCAGGGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 90 bp GGCTGTGGCAGGGAGTTGAGGAGGAATGACATGAATTTATGTGGATaGGATGTTGCCTGCATGGGAAGAAGGCTGAGCTTGCTCAGGAAA +
Preference number: 1 (lower is better)
Translates to: GCGRELRRNDMNLCG*DVACMGRRLSLLRK
Trigger: TTTCCTGAGCAAGCTCAGCCTTCTTCCCATGCAGGCAACATCCCATCCACATAAATTCATGTCATTCCTCCTCAACTCCCTGCCACAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR GCA 90 bp CCGCTTTATCTGTTGCGACATGCCAGTGATGTTTGCTTCCCCTTTTaGCTCTCACAAATTTGGCTCTGTGGCTCAGGACTAACAGAGCTG +
Preference number: 1 (lower is better)
Translates to: PLYLLRHASDVCFPF*LSQIWLCGSGLTEL
Trigger: CAGCTCTGTTAGTCCTGAGCCACAGAGCCAAATTTGTGAGAGGCAAAAGGGGAAGCAAACATCACTGGCATGTCGCAACAGATAAAGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR GCA 90 bp CTATGTCTAGAACCATTGCTTTTCCTGGCTCCTTTTCAGCTCCCATaGTTCTCTCTGGAGGCAGTTCACCACTGTTCACATTCCGGAGAT +
Preference number: 1 (lower is better)
Translates to: LCLEPLLFLAPFQLP*FSLEAVHHCSHSGD
Trigger: ATCTCCGGAATGTGAACAGTGGTGAACTGCCTCCAGAGAGAAGCATGGGAGCTGAAAAGGAGCCAGGAAAAGCAATGGTTCTAGACATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR GCA 90 bp ATTCTGTCTCTCTTGGGAGTTCTACGCCTCAGTGCTTTGCCCTTCTaGAGGAAGGACATTCTCTGCTTTGGGAGATTGTTACCCATGGTT +
Preference number: 1 (lower is better)
Translates to: ILSLLGVLRLSALPF*RKDILCFGRLLPMV
Trigger: AACCATGGGTAACAATCTCCCAAAGCAGAGAATGTCCTTCCTGCAGAAGGGCAAAGCACTGAGGCGTAGAACTCCCAAGAGAGACAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR GCA 90 bp TCCTCTCTGATGACAACTAGACATTCAAATGGAGAGAGCACTGTGTaGTCAAAGAGAGAAGCTGTGGTCCCCTTCTCTAGGTGCTGTCAG +
Preference number: 1 (lower is better)
Translates to: SSLMTTRHSNGESTV*SKREAVVPFSRCCQ
Trigger: CTGACAGCACCTAGAGAAGGGGACCACAGCTTCTCTCTTTGAGCACACAGTGCTCTCTCCATTTGAATGTCTAGTTGTCATCAGAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR GCA 90 bp AACCATTTAAGAACTCGGAGAGAGTATAGCTCTTCTAGGACGAGCTaGAAGATGACCCTGCCTCCATGCCTTGTTCAACTTGATGATGCC +
Preference number: 1 (lower is better)
Translates to: NHLRTRREYSSSRTS*KMTLPPCLVQLDDA
Trigger: GGCATCATCAAGTTGAACAAGGCATGGAGGCAGGGTCATCTTGCAGCTCGTCCTAGAAGAGCTATACTCTCTCCGAGTTCTTAAATGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR GCA 90 bp AAAGTGAAAGCACATTCTGTCTCTCTTGGGAGTTCTACGCCTCAGTaGTTTGCCCTTCTGCAGGAAGGACATTCTCTGCTTTGGGAGATT +
Preference number: 1 (lower is better)
Translates to: KVKAHSVSLGSSTPQ*FALLQEGHSLLWEI
Trigger: AATCTCCCAAAGCAGAGAATGTCCTTCCTGCAGAAGGGCAAAGCACTGAGGCGTAGAACTCCCAAGAGAGACAGAATGTGCTTTCACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR GCA 90 bp TTAGACACACGAGCAGTCTCCAGGCTGAGCTGGAGGACTGAGGACTaGTTATATCACCTGTACTATGATCGTGTCCAATTTTGTCTGTCT +
Preference number: 1 (lower is better)
Translates to: LDTRAVSRLSWRTED*LYHLYYDRVQFCLS
Trigger: AGACAGACAAAATTGGACACGATCATAGTACAGGTGATATAAGCAGTCCTCAGTCCTCCAGCTCAGCCTGGAGACTGCTCGTGTGTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 90 bp GAAGGAGGGAAAGGAGTTCTCAGCTACATTTATCTCTTAAGTATCTaGAGTCAACGCAGAGGGCCAGAAAGGCTCAGAGAAGTGTCTGAG +
Preference number: 1 (lower is better)
Translates to: EGGKGVLSYIYLLSI*SQRRGPERLREVSE
Trigger: CTCAGACACTTCTCTGAGCCTTTCTGGCCCTCTGCGTTGACTCCAGATACTTAAGAGATAAATGTAGCTGAGAACTCCTTTCCCTCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR TCA 90 bp TTCTCTTCCAAGATCAAAACTGTCTCAGTGTCAACTCTCACTCTCTaGGGAGGAATCCCACTCACTACATTCCCCTTGGGAGCAGGAATT +
Preference number: 1 (lower is better)
Translates to: FSSKIKTVSVSTLTL*GGIPLTTFPLGAGI
Trigger: AATTCCTGCTCCCAAGGGGAATGTAGTGAGTGGGATTCCTCCTCAGAGAGTGAGAGTTGACACTGAGACAGTTTTGATCTTGGAAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR GCA 90 bp GGCCTATGGGAAACTTTAAGATGCTCAGATGAACCAAGAGTGATTTaGATGTACCCAGTGTCCAGATTCTACCAGAGCAAGAGGGCATTC +
Preference number: 1 (lower is better)
Translates to: GLWETLRCSDEPRVI*MYPVSRFYQSKRAF
Trigger: GAATGCCCTCTTGCTCTGGTAGAATCTGGACACTGGGTACATGCAAATCACTCTTGGTTCATCTGAGCATCTTAAAGTTTCCCATAGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR GCA 90 bp CTTCAAGGGAGTCCAAGAAAAAGTTCTGTAAATTACAAGCTCACTTaGAAGGAGTCCCAGCAGAGAGGGCTATGCAACCATCAACCATCC +
Preference number: 1 (lower is better)
Translates to: LQGSPRKSSVNYKLT*KESQQRGLCNHQPS
Trigger: GGATGGTTGATGGTTGCATAGCCCTCTCTGCTGGGACTCCTTGCAAGTGAGCTTGTAATTTACAGAACTTTTTCTTGGACTCCCTTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 90 bp ACTACATCCCTCCTTCTGAGAGCACTGAGAAGTATCATAGGCAACTaGCTGGCCAGGCTAGTTTGCTTGTTAGTAGGATTTTGGAGAAGA +
Preference number: 1 (lower is better)
Translates to: TTSLLLRALRSIIGN*LARLVCLLVGFWRR
Trigger: TCTTCTCCAAAATCCTACTAACAAGCAAACTAGCCTGGCCAGCCAGTTGCCTATGATACTTCTCAGTGCTCTCAGAAGGAGGGATGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR TCA 90 bp TCCCACTGGTCACTCAGACTTCCACTCAGGAGTTGCTATCTGAACTaGAAGGTGAACAAAACAGGGCTCAAAACAGCCTTCTCCATTAAT +
Preference number: 1 (lower is better)
Translates to: SHWSLRLPLRSCYLN*KVNKTGLKTAFSIN
Trigger: ATTAATGGAGAAGGCTGTTTTGAGCCCTGTTTTGTTCACCTTTCAGTTCAGATAGCAACTCCTGAGTGGAAGTCTGAGTGACCAGTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR TCA 90 bp GATGCTGTGATGAAAGGGCCTATGGGAAACTTTAAGATGCTCAGATaGACCAAGAGTGATTTGCATGTACCCAGTGTCCAGATTCTACCA +
Preference number: 1 (lower is better)
Translates to: DAVMKGPMGNFKMLR*TKSDLHVPSVQILP
Trigger: TGGTAGAATCTGGACACTGGGTACATGCAAATCACTCTTGGTTCATCTGAGCATCTTAAAGTTTCCCATAGGCCCTTTCATCACAGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR GCA 90 bp AGAGCACTGAGAAGTATCATAGGCAACTGGCTGGCCAGGCTAGTTTaGTTGTTAGTAGGATTTTGGAGAAGAAATGTCAGAGACAAGACA +
Preference number: 1 (lower is better)
Translates to: RALRSIIGNWLARLV*LLVGFWRRNVRDKT
Trigger: TGTCTTGTCTCTGACATTTCTTCTCCAAAATCCTACTAACAAGCAAACTAGCCTGGCCAGCCAGTTGCCTATGATACTTCTCAGTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR TCA 90 bp ACCTCTTTGTCTTTGAAGCTCCCTCGTGATAGATCCCTTACACTCTaGGCACAACTCCTGTACAAGTTCTGTTCTTTACTTTTTAGCCCT +
Preference number: 1 (lower is better)
Translates to: TSLSLKLPRDRSLTL*AQLLYKFCSLLFSP
Trigger: AGGGCTAAAAAGTAAAGAACAGAACTTGTACAGGAGTTGTGCTCAGAGTGTAAGGGATCTATCACGAGGGAGCTTCAAAGACAAAGAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 90 bp TTTATTGGTGGTACAGCAGCTGCAGGGAATCTGAATTCTGAGAGCTaGATTTTACATAACAGCAGGAACTTATTCTTCTGTGGGCTCACA +
Preference number: 1 (lower is better)
Translates to: FIGGTAAAGNLNSES*ILHNSRNLFFCGLT
Trigger: TGTGAGCCCACAGAAGAATAAGTTCCTGCTGTTATGTAAAATCCAGCTCTCAGAATTCAGATTCCCTGCAGCTGCTGTACCACCAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 90 bp ACCAGAGCAAGAGGGCATTCCTCCCCACAATTCTTATTCTATGTCTaGTGTCACCTCTTTCTGTGTACTTTTGATTGCATGAGATATGAA +
Preference number: 1 (lower is better)
Translates to: TRARGHSSPQFLFYV*CHLFLCTFDCMRYE
Trigger: TTCATATCTCATGCAATCAAAAGTACACAGAAAGAGGTGACACCAGACATAGAATAAGAATTGTGGGGAGGAATGCCCTCTTGCTCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR TCA 90 bp ATGACAAGGTTGGGCCACAGGGAAAGGAAAGGACACACTAAGAAGTaGTGGTCTTTCCTCAGAGTGAGTATATCAAAAATAGTGATTTAC +
Preference number: 1 (lower is better)
Translates to: MTRLGHRERKGHTKK*WSFLRVSISKIVIY
Trigger: GTAAATCACTATTTTTGATATACTCACTCTGAGGAAAGACCATCACTTCTTAGTGTGTCCTTTCCTTTCCCTGTGGCCCAACCTTGTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR TCA 90 bp GCAACAAGTTTCTATTCACTCAGTCACTACATGTTGGTTAAACAATaGATGGTTATGATCACTGAGTGGAAGGAGGGAAAGGAGTTCTCA +
Preference number: 1 (lower is better)
Translates to: ATSFYSLSHYMLVKQ*MVMITEWKEGKEFS
Trigger: TGAGAACTCCTTTCCCTCCTTCCACTCAGTGATCATAACCATTCATTGTTTAACCAACATGTAGTGACTGAGTGAATAGAAACTTGTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR TCA 90 bp ACTTCAATAATGATGAGGCAATTTTATGCCTCTCTGGCTTATTTCTaGTCCTTTGTCAATCCTGCGATGTTGGTTAGTGGAAGCTCTGAA +
Preference number: 1 (lower is better)
Translates to: TSIMMRQFYASLAYF*SFVNPAMLVSGSSE
Trigger: TTCAGAGCTTCCACTAACCAACATCGCAGGATTGACAAAGGATCAGAAATAAGCCAGAGAGGCATAAAATTGCCTCATCATTATTGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 90 bp CATGACACTAATTCCTCAACCAATAGTCACATGCTTAGAATGTCTTaGCCAACAGACATGATTATTGTAAGGACTGTTGGATGCTACTTG +
Preference number: 1 (lower is better)
Translates to: HDTNSSTNSHMLRMS*PTDMIIVRTVGCYL
Trigger: CAAGTAGCATCCAACAGTCCTTACAATAATCATGTCTGTTGGCCAAGACATTCTAAGCATGTGACTATTGGTTGAGGAATTAGTGTCATG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR GCA 90 bp AATTGTGGATTTGTTTCTAACCTTTCTAACCTTTCTCATCTTGTCTaGCTCATGGAACGAGCTGTGTTTTGTGCATATATACAACAGCCA +
Preference number: 1 (lower is better)
Translates to: NCGFVSNLSNLSHLV*LMERAVFCAYIQQP
Trigger: TGGCTGTTGTATATATGCACAAAACACAGCTCGTTCCATGAGGCAGACAAGATGAGAAAGGTTAGAAAGGTTAGAAACAAATCCACAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 90 bp ATCTTAATGATTCTAATATTCATCCAAAATCCACTCCCCTTTGGGTaGATCACTACTTTCTATAAGGAGAAGATCTTGGCCCTCCAAACA +
Preference number: 1 (lower is better)
Translates to: ILMILIFIQNPLPFG*ITTFYKEKILALQT
Trigger: TGTTTGGAGGGCCAAGATCTTCTCCTTATAGAAAGTAGTGATCCACCCAAAGGGGAGTGGATTTTGGATGAATATTAGAATCATTAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 90 bp GTGCAATTTCAGATCAGTAATGAAGCATTTTGGCCAAGGCCATTCTaGTATTTGCTCCAGGTACGATTTAAGAAGTATTTTTGTGACATC +
Preference number: 1 (lower is better)
Translates to: VQFQISNEAFWPRPF*YLLQVRFKKYFCDI
Trigger: GATGTCACAAAAATACTTCTTAAATCGTACCTGGAGCAAATACCAGAATGGCCTTGGCCAAAATGCTTCATTACTGATCTGAAATTGCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 90 bp TGTTCTGTGTTTTATGTGCAATTTCAGATCAGTAATGAAGCATTTTaGCCAAGGCCATTCTGGTATTTGCTCCAGGTACGATTTAAGAAG +
Preference number: 1 (lower is better)
Translates to: CSVFYVQFQISNEAF*PRPFWYLLQVRFKK
Trigger: CTTCTTAAATCGTACCTGGAGCAAATACCAGAATGGCCTTGGCCAAAATGCTTCATTACTGATCTGAAATTGCACATAAAACACAGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 90 bp GATTTGTTTCTAACCTTTCTAACCTTTCTCATCTTGTCTGCCTCATaGAACGAGCTGTGTTTTGTGCATATATACAACAGCCATCTTTCT +
Preference number: 1 (lower is better)
Translates to: DLFLTFLTFLILSAS*NELCFVHIYNSHLS
Trigger: AGAAAGATGGCTGTTGTATATATGCACAAAACACAGCTCGTTCCATGAGGCAGACAAGATGAGAAAGGTTAGAAAGGTTAGAAACAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR TCA 90 bp ATTCCTCCAGCAAAGCCTTTCCATGTGGGATGGGAAGATCAATATTaGATTTTCTCCTTAGAAACTCATAAAGTAGGAAGAACTAGATTC +
Preference number: 1 (lower is better)
Translates to: IPPAKPFHVGWEDQY*IFSLETHKVGRTRF
Trigger: GAATCTAGTTCTTCCTACTTTATGAGTTTCTAAGGAGAAAATTCAATATTGATCTTCCCATCCCACATGGAAAGGCTTTGCTGGAGGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 90 bp TGTCCAGGGCTTTTTGTTATGCTACATAGTAAGGGTCGTTTATTATaGACCTGTTTATCTGCTCTTTGCAATTCAAATCCAGGCTTATTT +
Preference number: 1 (lower is better)
Translates to: CPGLFVMLHSKGRLL*TCLSALCNSNPGLF
Trigger: AAATAAGCCTGGATTTGAATTGCAAAGAGCAGATAAACAGGTCCATAATAAACGACCCTTACTATGTAGCATAACAAAAAGCCCTGGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 90 bp TTTTTGTCTTTATACTTAAGAGTCCTTAGAGAAACTAAGAGCTTCTaGCTCATGCCAAGAAAGTCAATAGGACTGATATTTCCCACAGGA +
Preference number: 1 (lower is better)
Translates to: FLSLYLRVLRETKSF*LMPRKSIGLIFPTG
Trigger: TCCTGTGGGAAATATCAGTCCTATTGACTTTCTTGGCATGAGCCAGAAGCTCTTAGTTTCTCTAAGGACTCTTAAGTATAAAGACAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR TCA 90 bp ACAATTAATTTTTGTTTATTGGTGGTACAGCAGCTGCAGGGAATCTaGATTCTGAGAGCTGGATTTTACATAACAGCAGGAACTTATTCT +
Preference number: 1 (lower is better)
Translates to: TINFCLLVVQQLQGI*ILRAGFYITAGTYS
Trigger: AGAATAAGTTCCTGCTGTTATGTAAAATCCAGCTCTCAGAATTCAGATTCCCTGCAGCTGCTGTACCACCAATAAACAAAAATTAATTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR GCA 90 bp ATTTTGTTTCTCCACAGAATCACAAACATAGTCCATGCACATGTTTaGATGTGTTTCACACTGAAAATAGCCATAGATTATGTTGGTTGG +
Preference number: 1 (lower is better)
Translates to: ILFLHRITNIVHAHV*MCFTLKIAIDYVGW
Trigger: CCAACCAACATAATCTATGGCTATTTTCAGTGTGAAACACATGCAAACATGTGCATGGACTATGTTTGTGATTCTGTGGAGAAACAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 90 bp CACTTGAGAATCAATCAGTCAAGAATTTTGCTGAGGTCTACTAAGTaGTCAAGGATCCTCACTATAATACTCAGTTTGGTTCTTATTCAA +
Preference number: 1 (lower is better)
Translates to: HLRINQSRILLRSTK*SRILTIILSLVLIQ
Trigger: TTGAATAAGAACCAAACTGAGTATTATAGTGAGGATCCTTGACCACTTAGTAGACCTCAGCAAAATTCTTGACTGATTGATTCTCAAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR TCA 90 bp GCGATAACACAAGGGTCTCTAATGTCTCTGCAATGTCAACATATTTaGTTTTTCTATGACAAGTTTGCTTCTACAAGAAAAATTCCCAAG +
Preference number: 1 (lower is better)
Translates to: AITQGSLMSLQCQHI*FFYDKFASTRKIPK
Trigger: CTTGGGAATTTTTCTTGTAGAAGCAAACTTGTCATAGAAAAATCAAATATGTTGACATTGCAGAGACATTAGAGACCCTTGTGTTATCGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CAA 90 bp AGTGCATGGACTGTGGACCGAGGAGAGATGGACAGCAAGCTTACATaGGCAGTTTCCCCCATGGACGCTTCCAAGGTGACATTTCAAAGG +
Preference number: 2 (lower is better)
Translates to: SAWTVDRGEMDSKLT*AVSPMDASKVTFQR
Trigger: CCTTTGAAATGTCACCTTGGAAGCGTCCATGGGGGAAACTGCCAATGTAAGCTTGCTGTCCATCTCTCCTCGGTCCACAGTCCATGCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CAA 90 bp GAATATTCACCACTCTGGCTTTGCCCCAGTGCCACCAAGAGAGCCTaGAAGGTTGATCCTAGGAGACCTAGAGTGACCACTATGCCACTT +
Preference number: 2 (lower is better)
Translates to: EYSPLWLCPSATKRA*KVDPRRPRVTTMPL
Trigger: AAGTGGCATAGTGGTCACTCTAGGTCTCCTAGGATCAACCTTCAAGGCTCTCTTGGTGGCACTGGGGCAAAGCCAGAGTGGTGAATATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR GCA 90 bp GAACAACTGCTTGGCCACATGCAGCTTCTTCAGCTCATGCCTACAAGCAGAAGGCCTTTTCAGCTCCCATaGTTCTCTCTGGAGGCAGTT +
Preference number: 2 (lower is better)
Translates to: EQLLGHMQLLQLMPTSRRPFQLP*FSLEAV
Trigger: AACTGCCTCCAGAGAGAAGCATGGGAGCTGAAAAGG...CCTTCTGCTTGTAGGCATGAGCTGAAGAAGCTGCATGTGGCCAAGCAGTTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR GCA 90 bp CTTCTGAGAGCACTGAGAAGTATCATAGGCAACTGGCTGGCCAGGCTAGTTTGCCCACCTATCCATCTCTaGAGGCTTGTTCTGAACAGT +
Preference number: 2 (lower is better)
Translates to: LLRALRSIIGNWLARLVCPPIHL*RLVLNS
Trigger: ACTGTTCAGAACAAGCCTGCAGAGATGGATAGGTGG...GCAAACTAGCCTGGCCAGCCAGTTGCCTATGATACTTCTCAGTGCTCTCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR CCA 90 bp CTTCTGAGAGCACTGAGAAGTATCATAGGCAACTGGCTGGCCAGGCTAGTTTGCTTGGGAGCAGGAATTTaGGCTGTCTTGGTCACTGTT +
Preference number: 2 (lower is better)
Translates to: LLRALRSIIGNWLARLVCLGAGI*AVLVTV
Trigger: AACAGTGACCAAGACAGCCCAAATTCCTGCTCCCAA...GCAAACTAGCCTGGCCAGCCAGTTGCCTATGATACTTCTCAGTGCTCTCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR CCA 90 bp AGAGTGAGCTTTCCCCTATTGCTGAGAGGCAATACCAGGCACATCACGAAGTCTGGGCTGACATGTGTATaGGTTTGGATTGTGGCTGTC +
Preference number: 2 (lower is better)
Translates to: RVSFPLLLRGNTRHITKSGLTCV*VWIVAV
Trigger: GACAGCCACAATCCAAACCCATACACATGTCAGCCC...AGACTTCGTGATGTGCCTGGTATTGCCTCTCAGCAATAGGGGAAAGCTCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR TCA 90 bp GAACAACTGCTTGGCCACATGCAGCTTCTTCAGCTCATGCCTACAAGCAGAAGGAATGGTTATGATCACTaGGTGGAAGGAGGGAAAGGA +
Preference number: 2 (lower is better)
Translates to: EQLLGHMQLLQLMPTSRRNGYDH*VEGGKG
Trigger: TCCTTTCCCTCCTTCCACTCAGTGATCATAACCATT...CCTTCTGCTTGTAGGCATGAGCTGAAGAAGCTGCATGTGGCCAAGCAGTTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR TCA 90 bp CTTCTGAGAGCACTGAGAAGTATCATAGGCAACTGGCTGGCCAGGCTAGTTTGCACAAGTAATAGCCTGTaGGTTCATGTGCTTGGGTTC +
Preference number: 2 (lower is better)
Translates to: LLRALRSIIGNWLARLVCTSNSL*VHVLGF
Trigger: GAACCCAAGCACATGAACTCACAGGCTATTACTTGT...GCAAACTAGCCTGGCCAGCCAGTTGCCTATGATACTTCTCAGTGCTCTCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR TCA 90 bp CTTCTGAGAGCACTGAGAAGTATCATAGGCAACTGGCTGGCCAGGCTAGTTTGCTCCTTAAATGCCCCTTaGGGCAATGAAATCAGAGAC +
Preference number: 2 (lower is better)
Translates to: LLRALRSIIGNWLARLVCSLNAP*GNEIRD
Trigger: GTCTCTGATTTCATTGCCTCAAGGGGCATTTAAGGA...GCAAACTAGCCTGGCCAGCCAGTTGCCTATGATACTTCTCAGTGCTCTCAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR TCA 90 bp CTGCCTCATGGAACGAGCTGTGTTTTGTGCATATATACAACAGCCATCTTTCTTAGCCGACAGATTGGGTaGGGACTCCCTCCCTCCTTT +
Preference number: 2 (lower is better)
Translates to: LPHGTSCVLCIYTTAIFLSRQIG*GLPPSF
Trigger: AAAGGAGGGAGGGAGTCCTCACCCAATCTGTCGGCT...AAGAAAGATGGCTGTTGTATATATGCACAAAACACAGCTCGTTCCATGAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR CCA 90 bp TGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGACAGCAAGACGTTCTTaGGAAGTTCTCTGTGAAATT +
Preference number: 2 (lower is better)
Translates to: CVPIVRNSTECACPPKAVTARRS*EVLCEI
Trigger: AATTTCACAGAGAACTTCCCAAGAACGTCTTGCTGT...CACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
3UTR-3UTR CCA 90 bp GAACAACTGCTTGGCCACATGCAGCTTCTTCAGCTCATGCCTACAAGCAGAAGGGTTATGATCACTGAGTaGAAGGAGGGAAAGGAGTTC +
Preference number: 2 (lower is better)
Translates to: EQLLGHMQLLQLMPTSRRVMITE*KEGKEF
Trigger: GAACTCCTTTCCCTCCTTCCACTCAGTGATCATAAC...CCTTCTGCTTGTAGGCATGAGCTGAAGAAGCTGCATGTGGCCAAGCAGTTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CAA 90 bp TGGACCTCTAAAGTCCCACTGGTCACTCAGACTTCCACTCAGGAGTaGCTATCTGAACTGAAAGGTGAACAAAACAGGGCTCAAAACAGC +
Preference number: 2 (lower is better)
Translates to: WTSKVPLVTQTSTQE*LSELKGEQNRAQNS
Trigger: GCTGTTTTGAGCCCTGTTTTGTTCACCTTTCAGTTCAGATAGCAACTCCTGAGTGGAAGTCTGAGTGACCAGTGGGACTTTAGAGGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR TCA 90 bp GTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCCTACAGCATGAAGACTaGAAAGGCAAACACACCAAA +
Preference number: 2 (lower is better)
Translates to: VSIMCTNCQEQHRVCLSPLQHED*KGKHTK
Trigger: TTTGGTGTGTTTGCCTTTTCAGTCTTCATGCTGTAG...GGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACAC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
3UTR-3UTR GCA 90 bp CTTCTGAGAGCACTGAGAAGTATCATAGGCAACTGGCTGGCCAGGCTAGTTTGCGAAAGAGTCATTCCTTaGAATGGTTACTCCCAGTCT +
Preference number: 2 (lower is better)
Translates to: LLRALRSIIGNWLARLVCERVIP*NGYSQS
Trigger: AGACTGGGAGTAACCATTGCAAGGAATGACTCTTTC...GCAAACTAGCCTGGCCAGCCAGTTGCCTATGATACTTCTCAGTGCTCTCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR GCA 90 bp GAACAACTGCTTGGCCACATGCAGCTTCTTCAGCTCATGCCTACAAGCAGAAGGAGAAGGTACACCCAATaGTTATCACAGCATCACACA +
Preference number: 2 (lower is better)
Translates to: EQLLGHMQLLQLMPTSRRRRYTQ*LSQHHT
Trigger: TGTGTGATGCTGTGATAAGCATTGGGTGTACCTTCT...CCTTCTGCTTGTAGGCATGAGCTGAAGAAGCTGCATGTGGCCAAGCAGTTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR TCA 90 bp AGAGTGAGCTTTCCCCTATTGCTGAGAGGCAATACCAGGCACATCACGAAGTCTCTACAGCATGAAGACTaGAAAGGCAAACACACCAAA +
Preference number: 2 (lower is better)
Translates to: RVSFPLLLRGNTRHITKSLQHED*KGKHTK
Trigger: TTTGGTGTGTTTGCCTTTTCAGTCTTCATGCTGTAG...AGACTTCGTGATGTGCCTGGTATTGCCTCTCAGCAATAGGGGAAAGCTCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR CCA 90 bp GAACAACTGCTTGGCCACATGCAGCTTCTTCAGCTCATGCCTACAAGCAGAAGGACAGCAAGACGTTCTTaGGAAGTTCTCTGTGAAATT +
Preference number: 2 (lower is better)
Translates to: EQLLGHMQLLQLMPTSRRTARRS*EVLCEI
Trigger: AATTTCACAGAGAACTTCCCAAGAACGTCTTGCTGT...CCTTCTGCTTGTAGGCATGAGCTGAAGAAGCTGCATGTGGCCAAGCAGTTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR CCA 90 bp GTTTTAGCTCAGAGACCAGCCAGTGCCTCCAAGTCCAGAACATTCAGTGTTAGTGGAGACTGGCTCTTTTaGGAATGTCTGACCTTAACT +
Preference number: 2 (lower is better)
Translates to: VLAQRPASASKSRTFSVSGDWLF*ECLTLT
Trigger: AGTTAAGGTCAGACATTCCCAAAAGAGCCAGTCTCC...ACTAACACTGAATGTTCTGGACTTGGAGGCACTGGCTGGTCTCTGAGCTAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CAA 90 bp TGCCTGGTTACAAATGACAGTAGAAACAACACGTTTCTATTTGCTTaGAGATCACTTCCTGCGAAGGGGTCCCTCATCAGTTGCAAGCCA +
Preference number: 2 (lower is better)
Translates to: CLVTNDSRNNTFLFA*RSLPAKGSLISCKP
Trigger: TGGCTTGCAACTGATGAGGGACCCCTTCGCAGGAAGTGATCTCAAAGCAAATAGAAACGTGTTGTTTCTACTGTCATTTGTAACCAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CAA 90 bp AAGAAAAATTCCCAAGCAATTCCTTACAGAGTGAGCTTTCCCCTATaGCTGAGAGGCAATACCAGGCACATCACGAAGTCTACTGGATGG +
Preference number: 2 (lower is better)
Translates to: KKNSQAIPYRVSFPL*LRGNTRHITKSTGW
Trigger: CCATCCAGTAGACTTCGTGATGTGCCTGGTATTGCCTCTCAGCAATAGGGGAAAGCTCACTCTGTAAGGAATTGCTTGGGAATTTTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CAA 90 bp TCTTCAAGGGAGTCCAAGAAAAAGTTCTGTAAATTACAAGCTCACTaGCAAGGAGTCCCAGCAGAGAGGGCTATGCAACCATCAACCATC +
Preference number: 2 (lower is better)
Translates to: SSRESKKKFCKLQAH*QGVPAERAMQPSTI
Trigger: GATGGTTGATGGTTGCATAGCCCTCTCTGCTGGGACTCCTTGCAAGTGAGCTTGTAATTTACAGAACTTTTTCTTGGACTCCCTTGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CAA 90 bp GAGAGCACTGAGAAGTATCATAGGCAACTGGCTGGCCAGGCTAGTTaGCTTGTTAGTAGGATTTTGGAGAAGAAATGTCAGAGACAAGAC +
Preference number: 2 (lower is better)
Translates to: ESTEKYHRQLAGQAS*LVSRILEKKCQRQD
Trigger: GTCTTGTCTCTGACATTTCTTCTCCAAAATCCTACTAACAAGCAAACTAGCCTGGCCAGCCAGTTGCCTATGATACTTCTCAGTGCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR TCA 90 bp CTGCCTCATGGAACGAGCTGTGTTTTGTGCATATATACAACAGCCATCTTTCTTTATCCCTGTACCTGTTaGACAAGAGTGCCAGACACC +
Preference number: 2 (lower is better)
Translates to: LPHGTSCVLCIYTTAIFLYPCTC*TRVPDT
Trigger: GGTGTCTGGCACTCTTGTTCAACAGGTACAGGGATA...AAGAAAGATGGCTGTTGTATATATGCACAAAACACAGCTCGTTCCATGAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR TCA 90 bp AGAGTGAGCTTTCCCCTATTGCTGAGAGGCAATACCAGGCACATCACGAAGTCTAAGGTGGAAAAATGGTaGAAAGAAGGTACACCCAAT +
Preference number: 2 (lower is better)
Translates to: RVSFPLLLRGNTRHITKSKVEKW*KEGTPN
Trigger: ATTGGGTGTACCTTCTTTTCACCATTTTTCCACCTT...AGACTTCGTGATGTGCCTGGTATTGCCTCTCAGCAATAGGGGAAAGCTCACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR CCA 90 bp CTGCCTCATGGAACGAGCTGTGTTTTGTGCATATATACAACAGCCATCTTTCTTAATCCCAAGGGCTTCTaGAAAAGGCTGAAGAGAGGG +
Preference number: 2 (lower is better)
Translates to: LPHGTSCVLCIYTTAIFLNPKGF*KRLKRG
Trigger: CCCTCTCTTCAGCCTTTTCCAGAAGCCCTTGGGATT...AAGAAAGATGGCTGTTGTATATATGCACAAAACACAGCTCGTTCCATGAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CAA 90 bp CATAGGCAACTGGCTGGCCAGGCTAGTTTGCTTGTTAGTAGGATTTaGGAGAAGAAATGTCAGAGACAAGACAATCAACACATAGGCAAG +
Preference number: 2 (lower is better)
Translates to: HRQLAGQASLLVSRI*EKKCQRQDNQHIGK
Trigger: CTTGCCTATGTGTTGATTGTCTTGTCTCTGACATTTCTTCTCCAAAATCCTACTAACAAGCAAACTAGCCTGGCCAGCCAGTTGCCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CAA 90 bp GCACTGAGAAGTATCATAGGCAACTGGCTGGCCAGGCTAGTTTGCTaGTTAGTAGGATTTTGGAGAAGAAATGTCAGAGACAAGACAATC +
Preference number: 2 (lower is better)
Translates to: ALRSIIGNWLARLVC*LVGFWRRNVRDKTI
Trigger: GATTGTCTTGTCTCTGACATTTCTTCTCCAAAATCCTACTAACAAGCAAACTAGCCTGGCCAGCCAGTTGCCTATGATACTTCTCAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CAA 90 bp CTGATTTATAGAGGGCTGGGGGTTTCTCAGAGGAGAGCAGATAATTaGCATATTTCACAGCTTTCCTACTCATTACTGATGCTGCTTGGC +
Preference number: 2 (lower is better)
Translates to: LIYRGLGVSQRRADN*HISQLSYSLLMLLG
Trigger: GCCAAGCAGCATCAGTAATGAGTAGGAAAGCTGTGAAATATGCAAATTATCTGCTCTCCTCTGAGAAACCCCCAGCCCTCTATAAATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR TCA 90 bp TCCACAAGAACACATATCCCCAGTATAATAAATGTGATTTTGCAGGTTTCTTCTCCCGGGAATGGGAGATaGTGGTTTCTGACTTCCGGC +
Preference number: 2 (lower is better)
Translates to: STRTHIPSIINVILQVSSPGNGR*WFLTSG
Trigger: GCCGGAAGTCAGAAACCATCATCTCCCATTCCCGGG...AGAAGAAACCTGCAAAATCACATTTATTATACTGGGGATATGTGTTCTTGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR CCA 90 bp CTGCCTCATGGAACGAGCTGTGTTTTGTGCATATATACAACAGCCATCTTTCTTCTTAGTCATACCCAGTaGACCTCTAAAGTCCCACTG +
Preference number: 2 (lower is better)
Translates to: LPHGTSCVLCIYTTAIFLLSHTQ*TSKVPL
Trigger: CAGTGGGACTTTAGAGGTCCACTGGGTATGACTAAG...AAGAAAGATGGCTGTTGTATATATGCACAAAACACAGCTCGTTCCATGAGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CAA 90 bp ATATTTGCCACCAGGAGCCACCAGAAGCATGTGACAATTGTGGATTaGTTTCTAACCTTTCTAACCTTTCTCATCTTGTCTGCCTCATGG +
Preference number: 2 (lower is better)
Translates to: IFATRSHQKHVTIVD*FLTFLTFLILSASW
Trigger: CCATGAGGCAGACAAGATGAGAAAGGTTAGAAAGGTTAGAAACAAATCCACAATTGTCACATGCTTCTGGTGGCTCCTGGTGGCAAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR TCA 90 bp TCACTGAGTGGAAGGAGGGAAAGGAGTTCTCAGCTACATTTATCTCTTAAGTATAGTGTTCGGAGGAGGTaGGGAGCGAATCTTAATGAT +
Preference number: 2 (lower is better)
Translates to: SLSGRRERSSQLHLSLKYSVRRR*GANLND
Trigger: ATCATTAAGATTCGCTCCTCACCTCCTCCGAACACT...ATACTTAAGAGATAAATGTAGCTGAGAACTCCTTTCCCTCCTTCCACTCAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR TCA 90 bp TCCCCACAATTCTTATTCTATGTCTGGTGTCACCTCTTTCTGTGTACTTTTGATTCCCTAACAGGCACATaGAGGAGGGGCAAATGTTCA +
Preference number: 2 (lower is better)
Translates to: SPQFLFYVWCHLFLCTFDSLTGT*RRGKCS
Trigger: TGAACATTTGCCCCTCCTTCATGTGCCTGTTAGGGA...ATCAAAAGTACACAGAAAGAGGTGACACCAGACATAGAATAAGAATTGTGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR TCA 90 bp GTTTTAGCTCAGAGACCAGCCAGTGCCTCCAAGTCCAGAACATTCAGTGTTAGTTTTGCTCCTATCACTTaGGAATCAATCAGTCAAGAA +
Preference number: 2 (lower is better)
Translates to: VLAQRPASASKSRTFSVSFAPIT*ESISQE
Trigger: TTCTTGACTGATTGATTCTCAAGTGATAGGAGCAAA...ACTAACACTGAATGTTCTGGACTTGGAGGCACTGGCTGGTCTCTGAGCTAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR GCA 90 bp CTGCCTCATGGAACGAGCTGTGTTTTGTGCATATATACAACAGCCATCTTTCTTAGGAAGGACATTCTCTaGTTTGGGAGATTGTTACCC +
Preference number: 2 (lower is better)
Translates to: LPHGTSCVLCIYTTAIFLRKDIL*FGRLLP
Trigger: GGGTAACAATCTCCCAAAGCAGAGAATGTCCTTCCT...AAGAAAGATGGCTGTTGTATATATGCACAAAACACAGCTCGTTCCATGAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR CCA 90 bp TCACTGAGTGGAAGGAGGGAAAGGAGTTCTCAGCTACATTTATCTCTTAAGTATATCCAAAGTATCCACTaGTCTCCCAGCCTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: SLSGRRERSSQLHLSLKYIQSIH*SPSLSS
Trigger: AGAAGAAAGGCTGGGAGACCAGTGGATACTTTGGAT...ATACTTAAGAGATAAATGTAGCTGAGAACTCCTTTCCCTCCTTCCACTCAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CAA 90 bp CAAGCCGTCCCATTTCCCATCAGTAGAATCACAGCTTTTGGAATGTaGGGTTTATCTCTGCTCTTTGGTATTTTGAATGGAAAGAGTCAT +
Preference number: 2 (lower is better)
Translates to: QAVPFPISRITAFGM*GLSLLFGILNGKSH
Trigger: ATGACTCTTTCCATTCAAAATACCAAAGAGCAGAGATAAACCCAACATTCCAAAAGCTGTGATTCTACTGATGGGAAATGGGACGGCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR GCA 90 bp TCCACAAGAACACATATCCCCAGTATAATAAATGTGATTTTGCAGGTTTCTTCTACTGGAACAGGATTGTaGAAGCCATGGATGCCACTG +
Preference number: 2 (lower is better)
Translates to: STRTHIPSIINVILQVSSTGTGL*KPWMPL
Trigger: CAGTGGCATCCATGGCTTGCACAATCCTGTTCCAGT...AGAAGAAACCTGCAAAATCACATTTATTATACTGGGGATATGTGTTCTTGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR CCA 90 bp AAGTATTTTTGTGACATCTTTTGGGATAGTCATTTCTCTATAACAAGGAGGCTCTCCCATGCTTCTCTCTaGAGGCAGTTCACCACTGTT +
Preference number: 2 (lower is better)
Translates to: KYFCDIFWDSHFSITRRLSHASL*RQFTTV
Trigger: AACAGTGGTGAACTGCCTCCAGAGAGAAGCATGGGA...GAGCCTCCTTGTTATAGAGAAATGACTATCCCAAAAGATGTCACAAAAATACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR TCA 90 bp CTGCCTCATGGAACGAGCTGTGTTTTGTGCATATATACAACAGCCATCTTTCTTCATGAATGTCTTCCTTaGTATGAGCATTGTACACAT +
Preference number: 2 (lower is better)
Translates to: LPHGTSCVLCIYTTAIFLHECLP*YEHCTH
Trigger: ATGTGTACAATGCTCATATCAAGGAAGACATTCATG...AAGAAAGATGGCTGTTGTATATATGCACAAAACACAGCTCGTTCCATGAGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CAA 90 bp GTGACAATTGTGGATTTGTTTCTAACCTTTCTAACCTTTCTCATCTaGTCTGCCTCATGGAACGAGCTGTGTTTTGTGCATATATACAAC +
Preference number: 2 (lower is better)
Translates to: VTIVDLFLTFLTFLI*SASWNELCFVHIYN
Trigger: GTTGTATATATGCACAAAACACAGCTCGTTCCATGAGGCAGACAAGATGAGAAAGGTTAGAAAGGTTAGAAACAAATCCACAATTGTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CAA 90 bp CTGAGGTCTACTAAGTGGTCAAGGATCCTCACTATAATACTCAGTTaGGTTCTTATTCAAGAAGCAAATTCAGCCTGCCAATTTTATATG +
Preference number: 2 (lower is better)
Translates to: LRSTKWSRILTIILS*VLIQEANSACQFYM
Trigger: CATATAAAATTGGCAGGCTGAATTTGCTTCTTGAATAAGAACCAAACTGAGTATTATAGTGAGGATCCTTGACCACTTAGTAGACCTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CAA 90 bp CATTTTGTTTCTCCACAGAATCACAAACATAGTCCATGCACATGTTaGCATGTGTTTCACACTGAAAATAGCCATAGATTATGTTGGTTG +
Preference number: 2 (lower is better)
Translates to: HFVSPQNHKHSPCTC*HVFHTENSHRLCWL
Trigger: CAACCAACATAATCTATGGCTATTTTCAGTGTGAAACACATGCAAACATGTGCATGGACTATGTTTGTGATTCTGTGGAGAAACAAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR TCA 90 bp TCCTTTCCCATGGATAAGGATATAGATTGCACAAGGATACCTTTTTGGTCTTTAAGCGTGCAAGATTCATaGACAATAAGCCATTTTCTT +
Preference number: 2 (lower is better)
Translates to: SFPMDKDIDCTRIPFWSLSVQDS*TISHFL
Trigger: AAGAAAATGGCTTATTGTTCATGAATCTTGCACGCT...TAAAGACCAAAAAGGTATCCTTGTGCAATCTATATCCTTATCCATGGGAAAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CAA 90 bp TCCCACTATGTTGAAATAGTTTTGTCATTTCTTAAGACATTCCAATaGGGATTCTTTCGAGCGAAAGGTTACATTCATGCCACAGAAATA +
Preference number: 2 (lower is better)
Translates to: SHYVEIVLSFLKTFQ*GFFRAKGYIHATEI
Trigger: TATTTCTGTGGCATGAATGTAACCTTTCGCTCGAAAGAATCCCAATTGGAATGTCTTAAGAAATGACAAAACTATTTCAACATAGTGGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 72 bp AGGGCTCCCCTGAGGAGTCCCCACTGTCACCACTGTTaGTGGCCTGTGGAGTGTTGTGATGGAAAGGTACCA +
Preference number: 3 (lower is better)
Translates to: RAPLRSPHCHHC*WPVECCDGKVP
Trigger: TGGTACCTTTCCATCACAACACTCCACAGGCCACCAACAGTGGTGACAGTGGGGACTCCTCAGGGGAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 72 bp GGAGGAGGTCTGGGATGGAAAACCCGGGGAACAGGCTaGGCTGGAAGGAGTAAGGGTCTTGCTAATCACAGT +
Preference number: 3 (lower is better)
Translates to: GGGLGWKTRGTG*AGRSKGLANHS
Trigger: ACTGTGATTAGCAAGACCCTTACTCCTTCCAGCCCAGCCTGTTCCCCGGGTTTTCCATCCCAGACCTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR TCA 72 bp CCAGCCGGAGCAAATGGACAAGCAGCGCCCAAGCTTTaGCCACCACCAACAGAAGCACACAGATTCTTGAAC +
Preference number: 3 (lower is better)
Translates to: PAGANGQAAPKL*PPPTEAHRFLN
Trigger: GTTCAAGAATCTGTGTGCTTCTGTTGGTGGTGGTCAAAGCTTGGGCGCTGCTTGTCCATTTGCTCCGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR GCA 72 bp TCTTCTAGGACGAGCTGCAAGATGACCCTGCCTCCATaGCTTGTTCAACTTGATGATGCCCGGGAATGGGAG +
Preference number: 3 (lower is better)
Translates to: SSRTSCKMTLPP*LVQLDDAREWE
Trigger: CTCCCATTCCCGGGCATCATCAAGTTGAACAAGGCATGGAGGCAGGGTCATCTTGCAGCTCGTCCTAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR GCA 72 bp TTGCGGGTGATGAGGAGGAGTGAGATAAATGGGCTGTaGTTGGGCTGGAGCTGCAAGTGGTCAGGTGTGTTT +
Preference number: 3 (lower is better)
Translates to: LRVMRRSEINGL*LGWSCKWSGVF
Trigger: AAACACACCTGACCACTTGCAGCTCCAGCCCAAGCACAGCCCATTTATCTCACTCCTCCTCATCACCCGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR TCA 72 bp GAATATGTACGTGGAGTTGCGGGTGATGAGGAGGAGTaGGATAAATGGGCTGTGCTTGGGCTGGAGCTGCAA +
Preference number: 3 (lower is better)
Translates to: EYVRGVAGDEEE*DKWAVLGLELQ
Trigger: TTGCAGCTCCAGCCCAAGCACAGCCCATTTATCTCACTCCTCCTCATCACCCGCAACTCCACGTACATATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 72 bp CCTCCATGCCTTGTTCAACTTGATGATGCCCGGGAATaGGAGATGATGGTTTCTGACTTCCGGCCTAGTACG +
Preference number: 3 (lower is better)
Translates to: PPCLVQLDDARE*EMMVSDFRPST
Trigger: CGTACTAGGCCGGAAGTCAGAAACCATCATCTCCCATTCCCGGGCATCATCAAGTTGAACAAGGCATGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 72 bp CGGATGGAAAATCCCAGGCAAGAGCAACATGGGACCTaGACACACGTGATGACTGAAATGGTAGGGCTTTGG +
Preference number: 3 (lower is better)
Translates to: RMENPRQEQHGT*THVMTEMVGLW
Trigger: CCAAAGCCCTACCATTTCAGTCATCACGTGTGTCCAGGTCCCATGTTGCTCTTGCCTGGGATTTTCCATCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 72 bp AGAGGGCCAGAAAGGCTCAGAGAAGTGTCTGAGAGATaGGCCAAGCCGTCCCATTTCCCATCAGTAGAATCA +
Preference number: 3 (lower is better)
Translates to: RGPERLREVSER*AKPSHFPSVES
Trigger: TGATTCTACTGATGGGAAATGGGACGGCTTGGCCCATCTCTCAGACACTTCTCTGAGCCTTTCTGGCCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 72 bp ATCCCACTCACTACATTCCCCTTGGGAGCAGGAATTTaGGCTGTCTTGGTCACTGTTCTGCTCCCAGGTTGT +
Preference number: 3 (lower is better)
Translates to: IPLTTFPLGAGI*AVLVTVLLPGC
Trigger: ACAACCTGGGAGCAGAACAGTGACCAAGACAGCCCAAATTCCTGCTCCCAAGGGGAATGTAGTGAGTGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 72 bp CTCTCTGAGGAGGAATCCCACTCACTACATTCCCCTTaGGAGCAGGAATTTGGGCTGTCTTGGTCACTGTTC +
Preference number: 3 (lower is better)
Translates to: LSEEESHSLHSP*EQEFGLSWSLF
Trigger: GAACAGTGACCAAGACAGCCCAAATTCCTGCTCCCAAGGGGAATGTAGTGAGTGGGATTCCTCCTCAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 72 bp GCTGAGTGTTGGGTGATGAGATATCAGCCGACAGATTaGGTGAGGACTCCCTCCCTCCTTTTCTCCCAACAT +
Preference number: 3 (lower is better)
Translates to: AECWVMRYQPTD*VRTPSLLFSQH
Trigger: ATGTTGGGAGAAAAGGAGGGAGGGAGTCCTCACCCAATCTGTCGGCTGATATCTCATCACCCAACACTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 72 bp GAGATAAATGGGCTGTGCTTGGGCTGGAGCTGCAAGTaGTCAGGTGTGTTTAACAGGAGTAGGACAAGAGGG +
Preference number: 3 (lower is better)
Translates to: EINGLCLGWSCK*SGVFNRSRTRG
Trigger: CCCTCTTGTCCTACTCCTGTTAAACACACCTGACCACTTGCAGCTCCAGCCCAAGCACAGCCCATTTATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 72 bp AATAGCACAGTGCATGGACTGTGGACCGAGGAGAGATaGACAGCAAGCTTACATTGGCAGTTTCCCCCATGG +
Preference number: 3 (lower is better)
Translates to: NSTVHGLWTEER*TASLHWQFPPW
Trigger: CCATGGGGGAAACTGCCAATGTAAGCTTGCTGTCCATCTCTCCTCGGTCCACAGTCCATGCACTGTGCTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR TCA 72 bp GCCTTGTTCAACTTGATGATGCCCGGGAATGGGAGATaGTGGTTTCTGACTTCCGGCCTAGTACGGATGTTC +
Preference number: 3 (lower is better)
Translates to: ALFNLMMPGNGR*WFLTSGLVRMF
Trigger: GAACATCCGTACTAGGCCGGAAGTCAGAAACCATCATCTCCCATTCCCGGGCATCATCAAGTTGAACAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR TCA 72 bp CCACTGTCACCACTGTTGGTGGCCTGTGGAGTGTTGTaGTGGAAAGGTACCATTGCCACAGAGACTAAACAC +
Preference number: 3 (lower is better)
Translates to: PLSPLLVACGVL*WKGTIATETKH
Trigger: GTGTTTAGTCTCTGTGGCAATGGTACCTTTCCATCACAACACTCCACAGGCCACCAACAGTGGTGACAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 72 bp TGCGGACTGGAAAGTGAAAGCACATTCTGTCTCTCTTaGGAGTTCTACGCCTCAGTGCTTTGCCCTTCTGCA +
Preference number: 3 (lower is better)
Translates to: CGLESESTFCLS*EFYASVLCPSA
Trigger: TGCAGAAGGGCAAAGCACTGAGGCGTAGAACTCCCAAGAGAGACAGAATGTGCTTTCACTTTCCAGTCCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR CAA 90 bp CTTCTGAGAGCACTGAGAAGTATCATAGGCAACTGGCTGGCCAGGCTAGTTTGCGACATGTGTATGGGTTaGGATTGTGGCTGTCTCCTT +
Preference number: 3 (lower is better)
Translates to: LLRALRSIIGNWLARLVCDMCMG*DCGCLL
Trigger: AAGGAGACAGCCACAATCCAAACCCATACACATGTC...GCAAACTAGCCTGGCCAGCCAGTTGCCTATGATACTTCTCAGTGCTCTCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR TCA 72 bp GGAGAGAGTATAGCTCTTCTAGGACGAGCTGCAAGATaGCCCTGCCTCCATGCCTTGTTCAACTTGATGATG +
Preference number: 3 (lower is better)
Translates to: GESIALLGRAAR*PCLHALFNLMM
Trigger: CATCATCAAGTTGAACAAGGCATGGAGGCAGGGTCATCTTGCAGCTCGTCCTAGAAGAGCTATACTCTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR GCA 72 bp AGAACTCGGAGAGAGTATAGCTCTTCTAGGACGAGCTaGAAGATGACCCTGCCTCCATGCCTTGTTCAACTT +
Preference number: 3 (lower is better)
Translates to: RTRREYSSSRTS*KMTLPPCLVQL
Trigger: AAGTTGAACAAGGCATGGAGGCAGGGTCATCTTGCAGCTCGTCCTAGAAGAGCTATACTCTCTCCGAGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR GCA 72 bp GAACCATTGCTTTTCCTGGCTCCTTTTCAGCTCCCATaGTTCTCTCTGGAGGCAGTTCACCACTGTTCACAT +
Preference number: 3 (lower is better)
Translates to: EPLLFLAPFQLP*FSLEAVHHCSH
Trigger: ATGTGAACAGTGGTGAACTGCCTCCAGAGAGAAGCATGGGAGCTGAAAAGGAGCCAGGAAAAGCAATGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR GCA 72 bp CGAGCAGTCTCCAGGCTGAGCTGGAGGACTGAGGACTaGTTATATCACCTGTACTATGATCGTGTCCAATTT +
Preference number: 3 (lower is better)
Translates to: RAVSRLSWRTED*LYHLYYDRVQF
Trigger: AAATTGGACACGATCATAGTACAGGTGATATAAGCAGTCCTCAGTCCTCCAGCTCAGCCTGGAGACTGCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 72 bp CTCTTAGTCATACCCAGTGGACCTCTAAAGTCCCACTaGTCACTCAGACTTCCACTCAGGAGTTGCTATCTG +
Preference number: 3 (lower is better)
Translates to: LLVIPSGPLKSH*SLRLPLRSCYL
Trigger: CAGATAGCAACTCCTGAGTGGAAGTCTGAGTGACCAGTGGGACTTTAGAGGTCCACTGGGTATGACTAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 72 bp ATCGTTAAAGGTTGTAATTTGCTTGGCTGGAAGAGGTaGGTTAGCTTAAGAGGTGGGTCAGGCTGGGGCTGT +
Preference number: 3 (lower is better)
Translates to: IVKGCNLLGWKR*VSLRGGSGWGC
Trigger: ACAGCCCCAGCCTGACCCACCTCTTAAGCTAACCCACCTCTTCCAGCCAAGCAAATTACAACCTTTAACGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 72 bp AGGGAGTTGAGGAGGAATGACATGAATTTATGTGGATaGGATGTTGCCTGCATGGGAAGAAGGCTGAGCTTG +
Preference number: 3 (lower is better)
Translates to: RELRRNDMNLCG*DVACMGRRLSL
Trigger: CAAGCTCAGCCTTCTTCCCATGCAGGCAACATCCCATCCACATAAATTCATGTCATTCCTCCTCAACTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR CAA 90 bp ACAGTGAGGAGAGGGGACATTCCACAGTACAGAACATGCTGTGCCACTGGTGATAATAATGTGTACCAATaGTCAGGAACAGCACCGAGT +
Preference number: 3 (lower is better)
Translates to: TVRRGDIPQYRTCCATGDNNVYQ*SGTAPS
Trigger: ACTCGGTGCTGTTCCTGACAATTGGTACACATTATT...ATCACCAGTGGCACAGCATGTTCTGTACTGTGGAATGTCCCCTCTCCTCACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
3UTR-3UTR CAA 90 bp AGAGTGAGCTTTCCCCTATTGCTGAGAGGCAATACCAGGCACATCACGAAGTCTAAAATCCACTCCCCTTaGGGTGGATCACTACTTTCT +
Preference number: 3 (lower is better)
Translates to: RVSFPLLLRGNTRHITKSKIHSP*GGSLLS
Trigger: AGAAAGTAGTGATCCACCCAAAGGGGAGTGGATTTT...AGACTTCGTGATGTGCCTGGTATTGCCTCTCAGCAATAGGGGAAAGCTCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR CAA 90 bp CTTCTGAGAGCACTGAGAAGTATCATAGGCAACTGGCTGGCCAGGCTAGTTTGCACAGCTTTTGGAATGTaGGGTTTATCTCTGCTCTTT +
Preference number: 3 (lower is better)
Translates to: LLRALRSIIGNWLARLVCTAFGM*GLSLLF
Trigger: AAAGAGCAGAGATAAACCCAACATTCCAAAAGCTGT...GCAAACTAGCCTGGCCAGCCAGTTGCCTATGATACTTCTCAGTGCTCTCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR CAA 90 bp CTTCTGAGAGCACTGAGAAGTATCATAGGCAACTGGCTGGCCAGGCTAGTTTGCAATCAGTCAAGAATTTaGCTGAGGTCTACTAAGTGG +
Preference number: 3 (lower is better)
Translates to: LLRALRSIIGNWLARLVCNQSRI*LRSTKW
Trigger: CCACTTAGTAGACCTCAGCAAAATTCTTGACTGATT...GCAAACTAGCCTGGCCAGCCAGTTGCCTATGATACTTCTCAGTGCTCTCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR CAA 90 bp GTTTTAGCTCAGAGACCAGCCAGTGCCTCCAAGTCCAGAACATTCAGTGTTAGTAAAAGAATGACAAGGTaGGGCCACAGGGAAAGGAAA +
Preference number: 3 (lower is better)
Translates to: VLAQRPASASKSRTFSVSKRMTR*GHRERK
Trigger: TTTCCTTTCCCTGTGGCCCAACCTTGTCATTCTTTT...ACTAACACTGAATGTTCTGGACTTGGAGGCACTGGCTGGTCTCTGAGCTAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR TCA 72 bp AAGATCAAAACTGTCTCAGTGTCAACTCTCACTCTCTaGGGAGGAATCCCACTCACTACATTCCCCTTGGGA +
Preference number: 3 (lower is better)
Translates to: KIKTVSVSTLTL*GGIPLTTFPLG
Trigger: TCCCAAGGGGAATGTAGTGAGTGGGATTCCTCCTCAGAGAGTGAGAGTTGACACTGAGACAGTTTTGATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR TCA 72 bp CTGACCTTAACTAGAACTCGTGAAAGATCCACAGGCTaGGTGTTGGGTGATGAGATATCAGCCGACAGATTG +
Preference number: 3 (lower is better)
Translates to: LTLTRTRERSTG*VLGDEISADRL
Trigger: CAATCTGTCGGCTGATATCTCATCACCCAACACTCAGCCTGTGGATCTTTCACGAGTTCTAGTTAAGGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR GCA 72 bp ATGACAACTAGACATTCAAATGGAGAGAGCACTGTGTaGTCAAAGAGAGAAGCTGTGGTCCCCTTCTCTAGG +
Preference number: 3 (lower is better)
Translates to: MTTRHSNGESTV*SKREAVVPFSR
Trigger: CCTAGAGAAGGGGACCACAGCTTCTCTCTTTGAGCACACAGTGCTCTCTCCATTTGAATGTCTAGTTGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR GCA 72 bp AACAACTGCTTGGCCACATGCAGCTTCTTCAGCTCATaGCTACAAGCAGAAGGAAATAAGAAGCCCCATCAT +
Preference number: 3 (lower is better)
Translates to: NNCLATCSFFSS*LQAEGNKKPHH
Trigger: ATGATGGGGCTTCTTATTTCCTTCTGCTTGTAGGCATGAGCTGAAGAAGCTGCATGTGGCCAAGCAGTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR GCA 72 bp AAGCCGCTTTATCTGTTGCGACATGCCAGTGATGTTTaGTTCCCCTTTTGCCTCTCACAAATTTGGCTCTGT +
Preference number: 3 (lower is better)
Translates to: KPLYLLRHASDV*FPFCLSQIWLC
Trigger: ACAGAGCCAAATTTGTGAGAGGCAAAAGGGGAAGCAAACATCACTGGCATGTCGCAACAGATAAAGCGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 72 bp TTGGTCACTGTTCTGCTCCCAGGTTGTAGTATTACCTaGCCTACTGAACGGGCAACAAGTTTCTATTCACTC +
Preference number: 3 (lower is better)
Translates to: LVTVLLPGCSIT*PTERATSFYSL
Trigger: GAGTGAATAGAAACTTGTTGCCCGTTCAGTAGGCCAGGTAATACTACAACCTGGGAGCAGAACAGTGACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 72 bp CTCCTTCTGAGAGCACTGAGAAGTATCATAGGCAACTaGCTGGCCAGGCTAGTTTGCTTGTTAGTAGGATTT +
Preference number: 3 (lower is better)
Translates to: LLLRALRSIIGN*LARLVCLLVGF
Trigger: AAATCCTACTAACAAGCAAACTAGCCTGGCCAGCCAGTTGCCTATGATACTTCTCAGTGCTCTCAGAAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR CAA 90 bp CTTCTGAGAGCACTGAGAAGTATCATAGGCAACTGGCTGGCCAGGCTAGTTTGCGGAAAATGGGCATCTTaGTTAAAGGTAATGACTTTC +
Preference number: 3 (lower is better)
Translates to: LLRALRSIIGNWLARLVCGKWAS*LKVMTF
Trigger: GAAAGTCATTACCTTTAACAAAGATGCCCATTTTCC...GCAAACTAGCCTGGCCAGCCAGTTGCCTATGATACTTCTCAGTGCTCTCAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR CAA 90 bp GAACAACTGCTTGGCCACATGCAGCTTCTTCAGCTCATGCCTACAAGCAGAAGGTATATATGCCCAGCTTaGATTTTCATGTCAAACCTG +
Preference number: 3 (lower is better)
Translates to: EQLLGHMQLLQLMPTSRRYICPA*IFMSNL
Trigger: CAGGTTTGACATGAAAATCAAAGCTGGGCATATATA...CCTTCTGCTTGTAGGCATGAGCTGAAGAAGCTGCATGTGGCCAAGCAGTTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR TCA 72 bp TCACTCAGACTTCCACTCAGGAGTTGCTATCTGAACTaGAAGGTGAACAAAACAGGGCTCAAAACAGCCTTC +
Preference number: 3 (lower is better)
Translates to: SLRLPLRSCYLN*KVNKTGLKTAF
Trigger: GAAGGCTGTTTTGAGCCCTGTTTTGTTCACCTTTCAGTTCAGATAGCAACTCCTGAGTGGAAGTCTGAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR GCA 72 bp AAACAACACGTTTCTATTTGCTTTGAGATCACTTCCTaGGAAGGGGTCCCTCATCAGTTGCAAGCCACCTAT +
Preference number: 3 (lower is better)
Translates to: KQHVSICFEITS*EGVPHQLQATY
Trigger: ATAGGTGGCTTGCAACTGATGAGGGACCCCTTCGCAGGAAGTGATCTCAAAGCAAATAGAAACGTGTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR GCA 72 bp CTGCTGCAAATATTACATCCCATCACTGCAATGGCCTaGTATGCTGATATGATCTCTCAGAAGGGCTCTGAT +
Preference number: 3 (lower is better)
Translates to: LLQILHPITAMA*YADMISQKGSD
Trigger: ATCAGAGCCCTTCTGAGAGATCATATCAGCATAGCAGGCCATTGCAGTGATGGGATGTAATATTTGCAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR GCA 72 bp CCGTTAGCAATCATGGCCATGCTGACTTTTGCTTCCTaGAAAACTCGGAAACACTGGAAAGTCTCTGATTGT +
Preference number: 3 (lower is better)
Translates to: PLAIMAMLTFAS*KTRKHWKVSDC
Trigger: ACAATCAGAGACTTTCCAGTGTTTCCGAGTTTTGCAGGAAGCAAAAGTCAGCATGGCCATGATTGCTAACGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR GCA 72 bp TCTAGTACCGTTAGCAATCATGGCCATGCTGACTTTTaGTTCCTGCAAAACTCGGAAACACTGGAAAGTCTC +
Preference number: 3 (lower is better)
Translates to: SSTVSNHGHADF*FLQNSETLESL
Trigger: GAGACTTTCCAGTGTTTCCGAGTTTTGCAGGAAGCAAAAGTCAGCATGGCCATGATTGCTAACGGTACTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR TCA 72 bp ATGAAAGGGCCTATGGGAAACTTTAAGATGCTCAGATaGACCAAGAGTGATTTGCATGTACCCAGTGTCCAG +
Preference number: 3 (lower is better)
Translates to: MKGPMGNFKMLR*TKSDLHVPSVQ
Trigger: CTGGACACTGGGTACATGCAAATCACTCTTGGTTCATCTGAGCATCTTAAAGTTTCCCATAGGCCCTTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 72 bp CTCATTCAGCAGGACTCAGGACTGCTGCAGAATTGTTaGCCATTAAGGATAACAGCCAGAGCTAATTATTCA +
Preference number: 3 (lower is better)
Translates to: LIQQDSGLLQNC*PLRITARANYS
Trigger: TGAATAATTAGCTCTGGCTGTTATCCTTAATGGCCAACAATTCTGCAGCAGTCCTGAGTCCTGCTGAATGAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR CAA 90 bp CTGCCTCATGGAACGAGCTGTGTTTTGTGCATATATACAACAGCCATCTTTCTTCAAAAGAGAAAGCCTTaGAGTCTCCTCTCTGATGAC +
Preference number: 3 (lower is better)
Translates to: LPHGTSCVLCIYTTAIFLQKRKP*SLLSDD
Trigger: GTCATCAGAGAGGAGACTCAAAGGCTTTCTCTTTTG...AAGAAAGATGGCTGTTGTATATATGCACAAAACACAGCTCGTTCCATGAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR GCA 72 bp AGAAGTATCATAGGCAACTGGCTGGCCAGGCTAGTTTaGTTGTTAGTAGGATTTTGGAGAAGAAATGTCAGA +
Preference number: 3 (lower is better)
Translates to: RSIIGNWLARLV*LLVGFWRRNVR
Trigger: TCTGACATTTCTTCTCCAAAATCCTACTAACAAGCAAACTAGCCTGGCCAGCCAGTTGCCTATGATACTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR GCA 72 bp AACAACACTATATATAGTTACCCATGTCACCCTAATTaGATTCCTCCAGCAAAGCCTTTCCATGTGGGATGG +
Preference number: 3 (lower is better)
Translates to: NNTIYSYPCHPN*IPPAKPFHVGW
Trigger: CCATCCCACATGGAAAGGCTTTGCTGGAGGAATGCAATTAGGGTGACATGGGTAACTATATATAGTGTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 72 bp AGAGGGCATTCCTCCCCACAATTCTTATTCTATGTCTaGTGTCACCTCTTTCTGTGTACTTTTGATTGCATG +
Preference number: 3 (lower is better)
Translates to: RGHSSPQFLFYV*CHLFLCTFDCM
Trigger: CATGCAATCAAAAGTACACAGAAAGAGGTGACACCAGACATAGAATAAGAATTGTGGGGAGGAATGCCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 72 bp GGTACAGCAGCTGCAGGGAATCTGAATTCTGAGAGCTaGATTTTACATAACAGCAGGAACTTATTCTTCTGT +
Preference number: 3 (lower is better)
Translates to: GTAAAGNLNSES*ILHNSRNLFFC
Trigger: ACAGAAGAATAAGTTCCTGCTGTTATGTAAAATCCAGCTCTCAGAATTCAGATTCCCTGCAGCTGCTGTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR TCA 72 bp ATGATGAGGCAATTTTATGCCTCTCTGGCTTATTTCTaGTCCTTTGTCAATCCTGCGATGTTGGTTAGTGGA +
Preference number: 3 (lower is better)
Translates to: MMRQFYASLAYF*SFVNPAMLVSG
Trigger: TCCACTAACCAACATCGCAGGATTGACAAAGGATCAGAAATAAGCCAGAGAGGCATAAAATTGCCTCATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR TCA 72 bp TATAGTTTAATGGCTAGTTCTTGCTCACTGCACAGATaGAATTGGCGTACACAGCCTGTTAACTTTCTGTGC +
Preference number: 3 (lower is better)
Translates to: YSLMASSCSLHR*NWRTQPVNFLC
Trigger: GCACAGAAAGTTAACAGGCTGTGTACGCCAATTTCATCTGTGCAGTGAGCAAGAACTAGCCATTAAACTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR TCA 72 bp TTTTGTTTATTGGTGGTACAGCAGCTGCAGGGAATCTaGATTCTGAGAGCTGGATTTTACATAACAGCAGGA +
Preference number: 3 (lower is better)
Translates to: FCLLVVQQLQGI*ILRAGFYITAG
Trigger: TCCTGCTGTTATGTAAAATCCAGCTCTCAGAATTCAGATTCCCTGCAGCTGCTGTACCACCAATAAACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR GCA 72 bp CTGAATGAGCGATCAGATTCGACACAAAGAAATCATTaGAGTGTCAAAATTAGATGCTTCTACTGCAGCTCC +
Preference number: 3 (lower is better)
Translates to: LNERSDSTQRNH*SVKIRCFYCSS
Trigger: GGAGCTGCAGTAGAAGCATCTAATTTTGACACTGCAATGATTTCTTTGTGTCGAATCTGATCGCTCATTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 72 bp CTAACCTTTCTAACCTTTCTCATCTTGTCTGCCTCATaGAACGAGCTGTGTTTTGTGCATATATACAACAGC +
Preference number: 3 (lower is better)
Translates to: LTFLTFLILSAS*NELCFVHIYNS
Trigger: GCTGTTGTATATATGCACAAAACACAGCTCGTTCCATGAGGCAGACAAGATGAGAAAGGTTAGAAAGGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 72 bp CAGATCGACAGTTCAATTCAAATAGTATTGATACACTaGTGCTACAGAGGGTGTCTTACACAGCAGTTCCAA +
Preference number: 3 (lower is better)
Translates to: QIDSSIQIVLIH*CYRGCLTQQFQ
Trigger: TTGGAACTGCTGTGTAAGACACCCTCTGTAGCACCAGTGTATCAATACTATTTGAATTGAACTGTCGATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR CAA 90 bp CTGCCTCATGGAACGAGCTGTGTTTTGTGCATATATACAACAGCCATCTTTCTTTATAAGGAGAAGATCTaGGCCCTCCAAACAAAACAA +
Preference number: 3 (lower is better)
Translates to: LPHGTSCVLCIYTTAIFLYKEKI*ALQTKQ
Trigger: TTGTTTTGTTTGGAGGGCCAAGATCTTCTCCTTATA...AAGAAAGATGGCTGTTGTATATATGCACAAAACACAGCTCGTTCCATGAGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR CAA 90 bp CTGCCTCATGGAACGAGCTGTGTTTTGTGCATATATACAACAGCCATCTTTCTTCTCTGCTTTGGGAGATaGTTACCCATGGTTAAATAT +
Preference number: 3 (lower is better)
Translates to: LPHGTSCVLCIYTTAIFLLCFGR*LPMVKY
Trigger: ATATTTAACCATGGGTAACAATCTCCCAAAGCAGAG...AAGAAAGATGGCTGTTGTATATATGCACAAAACACAGCTCGTTCCATGAGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR TCA 72 bp CTTGATTGCTTTGACATTTGTTCTGATAATGAAATATaGCGAGGAACAACTGCTTGGCCACATGCAGCTTCT +
Preference number: 3 (lower is better)
Translates to: LDCFDICSDNEI*RGTTAWPHAAS
Trigger: AGAAGCTGCATGTGGCCAAGCAGTTGTTCCTCGTCATATTTCATTATCAGAACAAATGTCAAAGCAATCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR TCA 72 bp ATCTTAGTGATGGATTTGAGTCAATTGCATGGAACCTaGCGTAAGCCTTTCTGCTGCAAATATTACATCCCA +
Preference number: 3 (lower is better)
Translates to: ILVMDLSQLHGT*RKPFCCKYYIP
Trigger: TGGGATGTAATATTTGCAGCAGAAAGGCTTACGTCAGGTTCCATGCAATTGACTCAAATCCATCACTAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR GCA 72 bp CCAATGATAGCAATTATAAATGAATTCCAAAGGCTTTaGACCTGTTCAACTACATCCCTCCTTCTGAGAGCA +
Preference number: 3 (lower is better)
Translates to: PMIAIINEFQRL*TCSTTSLLLRA
Trigger: TGCTCTCAGAAGGAGGGATGTAGTTGAACAGGTGCAAAGCCTTTGGAATTCATTTATAATTGCTATCATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR GCA 72 bp CATCTGTCACTTTCTAGTGTCCAGGGCTTTTTGTTATaGTACATAGTAAGGGTCGTTTATTATGGACCTGTT +
Preference number: 3 (lower is better)
Translates to: HLSLSSVQGFLL*YIVRVVYYGPV
Trigger: AACAGGTCCATAATAAACGACCCTTACTATGTAGCATAACAAAAAGCCCTGGACACTAGAAAGTGACAGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 72 bp CCTGTAACTTTAAATAAACTGGGTGTGGGGAGGGGCTaGCCACTGTATAGCTTGTTTATATTTCATATAGTT +
Preference number: 3 (lower is better)
Translates to: PVTLNKLGVGRG*PLYSLFIFHIV
Trigger: AACTATATGAAATATAAACAAGCTATACAGTGGCCAGCCCCTCCCCACACCCAGTTTATTTAAAGTTACAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 72 bp TTTTATGTGCAATTTCAGATCAGTAATGAAGCATTTTaGCCAAGGCCATTCTGGTATTTGCTCCAGGTACGA +
Preference number: 3 (lower is better)
Translates to: FYVQFQISNEAF*PRPFWYLLQVR
Trigger: TCGTACCTGGAGCAAATACCAGAATGGCCTTGGCCAAAATGCTTCATTACTGATCTGAAATTGCACATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 72 bp GGTGACATTTCAAAGGTCAGAGAGGATATTAAGGCTTaGAATCTTAGTGATGGATTTGAGTCAATTGCATGG +
Preference number: 3 (lower is better)
Translates to: GDISKVREDIKA*NLSDGFESIAW
Trigger: CCATGCAATTGACTCAAATCCATCACTAAGATTCCAAGCCTTAATATCCTCTCTGACCTTTGAAATGTCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR TCA 72 bp TTCTATTCACTCAGTCACTACATGTTGGTTAAACAATaGATGGTTATGATCACTGAGTGGAAGGAGGGAAAG +
Preference number: 3 (lower is better)
Translates to: FYSLSHYMLVKQ*MVMITEWKEGK
Trigger: CTTTCCCTCCTTCCACTCAGTGATCATAACCATTCATTGTTTAACCAACATGTAGTGACTGAGTGAATAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR TCA 72 bp AGAATCACACTTTTAGAAAAGATCTCCTTGCAGATTTaGGCTCCTCTATTATGTGTCTTCAAGGGAGTCCAA +
Preference number: 3 (lower is better)
Translates to: RITLLEKISLQI*APLLCVFKGVQ
Trigger: TTGGACTCCCTTGAAGACACATAATAGAGGAGCTCAAATCTGCAAGGAGATCTTTTCTAAAAGTGTGATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR GCA 72 bp GTAATGAAGCATTTTGGCCAAGGCCATTCTGGTATTTaGTCCAGGTACGATTTAAGAAGTATTTTTGTGACA +
Preference number: 3 (lower is better)
Translates to: VMKHFGQGHSGI*SRYDLRSIFVT
Trigger: TGTCACAAAAATACTTCTTAAATCGTACCTGGAGCAAATACCAGAATGGCCTTGGCCAAAATGCTTCATTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR GCA 72 bp AAGGGTCGTTTATTATGGACCTGTTTATCTGCTCTTTaGAATTCAAATCCAGGCTTATTTCAAGGCTTCATG +
Preference number: 3 (lower is better)
Translates to: KGRLLWTCLSAL*NSNPGLFQGFM
Trigger: CATGAAGCCTTGAAATAAGCCTGGATTTGAATTGCAAAGAGCAGATAAACAGGTCCATAATAAACGACCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 72 bp TATTTCACAGCTTTCCTACTCATTACTGATGCTGCTTaGCCACAGACTAAAGAATCACTGAAGTTGCTTATT +
Preference number: 3 (lower is better)
Translates to: YFTAFLLITDAA*PQTKESLKLLI
Trigger: AATAAGCAACTTCAGTGATTCTTTAGTCTGTGGCCAAGCAGCATCAGTAATGAGTAGGAAAGCTGTGAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR CAA 90 bp AAGTATTTTTGTGACATCTTTTGGGATAGTCATTTCTCTATAACAAGGAGGCTCGGTCAACTGCCTTTGTaGTGCAATTTTAATGTGCCT +
Preference number: 3 (lower is better)
Translates to: KYFCDIFWDSHFSITRRLGQLPL*CNFNVP
Trigger: AGGCACATTAAAATTGCACAACAAAGGCAGTTGACC...GAGCCTCCTTGTTATAGAGAAATGACTATCCCAAAAGATGTCACAAAAATACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR TCA 72 bp CGATGTTGGTTAGTGGAAGCTCTGAACACCGATGAGTaGATCCTGAGTAGTAATAAAGCAATTTTATTTTCA +
Preference number: 3 (lower is better)
Translates to: RCWLVEALNTDE*ILSSNKAILFS
Trigger: TGAAAATAAAATTGCTTTATTACTACTCAGGATTCACTCATCGGTGTTCAGAGCTTCCACTAACCAACATCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR TCA 72 bp TCTGAACAGAATGGAAAGTCAGTGAGTGATCCTGGATaGAGGTCAGTAGTTAATAGCAGTTACTTAGTAATT +
Preference number: 3 (lower is better)
Translates to: SEQNGKSVSDPG*RSVVNSSYLVI
Trigger: AATTACTAAGTAACTGCTATTAACTACTGACCTTCATCCAGGATCACTCACTGACTTTCCATTCTGTTCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR TCA 72 bp TGTGAAGATTTAAATCCAGAGCAATCTGAAGATCCATaGTCTTCTGAAGCCAAAAGATCTACCCTTCCAAAA +
Preference number: 3 (lower is better)
Translates to: CEDLNPEQSEDP*SSEAKRSTLPK
Trigger: TTTTGGAAGGGTAGATCTTTTGGCTTCAGAAGATCATGGATCTTCAGATTGCTCTGGATTTAAATCTTCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR TCA 72 bp AAACTGAAAGACTCAGTTAATCTTCCATGTAGATCATaGCCAAACTACTGCTCAAGGCATTCCAAGTATGAT +
Preference number: 3 (lower is better)
Translates to: KLKDSVNLPCRS*PNYCSRHSKYD
Trigger: ATCATACTTGGAATGCCTTGAGCAGTAGTTTGGTCATGATCTACATGGAAGATTAACTGAGTCTTTCAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR GCA 72 bp CCATTAATAAAATCAACTAGCACTATCTATCATCTGTaGCAGACAGAGCAGATGTGCAATAAATATGTTGGG +
Preference number: 3 (lower is better)
Translates to: PLIKSTSTIYHL*QTEQMCNKYVG
Trigger: CCCAACATATTTATTGCACATCTGCTCTGTCTGGCACAGATGATAGATAGTGCTAGTTGATTTTATTAATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 72 bp ATCAATCAGTCAAGAATTTTGCTGAGGTCTACTAAGTaGTCAAGGATCCTCACTATAATACTCAGTTTGGTT +
Preference number: 3 (lower is better)
Translates to: INQSRILLRSTK*SRILTIILSLV
Trigger: AACCAAACTGAGTATTATAGTGAGGATCCTTGACCACTTAGTAGACCTCAGCAAAATTCTTGACTGATTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR CAA 90 bp AAGTATTTTTGTGACATCTTTTGGGATAGTCATTTCTCTATAACAAGGAGGCTCAAAACCGTATTCACATaGCTATATTGTCTAAGGCTG +
Preference number: 3 (lower is better)
Translates to: KYFCDIFWDSHFSITRRLKTVFT*LYCLRL
Trigger: CAGCCTTAGACAATATAGCAATGTGAATACGGTTTT...GAGCCTCCTTGTTATAGAGAAATGACTATCCCAAAAGATGTCACAAAAATACTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR-3UTR CAA 90 bp AAGTATTTTTGTGACATCTTTTGGGATAGTCATTTCTCTATAACAAGGAGGCTCAATCCTTTCTATCTTTaGAATGCTTTTCATCTGGGG +
Preference number: 3 (lower is better)
Translates to: KYFCDIFWDSHFSITRRLNPFYL*NAFHLG
Trigger: CCCCAGATGAAAAGCATTCAAAAGATAGAAAGGATT...GAGCCTCCTTGTTATAGAGAAATGACTATCCCAAAAGATGTCACAAAAATACTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR TCA 72 bp TTGGTTCCAATTTACTATTTCCTAAGGAAATCTGAATaGGCGATCAGATTCGACACAAAGAAATCATTGCAG +
Preference number: 3 (lower is better)
Translates to: LVPIYYFLRKSE*AIRFDTKKSLQ
Trigger: CTGCAATGATTTCTTTGTGTCGAATCTGATCGCTCATTCAGATTTCCTTAGGAAATAGTAAATTGGAACCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR TCA 72 bp AGAAGAATAGTTGTGGCCTTAACAAGGTCATTGAGTTaGAATCCTTTCTATCTTTTGAATGCTTTTCATCTG +
Preference number: 3 (lower is better)
Translates to: RRIVVALTRSLS*NPFYLLNAFHL
Trigger: CAGATGAAAAGCATTCAAAAGATAGAAAGGATTTCAACTCAATGACCTTGTTAAGGCCACAACTATTCTTCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CCA 72 bp CAGGTACGATTTAAGAAGTATTTTTGTGACATCTTTTaGGATAGTCATTTCTCTATAACAAGGAGGCTCTTT +
Preference number: 3 (lower is better)
Translates to: QVRFKKYFCDIF*DSHFSITRRLF
Trigger: AAAGAGCCTCCTTGTTATAGAGAAATGACTATCCCAAAAGATGTCACAAAAATACTTCTTAAATCGTACCTG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR GCA 90 bp GTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGCCACTTCCCACGATGGTaGTGGGACCCAGGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: VYQLSGTAPSVPVPLKPCHFPRW*WDPGPL
Trigger: CAGGGGACCTGGGTCCCAGCACCATCGTGGGAAGTG...GCACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR TCA 90 bp TGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGTGCCGGGGGACACTTTaGACTGTTCCCCGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: CVPIVRNSTECACPPKAVCRGTL*TVPRWP
Trigger: CGGCCAACGGGGAACAGTTCAAAGTGTCCCCCGGCA...CACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp TACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGCACACAGCACTTCCCACGATaGTGCTGGGACCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: YQLSGTAPSVPVPLKPCTQHFPR*CWDPGP
Trigger: GGGACCTGGGTCCCAGCACCATCGTGGGAAGTGCTG...TGTGCACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp GTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGCACTGTGCTCGCCTAGGATaGGGCGCCCCATTTCCGCAA +
Preference number: 4 (lower is better)
Translates to: VPIVRNSTECACPPKAVHCARLG*GAPFPQ
Trigger: TTGCGGAAATGGGGCGCCCCATCCTAGGCGAGCACA...GTGCACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp GTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGCGGTAGATGGCAGCAATaGACCAGGCCACGCCGATTC +
Preference number: 4 (lower is better)
Translates to: VYQLSGTAPSVPVPLKPCGRWQQ*TRPRRF
Trigger: GAATCGGCGTGGCCTGGTCCATTGCTGCCATCTACC...GCACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR GCA 90 bp ACAGTGAGGAGAGGGGACATTCCACAGTACAGAACATGCTGTGCCACTGGTGATGGGACCCAGGTCCCCTaGGGTGAAGTTATGGCCGCA +
Preference number: 4 (lower is better)
Translates to: TVRRGDIPQYRTCCATGDGTQVP*GEVMAA
Trigger: TGCGGCCATAACTTCACCGCAGGGGACCTGGGTCCC...ATCACCAGTGGCACAGCATGTTCTGTACTGTGGAATGTCCCCTCTCCTCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR GCA 90 bp GTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGCCAACAAACACAGTGGTaGTCAAGTCGCCCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: VYQLSGTAPSVPVPLKPCQQTQW*SSRPLC
Trigger: GCAGAGGGGGCGACTTGAGCACCACTGTGTTTGTTG...GCACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR GCA 90 bp GTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCACCTCCAGCTTGGTGTaGTCGCCTAGGATGGGGCGC +
Preference number: 4 (lower is better)
Translates to: VSIMCTNCQEQHRVCLSPTSSLV*SPRMGR
Trigger: GCGCCCCATCCTAGGCGAGCACACCAAGCTGGAGGT...GGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp GTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCCAGCACTTCCCACGATaGTGCTGGGACCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: VSIMCTNCQEQHRVCLSPQHFPR*CWDPGP
Trigger: GGGACCTGGGTCCCAGCACCATCGTGGGAAGTGCTG...GGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR TCA 90 bp GTGACAGTGAGGAGAGGGGACATTCCACAGTACAGAACATGCTGTGCCACTGGTGGGTCTCCCCTGGTTTaGAGATCACAGTCCCTTCCG +
Preference number: 4 (lower is better)
Translates to: VTVRRGDIPQYRTCCATGGSPLV*RSQSLP
Trigger: CGGAAGGGACTGTGATCTTCAAACCAGGGGAGACCC...ACCAGTGGCACAGCATGTTCTGTACTGTGGAATGTCCCCTCTCCTCACTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR GCA 90 bp GTTTCTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGGGGACCCAGGTCCCCTaGGGTGAAGTTATGGCCGCA +
Preference number: 4 (lower is better)
Translates to: VSDFRPSTDVLEAGFHQQGTQVP*GEVMAA
Trigger: TGCGGCCATAACTTCACCGCAGGGGACCTGGGTCCC...CTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR GCA 90 bp GTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGCACTGACAGCCTTCCTTaGTTGATCAGCTGCGTGCCT +
Preference number: 4 (lower is better)
Translates to: VYQLSGTAPSVPVPLKPCTDSLP*LISCVP
Trigger: AGGCACGCAGCTGATCAAGCAAGGAAGGCTGTCAGT...GCACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp GTGACAGTGAGGAGAGGGGACATTCCACAGTACAGAACATGCTGTGCCACTGGTTGGCCGCATGGTAGATaGCAGCAATGGACCAGGCCA +
Preference number: 4 (lower is better)
Translates to: VTVRRGDIPQYRTCCATGWPHGR*QQWTRP
Trigger: TGGCCTGGTCCATTGCTGCCATCTACCATGCGGCCA...ACCAGTGGCACAGCATGTTCTGTACTGTGGAATGTCCCCTCTCCTCACTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
3UTR CAA 72 bp CCACTCTGGCTTTGCCCCAGTGCCACCAAGAGAGCCTaGAAGGTTGATCCTAGGAGACCTAGAGTGACCACT +
Preference number: 4 (lower is better)
Translates to: PLWLCPSATKRA*KVDPRRPRVTT
Trigger: AGTGGTCACTCTAGGTCTCCTAGGATCAACCTTCAAGGCTCTCTTGGTGGCACTGGGGCAAAGCCAGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR TCA 90 bp TACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGCACAGGCCGCACACTTCAATaGCTGACAGGAGAATCTCAG +
Preference number: 4 (lower is better)
Translates to: YQLSGTAPSVPVPLKPCTGRTLQ*LTGESQ
Trigger: CTGAGATTCTCCTGTCAGTCATTGAAGTGTGCGGCC...TGTGCACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR TCA 90 bp GTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGCACAAACCTTCACCTCCATaGTGCCAATGCTCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: VPIVRNSTECACPPKAVHKPSPP*CQCSRS
Trigger: TGAGCGAGAGCATTGGCATCATGGAGGTGAAGGTTT...GTGCACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR TCA 90 bp GTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCAAGCCAGGTCTCCAATaGAGGCGGTCAGTAGGCCGA +
Preference number: 4 (lower is better)
Translates to: VSIMCTNCQEQHRVCLSPKPGLQ*RRSVGR
Trigger: TCGGCCTACTGACCGCCTTCATTGGAGACCTGGCTT...GGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR TCA 90 bp GAACAACTGCTTGGCCACATGCAGCTTCTTCAGCTCATGCCTACAAGCAGAAGGCAAACAGGGAAGATGTaGGGAGCTTGGCAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: EQLLGHMQLLQLMPTSRRQTGKM*GAWQSG
Trigger: CCCGGACTGCCAAGCTCCTCACATCTTCCCTGTTTG...CCTTCTGCTTGTAGGCATGAGCTGAAGAAGCTGCATGTGGCCAAGCAGTTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR GCA 90 bp CTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAACCTCCAGCTTGGTGTaGTCGCCTAGGATGGGGCGC +
Preference number: 4 (lower is better)
Translates to: LTSGLVRMFLKLDSISSLTSSLV*SPRMGR
Trigger: GCGCCCCATCCTAGGCGAGCACACCAAGCTGGAGGT...TAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR GCA 90 bp GTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGCCTGGTCCTGGGTAGCTaGTACTTTGCTGGCAAATGT +
Preference number: 4 (lower is better)
Translates to: VYQLSGTAPSVPVPLKPCLVLGS*YFAGKC
Trigger: ACATTTGCCAGCAAAGTAGCAGCTACCCAGGACCAG...GCACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp CTGCCTCCATGCCTTGTTCAACTTGATGATGCCCGGGAATGGGAGATGATGGTTTGGCCGCATGGTAGATaGCAGCAATGGACCAGGCCA +
Preference number: 4 (lower is better)
Translates to: LPPCLVQLDDAREWEMMVWPHGR*QQWTRP
Trigger: TGGCCTGGTCCATTGCTGCCATCTACCATGCGGCCA...AACCATCATCTCCCATTCCCGGGCATCATCAAGTTGAACAAGGCATGGAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CAA 72 bp CCCAGCCGGAGCAAATGGACAAGCAGCGCCCAAGCTTaGACCACCACCAACAGAAGCACACAGATTCTTGAA +
Preference number: 4 (lower is better)
Translates to: PSRSKWTSSAQA*TTTNRSTQILE
Trigger: TTCAAGAATCTGTGTGCTTCTGTTGGTGGTGGTCAAAGCTTGGGCGCTGCTTGTCCATTTGCTCCGGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CAA 72 bp CGGGTGATGAGGAGGAGTGAGATAAATGGGCTGTGCTaGGGCTGGAGCTGCAAGTGGTCAGGTGTGTTTAAC +
Preference number: 4 (lower is better)
Translates to: RVMRRSEINGLC*GWSCKWSGVFN
Trigger: GTTAAACACACCTGACCACTTGCAGCTCCAGCCCAAGCACAGCCCATTTATCTCACTCCTCCTCATCACCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR TCA 90 bp TGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGGCACACTTCAATGACTaGCAGGAGAATCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: CVPIVRNSTECACPPKAVAHFND*QENLRS
Trigger: GCTCCTGAGATTCTCCTGTCAGTCATTGAAGTGTGC...CACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR TCA 90 bp GTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGCACACACACGCAGATGCTTaGTCTTCCTTGTCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: VPIVRNSTECACPPKAVHTHADA*SSLSLH
Trigger: ATGGAGAGACAAGGAAGATCAAGCATCTGCGTGTGT...GTGCACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR TCA 90 bp TGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGGTAGAGGGAATCGGATaGTCTCTAGCATGGACCTTC +
Preference number: 4 (lower is better)
Translates to: CVPIVRNSTECACPPKAVVEGIG*SLAWTF
Trigger: GAAGGTCCATGCTAGAGATCATCCGATTCCCTCTAC...CACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR GCA 90 bp GTGACAGTGAGGAGAGGGGACATTCCACAGTACAGAACATGCTGTGCCACTGGTACTGACAGCCTTCCTTaGTTGATCAGCTGCGTGCCT +
Preference number: 4 (lower is better)
Translates to: VTVRRGDIPQYRTCCATGTDSLP*LISCVP
Trigger: AGGCACGCAGCTGATCAAGCAAGGAAGGCTGTCAGT...ACCAGTGGCACAGCATGTTCTGTACTGTGGAATGTCCCCTCTCCTCACTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR GCA 90 bp GTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCCAACAAACACAGTGGTaGTCAAGTCGCCCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: VSIMCTNCQEQHRVCLSPQQTQW*SSRPLC
Trigger: GCAGAGGGGGCGACTTGAGCACCACTGTGTTTGTTG...GGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACAC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR GCA 90 bp ACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTACCTCCAGCTTGGTGTaGTCGCCTAGGATGGGGCGC +
Preference number: 4 (lower is better)
Translates to: TSGLVRMFLKLDSISSLSTSSLV*SPRMGR
Trigger: GCGCCCCATCCTAGGCGAGCACACCAAGCTGGAGGT...ACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp TACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGCACACCAAAAGATGGGTCTTaGGGTTCCCAAATGGGCAAG +
Preference number: 4 (lower is better)
Translates to: YQLSGTAPSVPVPLKPCTPKDGS*GSQMGK
Trigger: CTTGCCCATTTGGGAACCCCAAGACCCATCTTTTGG...TGTGCACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp ACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTCAGCACTTCCCACGATaGTGCTGGGACCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: TSGLVRMFLKLDSISSLSQHFPR*CWDPGP
Trigger: GGGACCTGGGTCCCAGCACCATCGTGGGAAGTGCTG...ACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp TGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGTTATGGTGGCAGTGCTaGGTGACCCAAGACAAGCAA +
Preference number: 4 (lower is better)
Translates to: CVPIVRNSTECACPPKAVLWWQC*VTQDKQ
Trigger: TTGCTTGTCTTGGGTCACCCAGCACTGCCACCATAA...CACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp ACAGTGAGGAGAGGGGACATTCCACAGTACAGAACATGCTGTGCCACTGGTGATGCTGGCAAATGTGTCTaGCACCGAGGTTCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: TVRRGDIPQYRTCCATGDAGKCV*HRGSKS
Trigger: GCTCTTGGAACCTCGGTGCCAGACACATTTGCCAGC...ATCACCAGTGGCACAGCATGTTCTGTACTGTGGAATGTCCCCTCTCCTCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp ACAGTGAGGAGAGGGGACATTCCACAGTACAGAACATGCTGTGCCACTGGTGATGATGGCTCCTATTTCTaGCCTCCGCCGATACAGCAG +
Preference number: 4 (lower is better)
Translates to: TVRRGDIPQYRTCCATGDDGSYF*PPPIQQ
Trigger: CTGCTGTATCGGCGGAGGCCAGAAATAGGAGCCATC...ATCACCAGTGGCACAGCATGTTCTGTACTGTGGAATGTCCCCTCTCCTCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235015.2
3UTR CAA 72 bp AATCCCACTCACTACATTCCCCTTGGGAGCAGGAATTaGGGCTGTCTTGGTCACTGTTCTGCTCCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: NPTHYIPLGSRN*GCLGHCSAPRL
Trigger: CAACCTGGGAGCAGAACAGTGACCAAGACAGCCCAAATTCCTGCTCCCAAGGGGAATGTAGTGAGTGGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CAA 72 bp ATCCAGAGGTTCTCTGAGTGCATCTCTTTGGACACCTaGGCAGGCTGCGAACAGCAAGCTGGGTACTTACCA +
Preference number: 4 (lower is better)
Translates to: IQRFSECISLDT*AGCEQQAGYLP
Trigger: TGGTAAGTACCCAGCTTGCTGTTCGCAGCCTGCCAAGGTGTCCAAAGAGATGCACTCAGAGAACCTCTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR TCA 90 bp TACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGCACATCACAGTCCCTTCCGTaGATTCATAATCAGACCCAG +
Preference number: 4 (lower is better)
Translates to: YQLSGTAPSVPVPLKPCTSQSLP*IHNQTQ
Trigger: CTGGGTCTGATTATGAATTCACGGAAGGGACTGTGA...TGTGCACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR TCA 90 bp TCTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTGGGTCTCCCCTGGTTTaGAGATCACAGTCCCTTCCG +
Preference number: 4 (lower is better)
Translates to: SDFRPSTDVLEAGFHQQFGSPLV*RSQSLP
Trigger: CGGAAGGGACTGTGATCTTCAAACCAGGGGAGACCC...AAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR GCA 90 bp TGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGAGGTATAGGCAAAGATaGTCCAGGCTGCTGTCACAA +
Preference number: 4 (lower is better)
Translates to: CVPIVRNSTECACPPKAVRYRQR*SRLLSQ
Trigger: TTGTGACAGCAGCCTGGAGCATCTTTGCCTATACCT...CACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR GCA 90 bp GTGACAGTGAGGAGAGGGGACATTCCACAGTACAGAACATGCTGTGCCACTGGTTTCCTTCAGAATCCTTaGCATCTCACGCCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: VTVRRGDIPQYRTCCATGFLQNP*HLTPGF
Trigger: GAAGCCAGGCGTGAGATGGCAAGGATTCTGAAGGAA...ACCAGTGGCACAGCATGTTCTGTACTGTGGAATGTCCCCTCTCCTCACTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR GCA 90 bp TACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGCACACCTTGCTTGATCAGCTaGGTGCCTCTTCAAGATGTT +
Preference number: 4 (lower is better)
Translates to: YQLSGTAPSVPVPLKPCTPCLIS*VPLQDV
Trigger: AACATCTTGAAGAGGCACGCAGCTGATCAAGCAAGG...TGTGCACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp GTGACAGTGAGGAGAGGGGACATTCCACAGTACAGAACATGCTGTGCCACTGGTCCTGCGGTGAAGTTATaGCCGCACACTTCAATGACT +
Preference number: 4 (lower is better)
Translates to: VTVRRGDIPQYRTCCATGPAVKL*PHTSMT
Trigger: AGTCATTGAAGTGTGCGGCCATAACTTCACCGCAGG...ACCAGTGGCACAGCATGTTCTGTACTGTGGAATGTCCCCTCTCCTCACTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp GTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCAATCAGACCCAGCATTaGCTGTGCCGTCTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: VSIMCTNCQEQHRVCLSPNQTQH*LCRLLS
Trigger: GGACAGAAGACGGCACAGCCAATGCTGGGTCTGATT...GGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp TGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGCCAGTATTCTGTAGGTaGGACGAAGGCAAACAGAAC +
Preference number: 4 (lower is better)
Translates to: CVPIVRNSTECACPPKAVPVFCR*DEGKQN
Trigger: GTTCTGTTTGCCTTCGTCCCACCTACAGAATACTGG...CACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp CTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTATGGCCGCATGGTAGATaGCAGCAATGGACCAGGCCA +
Preference number: 4 (lower is better)
Translates to: LTSGLVRMFLKLDSISSLWPHGR*QQWTRP
Trigger: TGGCCTGGTCCATTGCTGCCATCTACCATGCGGCCA...TAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp GTTTCTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGCTCACCTCCTATTTCTaGCCTCCGCCGATACAGCAG +
Preference number: 4 (lower is better)
Translates to: VSDFRPSTDVLEAGFHQQLTSYF*PPPIQQ
Trigger: CTGCTGTATCGGCGGAGGCCAGAAATAGGAGGTGAG...CTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR TCA 90 bp GTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGCTGTCAACATGAGAGTTaGCCACTTTCCCATCCATTT +
Preference number: 4 (lower is better)
Translates to: VYQLSGTAPSVPVPLKPCCQHES*PLSHPF
Trigger: AAATGGATGGGAAAGTGGTCAACTCTCATGTTGACA...GCACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR TCA 90 bp GTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCGTAGAGGGAATCGGATaGTCTCTAGCATGGACCTTC +
Preference number: 4 (lower is better)
Translates to: VSIMCTNCQEQHRVCLSPVEGIG*SLAWTF
Trigger: GAAGGTCCATGCTAGAGATCATCCGATTCCCTCTAC...GGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR TCA 90 bp TTCTGTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCAAGCCAGGTCTCCAATaGAGGCGGTCAGTAGGCCGA +
Preference number: 4 (lower is better)
Translates to: FCVNNVYQLSGTAPSVPVKPGLQ*RRSVGR
Trigger: TCGGCCTACTGACCGCCTTCATTGGAGACCTGGCTT...GACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACACAGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR GCA 90 bp CTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACCACTTCCCACGATGGTaGTGGGACCCAGGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: LVRMFLKLDSISSLSEHDHFPRW*WDPGPL
Trigger: CAGGGGACCTGGGTCCCAGCACCATCGTGGGAAGTG...GTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR GCA 90 bp CTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTACAACAAACACAGTGGTaGTCAAGTCGCCCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LTSGLVRMFLKLDSISSLQQTQW*SSRPLC
Trigger: GCAGAGGGGGCGACTTGAGCACCACTGTGTTTGTTG...TAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR GCA 90 bp TGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGTTGCTGGTCAGTGGCTaGTTGTCATCATATTCCTCT +
Preference number: 4 (lower is better)
Translates to: CVPIVRNSTECACPPKAVLLVSG*LSSYSS
Trigger: AGAGGAATATGATGACAAGCAGCCACTGACCAGCAA...CACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR GCA 90 bp ACAGTGAGGAGAGGGGACATTCCACAGTACAGAACATGCTGTGCCACTGGTGATCTGGTCCTGGGTAGCTaGTACTTTGCTGGCAAATGT +
Preference number: 4 (lower is better)
Translates to: TVRRGDIPQYRTCCATGDLVLGS*YFAGKC
Trigger: ACATTTGCCAGCAAAGTAGCAGCTACCCAGGACCAG...ATCACCAGTGGCACAGCATGTTCTGTACTGTGGAATGTCCCCTCTCCTCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp GTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCCCAAAAGATGGGTCTTaGGGTTCCCAAATGGGCAAG +
Preference number: 4 (lower is better)
Translates to: VSIMCTNCQEQHRVCLSPPKDGS*GSQMGK
Trigger: CTTGCCCATTTGGGAACCCCAAGACCCATCTTTTGG...GGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACAC
51% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp GTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTTCTCACCGTCGTCTTaGTGGTCTCTCCATTCGGTT +
Preference number: 4 (lower is better)
Translates to: VSIMCTNCQEQHRVCLSPFSPSS*WSLHSV
Trigger: AACCGAATGGAGAGACCACCAAGACGACGGTGAGAA...GGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp ACAGTGAGGAGAGGGGACATTCCACAGTACAGAACATGCTGTGCCACTGGTGATTTGCCATCTCACGCCTaGCTTCCTCATCATCTTGGT +
Preference number: 4 (lower is better)
Translates to: TVRRGDIPQYRTCCATGDLPSHA*LPHHLG
Trigger: ACCAAGATGATGAGGAAGCCAGGCGTGAGATGGCAA...ATCACCAGTGGCACAGCATGTTCTGTACTGTGGAATGTCCCCTCTCCTCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp ACAGTGAGGAGAGGGGACATTCCACAGTACAGAACATGCTGTGCCACTGGTGATTTATGGTGGCAGTGCTaGGTGACCCAAGACAAGCAA +
Preference number: 4 (lower is better)
Translates to: TVRRGDIPQYRTCCATGDLWWQC*VTQDKQ
Trigger: TTGCTTGTCTTGGGTCACCCAGCACTGCCACCATAA...ATCACCAGTGGCACAGCATGTTCTGTACTGTGGAATGTCCCCTCTCCTCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp GTGACAGTGAGGAGAGGGGACATTCCACAGTACAGAACATGCTGTGCCACTGGTCAAAAATGGTTATGGTaGCAGTGCTGGGTGACCCAA +
Preference number: 4 (lower is better)
Translates to: VTVRRGDIPQYRTCCATGQKWLW*QCWVTQ
Trigger: TTGGGTCACCCAGCACTGCCACCATAACCATTTTTG...ACCAGTGGCACAGCATGTTCTGTACTGTGGAATGTCCCCTCTCCTCACTGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp TTTTCTGTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTGTGCTCGCCTAGGATaGGGCGCCCCATTTCCGCAA +
Preference number: 4 (lower is better)
Translates to: FSVSIMCTNCQEQHRVCLCARLG*GAPFPQ
Trigger: TTGCGGAAATGGGGCGCCCCATCCTAGGCGAGCACA...CAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACACAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp GAACAACTGCTTGGCCACATGCAGCTTCTTCAGCTCATGCCTACAAGCAGAAGGTCTGCATACTGGTCCTaGGTAGCTGCTACTTTGCTG +
Preference number: 4 (lower is better)
Translates to: EQLLGHMQLLQLMPTSRRSAYWS*VAATLL
Trigger: CAGCAAAGTAGCAGCTACCCAGGACCAGTATGCAGA...CCTTCTGCTTGTAGGCATGAGCTGAAGAAGCTGCATGTGGCCAAGCAGTTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp GTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTCTGCATACTGGTCCTaGGTAGCTGCTACTTTGCTG +
Preference number: 4 (lower is better)
Translates to: VSIMCTNCQEQHRVCLSPSAYWS*VAATLL
Trigger: CAGCAAAGTAGCAGCTACCCAGGACCAGTATGCAGA...GGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp TTCTGTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCGGTAGATGGCAGCAATaGACCAGGCCACGCCGATTC +
Preference number: 4 (lower is better)
Translates to: FCVNNVYQLSGTAPSVPVGRWQQ*TRPRRF
Trigger: GAATCGGCGTGGCCTGGTCCATTGCTGCCATCTACC...GACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACACAGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp CTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTACTCACCTCCTATTTCTaGCCTCCGCCGATACAGCAG +
Preference number: 4 (lower is better)
Translates to: LTSGLVRMFLKLDSISSLLTSYF*PPPIQQ
Trigger: CTGCTGTATCGGCGGAGGCCAGAAATAGGAGGTGAG...TAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
3UTR CAA 72 bp TTTGAGATCACTTCCTGCGAAGGGGTCCCTCATCAGTaGCAAGCCACCTATCCATCTCTGCAGGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: FEITSCEGVPHQ*QATYPSLQACS
Trigger: AGAACAAGCCTGCAGAGATGGATAGGTGGCTTGCAACTGATGAGGGACCCCTTCGCAGGAAGTGATCTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CAA 72 bp ATTCTGTCTCTCTTGGGAGTTCTACGCCTCAGTGCTTaGCCCTTCTGCAGGAAGGACATTCTCTGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: ILSLLGVLRLSA*PFCRKDILCFG
Trigger: CCCAAAGCAGAGAATGTCCTTCCTGCAGAAGGGCAAAGCACTGAGGCGTAGAACTCCCAAGAGAGACAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR TCA 90 bp ACAGTGAGGAGAGGGGACATTCCACAGTACAGAACATGCTGTGCCACTGGTGATACACACGCAGATGCTTaGTCTTCCTTGTCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: TVRRGDIPQYRTCCATGDTHADA*SSLSLH
Trigger: ATGGAGAGACAAGGAAGATCAAGCATCTGCGTGTGT...ATCACCAGTGGCACAGCATGTTCTGTACTGTGGAATGTCCCCTCTCCTCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR TCA 90 bp GTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGCAAGAAATTGTCAACATaGGAGTTGACCACTTTCCCA +
Preference number: 4 (lower is better)
Translates to: VYQLSGTAPSVPVPLKPCKKLST*ELTTFP
Trigger: TGGGAAAGTGGTCAACTCTCATGTTGACAATTTCTT...GCACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR TCA 90 bp ACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTACAGCCTTCCTTGCTTaGTCAGCTGCGTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: TSGLVRMFLKLDSISSLSTAFLA*SAACLF
Trigger: GAAGAGGCACGCAGCTGATCAAGCAAGGAAGGCTGT...ACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR TCA 90 bp TCTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTATGCTCTCGCTCACGTaGGTCACGGGTTCCTCAAAT +
Preference number: 4 (lower is better)
Translates to: SDFRPSTDVLEAGFHQQFMLSLT*VTGSSN
Trigger: ATTTGAGGAACCCGTGACTCACGTGAGCGAGAGCAT...AAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR TCA 90 bp GTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGCACGCTCTCCAATCTCAATaGAGAAGGTCTTGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: VPIVRNSTECACPPKAVHALQSQ*RRSCFS
Trigger: AGAAAAACAAGACCTTCTTCATTGAGATTGGAGAGC...GTGCACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR TCA 90 bp CGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACAAATGTTGCCGGGGGACACTTTaGACTGTTCCCCGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: RMFLKLDSISSLSEHDKCCRGTL*TVPRWP
Trigger: CGGCCAACGGGGAACAGTTCAAAGTGTCCCCCGGCA...ACATTTGTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR TCA 90 bp TCACTGAGTGGAAGGAGGGAAAGGAGTTCTCAGCTACATTTATCTCTTAAGTATTGCCGGGGGACACTTTaGACTGTTCCCCGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: SLSGRRERSSQLHLSLKYCRGTL*TVPRWP
Trigger: CGGCCAACGGGGAACAGTTCAAAGTGTCCCCCGGCA...ATACTTAAGAGATAAATGTAGCTGAGAACTCCTTTCCCTCCTTCCACTCAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR GCA 90 bp GTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACAAACACTTCCCACGATGGTaGTGGGACCCAGGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: VRMFLKLDSISSLSEHDKHFPRW*WDPGPL
Trigger: CAGGGGACCTGGGTCCCAGCACCATCGTGGGAAGTG...TTTGTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR GCA 90 bp GTTTCTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTCCTTCAGAATCCTTaGCATCTCACGCCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: VSDFRPSTDVLEAGFHQQFLQNP*HLTPGF
Trigger: GAAGCCAGGCGTGAGATGGCAAGGATTCTGAAGGAA...CTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR GCA 90 bp GTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCATGGCTTCGATAAACTaGTCTCTCCAGCTGTTGGTC +
Preference number: 4 (lower is better)
Translates to: VSIMCTNCQEQHRVCLSPMASIN*SLQLLV
Trigger: GACCAACAGCTGGAGAGAGCAGTTTATCGAAGCCAT...GGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR GCA 90 bp GTTTTAGCTCAGAGACCAGCCAGTGCCTCCAAGTCCAGAACATTCAGTGTTAGTGCCTATAGACGCATCTaGATACTGGTCCTGGGTAGC +
Preference number: 4 (lower is better)
Translates to: VLAQRPASASKSRTFSVSAYRRI*ILVLGS
Trigger: GCTACCCAGGACCAGTATGCAGATGCGTCTATAGGC...ACTAACACTGAATGTTCTGGACTTGGAGGCACTGGCTGGTCTCTGAGCTAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp GTTTCTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGCCTGCGGTGAAGTTATaGCCGCACACTTCAATGACT +
Preference number: 4 (lower is better)
Translates to: VSDFRPSTDVLEAGFHQQPAVKL*PHTSMT
Trigger: AGTCATTGAAGTGTGCGGCCATAACTTCACCGCAGG...CTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp TGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGTTCAGTTTTGGAAGCTaGTCTGTCTCCTTCATGTTC +
Preference number: 4 (lower is better)
Translates to: CVPIVRNSTECACPPKAVFSFGS*SVSFMF
Trigger: GAACATGAAGGAGACAGACCAGCTTCCAAAACTGAA...CACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp ACAGTGAGGAGAGGGGACATTCCACAGTACAGAACATGCTGTGCCACTGGTGATGCTTCCTCATCATCTTaGTCCCTCTCATCAACTTCC +
Preference number: 4 (lower is better)
Translates to: TVRRGDIPQYRTCCATGDASSSS*SLSSTS
Trigger: GGAAGTTGATGAGAGGGACCAAGATGATGAGGAAGC...ATCACCAGTGGCACAGCATGTTCTGTACTGTGGAATGTCCCCTCTCCTCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp TACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGCACAGAAGATCTTACTGACTaGGTCGTTTTCAGCCATTTC +
Preference number: 4 (lower is better)
Translates to: YQLSGTAPSVPVPLKPCTEDLTD*VVFSHF
Trigger: GAAATGGCTGAAAACGACCCAGTCAGTAAGATCTTC...TGTGCACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp ACAGTGAGGAGAGGGGACATTCCACAGTACAGAACATGCTGTGCCACTGGTGATCAAAAATGGTTATGGTaGCAGTGCTGGGTGACCCAA +
Preference number: 4 (lower is better)
Translates to: TVRRGDIPQYRTCCATGDQKWLW*QCWVTQ
Trigger: TTGGGTCACCCAGCACTGCCACCATAACCATTTTTG...ATCACCAGTGGCACAGCATGTTCTGTACTGTGGAATGTCCCCTCTCCTCACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp TGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGACTATTTCATCGTTCTaGAATTCGAGCTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: CVPIVRNSTECACPPKAVTISSF*NSSSPQ
Trigger: CTGTGGAGAGCTCGAATTCCAGAACGATGAAATAGT...CACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp CTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACTGTGCTCGCCTAGGATaGGGCGCCCCATTTCCGCAA +
Preference number: 4 (lower is better)
Translates to: LVRMFLKLDSISSLSEHDCARLG*GAPFPQ
Trigger: TTGCGGAAATGGGGCGCCCCATCCTAGGCGAGCACA...GTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp GTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCCCAGTATTCTGTAGGTaGGACGAAGGCAAACAGAAC +
Preference number: 4 (lower is better)
Translates to: VSIMCTNCQEQHRVCLSPPVFCR*DEGKQN
Trigger: GTTCTGTTTGCCTTCGTCCCACCTACAGAATACTGG...GGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACAC
50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp ACAGTGAGGAGAGGGGACATTCCACAGTACAGAACATGCTGTGCCACTGGTGATTTGACATTCCGAAGATaGCTCCTATTTCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: TVRRGDIPQYRTCCATGDLTFRR*LLFLAS
Trigger: GGAGGCCAGAAATAGGAGCCATCTTCGGAATGTCAA...ATCACCAGTGGCACAGCATGTTCTGTACTGTGGAATGTCCCCTCTCCTCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235015.2
3UTR CAA 72 bp ACTACATTCCCCTTGGGAGCAGGAATTTGGGCTGTCTaGGTCACTGTTCTGCTCCCAGGTTGTAGTATTACC +
Preference number: 4 (lower is better)
Translates to: TTFPLGAGIWAV*VTVLLPGCSIT
Trigger: GGTAATACTACAACCTGGGAGCAGAACAGTGACCAAGACAGCCCAAATTCCTGCTCCCAAGGGGAATGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR TCA 90 bp TTTTCTGTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGACAGCCTTCCTTGCTTaGTCAGCTGCGTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: FSVSIMCTNCQEQHRVCLTAFLA*SAACLF
Trigger: GAAGAGGCACGCAGCTGATCAAGCAAGGAAGGCTGT...CAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACACAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR TCA 90 bp ACAGTGAGGAGAGGGGACATTCCACAGTACAGAACATGCTGTGCCACTGGTGATCAAAGAAGATCTTACTaGCTGGGTCGTTTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: TVRRGDIPQYRTCCATGDQRRSY*LGRFQP
Trigger: TGGCTGAAAACGACCCAGTCAGTAAGATCTTCTTTG...ATCACCAGTGGCACAGCATGTTCTGTACTGTGGAATGTCCCCTCTCCTCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR TCA 90 bp TCTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTTGCCGTCTTCTGTCCTaGAGTCAACAAACACAGTGG +
Preference number: 4 (lower is better)
Translates to: SDFRPSTDVLEAGFHQQFCRLLS*SQQTQW
Trigger: CCACTGTGTTTGTTGACTTCAGGACAGAAGACGGCA...AAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR TCA 90 bp GTTTCTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTCACAGTCCCTTCCGTaGATTCATAATCAGACCCAG +
Preference number: 4 (lower is better)
Translates to: VSDFRPSTDVLEAGFHQQSQSLP*IHNQTQ
Trigger: CTGGGTCTGATTATGAATTCACGGAAGGGACTGTGA...CTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR TCA 90 bp TTCTGTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCATGCTCTCGCTCACGTaGGTCACGGGTTCCTCAAAT +
Preference number: 4 (lower is better)
Translates to: FCVNNVYQLSGTAPSVPVMLSLT*VTGSSN
Trigger: ATTTGAGGAACCCGTGACTCACGTGAGCGAGAGCAT...GACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACACAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR TCA 90 bp TCTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAACCTTCACCTCCATaGTGCCAATGCTCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: SDFRPSTDVLEAGFHQQFKPSPP*CQCSRS
Trigger: TGAGCGAGAGCATTGGCATCATGGAGGTGAAGGTTT...AAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR TCA 90 bp CTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACCAAACAGGGAAGATGTaGGGAGCTTGGCAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: LVRMFLKLDSISSLSEHDQTGKM*GAWQSG
Trigger: CCCGGACTGCCAAGCTCCTCACATCTTCCCTGTTTG...GTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR GCA 90 bp TGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGTTCTGCCTCTGTATCTaGAGTTATATGGTCAACATG +
Preference number: 4 (lower is better)
Translates to: CVPIVRNSTECACPPKAVFCLCI*SYMVNM
Trigger: CATGTTGACCATATAACTGCAGATACAGAGGCAGAA...CACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR GCA 90 bp TACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGCACACACAAAATACACAGTTaGTCTAGCAATTTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: YQLSGTAPSVPVPLKPCTHKIHS*SSNFVP
Trigger: GGGGACAAAATTGCTAGAGCAACTGTGTATTTTGTG...TGTGCACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR GCA 90 bp TGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGCACTGGTATGTTCCTTaGTCAAAGAAGATCTTACTG +
Preference number: 4 (lower is better)
Translates to: CVPIVRNSTECACPPKAVHWYVP*SKKILL
Trigger: CAGTAAGATCTTCTTTGAGCAAGGAACATACCAGTG...CACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR GCA 90 bp TCTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTCTGGTCCTGGGTAGCTaGTACTTTGCTGGCAAATGT +
Preference number: 4 (lower is better)
Translates to: SDFRPSTDVLEAGFHQQFLVLGS*YFAGKC
Trigger: ACATTTGCCAGCAAAGTAGCAGCTACCCAGGACCAG...AAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp TCTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTCTTGGGGTTCCCAAATaGGCAAGATCACCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: SDFRPSTDVLEAGFHQQFLGVPK*ARSPLS
Trigger: AGAAAGGGGTGATCTTGCCCATTTGGGAACCCCAAG...AAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp TCTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTCCAAAAGATGGGTCTTaGGGTTCCCAAATGGGCAAG +
Preference number: 4 (lower is better)
Translates to: SDFRPSTDVLEAGFHQQFPKDGS*GSQMGK
Trigger: CTTGCCCATTTGGGAACCCCAAGACCCATCTTTTGG...AAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp TCTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTCCTGCGGTGAAGTTATaGCCGCACACTTCAATGACT +
Preference number: 4 (lower is better)
Translates to: SDFRPSTDVLEAGFHQQFPAVKL*PHTSMT
Trigger: AGTCATTGAAGTGTGCGGCCATAACTTCACCGCAGG...AAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp GTTTCTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGGCTTCCTCATCATCTTaGTCCCTCTCATCAACTTCC +
Preference number: 4 (lower is better)
Translates to: VSDFRPSTDVLEAGFHQQASSSS*SLSSTS
Trigger: GGAAGTTGATGAGAGGGACCAAGATGATGAGGAAGC...CTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp TCTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTTTGCCATCTCACGCCTaGCTTCCTCATCATCTTGGT +
Preference number: 4 (lower is better)
Translates to: SDFRPSTDVLEAGFHQQFLPSHA*LPHHLG
Trigger: ACCAAGATGATGAGGAAGCCAGGCGTGAGATGGCAA...AAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp TTCTGTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCAATCAGACCCAGCATTaGCTGTGCCGTCTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: FCVNNVYQLSGTAPSVPVNQTQH*LCRLLS
Trigger: GGACAGAAGACGGCACAGCCAATGCTGGGTCTGATT...GACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACACAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp TCTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTTTATGGTGGCAGTGCTaGGTGACCCAAGACAAGCAA +
Preference number: 4 (lower is better)
Translates to: SDFRPSTDVLEAGFHQQFLWWQC*VTQDKQ
Trigger: TTGCTTGTCTTGGGTCACCCAGCACTGCCACCATAA...AAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp GTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCGGTCATCATCAAAAATaGTTATGGTGGCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: VSIMCTNCQEQHRVCLSPGHHQK*LWWQCW
Trigger: CCAGCACTGCCACCATAACCATTTTTGATGATGACC...GGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp CTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTATCTGCATACTGGTCCTaGGTAGCTGCTACTTTGCTG +
Preference number: 4 (lower is better)
Translates to: LTSGLVRMFLKLDSISSLSAYWS*VAATLL
Trigger: CAGCAAAGTAGCAGCTACCCAGGACCAGTATGCAGA...TAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
3UTR CAA 72 bp TCCCAAGCAATTCCTTACAGAGTGAGCTTTCCCCTATaGCTGAGAGGCAATACCAGGCACATCACGAAGTCT +
Preference number: 4 (lower is better)
Translates to: SQAIPYRVSFPL*LRGNTRHITKS
Trigger: AGACTTCGTGATGTGCCTGGTATTGCCTCTCAGCAATAGGGGAAAGCTCACTCTGTAAGGAATTGCTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CAA 72 bp CAGCCTGTTAACTTTCTGTGCAACATTGGTAGACCTTaGAGTCCACACGTATGTGGCAGATGGGCGAGGAAA +
Preference number: 4 (lower is better)
Translates to: QPVNFLCNIGRP*SPHVCGRWARK
Trigger: TTTCCTCGCCCATCTGCCACATACGTGTGGACTCAAAGGTCTACCAATGTTGCACAGAAAGTTAACAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR TCA 90 bp TGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGTTTCTTACAGTAATATaGGCCAGTACATTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: CVPIVRNSTECACPPKAVFLTVI*ASTFSG
Trigger: ACCACTGAATGTACTGGCTCATATTACTGTAAGAAA...CACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR TCA 90 bp TGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGGTTATTTCTTTCTCTTaGGAGGTGATGACCTCTATA +
Preference number: 4 (lower is better)
Translates to: CVPIVRNSTECACPPKAVVISFS*EVMTSI
Trigger: TATAGAGGTCATCACCTCTCAAGAGAAAGAAATAAC...CACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR TCA 90 bp ACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTTGCCGTCTTCTGTCCTaGAGTCAACAAACACAGTGG +
Preference number: 4 (lower is better)
Translates to: TSGLVRMFLKLDSISSLSCRLLS*SQQTQW
Trigger: CCACTGTGTTTGTTGACTTCAGGACAGAAGACGGCA...ACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR TCA 90 bp GTGACAGTGAGGAGAGGGGACATTCCACAGTACAGAACATGCTGTGCCACTGGTGCTCTCCAATCTCAATaGAGAAGGTCTTGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: VTVRRGDIPQYRTCCATGALQSQ*RRSCFS
Trigger: AGAAAAACAAGACCTTCTTCATTGAGATTGGAGAGC...ACCAGTGGCACAGCATGTTCTGTACTGTGGAATGTCCCCTCTCCTCACTGTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR TCA 90 bp ACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGTAGAGGGAATCGGATaGTCTCTAGCATGGACCTTC +
Preference number: 4 (lower is better)
Translates to: TSGLVRMFLKLDSISSLSVEGIG*SLAWTF
Trigger: GAAGGTCCATGCTAGAGATCATCCGATTCCCTCTAC...ACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR TCA 90 bp GTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACAAAAAGCCAGGTCTCCAATaGAGGCGGTCAGTAGGCCGA +
Preference number: 4 (lower is better)
Translates to: VRMFLKLDSISSLSEHDKKPGLQ*RRSVGR
Trigger: TCGGCCTACTGACCGCCTTCATTGGAGACCTGGCTT...TTTGTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR TCA 90 bp GTTTTAGCTCAGAGACCAGCCAGTGCCTCCAAGTCCAGAACATTCAGTGTTAGTGTTGGCCTGTTAATGTaGAGCCACCTTTCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: VLAQRPASASKSRTFSVSVGLLM*SHLSSH
Trigger: GTGAGAAGAAAGGTGGCTTCACATTAACAGGCCAAC...ACTAACACTGAATGTTCTGGACTTGGAGGCACTGGCTGGTCTCTGAGCTAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR GCA 90 bp CTGCCTCCATGCCTTGTTCAACTTGATGATGCCCGGGAATGGGAGATGATGGTTAAGAACACACGCAGATaGTTGATCTTCCTTGTCTCT +
Preference number: 4 (lower is better)
Translates to: LPPCLVQLDDAREWEMMVKNTRR*LIFLVS
Trigger: AGAGACAAGGAAGATCAAGCATCTGCGTGTGTTCTT...AACCATCATCTCCCATTCCCGGGCATCATCAAGTTGAACAAGGCATGGAGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR GCA 90 bp ACAGTGAGGAGAGGGGACATTCCACAGTACAGAACATGCTGTGCCACTGGTGATAAGAACACACGCAGATaGTTGATCTTCCTTGTCTCT +
Preference number: 4 (lower is better)
Translates to: TVRRGDIPQYRTCCATGDKNTRR*LIFLVS
Trigger: AGAGACAAGGAAGATCAAGCATCTGCGTGTGTTCTT...ATCACCAGTGGCACAGCATGTTCTGTACTGTGGAATGTCCCCTCTCCTCACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR GCA 90 bp GTTTTAGCTCAGAGACCAGCCAGTGCCTCCAAGTCCAGAACATTCAGTGTTAGTAGGTATAGGCAAAGATaGTCCAGGCTGCTGTCACAA +
Preference number: 4 (lower is better)
Translates to: VLAQRPASASKSRTFSVSRYRQR*SRLLSQ
Trigger: TTGTGACAGCAGCCTGGAGCATCTTTGCCTATACCT...ACTAACACTGAATGTTCTGGACTTGGAGGCACTGGCTGGTCTCTGAGCTAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR GCA 90 bp CTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTACCTTGCTTGATCAGCTaGGTGCCTCTTCAAGATGTT +
Preference number: 4 (lower is better)
Translates to: LTSGLVRMFLKLDSISSLPCLIS*VPLQDV
Trigger: AACATCTTGAAGAGGCACGCAGCTGATCAAGCAAGG...TAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR GCA 90 bp TTTTCTGTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGGCCTATAGACGCATCTaGATACTGGTCCTGGGTAGC +
Preference number: 4 (lower is better)
Translates to: FSVSIMCTNCQEQHRVCLAYRRI*ILVLGS
Trigger: GCTACCCAGGACCAGTATGCAGATGCGTCTATAGGC...CAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACACAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp TTCTGTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCTTGGGGTTCCCAAATaGGCAAGATCACCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: FCVNNVYQLSGTAPSVPVLGVPK*ARSPLS
Trigger: AGAAAGGGGTGATCTTGCCCATTTGGGAACCCCAAG...GACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp GAACAACTGCTTGGCCACATGCAGCTTCTTCAGCTCATGCCTACAAGCAGAAGGTTCAGTTTTGGAAGCTaGTCTGTCTCCTTCATGTTC +
Preference number: 4 (lower is better)
Translates to: EQLLGHMQLLQLMPTSRRFSFGS*SVSFMF
Trigger: GAACATGAAGGAGACAGACCAGCTTCCAAAACTGAA...CCTTCTGCTTGTAGGCATGAGCTGAAGAAGCTGCATGTGGCCAAGCAGTTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp GTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGCACTTAGGACCTGGTAGTTaGCTAATTCTATTAATTGCT +
Preference number: 4 (lower is better)
Translates to: VPIVRNSTECACPPKAVHLGPGS*LILLIA
Trigger: AGCAATTAATAGAATTAGCCAACTACCAGGTCCTAA...GTGCACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp ACAGTGAGGAGAGGGGACATTCCACAGTACAGAACATGCTGTGCCACTGGTGATCAGTTCTCTAGACACTaGTATGTTCCTTGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: TVRRGDIPQYRTCCATGDQFSRH*YVPCSK
Trigger: CTTTGAGCAAGGAACATACCAGTGTCTAGAGAACTG...ATCACCAGTGGCACAGCATGTTCTGTACTGTGGAATGTCCCCTCTCCTCACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp CTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAACTCTGATTTCCTTCTaGGTCTCCCCTGGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: LTSGLVRMFLKLDSISSLTLISF*VSPGLK
Trigger: CTTCAAACCAGGGGAGACCCAGAAGGAAATCAGAGT...TAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp TCTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTACTCTGATTTCCTTCTaGGTCTCCCCTGGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: SDFRPSTDVLEAGFHQQFTLISF*VSPGLK
Trigger: CTTCAAACCAGGGGAGACCCAGAAGGAAATCAGAGT...AAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp CTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTACAAAAATGGTTATGGTaGCAGTGCTGGGTGACCCAA +
Preference number: 4 (lower is better)
Translates to: LTSGLVRMFLKLDSISSLQKWLW*QCWVTQ
Trigger: TTGGGTCACCCAGCACTGCCACCATAACCATTTTTG...TAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp AGAGTGAGCTTTCCCCTATTGCTGAGAGGCAATACCAGGCACATCACGAAGTCTGGTCATCATCAAAAATaGTTATGGTGGCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RVSFPLLLRGNTRHITKSGHHQK*LWWQCW
Trigger: CCAGCACTGCCACCATAACCATTTTTGATGATGACC...AGACTTCGTGATGTGCCTGGTATTGCCTCTCAGCAATAGGGGAAAGCTCACTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp GTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTTCTTTGCTGGTCAGTaGCTGCTTGTCATCATATTC +
Preference number: 4 (lower is better)
Translates to: VSIMCTNCQEQHRVCLSPFFAGQ*LLVIIF
Trigger: GAATATGATGACAAGCAGCCACTGACCAGCAAAGAA...GGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp CTGCCTCATGGAACGAGCTGTGTTTTGTGCATATATACAACAGCCATCTTTCTTGCTGGCAAATGTGTCTaGCACCGAGGTTCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: LPHGTSCVLCIYTTAIFLAGKCV*HRGSKS
Trigger: GCTCTTGGAACCTCGGTGCCAGACACATTTGCCAGC...AAGAAAGATGGCTGTTGTATATATGCACAAAACACAGCTCGTTCCATGAGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp GTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACAAAGGTAGATGGCAGCAATaGACCAGGCCACGCCGATTC +
Preference number: 4 (lower is better)
Translates to: VRMFLKLDSISSLSEHDKGRWQQ*TRPRRF
Trigger: GAATCGGCGTGGCCTGGTCCATTGCTGCCATCTACC...TTTGTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR TCA 90 bp CTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACGGCCGCACACTTCAATaGCTGACAGGAGAATCTCAG +
Preference number: 4 (lower is better)
Translates to: LVRMFLKLDSISSLSEHDGRTLQ*LTGESQ
Trigger: CTGAGATTCTCCTGTCAGTCATTGAAGTGTGCGGCC...GTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR TCA 90 bp ACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTACACACGCAGATGCTTaGTCTTCCTTGTCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: TSGLVRMFLKLDSISSLSTHADA*SSLSLH
Trigger: ATGGAGAGACAAGGAAGATCAAGCATCTGCGTGTGT...ACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR TCA 90 bp ACAGTGAGGAGAGGGGACATTCCACAGTACAGAACATGCTGTGCCACTGGTGATAAGAAATTGTCAACATaGGAGTTGACCACTTTCCCA +
Preference number: 4 (lower is better)
Translates to: TVRRGDIPQYRTCCATGDKKLST*ELTTFP
Trigger: TGGGAAAGTGGTCAACTCTCATGTTGACAATTTCTT...ATCACCAGTGGCACAGCATGTTCTGTACTGTGGAATGTCCCCTCTCCTCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR TCA 90 bp TTTTCTGTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTGCCGTCTTCTGTCCTaGAGTCAACAAACACAGTGG +
Preference number: 4 (lower is better)
Translates to: FSVSIMCTNCQEQHRVCLCRLLS*SQQTQW
Trigger: CCACTGTGTTTGTTGACTTCAGGACAGAAGACGGCA...CAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACACAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR TCA 90 bp TCCCCACAATTCTTATTCTATGTCTGGTGTCACCTCTTTCTGTGTACTTTTGATGGGTCTCCCCTGGTTTaGAGATCACAGTCCCTTCCG +
Preference number: 4 (lower is better)
Translates to: SPQFLFYVWCHLFLCTFDGSPLV*RSQSLP
Trigger: CGGAAGGGACTGTGATCTTCAAACCAGGGGAGACCC...ATCAAAAGTACACAGAAAGAGGTGACACCAGACATAGAATAAGAATTGTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR GCA 90 bp ACAGTGAGGAGAGGGGACATTCCACAGTACAGAACATGCTGTGCCACTGGTGATGGACATAAACCGGTCTaGAATAATAGAAACTCCAAG +
Preference number: 4 (lower is better)
Translates to: TVRRGDIPQYRTCCATGDGHKPV*NNRNSK
Trigger: CTTGGAGTTTCTATTATTGCAGACCGGTTTATGTCC...ATCACCAGTGGCACAGCATGTTCTGTACTGTGGAATGTCCCCTCTCCTCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR GCA 90 bp GTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTTCTCAGGATGCTTCTaGTTAAGTTCCTTCAGAATC +
Preference number: 4 (lower is better)
Translates to: VSIMCTNCQEQHRVCLSPFSGCF*LSSFRI
Trigger: GATTCTGAAGGAACTTAAGCAGAAGCATCCTGAGAA...GGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp ACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTCCAGTATTCTGTAGGTaGGACGAAGGCAAACAGAAC +
Preference number: 4 (lower is better)
Translates to: TSGLVRMFLKLDSISSLSPVFCR*DEGKQN
Trigger: GTTCTGTTTGCCTTCGTCCCACCTACAGAATACTGG...ACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp GTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACAAAGCTGGCAAATGTGTCTaGCACCGAGGTTCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: VRMFLKLDSISSLSEHDKAGKCV*HRGSKS
Trigger: GCTCTTGGAACCTCGGTGCCAGACACATTTGCCAGC...TTTGTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
3UTR CAA 72 bp AAAGTCCCACTGGTCACTCAGACTTCCACTCAGGAGTaGCTATCTGAACTGAAAGGTGAACAAAACAGGGCT +
Preference number: 4 (lower is better)
Translates to: KVPLVTQTSTQE*LSELKGEQNRA
Trigger: AGCCCTGTTTTGTTCACCTTTCAGTTCAGATAGCAACTCCTGAGTGGAAGTCTGAGTGACCAGTGGGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR TCA 90 bp CTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACGCACACTTCAATGACTaGCAGGAGAATCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LVRMFLKLDSISSLSEHDAHFND*QENLRS
Trigger: GCTCCTGAGATTCTCCTGTCAGTCATTGAAGTGTGC...GTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR TCA 90 bp CGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACAAATGTGGCCGCACACTTCAATaGCTGACAGGAGAATCTCAG +
Preference number: 4 (lower is better)
Translates to: RMFLKLDSISSLSEHDKCGRTLQ*LTGESQ
Trigger: CTGAGATTCTCCTGTCAGTCATTGAAGTGTGCGGCC...ACATTTGTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR TCA 90 bp CTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTATGTCAACATGAGAGTTaGCCACTTTCCCATCCATTT +
Preference number: 4 (lower is better)
Translates to: LTSGLVRMFLKLDSISSLCQHES*PLSHPF
Trigger: AAATGGATGGGAAAGTGGTCAACTCTCATGTTGACA...TAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR TCA 90 bp CGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACAAATGTATGCTCTCGCTCACGTaGGTCACGGGTTCCTCAAAT +
Preference number: 4 (lower is better)
Translates to: RMFLKLDSISSLSEHDKCMLSLT*VTGSSN
Trigger: ATTTGAGGAACCCGTGACTCACGTGAGCGAGAGCAT...ACATTTGTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR TCA 90 bp CTGCCTCATGGAACGAGCTGTGTTTTGTGCATATATACAACAGCCATCTTTCTTAAACCTTCACCTCCATaGTGCCAATGCTCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: LPHGTSCVLCIYTTAIFLKPSPP*CQCSRS
Trigger: TGAGCGAGAGCATTGGCATCATGGAGGTGAAGGTTT...AAGAAAGATGGCTGTTGTATATATGCACAAAACACAGCTCGTTCCATGAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR TCA 90 bp GTTTCTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGGCTCTCCAATCTCAATaGAGAAGGTCTTGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: VSDFRPSTDVLEAGFHQQALQSQ*RRSCFS
Trigger: AGAAAAACAAGACCTTCTTCATTGAGATTGGAGAGC...CTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAGAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR GCA 90 bp GTTTCTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTCTGCCTCTGTATCTaGAGTTATATGGTCAACATG +
Preference number: 4 (lower is better)
Translates to: VSDFRPSTDVLEAGFHQQFCLCI*SYMVNM
Trigger: CATGTTGACCATATAACTGCAGATACAGAGGCAGAA...CTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR GCA 90 bp CTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAAGAACACACGCAGATaGTTGATCTTCCTTGTCTCT +
Preference number: 4 (lower is better)
Translates to: LTSGLVRMFLKLDSISSLKNTRR*LIFLVS
Trigger: AGAGACAAGGAAGATCAAGCATCTGCGTGTGTTCTT...TAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR GCA 90 bp CGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACAAATGTACTGACAGCCTTCCTTaGTTGATCAGCTGCGTGCCT +
Preference number: 4 (lower is better)
Translates to: RMFLKLDSISSLSEHDKCTDSLP*LISCVP
Trigger: AGGCACGCAGCTGATCAAGCAAGGAAGGCTGTCAGT...ACATTTGTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR GCA 90 bp CGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACAAATGTGCCTATAGACGCATCTaGATACTGGTCCTGGGTAGC +
Preference number: 4 (lower is better)
Translates to: RMFLKLDSISSLSEHDKCAYRRI*ILVLGS
Trigger: GCTACCCAGGACCAGTATGCAGATGCGTCTATAGGC...ACATTTGTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp GTTTCTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGATCCCATTGAAACATTaGGTGGGAGACTTAATCGAA +
Preference number: 4 (lower is better)
Translates to: VSDFRPSTDVLEAGFHQQIPLKH*VGDLIE
Trigger: TTCGATTAAGTCTCCCACCCAATGTTTCAATGGGAT...CTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp CTGCCTCATGGAACGAGCTGTGTTTTGTGCATATATACAACAGCCATCTTTCTTCTTGGGGTTCCCAAATaGGCAAGATCACCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: LPHGTSCVLCIYTTAIFLLGVPK*ARSPLS
Trigger: AGAAAGGGGTGATCTTGCCCATTTGGGAACCCCAAG...AAGAAAGATGGCTGTTGTATATATGCACAAAACACAGCTCGTTCCATGAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp TTTTCTGTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGGCTTCCTCATCATCTTaGTCCCTCTCATCAACTTCC +
Preference number: 4 (lower is better)
Translates to: FSVSIMCTNCQEQHRVCLASSSS*SLSSTS
Trigger: GGAAGTTGATGAGAGGGACCAAGATGATGAGGAAGC...CAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACACAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp CTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTACAGTTCTCTAGACACTaGTATGTTCCTTGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: LTSGLVRMFLKLDSISSLQFSRH*YVPCSK
Trigger: CTTTGAGCAAGGAACATACCAGTGTCTAGAGAACTG...TAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp GTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACAAAAATCAGACCCAGCATTaGCTGTGCCGTCTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: VRMFLKLDSISSLSEHDKNQTQH*LCRLLS
Trigger: GGACAGAAGACGGCACAGCCAATGCTGGGTCTGATT...TTTGTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp TTTTCTGTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGACTCTGATTTCCTTCTaGGTCTCCCCTGGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: FSVSIMCTNCQEQHRVCLTLISF*VSPGLK
Trigger: CTTCAAACCAGGGGAGACCCAGAAGGAAATCAGAGT...CAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACACAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp TCTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTTTCTTTGCTGGTCAGTaGCTGCTTGTCATCATATTC +
Preference number: 4 (lower is better)
Translates to: SDFRPSTDVLEAGFHQQFFFAGQ*LLVIIF
Trigger: GAATATGATGACAAGCAGCCACTGACCAGCAAAGAA...AAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
3UTR CAA 72 bp GTTCCTGGGAATCTAGGCACATTATCCCTGTACCTGTaGAACAAGAGTGCCAGACACCGTATCCTTAAACTA +
Preference number: 4 (lower is better)
Translates to: VPGNLGTLSLYL*NKSARHRILKL
Trigger: TAGTTTAAGGATACGGTGTCTGGCACTCTTGTTCAACAGGTACAGGGATAATGTGCCTAGATTCCCAGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CAA 72 bp GAGTCCAAGAAAAAGTTCTGTAAATTACAAGCTCACTaGCAAGGAGTCCCAGCAGAGAGGGCTATGCAACCA +
Preference number: 4 (lower is better)
Translates to: ESKKKFCKLQAH*QGVPAERAMQP
Trigger: TGGTTGCATAGCCCTCTCTGCTGGGACTCCTTGCAAGTGAGCTTGTAATTTACAGAACTTTTTCTTGGACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR GCA 90 bp GTTTTAGCTCAGAGACCAGCCAGTGCCTCCAAGTCCAGAACATTCAGTGTTAGTTTCTCAGGATGCTTCTaGTTAAGTTCCTTCAGAATC +
Preference number: 4 (lower is better)
Translates to: VLAQRPASASKSRTFSVSFSGCF*LSSFRI
Trigger: GATTCTGAAGGAACTTAAGCAGAAGCATCCTGAGAA...ACTAACACTGAATGTTCTGGACTTGGAGGCACTGGCTGGTCTCTGAGCTAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR GCA 90 bp CTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACATGGCTTCGATAAACTaGTCTCTCCAGCTGTTGGTC +
Preference number: 4 (lower is better)
Translates to: LVRMFLKLDSISSLSEHDMASIN*SLQLLV
Trigger: GACCAACAGCTGGAGAGAGCAGTTTATCGAAGCCAT...GTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp AGAGTGAGCTTTCCCCTATTGCTGAGAGGCAATACCAGGCACATCACGAAGTCTGTATCTGCAGTTATATaGTCAACATGGGAAAACAAG +
Preference number: 4 (lower is better)
Translates to: RVSFPLLLRGNTRHITKSVSAVI*STWENK
Trigger: CTTGTTTTCCCATGTTGACCATATAACTGCAGATAC...AGACTTCGTGATGTGCCTGGTATTGCCTCTCAGCAATAGGGGAAAGCTCACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp CGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACAAATGTTTCTCACCGTCGTCTTaGTGGTCTCTCCATTCGGTT +
Preference number: 4 (lower is better)
Translates to: RMFLKLDSISSLSEHDKCFSPSS*WSLHSV
Trigger: AACCGAATGGAGAGACCACCAAGACGACGGTGAGAA...ACATTTGTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp TCACTGAGTGGAAGGAGGGAAAGGAGTTCTCAGCTACATTTATCTCTTAAGTATTTCTCACCGTCGTCTTaGTGGTCTCTCCATTCGGTT +
Preference number: 4 (lower is better)
Translates to: SLSGRRERSSQLHLSLKYFSPSS*WSLHSV
Trigger: AACCGAATGGAGAGACCACCAAGACGACGGTGAGAA...ATACTTAAGAGATAAATGTAGCTGAGAACTCCTTTCCCTCCTTCCACTCAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp GTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACAAATTGCCATCTCACGCCTaGCTTCCTCATCATCTTGGT +
Preference number: 4 (lower is better)
Translates to: VRMFLKLDSISSLSEHDKLPSHA*LPHHLG
Trigger: ACCAAGATGATGAGGAAGCCAGGCGTGAGATGGCAA...TTTGTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
3UTR CAA 72 bp CTGGCTGGCCAGGCTAGTTTGCTTGTTAGTAGGATTTaGGAGAAGAAATGTCAGAGACAAGACAATCAACAC +
Preference number: 4 (lower is better)
Translates to: LAGQASLLVSRI*EKKCQRQDNQH
Trigger: GTGTTGATTGTCTTGTCTCTGACATTTCTTCTCCAAAATCCTACTAACAAGCAAACTAGCCTGGCCAGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CAA 72 bp GAGAAGTATCATAGGCAACTGGCTGGCCAGGCTAGTTaGCTTGTTAGTAGGATTTTGGAGAAGAAATGTCAG +
Preference number: 4 (lower is better)
Translates to: EKYHRQLAGQAS*LVSRILEKKCQ
Trigger: CTGACATTTCTTCTCCAAAATCCTACTAACAAGCAAACTAGCCTGGCCAGCCAGTTGCCTATGATACTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CAA 72 bp GGCAATTTTATGCCTCTCTGGCTTATTTCTGATCCTTaGTCAATCCTGCGATGTTGGTTAGTGGAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: GNFMPLWLISDP*SILRCWLVEAL
Trigger: CAGAGCTTCCACTAACCAACATCGCAGGATTGACAAAGGATCAGAAATAAGCCAGAGAGGCATAAAATTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR GCA 90 bp ACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTCACAAAATACACAGTTaGTCTAGCAATTTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: TSGLVRMFLKLDSISSLSHKIHS*SSNFVP
Trigger: GGGGACAAAATTGCTAGAGCAACTGTGTATTTTGTG...ACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR GCA 90 bp CGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACAAATGTAGGTATAGGCAAAGATaGTCCAGGCTGCTGTCACAA +
Preference number: 4 (lower is better)
Translates to: RMFLKLDSISSLSEHDKCRYRQR*SRLLSQ
Trigger: TTGTGACAGCAGCCTGGAGCATCTTTGCCTATACCT...ACATTTGTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR GCA 90 bp GTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACAAACCTTGCTTGATCAGCTaGGTGCCTCTTCAAGATGTT +
Preference number: 4 (lower is better)
Translates to: VRMFLKLDSISSLSEHDKPCLIS*VPLQDV
Trigger: AACATCTTGAAGAGGCACGCAGCTGATCAAGCAAGG...TTTGTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR GCA 90 bp TTCTGTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCACTGGTATGTTCCTTaGTCAAAGAAGATCTTACTG +
Preference number: 4 (lower is better)
Translates to: FCVNNVYQLSGTAPSVPVHWYVP*SKKILL
Trigger: CAGTAAGATCTTCTTTGAGCAAGGAACATACCAGTG...GACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACACAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR GCA 90 bp CTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAGATTGGATTCTAGTATaGCATCTTCTGAAACATCTG +
Preference number: 4 (lower is better)
Translates to: LTSGLVRMFLKLDSISSLDWILV*HLLKHL
Trigger: CAGATGTTTCAGAAGATGGCATACTAGAATCCAATC...TAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR GCA 90 bp TCACTGAGTGGAAGGAGGGAAAGGAGTTCTCAGCTACATTTATCTCTTAAGTATATGGCTTCGATAAACTaGTCTCTCCAGCTGTTGGTC +
Preference number: 4 (lower is better)
Translates to: SLSGRRERSSQLHLSLKYMASIN*SLQLLV
Trigger: GACCAACAGCTGGAGAGAGCAGTTTATCGAAGCCAT...ATACTTAAGAGATAAATGTAGCTGAGAACTCCTTTCCCTCCTTCCACTCAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp CTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAGTATCTGCAGTTATATaGTCAACATGGGAAAACAAG +
Preference number: 4 (lower is better)
Translates to: LTSGLVRMFLKLDSISSLVSAVI*STWENK
Trigger: CTTGTTTTCCCATGTTGACCATATAACTGCAGATAC...TAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp TTTTCTGTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGACTATTTCATCGTTCTaGAATTCGAGCTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: FSVSIMCTNCQEQHRVCLTISSF*NSSSPQ
Trigger: CTGTGGAGAGCTCGAATTCCAGAACGATGAAATAGT...CAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACACAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
3UTR CAA 72 bp ACAAATGACAGTAGAAACAACACGTTTCTATTTGCTTaGAGATCACTTCCTGCGAAGGGGTCCCTCATCAGT +
Preference number: 4 (lower is better)
Translates to: TNDSRNNTFLFA*RSLPAKGSLIS
Trigger: ACTGATGAGGGACCCCTTCGCAGGAAGTGATCTCAAAGCAAATAGAAACGTGTTGTTTCTACTGTCATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR TCA 90 bp ACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGTTATTTCTTTCTCTTaGGAGGTGATGACCTCTATA +
Preference number: 4 (lower is better)
Translates to: TSGLVRMFLKLDSISSLSVISFS*EVMTSI
Trigger: TATAGAGGTCATCACCTCTCAAGAGAAAGAAATAAC...ACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR TCA 90 bp GTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACAAACAAAGAAGATCTTACTaGCTGGGTCGTTTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: VRMFLKLDSISSLSEHDKQRRSY*LGRFQP
Trigger: TGGCTGAAAACGACCCAGTCAGTAAGATCTTCTTTG...TTTGTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR TCA 90 bp CGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACAAATGTCAAAGAAGATCTTACTaGCTGGGTCGTTTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: RMFLKLDSISSLSEHDKCQRRSY*LGRFQP
Trigger: TGGCTGAAAACGACCCAGTCAGTAAGATCTTCTTTG...ACATTTGTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR GCA 90 bp GTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACAAATTGCTGGTCAGTGGCTaGTTGTCATCATATTCCTCT +
Preference number: 4 (lower is better)
Translates to: VRMFLKLDSISSLSEHDKLLVSG*LSSYSS
Trigger: AGAGGAATATGATGACAAGCAGCCACTGACCAGCAA...TTTGTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp TTTTCTGTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGATCCCATTGAAACATTaGGTGGGAGACTTAATCGAA +
Preference number: 4 (lower is better)
Translates to: FSVSIMCTNCQEQHRVCLIPLKH*VGDLIE
Trigger: TTCGATTAAGTCTCCCACCCAATGTTTCAATGGGAT...CAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACACAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp CTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACTTCAGTTTTGGAAGCTaGTCTGTCTCCTTCATGTTC +
Preference number: 4 (lower is better)
Translates to: LVRMFLKLDSISSLSEHDFSFGS*SVSFMF
Trigger: GAACATGAAGGAGACAGACCAGCTTCCAAAACTGAA...GTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp TCTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTTTAGGACCTGGTAGTTaGCTAATTCTATTAATTGCT +
Preference number: 4 (lower is better)
Translates to: SDFRPSTDVLEAGFHQQFLGPGS*LILLIA
Trigger: AGCAATTAATAGAATTAGCCAACTACCAGGTCCTAA...AAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp CTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACGAAGATCTTACTGACTaGGTCGTTTTCAGCCATTTC +
Preference number: 4 (lower is better)
Translates to: LVRMFLKLDSISSLSEHDEDLTD*VVFSHF
Trigger: GAAATGGCTGAAAACGACCCAGTCAGTAAGATCTTC...GTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp CTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACCAGTTCTCTAGACACTaGTATGTTCCTTGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: LVRMFLKLDSISSLSEHDQFSRH*YVPCSK
Trigger: CTTTGAGCAAGGAACATACCAGTGTCTAGAGAACTG...GTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp TTCTGTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCTTGAAGAAGCGTGATTaGATTCTAGTATGCCATCTT +
Preference number: 4 (lower is better)
Translates to: FCVNNVYQLSGTAPSVPVLKKRD*ILVCHL
Trigger: AAGATGGCATACTAGAATCCAATCACGCTTCTTCAA...GACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACACAGAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp GTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACAAAGGTCATCATCAAAAATaGTTATGGTGGCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: VRMFLKLDSISSLSEHDKGHHQK*LWWQCW
Trigger: CCAGCACTGCCACCATAACCATTTTTGATGATGACC...TTTGTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp CTGCCTCATGGAACGAGCTGTGTTTTGTGCATATATACAACAGCCATCTTTCTTTTCTTTGCTGGTCAGTaGCTGCTTGTCATCATATTC +
Preference number: 4 (lower is better)
Translates to: LPHGTSCVLCIYTTAIFLFFAGQ*LLVIIF
Trigger: GAATATGATGACAAGCAGCCACTGACCAGCAAAGAA...AAGAAAGATGGCTGTTGTATATATGCACAAAACACAGCTCGTTCCATGAGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CAA 72 bp CTGCTCTTTGGTATTTTGAATGGAAAGAGTCATTCCTaGCAATGGTTACTCCCAGTCTCTTTGAGTAACGTC +
Preference number: 4 (lower is better)
Translates to: LLFGILNGKSHS*QWLLPVSLSNV
Trigger: GACGTTACTCAAAGAGACTGGGAGTAACCATTGCAAGGAATGACTCTTTCCATTCAAAATACCAAAGAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CAA 72 bp AAGCCGTCCCATTTCCCATCAGTAGAATCACAGCTTTaGGAATGTTGGGTTTATCTCTGCTCTTTGGTATTT +
Preference number: 4 (lower is better)
Translates to: KPSHFPSVESQL*ECWVYLCSLVF
Trigger: AAATACCAAAGAGCAGAGATAAACCCAACATTCCAAAAGCTGTGATTCTACTGATGGGAAATGGGACGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CAA 72 bp GCCATGCAAACCGCTGACTGGATCAATGGTTTTGAATaGCAGCATGAACTAAAACAACCCAAAGAGATTGTT +
Preference number: 4 (lower is better)
Translates to: AMQTADWINGFE*QHELKQPKEIV
Trigger: AACAATCTCTTTGGGTTGTTTTAGTTCATGCTGCAATTCAAAACCATTGATCCAGTCAGCGGTTTGCATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR TCA 90 bp TTTTCTGTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTTTCTTACAGTAATATaGGCCAGTACATTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: FSVSIMCTNCQEQHRVCLFLTVI*ASTFSG
Trigger: ACCACTGAATGTACTGGCTCATATTACTGTAAGAAA...CAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACACAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR TCA 90 bp AAGTATTTTTGTGACATCTTTTGGGATAGTCATTTCTCTATAACAAGGAGGCTCGCACACTTCAATGACTaGCAGGAGAATCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: KYFCDIFWDSHFSITRRLAHFND*QENLRS
Trigger: GCTCCTGAGATTCTCCTGTCAGTCATTGAAGTGTGC...GAGCCTCCTTGTTATAGAGAAATGACTATCCCAAAAGATGTCACAAAAATACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR TCA 90 bp CGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACAAATGTTGTCAACATGAGAGTTaGCCACTTTCCCATCCATTT +
Preference number: 4 (lower is better)
Translates to: RMFLKLDSISSLSEHDKCCQHES*PLSHPF
Trigger: AAATGGATGGGAAAGTGGTCAACTCTCATGTTGACA...ACATTTGTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR GCA 90 bp CTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACTTCTGCCTCTGTATCTaGAGTTATATGGTCAACATG +
Preference number: 4 (lower is better)
Translates to: LVRMFLKLDSISSLSEHDFCLCI*SYMVNM
Trigger: CATGTTGACCATATAACTGCAGATACAGAGGCAGAA...GTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR GCA 90 bp CTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACTTCTCAGGATGCTTCTaGTTAAGTTCCTTCAGAATC +
Preference number: 4 (lower is better)
Translates to: LVRMFLKLDSISSLSEHDFSGCF*LSSFRI
Trigger: GATTCTGAAGGAACTTAAGCAGAAGCATCCTGAGAA...GTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR GCA 90 bp CTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACCACTGGTATGTTCCTTaGTCAAAGAAGATCTTACTG +
Preference number: 4 (lower is better)
Translates to: LVRMFLKLDSISSLSEHDHWYVP*SKKILL
Trigger: CAGTAAGATCTTCTTTGAGCAAGGAACATACCAGTG...GTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR GCA 90 bp TTTTCTGTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGGATTGGATTCTAGTATaGCATCTTCTGAAACATCTG +
Preference number: 4 (lower is better)
Translates to: FSVSIMCTNCQEQHRVCLDWILV*HLLKHL
Trigger: CAGATGTTTCAGAAGATGGCATACTAGAATCCAATC...CAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACACAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CCA 90 bp GTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACAAAACTATTTCATCGTTCTaGAATTCGAGCTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: VRMFLKLDSISSLSEHDKTISSF*NSSSPQ
Trigger: CTGTGGAGAGCTCGAATTCCAGAACGATGAAATAGT...TTTGTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR TCA 90 bp CTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACTTTCTTACAGTAATATaGGCCAGTACATTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: LVRMFLKLDSISSLSEHDFLTVI*ASTFSG
Trigger: ACCACTGAATGTACTGGCTCATATTACTGTAAGAAA...GTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR TCA 90 bp GTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACAAAAAGAAATTGTCAACATaGGAGTTGACCACTTTCCCA +
Preference number: 4 (lower is better)
Translates to: VRMFLKLDSISSLSEHDKKKLST*ELTTFP
Trigger: TGGGAAAGTGGTCAACTCTCATGTTGACAATTTCTT...TTTGTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR GCA 90 bp GTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACAAAGGACATAAACCGGTCTaGAATAATAGAAACTCCAAG +
Preference number: 4 (lower is better)
Translates to: VRMFLKLDSISSLSEHDKGHKPV*NNRNSK
Trigger: CTTGGAGTTTCTATTATTGCAGACCGGTTTATGTCC...TTTGTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
3UTR CAA 72 bp GTGCTTTGCCCTTCTGCAGGAAGGACATTCTCTGCTTaGGGAGATTGTTACCCATGGTTAAATATTAAAAAT +
Preference number: 4 (lower is better)
Translates to: VLCPSAGRTFSA*GDCYPWLNIKN
Trigger: ATTTTTAATATTTAACCATGGGTAACAATCTCCCAAAGCAGAGAATGTCCTTCCTGCAGAAGGGCAAAGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp GTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACAAATTGAAGAAGCGTGATTaGATTCTAGTATGCCATCTT +
Preference number: 4 (lower is better)
Translates to: VRMFLKLDSISSLSEHDKLKKRD*ILVCHL
Trigger: AAGATGGCATACTAGAATCCAATCACGCTTCTTCAA...TTTGTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
3UTR CAA 72 bp ACTAAGTGGTCAAGGATCCTCACTATAATACTCAGTTaGGTTCTTATTCAAGAAGCAAATTCAGCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: TKWSRILTIILS*VLIQEANSACQ
Trigger: TTGGCAGGCTGAATTTGCTTCTTGAATAAGAACCAAACTGAGTATTATAGTGAGGATCCTTGACCACTTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CAA 72 bp AAGAATCACACTTTTAGAAAAGATCTCCTTGCAGATTaGAGCTCCTCTATTATGTGTCTTCAAGGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: KNHTFRKDLLAD*SSSIMCLQGSP
Trigger: TGGACTCCCTTGAAGACACATAATAGAGGAGCTCAAATCTGCAAGGAGATCTTTTCTAAAAGTGTGATTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR GCA 90 bp TCCTTTCCCATGGATAAGGATATAGATTGCACAAGGATACCTTTTTGGTCTTTAGGACATAAACCGGTCTaGAATAATAGAAACTCCAAG +
Preference number: 4 (lower is better)
Translates to: SFPMDKDIDCTRIPFWSLGHKPV*NNRNSK
Trigger: CTTGGAGTTTCTATTATTGCAGACCGGTTTATGTCC...TAAAGACCAAAAAGGTATCCTTGTGCAATCTATATCCTTATCCATGGGAAAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR GCA 90 bp TCCCCACAATTCTTATTCTATGTCTGGTGTCACCTCTTTCTGTGTACTTTTGATGATTGGATTCTAGTATaGCATCTTCTGAAACATCTG +
Preference number: 4 (lower is better)
Translates to: SPQFLFYVWCHLFLCTFDDWILV*HLLKHL
Trigger: CAGATGTTTCAGAAGATGGCATACTAGAATCCAATC...ATCAAAAGTACACAGAAAGAGGTGACACCAGACATAGAATAAGAATTGTGGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp CGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACAAATGTTTAGGACCTGGTAGTTaGCTAATTCTATTAATTGCT +
Preference number: 4 (lower is better)
Translates to: RMFLKLDSISSLSEHDKCLGPGS*LILLIA
Trigger: AGCAATTAATAGAATTAGCCAACTACCAGGTCCTAA...ACATTTGTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp TCCACAAGAACACATATCCCCAGTATAATAAATGTGATTTTGCAGGTTTCTTCTGAAGATCTTACTGACTaGGTCGTTTTCAGCCATTTC +
Preference number: 4 (lower is better)
Translates to: STRTHIPSIINVILQVSSEDLTD*VVFSHF
Trigger: GAAATGGCTGAAAACGACCCAGTCAGTAAGATCTTC...AGAAGAAACCTGCAAAATCACATTTATTATACTGGGGATATGTGTTCTTGTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CAA 72 bp GAGAAGTTAAGACAACCATTCTTAAAGGGAAGTTCTTaGATCAGTTTCAGAATGACCCCATTAAAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: EKLRQPFLKGSS*ISFRMTPLKSL
Trigger: GAGACTCTTTAATGGGGTCATTCTGAAACTGATCAAAGAACTTCCCTTTAAGAATGGTTGTCTTAACTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CAA 72 bp TCTCCACAGAATCACAAACATAGTCCATGCACATGTTaGCATGTGTTTCACACTGAAAATAGCCATAGATTA +
Preference number: 4 (lower is better)
Translates to: SPQNHKHSPCTC*HVFHTENSHRL
Trigger: TAATCTATGGCTATTTTCAGTGTGAAACACATGCAAACATGTGCATGGACTATGTTTGTGATTCTGTGGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CAA 72 bp TCAGGCAGCATGCAGGAAAAGTCATTGATTGTATCTTaGTTAGGATATACTTTGCACCAAGCTTCCAATTTT +
Preference number: 4 (lower is better)
Translates to: SGSMQEKSLIVS*LGYTLHQASNF
Trigger: AAAATTGGAAGCTTGGTGCAAAGTATATCCTAACAAAGATACAATCAATGACTTTTCCTGCATGCTGCCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp TCCACAAGAACACATATCCCCAGTATAATAAATGTGATTTTGCAGGTTTCTTCTATCCCATTGAAACATTaGGTGGGAGACTTAATCGAA +
Preference number: 4 (lower is better)
Translates to: STRTHIPSIINVILQVSSIPLKH*VGDLIE
Trigger: TTCGATTAAGTCTCCCACCCAATGTTTCAATGGGAT...AGAAGAAACCTGCAAAATCACATTTATTATACTGGGGATATGTGTTCTTGTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR CCA 90 bp TCCACAAGAACACATATCCCCAGTATAATAAATGTGATTTTGCAGGTTTCTTCTTTGAAGAAGCGTGATTaGATTCTAGTATGCCATCTT +
Preference number: 4 (lower is better)
Translates to: STRTHIPSIINVILQVSSLKKRD*ILVCHL
Trigger: AAGATGGCATACTAGAATCCAATCACGCTTCTTCAA...AGAAGAAACCTGCAAAATCACATTTATTATACTGGGGATATGTGTTCTTGTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CAA 72 bp AGAATCCATCAACAAATTAATGTTTGCTCCTATCACTaGAGAATCAATCAGTCAAGAATTTTGCTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: RIHQQINVCSYH*RINQSRILLRS
Trigger: AGACCTCAGCAAAATTCTTGACTGATTGATTCTCAAGTGATAGGAGCAAACATTAATTTGTTGATGGATTCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CAA 72 bp ACAAGAACACATATCCCCAGTATAATAAATGTGATTTaGCAGGTTTCTTCTATGTGTCATGACACTAATTCC +
Preference number: 4 (lower is better)
Translates to: TRTHIPSIINVI*QVSSMCHDTNS
Trigger: GGAATTAGTGTCATGACACATAGAAGAAACCTGCAAAATCACATTTATTATACTGGGGATATGTGTTCTTGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
3UTR CAA 72 bp TACAATATTATCTCAGGCAGCATGCAGGAAAAGTCATaGATTGTATCTTTGTTAGGATATACTTTGCACCAA +
Preference number: 4 (lower is better)
Translates to: YNIISGSMQEKS*IVSLLGYTLHQ
Trigger: TTGGTGCAAAGTATATCCTAACAAAGATACAATCAATGACTTTTCCTGCATGCTGCCTGAGATAATATTGTA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp TGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGATCATCCCCCTCTGCTaGCCGGCCCTGTACCGCTTG +
Preference number: 5 (lower is better)
Translates to: CVPIVRNSTECACPPKAVIIPLC*PALYRL
Trigger: CAAGCGGTACAGGGCCGGCAAGCAGAGGGGGATGAT...CACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS GCA 90 bp TCATCGTCATCTTCCCCAGCGCTGACAGTGATGGCTTCGATAAACTaGTCTCTCCAGCTGTTGGTCCCCACCACAAGGGCCAGGTTCGTC +
Preference number: 5 (lower is better)
Translates to: SSSSSPALTVMASIN*SLQLLVPTTRARFV
Trigger: GACGAACCTGGCCCTTGTGGTGGGGACCAACAGCTGGAGAGAGCAGTTTATCGAAGCCATCACTGTCAGCGCTGGGGAAGATGACGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CAA 90 bp GTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCGTGCCGGGGGACACTTaGAACTGTTCCCCGTTGGCC +
Preference number: 5 (lower is better)
Translates to: VSIMCTNCQEQHRVCLSPVPGDT*NCSPLA
Trigger: GGCCAACGGGGAACAGTTCAAAGTGTCCCCCGGCAC...GGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CAA 90 bp ACAGTGAGGAGAGGGGACATTCCACAGTACAGAACATGCTGTGCCACTGGTGATGTGCCGGGGGACACTTaGAACTGTTCCCCGTTGGCC +
Preference number: 5 (lower is better)
Translates to: TVRRGDIPQYRTCCATGDVPGDT*NCSPLA
Trigger: GGCCAACGGGGAACAGTTCAAAGTGTCCCCCGGCAC...ATCACCAGTGGCACAGCATGTTCTGTACTGTGGAATGTCCCCTCTCCTCACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CAA 90 bp GTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGCATTCTCACCGTCGTCTaGGTGGTCTCTCCATTCGGT +
Preference number: 5 (lower is better)
Translates to: VYQLSGTAPSVPVPLKPCILTVV*VVSPFG
Trigger: ACCGAATGGAGAGACCACCAAGACGACGGTGAGAAT...GCACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CAA 90 bp TACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGCACACTCTCCTCCTCTTCTTaGCTGGTCAGTGGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: YQLSGTAPSVPVPLKPCTLSSSS*LVSGCL
Trigger: CAAGCAGCCACTGACCAGCAAAGAAGAGGAGGAGAG...TGTGCACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CAA 90 bp GTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGCACTGGGTAGCTGCTACTTaGCTGGCAAATGTGTCTGGC +
Preference number: 5 (lower is better)
Translates to: VPIVRNSTECACPPKAVHWVAAT*LANVSG
Trigger: GCCAGACACATTTGCCAGCAAAGTAGCAGCTACCCA...GTGCACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CAA 90 bp TGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGCCCAAAAGATGGGTCTaGGGGTTCCCAAATGGGCAA +
Preference number: 5 (lower is better)
Translates to: CVPIVRNSTECACPPKAVPKRWV*GFPNGQ
Trigger: TTGCCCATTTGGGAACCCCAAGACCCATCTTTTGGG...CACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CAA 90 bp TCTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTGTGCCGGGGGACACTTaGAACTGTTCCCCGTTGGCC +
Preference number: 5 (lower is better)
Translates to: SDFRPSTDVLEAGFHQQFVPGDT*NCSPLA
Trigger: GGCCAACGGGGAACAGTTCAAAGTGTCCCCCGGCAC...AAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp ACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAAGATGTGAGGAGCTaGGCAGTCCGGGGCCCTCCC +
Preference number: 5 (lower is better)
Translates to: TSGLVRMFLKLDSISSLSEDVRS*AVRGPP
Trigger: GGGAGGGCCCCGGACTGCCAAGCTCCTCACATCTTC...ACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS TCA 90 bp AGAAGAAAATGTACAAGAGCCACAGGAGCACAAACAGGGAAGATGTaGGGAGCTTGGCAGTCCGGGGCCCTCCCAGCTCACCTCCTATTT +
Preference number: 5 (lower is better)
Translates to: RRKCTRATGAQTGKM*GAWQSGALPAHLLF
Trigger: AAATAGGAGGTGAGCTGGGAGGGCCCCGGACTGCCAAGCTCCTCACATCTTCCCTGTTTGTGCTCCTGTGGCTCTTGTACATTTTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
CDS CCA 90 bp TGCATACTGGTCCTGGGTAGCTGCTACTTTGCTGGCAAATGTGTCTaGCACCGAGGTTCCAAGAGCAACAAACACAACGGCAGTCACGGA +
Preference number: 5 (lower is better)
Translates to: CILVLGSCYFAGKCV*HRGSKSNKHNGSHG
Trigger: TCCGTGACTGCCGTTGTGTTTGTTGCTCTTGGAACCTCGGTGCCAGACACATTTGCCAGCAAAGTAGCAGCTACCCAGGACCAGTATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CAA 90 bp GTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGCCATCAGGCGAGTAGCTaGAATCCTGTAAAATGCTCG +
Preference number: 5 (lower is better)
Translates to: VYQLSGTAPSVPVPLKPCHQASS*NPVKCS
Trigger: CGAGCATTTTACAGGATTCAAGCTACTCGCCTGATG...GCACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CAA 90 bp CTCACTACATTCCCCTTGGGAGCAGGAATTTGGGCTGTCTTGGTCACTGTTCTGATTCTCACCGTCGTCTaGGTGGTCTCTCCATTCGGT +
Preference number: 5 (lower is better)
Translates to: LTTFPLGAGIWAVLVTVLILTVV*VVSPFG
Trigger: ACCGAATGGAGAGACCACCAAGACGACGGTGAGAAT...CAGAACAGTGACCAAGACAGCCCAAATTCCTGCTCCCAAGGGGAATGTAGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp TTTTCTGTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGATCATCCCCCTCTGCTaGCCGGCCCTGTACCGCTTG +
Preference number: 5 (lower is better)
Translates to: FSVSIMCTNCQEQHRVCLIIPLC*PALYRL
Trigger: CAAGCGGTACAGGGCCGGCAAGCAGAGGGGGATGAT...CAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACACAGAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CAA 90 bp GTGACAGTGAGGAGAGGGGACATTCCACAGTACAGAACATGCTGTGCCACTGGTCTGGTCAGTGGCTGCTaGTCATCATATTCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: VTVRRGDIPQYRTCCATGLVSGC*SSYSSE
Trigger: CTCAGAGGAATATGATGACAAGCAGCCACTGACCAG...ACCAGTGGCACAGCATGTTCTGTACTGTGGAATGTCCCCTCTCCTCACTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CAA 90 bp CTGCCTCCATGCCTTGTTCAACTTGATGATGCCCGGGAATGGGAGATGATGGTTTGGGTAGCTGCTACTTaGCTGGCAAATGTGTCTGGC +
Preference number: 5 (lower is better)
Translates to: LPPCLVQLDDAREWEMMVWVAAT*LANVSG
Trigger: GCCAGACACATTTGCCAGCAAAGTAGCAGCTACCCA...AACCATCATCTCCCATTCCCGGGCATCATCAAGTTGAACAAGGCATGGAGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp TGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGAGCAGCACCCCCACGTaGATGAAAGCAAAAATAGTG +
Preference number: 5 (lower is better)
Translates to: CVPIVRNSTECACPPKAVSSTPT*MKAKIV
Trigger: CACTATTTTTGCTTTCATCAACGTGGGGGTGCTGCT...CACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS TCA 90 bp GCCATTTCCATGTTGACTTCATGCATACTGACAGCCTTCCTTGCTTaGTCAGCTGCGTGCCTCTTCAAGATGTTGCCAGCTCCGGTCATC +
Preference number: 5 (lower is better)
Translates to: AISMLTSCILTAFLA*SAACLFKMLPAPVI
Trigger: GATGACCGGAGCTGGCAACATCTTGAAGAGGCACGCAGCTGATCAAGCAAGGAAGGCTGTCAGTATGCATGAAGTCAACATGGAAATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS-3UTR CAA 90 bp GTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGCATTTCGATTTCAGTTTaGGAAGCTGGTCTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: VYQLSGTAPSVPVPLKPCISISV*EAGLSP
Trigger: AGGAGACAGACCAGCTTCCAAAACTGAAATCGAAAT...GCACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CAA 90 bp TCTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTGACAGCCTTCCTTGCTaGATCAGCTGCGTGCCTCTT +
Preference number: 5 (lower is better)
Translates to: SDFRPSTDVLEAGFHQQFDSLPC*ISCVPL
Trigger: AAGAGGCACGCAGCTGATCAAGCAAGGAAGGCTGTC...AAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp TCACTGAGTGGAAGGAGGGAAAGGAGTTCTCAGCTACATTTATCTCTTAAGTATGAAGATGTGAGGAGCTaGGCAGTCCGGGGCCCTCCC +
Preference number: 5 (lower is better)
Translates to: SLSGRRERSSQLHLSLKYEDVRS*AVRGPP
Trigger: GGGAGGGCCCCGGACTGCCAAGCTCCTCACATCTTC...ATACTTAAGAGATAAATGTAGCTGAGAACTCCTTTCCCTCCTTCCACTCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS GCA 90 bp TTCAGCCATTTCCATGTTGACTTCATGCATACTGACAGCCTTCCTTaGTTGATCAGCTGCGTGCCTCTTCAAGATGTTGCCAGCTCCGGT +
Preference number: 5 (lower is better)
Translates to: FSHFHVDFMHTDSLP*LISCVPLQDVASSG
Trigger: ACCGGAGCTGGCAACATCTTGAAGAGGCACGCAGCTGATCAAGCAAGGAAGGCTGTCAGTATGCATGAAGTCAACATGGAAATGGCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS-3UTR CAA 90 bp TACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGCACAAATCCCATTGAAACATaGGGTGGGAGACTTAATCGA +
Preference number: 5 (lower is better)
Translates to: YQLSGTAPSVPVPLKPCTNPIET*GGRLNR
Trigger: TCGATTAAGTCTCCCACCCAATGTTTCAATGGGATT...TGTGCACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CAA 90 bp GTGACAGTGAGGAGAGGGGACATTCCACAGTACAGAACATGCTGTGCCACTGGTGTTGCTCTAGCAATTTaGTCCCCAAAAGATGGGTCT +
Preference number: 5 (lower is better)
Translates to: VTVRRGDIPQYRTCCATGVALAI*SPKDGS
Trigger: AGACCCATCTTTTGGGGACAAAATTGCTAGAGCAAC...ACCAGTGGCACAGCATGTTCTGTACTGTGGAATGTCCCCTCTCCTCACTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CAA 90 bp ACAGTGAGGAGAGGGGACATTCCACAGTACAGAACATGCTGTGCCACTGGTGATAACACACGCAGATGCTaGATCTTCCTTGTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: TVRRGDIPQYRTCCATGDNTRRC*IFLVSP
Trigger: TGGAGAGACAAGGAAGATCAAGCATCTGCGTGTGTT...ATCACCAGTGGCACAGCATGTTCTGTACTGTGGAATGTCCCCTCTCCTCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CAA 90 bp GTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACAAAATCATCCCCCTCTGCTaGCCGGCCCTGTACCGCTTG +
Preference number: 5 (lower is better)
Translates to: VRMFLKLDSISSLSEHDKIIPLC*PALYRL
Trigger: CAAGCGGTACAGGGCCGGCAAGCAGAGGGGGATGAT...TTTGTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp TCTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTGTTCCTTCAGAATCCTaGCCATCTCACGCCTGGCTT +
Preference number: 5 (lower is better)
Translates to: SDFRPSTDVLEAGFHQQFVPSES*PSHAWL
Trigger: AAGCCAGGCGTGAGATGGCAAGGATTCTGAAGGAAC...AAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp TACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGCACATCAGCCATTTCCATGTaGACTTCATGCATACTGACA +
Preference number: 5 (lower is better)
Translates to: YQLSGTAPSVPVPLKPCTSAISM*TSCILT
Trigger: TGTCAGTATGCATGAAGTCAACATGGAAATGGCTGA...TGTGCACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CAA 90 bp GTTTCTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGCTGGTCAGTGGCTGCTaGTCATCATATTCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: VSDFRPSTDVLEAGFHQQLVSGC*SSYSSE
Trigger: CTCAGAGGAATATGATGACAAGCAGCCACTGACCAG...CTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp AGAGTGAGCTTTCCCCTATTGCTGAGAGGCAATACCAGGCACATCACGAAGTCTCTGGTCAGTGGCTGCTaGTCATCATATTCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: RVSFPLLLRGNTRHITKSLVSGC*SSYSSE
Trigger: CTCAGAGGAATATGATGACAAGCAGCCACTGACCAG...AGACTTCGTGATGTGCCTGGTATTGCCTCTCAGCAATAGGGGAAAGCTCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp GTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCTAAAGCCGTGCGTCTTCTTAATGAGTTaGTCCACAGTGCTCTTGAAT +
Preference number: 5 (lower is better)
Translates to: VYQLSGTAPSVPVPLKPCVFLMS*STVLLN
Trigger: ATTCAAGAGCACTGTGGACAAACTCATTAAGAAGAC...GCACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CAA 90 bp ACAGTGAGGAGAGGGGACATTCCACAGTACAGAACATGCTGTGCCACTGGTGATTTGCTTCCAGTGACATaGCCTATAGACGCATCTGCA +
Preference number: 5 (lower is better)
Translates to: TVRRGDIPQYRTCCATGDLLPVT*PIDASA
Trigger: TGCAGATGCGTCTATAGGCAATGTCACTGGAAGCAA...ATCACCAGTGGCACAGCATGTTCTGTACTGTGGAATGTCCCCTCTCCTCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CAA 90 bp CTGCCTCCATGCCTTGTTCAACTTGATGATGCCCGGGAATGGGAGATGATGGTTAGCAGCACCCCCACGTaGATGAAAGCAAAAATAGTG +
Preference number: 5 (lower is better)
Translates to: LPPCLVQLDDAREWEMMVSSTPT*MKAKIV
Trigger: CACTATTTTTGCTTTCATCAACGTGGGGGTGCTGCT...AACCATCATCTCCCATTCCCGGGCATCATCAAGTTGAACAAGGCATGGAGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS TCA 90 bp TTTCGATTTCAGTTTTGGAAGCTGGTCTGTCTCCTTCATGTTCAATaGTCATCCCCCTCTGCTTGCCGGCCCTGTACCGCTTGTAGACAT +
Preference number: 5 (lower is better)
Translates to: FRFQFWKLVCLLHVQ*SSPSACRPCTACRH
Trigger: ATGTCTACAAGCGGTACAGGGCCGGCAAGCAGAGGGGGATGATCATTGAACATGAAGGAGACAGACCAGCTTCCAAAACTGAAATCGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS GCA 90 bp CCTGTACCGCTTGTAGACATACTTGTAAAAGAGAAGCCGCCTGTCTaGTACCCACGCGAACACAACGCAGATGGGAAAGAAGAAGAAAGT +
Preference number: 5 (lower is better)
Translates to: PVPLVDILVKEKPPV*YPREHNADGKEEES
Trigger: ACTTTCTTCTTCTTTCCCATCTGCGTTGTGTTCGCGTGGGTAGCAGACAGGCGGCTTCTCTTTTACAAGTATGTCTACAAGCGGTACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS GCA 90 bp ATTTCCGCAATGCGCCTCTCCTCCTCTTCTTTGCTGGTCAGTGGCTaGTTGTCATCATATTCCTCTGAGATGGTGATTACAGTAGAGGGA +
Preference number: 5 (lower is better)
Translates to: ISAMRLSSSSLLVSG*LSSYSSEMVITVEG
Trigger: TCCCTCTACTGTAATCACCATCTCAGAGGAATATGATGACAAGCAGCCACTGACCAGCAAAGAAGAGGAGGAGAGGCGCATTGCGGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS CCA 90 bp TCCTTCAGAATCCTTGCCATCTCACGCCTGGCTTCCTCATCATCTTaGTCCCTCTCATCAACTTCCAAAACCAGAGCCCCATCTAAGAAA +
Preference number: 5 (lower is better)
Translates to: SFRILAISRLASSSS*SLSSTSKTRAPSKK
Trigger: TTTCTTAGATGGGGCTCTGGTTTTGGAAGTTGATGAGAGGGACCAAGATGATGAGGAAGCCAGGCGTGAGATGGCAAGGATTCTGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS-3UTR CAA 90 bp TTCTGTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCAAAAGATGGGTCTaGGGGTTCCCAAATGGGCAA +
Preference number: 5 (lower is better)
Translates to: FCVNNVYQLSGTAPSVPVPKRWV*GFPNGQ
Trigger: TTGCCCATTTGGGAACCCCAAGACCCATCTTTTGGG...GACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CAA 90 bp GAACAACTGCTTGGCCACATGCAGCTTCTTCAGCTCATGCCTACAAGCAGAAGGGTTGCTCTAGCAATTTaGTCCCCAAAAGATGGGTCT +
Preference number: 5 (lower is better)
Translates to: EQLLGHMQLLQLMPTSRRVALAI*SPKDGS
Trigger: AGACCCATCTTTTGGGGACAAAATTGCTAGAGCAAC...CCTTCTGCTTGTAGGCATGAGCTGAAGAAGCTGCATGTGGCCAAGCAGTTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp TTTTCTGTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGGACAGCCTTCCTTGCTaGATCAGCTGCGTGCCTCTT +
Preference number: 5 (lower is better)
Translates to: FSVSIMCTNCQEQHRVCLDSLPC*ISCVPL
Trigger: AAGAGGCACGCAGCTGATCAAGCAAGGAAGGCTGTC...CAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACACAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CAA 90 bp GTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCAAGACATTCACAGCATaGCTTCCAGTGACATTGCCT +
Preference number: 5 (lower is better)
Translates to: VSIMCTNCQEQHRVCLSPKTFTA*LPVTLP
Trigger: AGGCAATGTCACTGGAAGCAATGCTGTGAATGTCTT...GGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CAA 90 bp GTGACAGTGAGGAGAGGGGACATTCCACAGTACAGAACATGCTGTGCCACTGGTCGTTATTTCTTTCTCTaGAGAGGTGATGACCTCTAT +
Preference number: 5 (lower is better)
Translates to: VTVRRGDIPQYRTCCATGRYFFL*RGDDLY
Trigger: ATAGAGGTCATCACCTCTCAAGAGAAAGAAATAACG...ACCAGTGGCACAGCATGTTCTGTACTGTGGAATGTCCCCTCTCCTCACTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CAA 90 bp TCTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAACACACGCAGATGCTaGATCTTCCTTGTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: SDFRPSTDVLEAGFHQQFNTRRC*IFLVSP
Trigger: TGGAGAGACAAGGAAGATCAAGCATCTGCGTGTGTT...AAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp TTTTCTGTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGGTTCCTTCAGAATCCTaGCCATCTCACGCCTGGCTT +
Preference number: 5 (lower is better)
Translates to: FSVSIMCTNCQEQHRVCLVPSES*PSHAWL
Trigger: AAGCCAGGCGTGAGATGGCAAGGATTCTGAAGGAAC...CAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACACAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CAA 90 bp CTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACGACAGCCTTCCTTGCTaGATCAGCTGCGTGCCTCTT +
Preference number: 5 (lower is better)
Translates to: LVRMFLKLDSISSLSEHDDSLPC*ISCVPL
Trigger: AAGAGGCACGCAGCTGATCAAGCAAGGAAGGCTGTC...GTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp CTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACCTCTCCTCCTCTTCTTaGCTGGTCAGTGGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: LVRMFLKLDSISSLSEHDLSSSS*LVSGCL
Trigger: CAAGCAGCCACTGACCAGCAAAGAAGAGGAGGAGAG...GTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp CTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTATTGCTTCCAGTGACATaGCCTATAGACGCATCTGCA +
Preference number: 5 (lower is better)
Translates to: LTSGLVRMFLKLDSISSLLLPVT*PIDASA
Trigger: TGCAGATGCGTCTATAGGCAATGTCACTGGAAGCAA...TAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS CCA 90 bp AGAGTTGACCACTTTCCCATCCATTTCGATTTCAGTTTTGGAAGCTaGTCTGTCTCCTTCATGTTCAATGATCATCCCCCTCTGCTTGCC +
Preference number: 5 (lower is better)
Translates to: RVDHFPIHFDFSFGS*SVSFMFNDHPPLLA
Trigger: GGCAAGCAGAGGGGGATGATCATTGAACATGAAGGAGACAGACCAGCTTCCAAAACTGAAATCGAAATGGATGGGAAAGTGGTCAACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS-3UTR CAA 90 bp CTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACCCCAAAAGATGGGTCTaGGGGTTCCCAAATGGGCAA +
Preference number: 5 (lower is better)
Translates to: LVRMFLKLDSISSLSEHDPKRWV*GFPNGQ
Trigger: TTGCCCATTTGGGAACCCCAAGACCCATCTTTTGGG...GTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp CTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAGTTGCTCTAGCAATTTaGTCCCCAAAAGATGGGTCT +
Preference number: 5 (lower is better)
Translates to: LTSGLVRMFLKLDSISSLVALAI*SPKDGS
Trigger: AGACCCATCTTTTGGGGACAAAATTGCTAGAGCAAC...TAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp AGAGTGAGCTTTCCCCTATTGCTGAGAGGCAATACCAGGCACATCACGAAGTCTTCAGCCATTTCCATGTaGACTTCATGCATACTGACA +
Preference number: 5 (lower is better)
Translates to: RVSFPLLLRGNTRHITKSSAISM*TSCILT
Trigger: TGTCAGTATGCATGAAGTCAACATGGAAATGGCTGA...AGACTTCGTGATGTGCCTGGTATTGCCTCTCAGCAATAGGGGAAAGCTCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp GTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCCCCCACACTGGTATGTTCCTaGCTCAAAGAAGATCTTACT +
Preference number: 5 (lower is better)
Translates to: VSIMCTNCQEQHRVCLSPTLVCS*LKEDLT
Trigger: AGTAAGATCTTCTTTGAGCAAGGAACATACCAGTGT...GGGGGACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CAA 90 bp CTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAGAAGAGACTCTGACATaGCTAAGATGCACAAGGAAG +
Preference number: 5 (lower is better)
Translates to: LTSGLVRMFLKLDSISSLEETLT*LRCTRK
Trigger: CTTCCTTGTGCATCTTAGCAATGTCAGAGTCTCTTC...TAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp CGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACAAATGTCTCTCCTCCTCTTCTTaGCTGGTCAGTGGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: RMFLKLDSISSLSEHDKCLSSSS*LVSGCL
Trigger: CAAGCAGCCACTGACCAGCAAAGAAGAGGAGGAGAG...ACATTTGTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp GAACAACTGCTTGGCCACATGCAGCTTCTTCAGCTCATGCCTACAAGCAGAAGGGTCTTCTTAATGAGTTaGTCCACAGTGCTCTTGAAT +
Preference number: 5 (lower is better)
Translates to: EQLLGHMQLLQLMPTSRRVFLMS*STVLLN
Trigger: ATTCAAGAGCACTGTGGACAAACTCATTAAGAAGAC...CCTTCTGCTTGTAGGCATGAGCTGAAGAAGCTGCATGTGGCCAAGCAGTTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS TCA 90 bp TTGGGGTTCCCAAATGGGCAAGATCACCCCTTTCTTACAGTAATATaGGCCAGTACATTCAGTGGTTTCATTTCCTCCTGTTTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: LGFPNGQDHPFLTVI*ASTFSGFISSCFCL
Trigger: GAGGCAGAAACAGGAGGAAATGAAACCACTGAATGTACTGGCTCATATTACTGTAAGAAAGGGGTGATCTTGCCCATTTGGGAACCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS TCA 90 bp ATGGTGGCAGTGCTGGGTGACCCAAGACAAGCAATTGAAGAAGCGTaGTTGGATTCTAGTATGCCATCTTCTGAAACATCTGAAGAGACT +
Preference number: 5 (lower is better)
Translates to: MVAVLGDPRQAIEEA*LDSSMPSSETSEET
Trigger: AGTCTCTTCAGATGTTTCAGAAGATGGCATACTAGAATCCAATCACGCTTCTTCAATTGCTTGTCTTGGGTCACCCAGCACTGCCACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS CCA 90 bp TTTCCTCCTGTTTCTGCCTCTGTATCTGCAGTTATATGGTCAACATaGGAAAACAAGAGAGCCACCAGAGCTACCAGACGAAATCCCATT +
Preference number: 5 (lower is better)
Translates to: FPPVSASVSAVIWST*ENKRATRATRRNPI
Trigger: AATGGGATTTCGTCTGGTAGCTCTGGTGGCTCTCTTGTTTTCCCATGTTGACCATATAACTGCAGATACAGAGGCAGAAACAGGAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS CCA 90 bp TCAGGTTCGACACAGTCTCGTTCCAGATTCTCACCGTCGTCTTGGTaGTCTCTCCATTCGGTTTCTTTATCGTTATTTCTTTCTCTTGAG +
Preference number: 5 (lower is better)
Translates to: SGSTQSRSRFSPSSW*SLHSVSLSLFLSLE
Trigger: CTCAAGAGAAAGAAATAACGATAAAGAAACCGAATGGAGAGACCACCAAGACGACGGTGAGAATCTGGAACGAGACTGTGTCGAACCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS CCA 90 bp AGGTCAGGTTCGACACAGTCTCGTTCCAGATTCTCACCGTCGTCTTaGTGGTCTCTCCATTCGGTTTCTTTATCGTTATTTCTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: RSGSTQSRSRFSPSS*WSLHSVSLSLFLSL
Trigger: AAGAGAAAGAAATAACGATAAAGAAACCGAATGGAGAGACCACCAAGACGACGGTGAGAATCTGGAACGAGACTGTGTCGAACCTGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS-3UTR CAA 90 bp CTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACCCAGACGAAATCCCATaGAAACATTGGGTGGGAGAC +
Preference number: 5 (lower is better)
Translates to: LVRMFLKLDSISSLSEHDPDEIP*KHWVGD
Trigger: GTCTCCCACCCAATGTTTCAATGGGATTTCGTCTGG...GTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp GTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACAAAATTCTCACCGTCGTCTaGGTGGTCTCTCCATTCGGT +
Preference number: 5 (lower is better)
Translates to: VRMFLKLDSISSLSEHDKILTVV*VVSPFG
Trigger: ACCGAATGGAGAGACCACCAAGACGACGGTGAGAAT...TTTGTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp TCTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTATTTCGATTTCAGTTTaGGAAGCTGGTCTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: SDFRPSTDVLEAGFHQQFISISV*EAGLSP
Trigger: AGGAGACAGACCAGCTTCCAAAACTGAAATCGAAAT...AAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp TCACTGAGTGGAAGGAGGGAAAGGAGTTCTCAGCTACATTTATCTCTTAAGTATGTTCCTTCAGAATCCTaGCCATCTCACGCCTGGCTT +
Preference number: 5 (lower is better)
Translates to: SLSGRRERSSQLHLSLKYVPSES*PSHAWL
Trigger: AAGCCAGGCGTGAGATGGCAAGGATTCTGAAGGAAC...ATACTTAAGAGATAAATGTAGCTGAGAACTCCTTTCCCTCCTTCCACTCAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp TTCTGTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCGAAGAGACTCTGACATaGCTAAGATGCACAAGGAAG +
Preference number: 5 (lower is better)
Translates to: FCVNNVYQLSGTAPSVPVEETLT*LRCTRK
Trigger: CTTCCTTGTGCATCTTAGCAATGTCAGAGTCTCTTC...GACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACACAGAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS-3UTR CAA 90 bp CTCACTACATTCCCCTTGGGAGCAGGAATTTGGGCTGTCTTGGTCACTGTTCTGTCGTCATCGATTACCTaGACTGATATTGTTTTGACT +
Preference number: 5 (lower is better)
Translates to: LTTFPLGAGIWAVLVTVLSSSIT*TDIVLT
Trigger: AGTCAAAACAATATCAGTCAAGGTAATCGATGACGA...CAGAACAGTGACCAAGACAGCCCAAATTCCTGCTCCCAAGGGGAATGTAGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp GTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACAAATGGGTAGCTGCTACTTaGCTGGCAAATGTGTCTGGC +
Preference number: 5 (lower is better)
Translates to: VRMFLKLDSISSLSEHDKWVAAT*LANVSG
Trigger: GCCAGACACATTTGCCAGCAAAGTAGCAGCTACCCA...TTTGTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp ACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTAAGACATTCACAGCATaGCTTCCAGTGACATTGCCT +
Preference number: 5 (lower is better)
Translates to: TSGLVRMFLKLDSISSLSKTFTA*LPVTLP
Trigger: AGGCAATGTCACTGGAAGCAATGCTGTGAATGTCTT...ACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp ACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTAATCCCATTGAAACATaGGGTGGGAGACTTAATCGA +
Preference number: 5 (lower is better)
Translates to: TSGLVRMFLKLDSISSLSNPIET*GGRLNR
Trigger: TCGATTAAGTCTCCCACCCAATGTTTCAATGGGATT...ACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp TCACTGAGTGGAAGGAGGGAAAGGAGTTCTCAGCTACATTTATCTCTTAAGTATCCAGACGAAATCCCATaGAAACATTGGGTGGGAGAC +
Preference number: 5 (lower is better)
Translates to: SLSGRRERSSQLHLSLKYPDEIP*KHWVGD
Trigger: GTCTCCCACCCAATGTTTCAATGGGATTTCGTCTGG...ATACTTAAGAGATAAATGTAGCTGAGAACTCCTTTCCCTCCTTCCACTCAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp CTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACAACACACGCAGATGCTaGATCTTCCTTGTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: LVRMFLKLDSISSLSEHDNTRRC*IFLVSP
Trigger: TGGAGAGACAAGGAAGATCAAGCATCTGCGTGTGTT...GTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp TCTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTACACTGGTATGTTCCTaGCTCAAAGAAGATCTTACT +
Preference number: 5 (lower is better)
Translates to: SDFRPSTDVLEAGFHQQFTLVCS*LKEDLT
Trigger: AGTAAGATCTTCTTTGAGCAAGGAACATACCAGTGT...AAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp CTGACTTCCGGCCTAGTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAGTCTTCTTAATGAGTTaGTCCACAGTGCTCTTGAAT +
Preference number: 5 (lower is better)
Translates to: LTSGLVRMFLKLDSISSLVFLMS*STVLLN
Trigger: ATTCAAGAGCACTGTGGACAAACTCATTAAGAAGAC...TAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTACTAGGCCGGAAGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp CGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACAAATGTCATCAGGCGAGTAGCTaGAATCCTGTAAAATGCTCG +
Preference number: 5 (lower is better)
Translates to: RMFLKLDSISSLSEHDKCHQASS*NPVKCS
Trigger: CGAGCATTTTACAGGATTCAAGCTACTCGCCTGATG...ACATTTGTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp GTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACAAAAGCAGCACCCCCACGTaGATGAAAGCAAAAATAGTG +
Preference number: 5 (lower is better)
Translates to: VRMFLKLDSISSLSEHDKSSTPT*MKAKIV
Trigger: CACTATTTTTGCTTTCATCAACGTGGGGGTGCTGCT...TTTGTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS GCA 90 bp TTGGCTAATTCTATTAATTGCTCAATTTCTTTCTCAGGATGCTTCTaGTTAAGTTCCTTCAGAATCCTTGCCATCTCACGCCTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: LANSINCSISFSGCF*LSSFRILAISRLAS
Trigger: GGAAGCCAGGCGTGAGATGGCAAGGATTCTGAAGGAACTTAAGCAGAAGCATCCTGAGAAAGAAATTGAGCAATTAATAGAATTAGCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS-3UTR CAA 90 bp CGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACAAATGTGAAGAGACTCTGACATaGCTAAGATGCACAAGGAAG +
Preference number: 5 (lower is better)
Translates to: RMFLKLDSISSLSEHDKCEETLT*LRCTRK
Trigger: CTTCCTTGTGCATCTTAGCAATGTCAGAGTCTCTTC...ACATTTGTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp TTCTGTGTCAATAATGTGTACCAATTGTCAGGAACAGCACCGAGTGTGCCTGTCTCGTCATCGATTACCTaGACTGATATTGTTTTGACT +
Preference number: 5 (lower is better)
Translates to: FCVNNVYQLSGTAPSVPVSSSIT*TDIVLT
Trigger: AGTCAAAACAATATCAGTCAAGGTAATCGATGACGA...GACAGGCACACTCGGTGCTGTTCCTGACAATTGGTACACATTATTGACACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS CCA 90 bp GCAAGATCACCCCTTTCTTACAGTAATATGAGCCAGTACATTCAGTaGTTTCATTTCCTCCTGTTTCTGCCTCTGTATCTGCAGTTATAT +
Preference number: 5 (lower is better)
Translates to: ARSPLSYSNMSQYIQ*FHFLLFLPLYLQLY
Trigger: ATATAACTGCAGATACAGAGGCAGAAACAGGAGGAAATGAAACCACTGAATGTACTGGCTCATATTACTGTAAGAAAGGGGTGATCTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS-3UTR CAA 90 bp CGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACAAATGTAATCCCATTGAAACATaGGGTGGGAGACTTAATCGA +
Preference number: 5 (lower is better)
Translates to: RMFLKLDSISSLSEHDKCNPIET*GGRLNR
Trigger: TCGATTAAGTCTCCCACCCAATGTTTCAATGGGATT...ACATTTGTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp TCACTGAGTGGAAGGAGGGAAAGGAGTTCTCAGCTACATTTATCTCTTAAGTATATTTCGATTTCAGTTTaGGAAGCTGGTCTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: SLSGRRERSSQLHLSLKYISISV*EAGLSP
Trigger: AGGAGACAGACCAGCTTCCAAAACTGAAATCGAAAT...ATACTTAAGAGATAAATGTAGCTGAGAACTCCTTTCCCTCCTTCCACTCAGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp CGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACAAATGTTCAGCCATTTCCATGTaGACTTCATGCATACTGACA +
Preference number: 5 (lower is better)
Translates to: RMFLKLDSISSLSEHDKCSAISM*TSCILT
Trigger: TGTCAGTATGCATGAAGTCAACATGGAAATGGCTGA...ACATTTGTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp TCCCCACAATTCTTATTCTATGTCTGGTGTCACCTCTTTCTGTGTACTTTTGATAAGACATTCACAGCATaGCTTCCAGTGACATTGCCT +
Preference number: 5 (lower is better)
Translates to: SPQFLFYVWCHLFLCTFDKTFTA*LPVTLP
Trigger: AGGCAATGTCACTGGAAGCAATGCTGTGAATGTCTT...ATCAAAAGTACACAGAAAGAGGTGACACCAGACATAGAATAAGAATTGTGGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp CGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACAAATGTCGTTATTTCTTTCTCTaGAGAGGTGATGACCTCTAT +
Preference number: 5 (lower is better)
Translates to: RMFLKLDSISSLSEHDKCRYFFL*RGDDLY
Trigger: ATAGAGGTCATCACCTCTCAAGAGAAAGAAATAACG...ACATTTGTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp TCACTGAGTGGAAGGAGGGAAAGGAGTTCTCAGCTACATTTATCTCTTAAGTATCGTTATTTCTTTCTCTaGAGAGGTGATGACCTCTAT +
Preference number: 5 (lower is better)
Translates to: SLSGRRERSSQLHLSLKYRYFFL*RGDDLY
Trigger: ATAGAGGTCATCACCTCTCAAGAGAAAGAAATAACG...ATACTTAAGAGATAAATGTAGCTGAGAACTCCTTTCCCTCCTTCCACTCAGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp AAGTATTTTTGTGACATCTTTTGGGATAGTCATTTCTCTATAACAAGGAGGCTCTTGCTTCCAGTGACATaGCCTATAGACGCATCTGCA +
Preference number: 5 (lower is better)
Translates to: KYFCDIFWDSHFSITRRLLLPVT*PIDASA
Trigger: TGCAGATGCGTCTATAGGCAATGTCACTGGAAGCAA...GAGCCTCCTTGTTATAGAGAAATGACTATCCCAAAAGATGTCACAAAAATACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS CCA 90 bp TGTAAAATGCTCGGCTTTTCTGCTGTTGACTTAGGACCTGGTAGTTaGCTAATTCTATTAATTGCTCAATTTCTTTCTCAGGATGCTTCT +
Preference number: 5 (lower is better)
Translates to: CKMLGFSAVDLGPGS*LILLIAQFLSQDAS
Trigger: AGAAGCATCCTGAGAAAGAAATTGAGCAATTAATAGAATTAGCCAACTACCAGGTCCTAAGTCAACAGCAGAAAAGCCGAGCATTTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS-3UTR CAA 90 bp GTACGGATGTTCTTGAAGCTGGATTCCATCAGCAGTTTAAGTGAACATGACAAATCGTCATCGATTACCTaGACTGATATTGTTTTGACT +
Preference number: 5 (lower is better)
Translates to: VRMFLKLDSISSLSEHDKSSSIT*TDIVLT
Trigger: AGTCAAAACAATATCAGTCAAGGTAATCGATGACGA...TTTGTCATGTTCACTTAAACTGCTGATGGAATCCAGCTTCAAGAACATCCGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000163123.3
ENSMUST00000234131.2
CDS-3UTR CAA 90 bp TCCTTTCCCATGGATAAGGATATAGATTGCACAAGGATACCTTTTTGGTCTTTAACACTGGTATGTTCCTaGCTCAAAGAAGATCTTACT +
Preference number: 5 (lower is better)
Translates to: SFPMDKDIDCTRIPFWSLTLVCS*LKEDLT
Trigger: AGTAAGATCTTCTTTGAGCAAGGAACATACCAGTGT...TAAAGACCAAAAAGGTATCCTTGTGCAATCTATATCCTTATCCATGGGAAAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000234131.2
CDS GCA 90 bp ATGCCATCTTCTGAAACATCTGAAGAGACTCTGACATTGCTAAGATaGACAAGGAAGTTTTCATCTTCTTCAAAGATATCATCATCAATG +
Preference number: 5 (lower is better)
Translates to: MPSSETSEETLTLLR*TRKFSSSSKISSSM
Trigger: CATTGATGATGATATCTTTGAAGAAGATGAAAACTTCCTTGTGCATCTTAGCAATGTCAGAGTCTCTTCAGATGTTTCAGAAGATGGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS TCA 72 bp TGTACAAGAGCCACAGGAGCACAAACAGGGAAGATGTaGGGAGCTTGGCAGTCCGGGGCCCTCCCAGCTCAC +
Preference number: 6 (lower is better)
Translates to: CTRATGAQTGKM*GAWQSGALPAH
Trigger: GTGAGCTGGGAGGGCCCCGGACTGCCAAGCTCCTCACATCTTCCCTGTTTGTGCTCCTGTGGCTCTTGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
CDS GCA 72 bp TCTTCCCCAGCGCTGACAGTGATGGCTTCGATAAACTaGTCTCTCCAGCTGTTGGTCCCCACCACAAGGGCC +
Preference number: 6 (lower is better)
Translates to: SSPALTVMASIN*SLQLLVPTTRA
Trigger: GGCCCTTGTGGTGGGGACCAACAGCTGGAGAGAGCAGTTTATCGAAGCCATCACTGTCAGCGCTGGGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS CAA 90 bp AGGATGGGGCGCCCCATTTCCGCAATGCGCCTCTCCTCCTCTTCTTaGCTGGTCAGTGGCTGCTTGTCATCATATTCCTCTGAGATGGTG +
Preference number: 6 (lower is better)
Translates to: RMGRPISAMRLSSSS*LVSGCLSSYSSEMV
Trigger: CACCATCTCAGAGGAATATGATGACAAGCAGCCACTGACCAGCAAAGAAGAGGAGGAGAGGCGCATTGCGGAAATGGGGCGCCCCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS TCA 72 bp CAGTTTTGGAAGCTGGTCTGTCTCCTTCATGTTCAATaGTCATCCCCCTCTGCTTGCCGGCCCTGTACCGCT +
Preference number: 6 (lower is better)
Translates to: QFWKLVCLLHVQ*SSPSACRPCTA
Trigger: AGCGGTACAGGGCCGGCAAGCAGAGGGGGATGATCATTGAACATGAAGGAGACAGACCAGCTTCCAAAACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS TCA 72 bp AATCAGACCCAGCATTGGCTGTGCCGTCTTCTGTCCTaGAGTCAACAAACACAGTGGTGCTCAAGTCGCCCC +
Preference number: 6 (lower is better)
Translates to: NQTQHWLCRLLS*SQQTQWCSSRP
Trigger: GGGGCGACTTGAGCACCACTGTGTTTGTTGACTTCAGGACAGAAGACGGCACAGCCAATGCTGGGTCTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS CCA 72 bp GTCCTGGGTAGCTGCTACTTTGCTGGCAAATGTGTCTaGCACCGAGGTTCCAAGAGCAACAAACACAACGGC +
Preference number: 6 (lower is better)
Translates to: VLGSCYFAGKCV*HRGSKSNKHNG
Trigger: GCCGTTGTGTTTGTTGCTCTTGGAACCTCGGTGCCAGACACATTTGCCAGCAAAGTAGCAGCTACCCAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS CAA 72 bp GACGCATCTGCATACTGGTCCTGGGTAGCTGCTACTTaGCTGGCAAATGTGTCTGGCACCGAGGTTCCAAGA +
Preference number: 6 (lower is better)
Translates to: DASAYWSWVAAT*LANVSGTEVPR
Trigger: TCTTGGAACCTCGGTGCCAGACACATTTGCCAGCAAAGTAGCAGCTACCCAGGACCAGTATGCAGATGCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS CAA 90 bp CCAGCGCTGACAGTGATGGCTTCGATAAACTGCTCTCTCCAGCTGTaGGTCCCCACCACAAGGGCCAGGTTCGTCTTCTTAATGAGTTTG +
Preference number: 6 (lower is better)
Translates to: PALTVMASINCSLQL*VPTTRARFVFLMSL
Trigger: CAAACTCATTAAGAAGACGAACCTGGCCCTTGTGGTGGGGACCAACAGCTGGAGAGAGCAGTTTATCGAAGCCATCACTGTCAGCGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS CAA 72 bp ACAGTGATGGCTTCGATAAACTGCTCTCTCCAGCTGTaGGTCCCCACCACAAGGGCCAGGTTCGTCTTCTTA +
Preference number: 6 (lower is better)
Translates to: TVMASINCSLQL*VPTTRARFVFL
Trigger: TAAGAAGACGAACCTGGCCCTTGTGGTGGGGACCAACAGCTGGAGAGAGCAGTTTATCGAAGCCATCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS CAA 90 bp TTGCCTATAGACGCATCTGCATACTGGTCCTGGGTAGCTGCTACTTaGCTGGCAAATGTGTCTGGCACCGAGGTTCCAAGAGCAACAAAC +
Preference number: 6 (lower is better)
Translates to: LPIDASAYWSWVAAT*LANVSGTEVPRATN
Trigger: GTTTGTTGCTCTTGGAACCTCGGTGCCAGACACATTTGCCAGCAAAGTAGCAGCTACCCAGGACCAGTATGCAGATGCGTCTATAGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS CAA 90 bp AGCCATTTCCATGTTGACTTCATGCATACTGACAGCCTTCCTTGCTaGATCAGCTGCGTGCCTCTTCAAGATGTTGCCAGCTCCGGTCAT +
Preference number: 6 (lower is better)
Translates to: SHFHVDFMHTDSLPC*ISCVPLQDVASSGH
Trigger: ATGACCGGAGCTGGCAACATCTTGAAGAGGCACGCAGCTGATCAAGCAAGGAAGGCTGTCAGTATGCATGAAGTCAACATGGAAATGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS TCA 72 bp TCCAGGCTGCTGTCACAAAGAACACACGCAGATGCTTaGTCTTCCTTGTCTCTCCATCAGGGACCACGTAAA +
Preference number: 6 (lower is better)
Translates to: SRLLSQRTHADA*SSLSLHQGPRK
Trigger: TTTACGTGGTCCCTGATGGAGAGACAAGGAAGATCAAGCATCTGCGTGTGTTCTTTGTGACAGCAGCCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS CAA 72 bp CATGTTGACTTCATGCATACTGACAGCCTTCCTTGCTaGATCAGCTGCGTGCCTCTTCAAGATGTTGCCAGC +
Preference number: 6 (lower is better)
Translates to: HVDFMHTDSLPC*ISCVPLQDVAS
Trigger: GCTGGCAACATCTTGAAGAGGCACGCAGCTGATCAAGCAAGGAAGGCTGTCAGTATGCATGAAGTCAACATG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS TCA 72 bp ATGTTGACTTCATGCATACTGACAGCCTTCCTTGCTTaGTCAGCTGCGTGCCTCTTCAAGATGTTGCCAGCT +
Preference number: 6 (lower is better)
Translates to: MLTSCILTAFLA*SAACLFKMLPA
Trigger: AGCTGGCAACATCTTGAAGAGGCACGCAGCTGATCAAGCAAGGAAGGCTGTCAGTATGCATGAAGTCAACAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS GCA 72 bp CTTGTAGACATACTTGTAAAAGAGAAGCCGCCTGTCTaGTACCCACGCGAACACAACGCAGATGGGAAAGAA +
Preference number: 6 (lower is better)
Translates to: LVDILVKEKPPV*YPREHNADGKE
Trigger: TTCTTTCCCATCTGCGTTGTGTTCGCGTGGGTAGCAGACAGGCGGCTTCTCTTTTACAAGTATGTCTACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS GCA 72 bp TTCCATGTTGACTTCATGCATACTGACAGCCTTCCTTaGTTGATCAGCTGCGTGCCTCTTCAAGATGTTGCC +
Preference number: 6 (lower is better)
Translates to: FHVDFMHTDSLP*LISCVPLQDVA
Trigger: GGCAACATCTTGAAGAGGCACGCAGCTGATCAAGCAAGGAAGGCTGTCAGTATGCATGAAGTCAACATGGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS GCA 72 bp ATGCGCCTCTCCTCCTCTTCTTTGCTGGTCAGTGGCTaGTTGTCATCATATTCCTCTGAGATGGTGATTACA +
Preference number: 6 (lower is better)
Translates to: MRLSSSSLLVSG*LSSYSSEMVIT
Trigger: TGTAATCACCATCTCAGAGGAATATGATGACAAGCAGCCACTGACCAGCAAAGAAGAGGAGGAGAGGCGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS CAA 90 bp AAGGTCAGGTTCGACACAGTCTCGTTCCAGATTCTCACCGTCGTCTaGGTGGTCTCTCCATTCGGTTTCTTTATCGTTATTTCTTTCTCT +
Preference number: 6 (lower is better)
Translates to: KVRFDTVSFQILTVV*VVSPFGFFIVISFS
Trigger: AGAGAAAGAAATAACGATAAAGAAACCGAATGGAGAGACCACCAAGACGACGGTGAGAATCTGGAACGAGACTGTGTCGAACCTGACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS CCA 72 bp TCGACACAGTCTCGTTCCAGATTCTCACCGTCGTCTTaGTGGTCTCTCCATTCGGTTTCTTTATCGTTATTT +
Preference number: 6 (lower is better)
Translates to: STQSRSRFSPSS*WSLHSVSLSLF
Trigger: AAATAACGATAAAGAAACCGAATGGAGAGACCACCAAGACGACGGTGAGAATCTGGAACGAGACTGTGTCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS CCA 72 bp CATGGTCATCATCAAAAATGGTTATGGTGGCAGTGCTaGGTGACCCAAGACAAGCAATTGAAGAAGCGTGAT +
Preference number: 6 (lower is better)
Translates to: HGHHQKWLWWQC*VTQDKQLKKRD
Trigger: ATCACGCTTCTTCAATTGCTTGTCTTGGGTCACCCAGCACTGCCACCATAACCATTTTTGATGATGACCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS CAA 72 bp TTCGACACAGTCTCGTTCCAGATTCTCACCGTCGTCTaGGTGGTCTCTCCATTCGGTTTCTTTATCGTTATT +
Preference number: 6 (lower is better)
Translates to: FDTVSFQILTVV*VVSPFGFFIVI
Trigger: AATAACGATAAAGAAACCGAATGGAGAGACCACCAAGACGACGGTGAGAATCTGGAACGAGACTGTGTCGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS TCA 72 bp GTGCTGGGTGACCCAAGACAAGCAATTGAAGAAGCGTaGTTGGATTCTAGTATGCCATCTTCTGAAACATCT +
Preference number: 6 (lower is better)
Translates to: VLGDPRQAIEEA*LDSSMPSSETS
Trigger: AGATGTTTCAGAAGATGGCATACTAGAATCCAATCACGCTTCTTCAATTGCTTGTCTTGGGTCACCCAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS CCA 72 bp ACACAGTCTCGTTCCAGATTCTCACCGTCGTCTTGGTaGTCTCTCCATTCGGTTTCTTTATCGTTATTTCTT +
Preference number: 6 (lower is better)
Translates to: TQSRSRFSPSSW*SLHSVSLSLFL
Trigger: AAGAAATAACGATAAAGAAACCGAATGGAGAGACCACCAAGACGACGGTGAGAATCTGGAACGAGACTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS CCA 72 bp CACTTTCCCATCCATTTCGATTTCAGTTTTGGAAGCTaGTCTGTCTCCTTCATGTTCAATGATCATCCCCCT +
Preference number: 6 (lower is better)
Translates to: HFPIHFDFSFGS*SVSFMFNDHPP
Trigger: AGGGGGATGATCATTGAACATGAAGGAGACAGACCAGCTTCCAAAACTGAAATCGAAATGGATGGGAAAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS CAA 90 bp CAAAAATGGTTATGGTGGCAGTGCTGGGTGACCCAAGACAAGCAATaGAAGAAGCGTGATTGGATTCTAGTATGCCATCTTCTGAAACAT +
Preference number: 6 (lower is better)
Translates to: QKWLWWQCWVTQDKQ*KKRDWILVCHLLKH
Trigger: ATGTTTCAGAAGATGGCATACTAGAATCCAATCACGCTTCTTCAATTGCTTGTCTTGGGTCACCCAGCACTGCCACCATAACCATTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS TCA 72 bp CCAAATGGGCAAGATCACCCCTTTCTTACAGTAATATaGGCCAGTACATTCAGTGGTTTCATTTCCTCCTGT +
Preference number: 6 (lower is better)
Translates to: PNGQDHPFLTVI*ASTFSGFISSC
Trigger: ACAGGAGGAAATGAAACCACTGAATGTACTGGCTCATATTACTGTAAGAAAGGGGTGATCTTGCCCATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS TCA 72 bp CCAGAGCCCCATCTAAGAAATTGTCAACATGAGAGTTaGCCACTTTCCCATCCATTTCGATTTCAGTTTTGG +
Preference number: 6 (lower is better)
Translates to: PEPHLRNCQHES*PLSHPFRFQFW
Trigger: CCAAAACTGAAATCGAAATGGATGGGAAAGTGGTCAACTCTCATGTTGACAATTTCTTAGATGGGGCTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS CCA 72 bp TGGGTGACCCAAGACAAGCAATTGAAGAAGCGTGATTaGATTCTAGTATGCCATCTTCTGAAACATCTGAAG +
Preference number: 6 (lower is better)
Translates to: WVTQDKQLKKRD*ILVCHLLKHLK
Trigger: CTTCAGATGTTTCAGAAGATGGCATACTAGAATCCAATCACGCTTCTTCAATTGCTTGTCTTGGGTCACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS CAA 72 bp GAGTTGACCACTTTCCCATCCATTTCGATTTCAGTTTaGGAAGCTGGTCTGTCTCCTTCATGTTCAATGATC +
Preference number: 6 (lower is better)
Translates to: ELTTFPSISISV*EAGLSPSCSMI
Trigger: GATCATTGAACATGAAGGAGACAGACCAGCTTCCAAAACTGAAATCGAAATGGATGGGAAAGTGGTCAACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS TCA 72 bp TCCAAAACCAGAGCCCCATCTAAGAAATTGTCAACATaGGAGTTGACCACTTTCCCATCCATTTCGATTTCA +
Preference number: 6 (lower is better)
Translates to: SKTRAPSKKLST*ELTTFPSISIS
Trigger: TGAAATCGAAATGGATGGGAAAGTGGTCAACTCTCATGTTGACAATTTCTTAGATGGGGCTCTGGTTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS CCA 72 bp ACCTTGACTGATATTGTTTTGACTATTTCATCGTTCTaGAATTCGAGCTCTCCACAGGTGTCCTCAAAGTCT +
Preference number: 6 (lower is better)
Translates to: TLTDIVLTISSF*NSSSPQVSSKS
Trigger: AGACTTTGAGGACACCTGTGGAGAGCTCGAATTCCAGAACGATGAAATAGTCAAAACAATATCAGTCAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000235015.2
CDS CCA 72 bp CTCGGCTTTTCTGCTGTTGACTTAGGACCTGGTAGTTaGCTAATTCTATTAATTGCTCAATTTCTTTCTCAG +
Preference number: 6 (lower is better)
Translates to: LGFSAVDLGPGS*LILLIAQFLSQ
Trigger: CTGAGAAAGAAATTGAGCAATTAATAGAATTAGCCAACTACCAGGTCCTAAGTCAACAGCAGAAAAGCCGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS CAA 90 bp GATTCTAGTATGCCATCTTCTGAAACATCTGAAGAGACTCTGACATaGCTAAGATGCACAAGGAAGTTTTCATCTTCTTCAAAGATATCA +
Preference number: 6 (lower is better)
Translates to: DSSMPSSETSEETLT*LRCTRKFSSSSKIS
Trigger: TGATATCTTTGAAGAAGATGAAAACTTCCTTGTGCATCTTAGCAATGTCAGAGTCTCTTCAGATGTTTCAGAAGATGGCATACTAGAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2
CDS GCA 72 bp TCTGAAACATCTGAAGAGACTCTGACATTGCTAAGATaGACAAGGAAGTTTTCATCTTCTTCAAAGATATCA +
Preference number: 6 (lower is better)
Translates to: SETSEETLTLLR*TRKFSSSSKIS
Trigger: TGATATCTTTGAAGAAGATGAAAACTTCCTTGTGCATCTTAGCAATGTCAGAGTCTCTTCAGATGTTTCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000086538.10
ENSMUST00000163123.3
ENSMUST00000163680.9
ENSMUST00000234131.2
ENSMUST00000234923.2
ENSMUST00000235015.2