RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC7A9 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030492

Ensembl transcript IDs: ENSMUST00000032703.10, ENSMUST00000118383.8, ENSMUST00000118969.8, ENSMUST00000141245.2

Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTTGAGTTGGTTCCAACCATCGTAGGCCCAGAGTCCATTGTAAAATaGCAGACTGATGGCACCCACAGAGGTCTGTGTACCCTCAAAAGA +
Preference number: 1 (lower is better)
Translates to: VELVPTIVGPESIVK*QTDGTHRGLCTLKR
Trigger: TCTTTTGAGGGTACACAGACCTCTGTGGGTGCCATCAGTCTGGCATTTTACAATGGACTCTGGGCCTACGATGGTTGGAACCAACTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141245.2
3UTR TCA 90 bp GGTTCCAACCATCGTAGGCCCAGAGTCCATTGTAAAATGCCAGACTaGTGGCACCCACAGAGGTCTGTGTACCCTCAAAAGAATTCTGAA +
Preference number: 1 (lower is better)
Translates to: GSNHRRPRVHCKMPD*WHPQRSVYPQKNSE
Trigger: TTCAGAATTCTTTTGAGGGTACACAGACCTCTGTGGGTGCCATCAGTCTGGCATTTTACAATGGACTCTGGGCCTACGATGGTTGGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141245.2
3UTR-3UTR TCA 90 bp ATTGTAAAATGCCAGACTGATGGCACCCACAGAGGTCTGTGTACCCTCAAAAGAAGGATGAGGGCTTCATaGCGATCAGGCTGGTCCAGG +
Preference number: 2 (lower is better)
Translates to: IVKCQTDGTHRGLCTLKRRMRAS*RSGWSR
Trigger: CCTGGACCAGCCTGATCGTCATGAAGCCCTCATCCT...TCTTTTGAGGGTACACAGACCTCTGTGGGTGCCATCAGTCTGGCATTTTACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141245.2
3UTR-3UTR TCA 90 bp ATTGTAAAATGCCAGACTGATGGCACCCACAGAGGTCTGTGTACCCTCAAAAGAGATGATGGCGAAGGATaGGGGCTTCATGACGATCAG +
Preference number: 2 (lower is better)
Translates to: IVKCQTDGTHRGLCTLKRDDGEG*GLHDDQ
Trigger: CTGATCGTCATGAAGCCCTCATCCTTCGCCATCATC...TCTTTTGAGGGTACACAGACCTCTGTGGGTGCCATCAGTCTGGCATTTTACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000141245.2
3UTR-3UTR GCA 90 bp CCTCAAAAGAATTCTGAAAGTTCTTTACATTTCCTTGGGCCAGGAAGACCAGTCCATTCTGGACATAGCTaGCAAGCCGCACGCTTAGCG +
Preference number: 2 (lower is better)
Translates to: PQKNSESSLHFLGPGRPVHSGHS*QAARLA
Trigger: CGCTAAGCGTGCGGCTTGGCAGCTATGTCCAGAATG...GACTGGTCTTCCTGGCCCAAGGAAATGTAAAGAACTTTCAGAATTCTTTTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141245.2
3UTR CAA 90 bp GGTCTGTGTACCCTCAAAAGAATTCTGAAAGTTCTTTACATTTCCTaGGGCCAGGAAGACCAGTCCGCTGATGATGATGATGGCCACGAT +
Preference number: 2 (lower is better)
Translates to: GLCTLKRILKVLYIS*GQEDQSADDDDGHD
Trigger: ATCGTGGCCATCATCATCATCAGCGGACTGGTCTTCCTGGCCCAAGGAAATGTAAAGAACTTTCAGAATTCTTTTGAGGGTACACAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141245.2
3UTR-3UTR TCA 90 bp CAGAGGTCTGTGTACCCTCAAAAGAATTCTGAAAGTTCTTTACATTTCCTTGGGCCATCTTGGCTGCCGTaGAGACATTCTGGACATAGC +
Preference number: 2 (lower is better)
Translates to: QRSVYPQKNSESSLHFLGPSWLP*RHSGHS
Trigger: GCTATGTCCAGAATGTCTTCACGGCAGCCAAGATGG...CCCAAGGAAATGTAAAGAACTTTCAGAATTCTTTTGAGGGTACACAGACCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141245.2
3UTR GCA 72 bp GCTGATGATGATGATGGCCACGATCACCATCTTGGCTaGCGTGAAGACATTCTGGACATAGCTGCCAAGCCG +
Preference number: 3 (lower is better)
Translates to: ADDDDGHDHHLG*REDILDIAAKP
Trigger: CGGCTTGGCAGCTATGTCCAGAATGTCTTCACGGCAGCCAAGATGGTGATCGTGGCCATCATCATCATCAGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141245.2
3UTR GCA 72 bp CAGCAGCCAGGAGTTTCACTACCACAGCAGGAGGCTTaGAACCTGAGTAAAAGGCTGCACACACATACTCTG +
Preference number: 3 (lower is better)
Translates to: QQPGVSLPQQEA*NLSKRLHTHTL
Trigger: CAGAGTATGTGTGTGCAGCCTTTTACTCAGGTTGCAAGCCTCCTGCTGTGGTAGTGAAACTCCTGGCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141245.2
3UTR GCA 72 bp GTTCCAACCATCGTAGGCCCAGAGTCCATTGTAAAATaGCAGACTGATGGCACCCACAGAGGTCTGTGTACC +
Preference number: 3 (lower is better)
Translates to: VPTIVGPESIVK*QTDGTHRGLCT
Trigger: GGTACACAGACCTCTGTGGGTGCCATCAGTCTGGCATTTTACAATGGACTCTGGGCCTACGATGGTTGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141245.2
3UTR-3UTR CAA 90 bp TGCCAGACTGATGGCACCCACAGAGGTCTGTGTACCCTCAAAAGAATTCTGAAAGCCACGATCACCATCTaGGCTGCCGTGAAGACATTC +
Preference number: 3 (lower is better)
Translates to: CQTDGTHRGLCTLKRILKATITI*AAVKTF
Trigger: GAATGTCTTCACGGCAGCCAAGATGGTGATCGTGGC...TTTCAGAATTCTTTTGAGGGTACACAGACCTCTGTGGGTGCCATCAGTCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141245.2
3UTR TCA 72 bp GCACCCACAGAGGTCTGTGTACCCTCAAAAGAATTCTaGAAGTTCTTTACATTTCCTTGGGCCAGGAAGACC +
Preference number: 3 (lower is better)
Translates to: APTEVCVPSKEF*KFFTFPWARKT
Trigger: GGTCTTCCTGGCCCAAGGAAATGTAAAGAACTTTCAGAATTCTTTTGAGGGTACACAGACCTCTGTGGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141245.2
CDS-3UTR GCA 90 bp ACGCTTAGCGCATTCACTGTCGTGATAAACAAGATGGCAGCAGCAGCCAGGAGTCATTGTGCCAAGCTCTaGAAAGCACAGGGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: TLSAFTVVINKMAAAARSHCAKL*KAQGAS
Trigger: AGAGGCGCCCTGTGCTTTGCAGAGCTTGGCACAATG...ACTCCTGGCTGCTGCTGCCATCTTGTTTATCACGACAGTGAATGCGCTAAGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141245.2
CDS-3UTR CCA 90 bp CCTCAAAAGAATTCTGAAAGTTCTTTACATTTCCTTGGGCCAGGAAGACCAGTCCAGGGCGCCTCTTTCTaGAGACTTGTGGTCTTGAGT +
Preference number: 4 (lower is better)
Translates to: PQKNSESSLHFLGPGRPVQGASF*RLVVLS
Trigger: ACTCAAGACCACAAGTCTCCAGAAAGAGGCGCCCTG...GACTGGTCTTCCTGGCCCAAGGAAATGTAAAGAACTTTCAGAATTCTTTTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141245.2
CDS CCA 90 bp AGACCCACCTCTTTCTGGAGACTTGTGGTCTTGAGTTCAGTACTGTaGGTGGATTTCTCATCCTCTCTCCGTCTCCTCAGGCTTGTCTCC +
Preference number: 5 (lower is better)
Translates to: RPTSFWRLVVLSSVL*VDFSSSLRLLRLVS
Trigger: GGAGACAAGCCTGAGGAGACGGAGAGAGGATGAGAAATCCACCCACAGTACTGAACTCAAGACCACAAGTCTCCAGAAAGAGGTGGGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032703.10
ENSMUST00000118383.8
ENSMUST00000118969.8
CDS-3UTR CAA 90 bp GTGATAAACAAGATGGCAGCAGCAGCCAGGAGTTTCACTACCACAGCAGGAGGCTGGAGACTTGTGGTCTaGAGTTCAGTACTGTGGGTG +
Preference number: 5 (lower is better)
Translates to: VINKMAAAARSFTTTAGGWRLVV*SSVLWV
Trigger: CACCCACAGTACTGAACTCAAGACCACAAGTCTCCA...GCCTCCTGCTGTGGTAGTGAAACTCCTGGCTGCTGCTGCCATCTTGTTTATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141245.2
CDS TCA 90 bp GAGCCTGCCGGCTGTAAAGCAGGTACCATTAGCAGCACCGATGGTTaGAAATGCCACAAAAAGTGGGACTACCCAAGATGCTGGATAGAG +
Preference number: 5 (lower is better)
Translates to: EPAGCKAGTISSTDG*KCHKKWDYPRCWIE
Trigger: CTCTATCCAGCATCTTGGGTAGTCCCACTTTTTGTGGCATTTTCAACCATCGGTGCTGCTAATGGTACCTGCTTTACAGCCGGCAGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032703.10
ENSMUST00000118383.8
ENSMUST00000118969.8
CDS CCA 90 bp GTGCCCACAATGATACAGATGCCACTGAGAAGACCCACCTCTTTCTaGAGACTTGTGGTCTTGAGTTCAGTACTGTGGGTGGATTTCTCA +
Preference number: 5 (lower is better)
Translates to: VPTMIQMPLRRPTSF*RLVVLSSVLWVDFS
Trigger: TGAGAAATCCACCCACAGTACTGAACTCAAGACCACAAGTCTCCAGAAAGAGGTGGGTCTTCTCAGTGGCATCTGTATCATTGTGGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032703.10
ENSMUST00000118383.8
ENSMUST00000118969.8
CDS CCA 90 bp GAACAACACACAGTAGAGATACTCCCAGGCCGGCTCACTGATGATTaGAGCCAGGATCAAGAAAAGAGATACGAGAATCACAATGATAGG +
Preference number: 5 (lower is better)
Translates to: EQHTVEILPGRLTDD*SQDQEKRYENHNDR
Trigger: CCTATCATTGTGATTCTCGTATCTCTTTTCTTGATCCTGGCTCCAATCATCAGTGAGCCGGCCTGGGAGTATCTCTACTGTGTGTTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032703.10
ENSMUST00000118383.8
ENSMUST00000118969.8
CDS CCA 90 bp GATGTAAATGATGGCTATTATACCATAAAATATGAGGGCAGGGGCTaGCGTGAGGCGCTTGACACTGATGTAGGAGAGCACTTTAAGCAT +
Preference number: 5 (lower is better)
Translates to: DVNDGYYTIKYEGRG*REALDTDVGEHFKH
Trigger: ATGCTTAAAGTGCTCTCCTACATCAGTGTCAAGCGCCTCACGCCAGCCCCTGCCCTCATATTTTATGGTATAATAGCCATCATTTACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032703.10
ENSMUST00000118383.8
ENSMUST00000118969.8
CDS GCA 72 bp TTTTCTGGTGGGACGACTTCCATGAGCATCTGCAGGTaGTTTGTGACCGGCCTGGAGATTCTCTGGGCCCAT +
Preference number: 6 (lower is better)
Translates to: FSGGTTSMSICR*FVTGLEILWAH
Trigger: ATGGGCCCAGAGAATCTCCAGGCCGGTCACAAAGCACCTGCAGATGCTCATGGAAGTCGTCCCACCAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032703.10
ENSMUST00000118383.8
ENSMUST00000118969.8
CDS TCA 72 bp GCCAAAGGCCTCCATCAGATAGGGGTACTCACCCCCTaGCTTGGTAATCATTGTGCCAAGCTCTGCAAAGCA +
Preference number: 6 (lower is better)
Translates to: AKGLHQIGVLTP*LGNHCAKLCKA
Trigger: TGCTTTGCAGAGCTTGGCACAATGATTACCAAGTCAGGGGGTGAGTACCCCTATCTGATGGAGGCCTTTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032703.10
ENSMUST00000118383.8
ENSMUST00000118969.8
CDS CAA 90 bp CAGATGCCACTGAGAAGACCCACCTCTTTCTGGAGACTTGTGGTCTaGAGTTCAGTACTGTGGGTGGATTTCTCATCCTCTCTCCGTCTC +
Preference number: 6 (lower is better)
Translates to: QMPLRRPTSFWRLVV*SSVLWVDFSSSLRL
Trigger: GAGACGGAGAGAGGATGAGAAATCCACCCACAGTACTGAACTCAAGACCACAAGTCTCCAGAAAGAGGTGGGTCTTCTCAGTGGCATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032703.10
ENSMUST00000118383.8
ENSMUST00000118969.8
CDS CCA 72 bp GATGGCTATTATACCATAAAATATGAGGGCAGGGGCTaGCGTGAGGCGCTTGACACTGATGTAGGAGAGCAC +
Preference number: 6 (lower is better)
Translates to: DGYYTIKYEGRG*REALDTDVGEH
Trigger: GTGCTCTCCTACATCAGTGTCAAGCGCCTCACGCCAGCCCCTGCCCTCATATTTTATGGTATAATAGCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032703.10
ENSMUST00000118383.8
ENSMUST00000118969.8
CDS CCA 72 bp TCTTTCTGGAGACTTGTGGTCTTGAGTTCAGTACTGTaGGTGGATTTCTCATCCTCTCTCCGTCTCCTCAGG +
Preference number: 6 (lower is better)
Translates to: SFWRLVVLSSVL*VDFSSSLRLLR
Trigger: CCTGAGGAGACGGAGAGAGGATGAGAAATCCACCCACAGTACTGAACTCAAGACCACAAGTCTCCAGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032703.10
ENSMUST00000118383.8
ENSMUST00000118969.8
CDS TCA 72 bp GGCTGTAAAGCAGGTACCATTAGCAGCACCGATGGTTaGAAATGCCACAAAAAGTGGGACTACCCAAGATGC +
Preference number: 6 (lower is better)
Translates to: GCKAGTISSTDG*KCHKKWDYPRC
Trigger: GCATCTTGGGTAGTCCCACTTTTTGTGGCATTTTCAACCATCGGTGCTGCTAATGGTACCTGCTTTACAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032703.10
ENSMUST00000118383.8
ENSMUST00000118969.8
CDS CCA 72 bp ATGATACAGATGCCACTGAGAAGACCCACCTCTTTCTaGAGACTTGTGGTCTTGAGTTCAGTACTGTGGGTG +
Preference number: 6 (lower is better)
Translates to: MIQMPLRRPTSF*RLVVLSSVLWV
Trigger: CACCCACAGTACTGAACTCAAGACCACAAGTCTCCAGAAAGAGGTGGGTCTTCTCAGTGGCATCTGTATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032703.10
ENSMUST00000118383.8
ENSMUST00000118969.8
CDS CCA 72 bp ACAGTAGAGATACTCCCAGGCCGGCTCACTGATGATTaGAGCCAGGATCAAGAAAAGAGATACGAGAATCAC +
Preference number: 6 (lower is better)
Translates to: TVEILPGRLTDD*SQDQEKRYENH
Trigger: GTGATTCTCGTATCTCTTTTCTTGATCCTGGCTCCAATCATCAGTGAGCCGGCCTGGGAGTATCTCTACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032703.10
ENSMUST00000118383.8
ENSMUST00000118969.8
CDS CAA 72 bp CTGAGAAGACCCACCTCTTTCTGGAGACTTGTGGTCTaGAGTTCAGTACTGTGGGTGGATTTCTCATCCTCT +
Preference number: 6 (lower is better)
Translates to: LRRPTSFWRLVV*SSVLWVDFSSS
Trigger: AGAGGATGAGAAATCCACCCACAGTACTGAACTCAAGACCACAAGTCTCCAGAAAGAGGTGGGTCTTCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032703.10
ENSMUST00000118383.8
ENSMUST00000118969.8
CDS CAA 90 bp AAAAGAGATACGAGAATCACAATGATAGGGATGAAGAGGGGCACCTaGATGGGCCTCTCTAGATCTTTCCTTGTGAATCGCATCACAACG +
Preference number: 6 (lower is better)
Translates to: KRDTRITMIGMKRGT*MGLSRSFLVNRITT
Trigger: CGTTGTGATGCGATTCACAAGGAAAGATCTAGAGAGGCCCATCAAGGTGCCCCTCTTCATCCCTATCATTGTGATTCTCGTATCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032703.10
ENSMUST00000118383.8
ENSMUST00000118969.8