Pregenerated sensors for SLC7A8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022180Ensembl transcript IDs: ENSMUST00000022787.8
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACCTGCTGGCAGGGGCCAGGGAAAGGTCCCTGCATATTCCAGTTTaGGTAGATGGACCGGGGTTAGGGTTCTGCCTTGTGATCAAAGGA | + |
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Preference number: 1 (lower is better) Translates to: DLLAGARERSLHIPV*VDGPGLGFCLVIKG Trigger: TCCTTTGATCACAAGGCAGAACCCTAACCCCGGTCCATCTACTCAAACTGGAATATGCAGGGACCTTTCCCTGGCCCCTGCCAGCAGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR CCA 90 bp | GGCAGGGGCCAGGGAAAGGTCCCTGCATATTCCAGTTTGAGTAGATaGACCGGGGTTAGGGTTCTGCCTTGTGATCAAAGGATCCTGTCC | + |
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Preference number: 1 (lower is better) Translates to: GRGQGKVPAYSSLSR*TGVRVLPCDQRILS Trigger: GGACAGGATCCTTTGATCACAAGGCAGAACCCTAACCCCGGTCCATCTACTCAAACTGGAATATGCAGGGACCTTTCCCTGGCCCCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR CCA 90 bp | TTTGATGCTAATTCAGGCCTGAAGGACTTGGAGATCCTTCATACCTaGTCCTTGAGCCGTGGTCCAGGAGAGGAAAGGGGTGAGGGTGGT | + |
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Preference number: 1 (lower is better) Translates to: FDANSGLKDLEILHT*SLSRGPGEERGEGG Trigger: ACCACCCTCACCCCTTTCCTCTCCTGGACCACGGCTCAAGGACCAGGTATGAAGGATCTCCAAGTCCTTCAGGCCTGAATTAGCATCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR CCA 90 bp | GAAGCACCCTTCCTTCCAGGGAAGGACTTAATATCAGGTCTGTCCTaGAGGTTGGAAACTGGGAGCACTTTAGGCCCAGTTCTTGGATGG | + |
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Preference number: 1 (lower is better) Translates to: EAPFLPGKDLISGLS*RLETGSTLGPVLGW Trigger: CCATCCAAGAACTGGGCCTAAAGTGCTCCCAGTTTCCAACCTCCAGGACAGACCTGATATTAAGTCCTTCCCTGGAAGGAAGGGTGCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR CCA 90 bp | TTGACCTTGACCATGGGCCTCGGTCCTGGAAGCAGGTTGGTTCTTTaGGTACAAAGGTCAGGGTCTTTGTTTAGAATGTCTCACTGTGGA | + |
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Preference number: 1 (lower is better) Translates to: LTLTMGLGPGSRLVL*VQRSGSLFRMSHCG Trigger: TCCACAGTGAGACATTCTAAACAAAGACCCTGACCTTTGTACCCAAAGAACCAACCTGCTTCCAGGACCGAGGCCCATGGTCAAGGTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR GCA 90 bp | TTGGTAGTACAGAGTGGAGAAGAAGGCAAAGAGAAGTGTACCCTCTaGCTTTTGGTTCCCTGGAGAATGAAGCCACATCTGAGTCTCTCC | + |
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Preference number: 1 (lower is better) Translates to: LVVQSGEEGKEKCTL*LLVPWRMKPHLSLS Trigger: GGAGAGACTCAGATGTGGCTTCATTCTCCAGGGAACCAAAAGGCAGAGGGTACACTTCTCTTTGCCTTCTTCTCCACTCTGTACTACCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR-3UTR TCA 90 bp | TGCCATTCTGTCCTCTTGTCCCAGGTGGGATGGCAGAACGGTGGTAGGGTTGTTCCCCAGGGTGAGGGCTaGGCACTGCTGGGAAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: CHSVLLSQVGWQNGGRVVPQGEG*ALLGRG Trigger: CCCCCTTCCCAGCAGTGCTCAGCCCTCACCCTGGGG...AACAACCCTACCACCGTTCTGCCATCCCACCTGGGACAAGAGGACAGAATGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR-3UTR TCA 90 bp | GATCCTGTCCTAAGCACAGCAGGTGTGGAGGCTGCCAGGAGAAGGCAGACACTGATGGTCTCCCCAGGGTaGGGGCTGAGCACTGCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: DPVLSTAGVEAARRRQTLMVSPG*GLSTAG Trigger: CCCAGCAGTGCTCAGCCCTCACCCTGGGGAGACCAT...CAGTGTCTGCCTTCTCCTGGCAGCCTCCACACCTGCTGTGCTTAGGACAGGATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR-3UTR TCA 90 bp | GATCCTGTCCTAAGCACAGCAGGTGTGGAGGCTGCCAGGAGAAGGCAGACACTGGGGGTGGAGGCTTCCTaGAAGGGAACTCTCTGGGTA | + |
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Preference number: 2 (lower is better) Translates to: DPVLSTAGVEAARRRQTLGVEAS*KGTLWV Trigger: TACCCAGAGAGTTCCCTTTCAGGAAGCCTCCACCCC...CAGTGTCTGCCTTCTCCTGGCAGCCTCCACACCTGCTGTGCTTAGGACAGGATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR-3UTR GCA 90 bp | GGCCAGGGAAAGGTCCCTGCATATTCCAGTTTGAGTAGATGGACCGGGGTTAGGGTGAGGGCTGAGCACTaGTGGGAAGGGGGAAGCACC | + |
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Preference number: 2 (lower is better) Translates to: GQGKVPAYSSLSRWTGVRVRAEH*WEGGST Trigger: GGTGCTTCCCCCTTCCCAGCAGTGCTCAGCCCTCAC...CCTAACCCCGGTCCATCTACTCAAACTGGAATATGCAGGGACCTTTCCCTGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR CAA 90 bp | CTCCACTCTCCTCCAAACCTTAGGGTGTGTGCAGGCCCTGGTGCATaGACCTTGACCATGGGCCTCGGTCCTGGAAGCAGGTTGGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: LHSPPNLRVCAGPGA*TLTMGLGPGSRLVL Trigger: AAGAACCAACCTGCTTCCAGGACCGAGGCCCATGGTCAAGGTCAATGCACCAGGGCCTGCACACACCCTAAGGTTTGGAGGAGAGTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR CAA 90 bp | TCTCCTCCAAACCTTAGGGTGTGTGCAGGCCCTGGTGCATTGACCTaGACCATGGGCCTCGGTCCTGGAAGCAGGTTGGTTCTTTGGGTA | + |
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Preference number: 2 (lower is better) Translates to: SPPNLRVCAGPGALT*TMGLGPGSRLVLWV Trigger: TACCCAAAGAACCAACCTGCTTCCAGGACCGAGGCCCATGGTCAAGGTCAATGCACCAGGGCCTGCACACACCCTAAGGTTTGGAGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR CAA 90 bp | GCTAATTCAGGCCTGAAGGACTTGGAGATCCTTCATACCTGGTCCTaGAGCCGTGGTCCAGGAGAGGAAAGGGGTGAGGGTGGTAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: ANSGLKDLEILHTWS*SRGPGEERGEGGRQ Trigger: CTGCCTACCACCCTCACCCCTTTCCTCTCCTGGACCACGGCTCAAGGACCAGGTATGAAGGATCTCCAAGTCCTTCAGGCCTGAATTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR-3UTR GCA 90 bp | GGCCTCGGTCCTGGAAGCAGGTTGGTTCTTTGGGTACAAAGGTCAGGGTCTTTGCCCAGGTCTGGCCCCTaGCTTACAGAAGTGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: GLGPGSRLVLWVQRSGSLPRSGP*LTEVCV Trigger: CACACACACTTCTGTAAGGCAGGGGCCAGACCTGGG...CAAAGACCCTGACCTTTGTACCCAAAGAACCAACCTGCTTCCAGGACCGAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR-3UTR CCA 90 bp | GATCCTGTCCTAAGCACAGCAGGTGTGGAGGCTGCCAGGAGAAGGCAGACACTGCTGGAGGTTGGAAACTaGGAGCACTTTAGGCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: DPVLSTAGVEAARRRQTLLEVGN*EHFRPS Trigger: ACTGGGCCTAAAGTGCTCCCAGTTTCCAACCTCCAG...CAGTGTCTGCCTTCTCCTGGCAGCCTCCACACCTGCTGTGCTTAGGACAGGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR CAA 90 bp | CAGTGGGGTGGAGGCTTCCTGAAAGGGAACTCTCTGGGTAGTGGGTaGAGGCTGGGCAGTGGAGTCTTGGTAGTACAGAGTGGAGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: QWGGGFLKGNSLGSG*RLGSGVLVVQSGEE Trigger: TTCTTCTCCACTCTGTACTACCAAGACTCCACTGCCCAGCCTCAACCCACTACCCAGAGAGTTCCCTTTCAGGAAGCCTCCACCCCACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR CAA 90 bp | AGACCTGCTGGCAGGGGCCAGGGAAAGGTCCCTGCATATTCCAGTTaGAGTAGATGGACCGGGGTTAGGGTTCTGCCTTGTGATCAAAGG | + |
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Preference number: 2 (lower is better) Translates to: RPAGRGQGKVPAYSS*SRWTGVRVLPCDQR Trigger: CCTTTGATCACAAGGCAGAACCCTAACCCCGGTCCATCTACTCAAACTGGAATATGCAGGGACCTTTCCCTGGCCCCTGCCAGCAGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR-3UTR CCA 90 bp | CACAGGCCAGAAGCTCTCCTGGAAGGGGTTTTTCTAAGGTCTCCAAAGTCAGTGCTGGTCCTTGAGCCGTaGTCCAGGAGAGGAAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: HRPEALLEGVFLRSPKSVLVLEP*SRRGKG Trigger: CCCCTTTCCTCTCCTGGACCACGGCTCAAGGACCAG...CACTGACTTTGGAGACCTTAGAAAAACCCCTTCCAGGAGAGCTTCTGGCCTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR CAA 90 bp | GGTCCTGGAAGCAGGTTGGTTCTTTGGGTACAAAGGTCAGGGTCTTaGTTTAGAATGTCTCACTGTGGACACCCAGGTCTGGCCCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: GPGSRLVLWVQRSGS*FRMSHCGHPGLAPA Trigger: GGCAGGGGCCAGACCTGGGTGTCCACAGTGAGACATTCTAAACAAAGACCCTGACCTTTGTACCCAAAGAACCAACCTGCTTCCAGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCCTTTTGGTTCCCTGGAGAATGAAGCCACATCTGAGTCTCTCCAGCTGACTGTGTGCAGGCCCTGGTaGATTGACCTTGACCATGGG | + |
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Preference number: 2 (lower is better) Translates to: LPFGSLENEATSESLQLTVCRPW*IDLDHG Trigger: CCCATGGTCAAGGTCAATGCACCAGGGCCTGCACAC...AGTCAGCTGGAGAGACTCAGATGTGGCTTCATTCTCCAGGGAACCAAAAGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR-3UTR CCA 90 bp | TGCCATTCTGTCCTCTTGTCCCAGGTGGGATGGCAGAACGGTGGTAGGGTTGTTTGTGTGTGTGTGTGTTaGGGGGACCTAGGCAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: CHSVLLSQVGWQNGGRVVCVCVC*GDLGRN Trigger: ATTCCTGCCTAGGTCCCCCCAACACACACACACACA...AACAACCCTACCACCGTTCTGCCATCCCACCTGGGACAAGAGGACAGAATGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR-3UTR GCA 90 bp | TGCCATTCTGTCCTCTTGTCCCAGGTGGGATGGCAGAACGGTGGTAGGGTTGTTGAGAAGTGTACCCTCTaGCTTTTGGTTCCCTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: CHSVLLSQVGWQNGGRVVEKCTL*LLVPWR Trigger: TCTCCAGGGAACCAAAAGGCAGAGGGTACACTTCTC...AACAACCCTACCACCGTTCTGCCATCCCACCTGGGACAAGAGGACAGAATGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR CAA 90 bp | CCCTTCCTTCCAGGGAAGGACTTAATATCAGGTCTGTCCTGGAGGTaGGAAACTGGGAGCACTTTAGGCCCAGTTCTTGGATGGGAGATG | + |
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Preference number: 2 (lower is better) Translates to: PFLPGKDLISGLSWR*ETGSTLGPVLGWEM Trigger: CATCTCCCATCCAAGAACTGGGCCTAAAGTGCTCCCAGTTTCCAACCTCCAGGACAGACCTGATATTAAGTCCTTCCCTGGAAGGAAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR-3UTR TCA 90 bp | TTTTCTAAGGTCTCCAAAGTCAGTGCCATTCTGTCCTCTTGTCCCAGGTGGGATGCTGGGATAAGAGGGTaGCTGCTCTTTCACAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: FSKVSKVSAILSSCPRWDAGIRG*LLFHRG Trigger: CCCCCTGTGAAAGAGCAGTCACCCTCTTATCCCAGC...ATCCCACCTGGGACAAGAGGACAGAATGGCACTGACTTTGGAGACCTTAGAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR CAA 90 bp | CCTGGTGCATTGACCTTGACCATGGGCCTCGGTCCTGGAAGCAGGTaGGTTCTTTGGGTACAAAGGTCAGGGTCTTTGTTTAGAATGTCT | + |
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Preference number: 2 (lower is better) Translates to: PGALTLTMGLGPGSR*VLWVQRSGSLFRMS Trigger: AGACATTCTAAACAAAGACCCTGACCTTTGTACCCAAAGAACCAACCTGCTTCCAGGACCGAGGCCCATGGTCAAGGTCAATGCACCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR-3UTR CCA 90 bp | TTTTCTAAGGTCTCCAAAGTCAGTGCCATTCTGTCCTCTTGTCCCAGGTGGGATGGCAGTCCTCCTTCTTaGTCCTTAGCTCAGTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: FSKVSKVSAILSSCPRWDGSPPS*SLAQWG Trigger: ACCCCACTGAGCTAAGGACCAAGAAGGAGGACTGCC...ATCCCACCTGGGACAAGAGGACAGAATGGCACTGACTTTGGAGACCTTAGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR-3UTR CCA 90 bp | TTAATATCAGGTCTGTCCTGGAGGTTGGAAACTGGGAGCACTTTAGGCCCAGTTGTTGAGGCTGGGCAGTaGAGTCTTGGTAGTACAGAG | + |
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Preference number: 2 (lower is better) Translates to: LISGLSWRLETGSTLGPVVEAGQ*SLGSTE Trigger: CTCTGTACTACCAAGACTCCACTGCCCAGCCTCAAC...AACTGGGCCTAAAGTGCTCCCAGTTTCCAACCTCCAGGACAGACCTGATATTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR-3UTR CCA 90 bp | TCTATTAGACTAAATAGAAGCCTTTCCGGCTTCAGGGAGCTTTGGCACCACAAGTGCCTTTTGGTTCCCTaGAGAATGAAGCCACATCTG | + |
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Preference number: 2 (lower is better) Translates to: SIRLNRSLSGFRELWHHKCLLVP*RMKPHL Trigger: CAGATGTGGCTTCATTCTCCAGGGAACCAAAAGGCA...CTTGTGGTGCCAAAGCTCCCTGAAGCCGGAAAGGCTTCTATTTAGTCTAATAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR-3UTR CCA 90 bp | TCTATTAGACTAAATAGAAGCCTTTCCGGCTTCAGGGAGCTTTGGCACCACAAGCTTGGTAGTACAGAGTaGAGAAGAAGGCAAAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: SIRLNRSLSGFRELWHHKLGSTE*RRRQRE Trigger: TTCTCTTTGCCTTCTTCTCCACTCTGTACTACCAAG...CTTGTGGTGCCAAAGCTCCCTGAAGCCGGAAAGGCTTCTATTTAGTCTAATAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR TCA 72 bp | GAGCTGTGGGTGGGAAGAGCTGCTGGGATAAGAGGGTaGCTGCTCTTTCACAGGGGGACAGGGAGGGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: ELWVGRAAGIRG*LLFHRGTGRGR Trigger: TCTGCCCCTCCCTGTCCCCCTGTGAAAGAGCAGTCACCCTCTTATCCCAGCAGCTCTTCCCACCCACAGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR-3UTR CAA 90 bp | GATCCTGTCCTAAGCACAGCAGGTGTGGAGGCTGCCAGGAGAAGGCAGACACTGAGAACGGTGGTAGGGTaGTTTGAGTTGGGGGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: DPVLSTAGVEAARRRQTLRTVVG*FELGEG Trigger: CCCCTCCCCCAACTCAAACAACCCTACCACCGTTCT...CAGTGTCTGCCTTCTCCTGGCAGCCTCCACACCTGCTGTGCTTAGGACAGGATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR CCA 72 bp | CCCTGGTGCATTGACCTTGACCATGGGCCTCGGTCCTaGAAGCAGGTTGGTTCTTTGGGTACAAAGGTCAGG | + |
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Preference number: 3 (lower is better) Translates to: PWCIDLDHGPRS*KQVGSLGTKVR Trigger: CCTGACCTTTGTACCCAAAGAACCAACCTGCTTCCAGGACCGAGGCCCATGGTCAAGGTCAATGCACCAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR CCA 72 bp | AGACTAAATAGAAGCCTTTCCGGCTTCAGGGAGCTTTaGCACCACAAGGGGATAGGAGGCAGCGGCAGGGGT | + |
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Preference number: 3 (lower is better) Translates to: RLNRSLSGFREL*HHKGIGGSGRG Trigger: ACCCCTGCCGCTGCCTCCTATCCCCTTGTGGTGCCAAAGCTCCCTGAAGCCGGAAAGGCTTCTATTTAGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR-3UTR CAA 90 bp | GGCCAGGGAAAGGTCCCTGCATATTCCAGTTTGAGTAGATGGACCGGGGTTAGGCTGGGCAGTGGAGTCTaGGTAGTACAGAGTGGAGAA | + |
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Preference number: 3 (lower is better) Translates to: GQGKVPAYSSLSRWTGVRLGSGV*VVQSGE Trigger: TTCTCCACTCTGTACTACCAAGACTCCACTGCCCAG...CCTAACCCCGGTCCATCTACTCAAACTGGAATATGCAGGGACCTTTCCCTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR CCA 72 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTaGGGGGACCTAGGCAGGAATACAGGGCAGAAAGGA | + |
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Preference number: 3 (lower is better) Translates to: VCVCVCVCVCVC*GDLGRNTGQKG Trigger: TCCTTTCTGCCCTGTATTCCTGCCTAGGTCCCCCCAACACACACACACACACACACACACACACACACACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR CCA 72 bp | CTGCAGTCTGAGCATTCCCTGTATATTCCACAAGCTTaGCTTAGAGCTGGGGGTGGGGCAGTCCTCCTTCTT | + |
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Preference number: 3 (lower is better) Translates to: LQSEHSLYIPQA*LRAGGGAVLLL Trigger: AAGAAGGAGGACTGCCCCACCCCCAGCTCTAAGCCAAGCTTGTGGAATATACAGGGAATGCTCAGACTGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR CCA 72 bp | AATTCAGGCCTGAAGGACTTGGAGATCCTTCATACCTaGTCCTTGAGCCGTGGTCCAGGAGAGGAAAGGGGT | + |
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Preference number: 3 (lower is better) Translates to: NSGLKDLEILHT*SLSRGPGEERG Trigger: ACCCCTTTCCTCTCCTGGACCACGGCTCAAGGACCAGGTATGAAGGATCTCCAAGTCCTTCAGGCCTGAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR-3UTR CAA 90 bp | TTAATATCAGGTCTGTCCTGGAGGTTGGAAACTGGGAGCACTTTAGGCCCAGTTCGGCTTCAGGGAGCTTaGGCACCACAAGGGGATAGG | + |
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Preference number: 3 (lower is better) Translates to: LISGLSWRLETGSTLGPVRLQGA*APQGDR Trigger: CCTATCCCCTTGTGGTGCCAAAGCTCCCTGAAGCCG...AACTGGGCCTAAAGTGCTCCCAGTTTCCAACCTCCAGGACAGACCTGATATTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR CCA 72 bp | GTTGAGGCTGGGCAGTGGAGTCTTGGTAGTACAGAGTaGAGAAGAAGGCAAAGAGAAGTGTACCCTCTGCCT | + |
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Preference number: 3 (lower is better) Translates to: VEAGQWSLGSTE*RRRQREVYPLP Trigger: AGGCAGAGGGTACACTTCTCTTTGCCTTCTTCTCCACTCTGTACTACCAAGACTCCACTGCCCAGCCTCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR CCA 72 bp | TCCAAAGTCAGTGCCATTCTGTCCTCTTGTCCCAGGTaGGATGGCAGAACGGTGGTAGGGTTGTTTGAGTTG | + |
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Preference number: 3 (lower is better) Translates to: SKVSAILSSCPR*DGRTVVGLFEL Trigger: CAACTCAAACAACCCTACCACCGTTCTGCCATCCCACCTGGGACAAGAGGACAGAATGGCACTGACTTTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR-3UTR CAA 90 bp | TTAATATCAGGTCTGTCCTGGAGGTTGGAAACTGGGAGCACTTTAGGCCCAGTTCTTCATACCTGGTCCTaGAGCCGTGGTCCAGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: LISGLSWRLETGSTLGPVLHTWS*SRGPGE Trigger: CTCTCCTGGACCACGGCTCAAGGACCAGGTATGAAG...AACTGGGCCTAAAGTGCTCCCAGTTTCCAACCTCCAGGACAGACCTGATATTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR CCA 72 bp | CAGGGAAAGGTCCCTGCATATTCCAGTTTGAGTAGATaGACCGGGGTTAGGGTTCTGCCTTGTGATCAAAGG | + |
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Preference number: 3 (lower is better) Translates to: QGKVPAYSSLSR*TGVRVLPCDQR Trigger: CCTTTGATCACAAGGCAGAACCCTAACCCCGGTCCATCTACTCAAACTGGAATATGCAGGGACCTTTCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR GCA 72 bp | CAGAGTGGAGAAGAAGGCAAAGAGAAGTGTACCCTCTaGCTTTTGGTTCCCTGGAGAATGAAGCCACATCTG | + |
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Preference number: 3 (lower is better) Translates to: QSGEEGKEKCTL*LLVPWRMKPHL Trigger: CAGATGTGGCTTCATTCTCCAGGGAACCAAAAGGCAGAGGGTACACTTCTCTTTGCCTTCTTCTCCACTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR CCA 72 bp | ACCATGGGCCTCGGTCCTGGAAGCAGGTTGGTTCTTTaGGTACAAAGGTCAGGGTCTTTGTTTAGAATGTCT | + |
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Preference number: 3 (lower is better) Translates to: TMGLGPGSRLVL*VQRSGSLFRMS Trigger: AGACATTCTAAACAAAGACCCTGACCTTTGTACCCAAAGAACCAACCTGCTTCCAGGACCGAGGCCCATGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR CCA 72 bp | AACGGTGACAATCTGAGTTGTCTTCCTAGCTATTGCTaGGGCTGCACCTTTTGTCCCCAATGGAAGTTTCGC | + |
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Preference number: 3 (lower is better) Translates to: NGDNLSCLPSYC*GCTFCPQWKFR Trigger: GCGAAACTTCCATTGGGGACAAAAGGTGCAGCCCCAGCAATAGCTAGGAAGACAACTCAGATTGTCACCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR CCA 72 bp | TTCCTTCCAGGGAAGGACTTAATATCAGGTCTGTCCTaGAGGTTGGAAACTGGGAGCACTTTAGGCCCAGTT | + |
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Preference number: 3 (lower is better) Translates to: FLPGKDLISGLS*RLETGSTLGPV Trigger: AACTGGGCCTAAAGTGCTCCCAGTTTCCAACCTCCAGGACAGACCTGATATTAAGTCCTTCCCTGGAAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR-3UTR CAA 90 bp | TTAATATCAGGTCTGTCCTGGAGGTTGGAAACTGGGAGCACTTTAGGCCCAGTTCAAAGGTCAGGGTCTTaGTTTAGAATGTCTCACTGT | + |
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Preference number: 3 (lower is better) Translates to: LISGLSWRLETGSTLGPVQRSGS*FRMSHC Trigger: ACAGTGAGACATTCTAAACAAAGACCCTGACCTTTG...AACTGGGCCTAAAGTGCTCCCAGTTTCCAACCTCCAGGACAGACCTGATATTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS-3UTR CCA 90 bp | GATCCTGTCCTAAGCACAGCAGGTGTGGAGGCTGCCAGGAGAAGGCAGACACTGCCTCGGCCTCAGGGCTaGTGTCAGAACCCGGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: DPVLSTAGVEAARRRQTLPRPQG*CQNPGG Trigger: ACCACCCGGGTTCTGACACCAGCCCTGAGGCCGAGG...CAGTGTCTGCCTTCTCCTGGCAGCCTCCACACCTGCTGTGCTTAGGACAGGATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS-3UTR GCA 90 bp | GATCCTGTCCTAAGCACAGCAGGTGTGGAGGCTGCCAGGAGAAGGCAGACACTGGGAGCCCTGGAGGAATaGCAGAGCAACGAGGCCGAT | + |
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Preference number: 4 (lower is better) Translates to: DPVLSTAGVEAARRRQTLGALEE*QSNEAD Trigger: ATCGGCCTCGTTGCTCTGGCATTCCTCCAGGGCTCC...CAGTGTCTGCCTTCTCCTGGCAGCCTCCACACCTGCTGTGCTTAGGACAGGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS-3UTR CCA 90 bp | GGCAGACACTGTCACCTTCCTGTAGAGCACAGGCCAGAAGCTCTCCTGGAAGGGGAGGCTAGCAGCTCCTaGGGGGACATTGCAGTGACG | + |
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Preference number: 4 (lower is better) Translates to: GRHCHLPVEHRPEALLEGEASSS*GDIAVT Trigger: CGTCACTGCAATGTCCCCCCAGGAGCTGCTAGCCTC...CCCTTCCAGGAGAGCTTCTGGCCTGTGCTCTACAGGAAGGTGACAGTGTCTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS-3UTR CCA 90 bp | GATCCTGTCCTAAGCACAGCAGGTGTGGAGGCTGCCAGGAGAAGGCAGACACTGTATCTTGAACCCGGGTaGCCCATCGGACACTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: DPVLSTAGVEAARRRQTLYLEPG*PIGHWS Trigger: GCTCCAGTGTCCGATGGGCCACCCGGGTTCAAGATA...CAGTGTCTGCCTTCTCCTGGCAGCCTCCACACCTGCTGTGCTTAGGACAGGATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS-3UTR TCA 90 bp | GGCAGACACTGTCACCTTCCTGTAGAGCACAGGCCAGAAGCTCTCCTGGAAGGGTCACGATCCAGACAATaGGAGCAAGGCCCACAGAGC | + |
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Preference number: 4 (lower is better) Translates to: GRHCHLPVEHRPEALLEGSRSRQ*EQGPQS Trigger: GCTCTGTGGGCCTTGCTCTCATTGTCTGGATCGTGA...CCCTTCCAGGAGAGCTTCTGGCCTGTGCTCTACAGGAAGGTGACAGTGTCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS-3UTR CCA 90 bp | GATCCTGTCCTAAGCACAGCAGGTGTGGAGGCTGCCAGGAGAAGGCAGACACTGAACACACTGGGAAGGTaGCCTTCTCTGGCTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: DPVLSTAGVEAARRRQTLNTLGR*PSLAPA Trigger: TGCTGGAGCCAGAGAAGGCCACCTTCCCAGTGTGTT...CAGTGTCTGCCTTCTCCTGGCAGCCTCCACACCTGCTGTGCTTAGGACAGGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR CAA 72 bp | AACCTTAGGGTGTGTGCAGGCCCTGGTGCATTGACCTaGACCATGGGCCTCGGTCCTGGAAGCAGGTTGGTT | + |
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Preference number: 4 (lower is better) Translates to: NLRVCAGPGALT*TMGLGPGSRLV Trigger: AACCAACCTGCTTCCAGGACCGAGGCCCATGGTCAAGGTCAATGCACCAGGGCCTGCACACACCCTAAGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR CAA 72 bp | GGCCTGAAGGACTTGGAGATCCTTCATACCTGGTCCTaGAGCCGTGGTCCAGGAGAGGAAAGGGGTGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: GLKDLEILHTWS*SRGPGEERGEG Trigger: ACCCTCACCCCTTTCCTCTCCTGGACCACGGCTCAAGGACCAGGTATGAAGGATCTCCAAGTCCTTCAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS-3UTR TCA 90 bp | GGGTCTTTGTTTAGAATGTCTCACTGTGGACACCCAGGTCTGGCCCCTGCCTTAGGGTGGAGAGGCATGTaGAGAGCAGGGCTGGGATTG | + |
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Preference number: 4 (lower is better) Translates to: GSLFRMSHCGHPGLAPALGWRGM*RAGLGL Trigger: CAATCCCAGCCCTGCTCTTCACATGCCTCTCCACCC...TAAGGCAGGGGCCAGACCTGGGTGTCCACAGTGAGACATTCTAAACAAAGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS-3UTR GCA 90 bp | GGCCTCGGTCCTGGAAGCAGGTTGGTTCTTTGGGTACAAAGGTCAGGGTCTTTGGGGCTGGGATTGGAGTaGAGCGCTTCACGTGGATCA | + |
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Preference number: 4 (lower is better) Translates to: GLGPGSRLVLWVQRSGSLGLGLE*SASRGS Trigger: TGATCCACGTGAAGCGCTGCACTCCAATCCCAGCCC...CAAAGACCCTGACCTTTGTACCCAAAGAACCAACCTGCTTCCAGGACCGAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS-3UTR CCA 90 bp | GATCCTGTCCTAAGCACAGCAGGTGTGGAGGCTGCCAGGAGAAGGCAGACACTGGCTTCACGTGGATCATaGCCAACACACTGGGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: DPVLSTAGVEAARRRQTLASRGS*PTHWEG Trigger: ACCTTCCCAGTGTGTTGGCCATGATCCACGTGAAGC...CAGTGTCTGCCTTCTCCTGGCAGCCTCCACACCTGCTGTGCTTAGGACAGGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS-3UTR TCA 90 bp | GGACTTAATATCAGGTCTGTCCTGGAGGTTGGAAACTGGGAGCACTTTAGGCCCGCTGTGAAGATATCTTaGACCCGGGTGGCCCATCGG | + |
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Preference number: 4 (lower is better) Translates to: GLNIRSVLEVGNWEHFRPAVKIS*TRVAHR Trigger: CCGATGGGCCACCCGGGTTCAAGATATCTTCACAGC...GGGCCTAAAGTGCTCCCAGTTTCCAACCTCCAGGACAGACCTGATATTAAGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS-3UTR TCA 90 bp | GGGTCTTTGTTTAGAATGTCTCACTGTGGACACCCAGGTCTGGCCCCTGCCTTAGGAGCTTCCCAGCTGTaGAGATATCTTGAACCCGGG | + |
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Preference number: 4 (lower is better) Translates to: GSLFRMSHCGHPGLAPALGASQL*RYLEPG Trigger: CCCGGGTTCAAGATATCTTCACAGCTGGGAAGCTCC...TAAGGCAGGGGCCAGACCTGGGTGTCCACAGTGAGACATTCTAAACAAAGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS-3UTR TCA 90 bp | CTGCCTTTTGGTTCCCTGGAGAATGAAGCCACATCTGAGTCTCTCCAGCTGACTTGTACATGTCACTGGTaGCCAGCATCAGCAGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LPFGSLENEATSESLQLTCTCHW*PASAGW Trigger: CCACCCTGCTGATGCTGGTCACCAGTGACATGTACA...AGTCAGCTGGAGAGACTCAGATGTGGCTTCATTCTCCAGGGAACCAAAAGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS-3UTR TCA 90 bp | GGCCAGGGAAAGGTCCCTGCATATTCCAGTTTGAGTAGATGGACCGGGGTTAGGACCACACACATCTTCTaGCTCACTAGGGTTAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: GQGKVPAYSSLSRWTGVRTTHIF*LTRVRD Trigger: GTCCCTAACCCTAGTGAGTCAGAAGATGTGTGTGGT...CCTAACCCCGGTCCATCTACTCAAACTGGAATATGCAGGGACCTTTCCCTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS-3UTR CCA 90 bp | GGTGACAATCTGAGTTGTCTTCCTAGCTATTGCTGGGGCTGCACCTTTTGTCCCTGTGAAGAGCAGGGCTaGGATTGGAGTGCAGCGCTT | + |
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Preference number: 4 (lower is better) Translates to: GDNLSCLPSYCWGCTFCPCEEQG*DWSAAL Trigger: AAGCGCTGCACTCCAATCCCAGCCCTGCTCTTCACA...GGGACAAAAGGTGCAGCCCCAGCAATAGCTAGGAAGACAACTCAGATTGTCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS-3UTR CCA 90 bp | TGGAGTCTTGGTAGTACAGAGTGGAGAAGAAGGCAAAGAGAAGTGTACCCTCTGGAAGGTGGCCTTCTCTaGCTCCAGCAAAGAACAGCC | + |
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Preference number: 4 (lower is better) Translates to: WSLGSTEWRRRQREVYPLEGGLL*LQQRTA Trigger: GGCTGTTCTTTGCTGGAGCCAGAGAAGGCCACCTTC...CAGAGGGTACACTTCTCTTTGCCTTCTTCTCCACTCTGTACTACCAAGACTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS-3UTR CCA 90 bp | TCTATTAGACTAAATAGAAGCCTTTCCGGCTTCAGGGAGCTTTGGCACCACAAGGTGCAGCGCTTCACGTaGATCATGGCCAACACACTG | + |
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Preference number: 4 (lower is better) Translates to: SIRLNRSLSGFRELWHHKVQRFT*IMANTL Trigger: CAGTGTGTTGGCCATGATCCACGTGAAGCGCTGCAC...CTTGTGGTGCCAAAGCTCCCTGAAGCCGGAAAGGCTTCTATTTAGTCTAATAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS-3UTR GCA 90 bp | GGGTCTTTGTTTAGAATGTCTCACTGTGGACACCCAGGTCTGGCCCCTGCCTTAAAGATGGGCTTGTGTTaGTCCTCTAAGTCATCAGTT | + |
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Preference number: 4 (lower is better) Translates to: GSLFRMSHCGHPGLAPALKMGLC*SSKSSV Trigger: AACTGATGACTTAGAGGAGCAACACAAGCCCATCTT...TAAGGCAGGGGCCAGACCTGGGTGTCCACAGTGAGACATTCTAAACAAAGACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| 3UTR CAA 72 bp | AGCAGGTTGGTTCTTTGGGTACAAAGGTCAGGGTCTTaGTTTAGAATGTCTCACTGTGGACACCCAGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: SRLVLWVQRSGS*FRMSHCGHPGL Trigger: CAGACCTGGGTGTCCACAGTGAGACATTCTAAACAAAGACCCTGACCTTTGTACCCAAAGAACCAACCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS-3UTR GCA 90 bp | GGGTCTTTGTTTAGAATGTCTCACTGTGGACACCCAGGTCTGGCCCCTGCCTTATCTCCTTTGCATATCTaGACAATACCCATGATGATG | + |
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Preference number: 4 (lower is better) Translates to: GSLFRMSHCGHPGLAPALSPLHI*TIPMMM Trigger: CATCATCATGGGTATTGTGCAGATATGCAAAGGAGA...TAAGGCAGGGGCCAGACCTGGGTGTCCACAGTGAGACATTCTAAACAAAGACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS-3UTR GCA 90 bp | GGCCTCGGTCCTGGAAGCAGGTTGGTTCTTTGGGTACAAAGGTCAGGGTCTTTGAGAAGAATTCTCCTTTaGATATCTGCACAATACCCA | + |
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Preference number: 4 (lower is better) Translates to: GLGPGSRLVLWVQRSGSLRRILL*ISAQYP Trigger: TGGGTATTGTGCAGATATGCAAAGGAGAATTCTTCT...CAAAGACCCTGACCTTTGTACCCAAAGAACCAACCTGCTTCCAGGACCGAGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS-3UTR GCA 90 bp | TTAATATCAGGTCTGTCCTGGAGGTTGGAAACTGGGAGCACTTTAGGCCCAGTTAAGGACTATCTGTCCTaGAACCGTTACCCCATAGAA | + |
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Preference number: 4 (lower is better) Translates to: LISGLSWRLETGSTLGPVKDYLS*NRYPIE Trigger: TTCTATGGGGTAACGGTTGCAGGACAGATAGTCCTT...AACTGGGCCTAAAGTGCTCCCAGTTTCCAACCTCCAGGACAGACCTGATATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS-3UTR CCA 90 bp | CTGCCTTTTGGTTCCCTGGAGAATGAAGCCACATCTGAGTCTCTCCAGCTGACTCCGATGTCAGGTTCTTaGAAATTCTCAAATGCATTC | + |
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Preference number: 4 (lower is better) Translates to: LPFGSLENEATSESLQLTPMSGS*KFSNAF Trigger: GAATGCATTTGAGAATTTCCAAGAACCTGACATCGG...AGTCAGCTGGAGAGACTCAGATGTGGCTTCATTCTCCAGGGAACCAAAAGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS-3UTR CCA 90 bp | TTTTCTAAGGTCTCCAAAGTCAGTGCCATTCTGTCCTCTTGTCCCAGGTGGGATCTCAAATGCATTCTTTaGCTCCAGCCAGAAGAATTC | + |
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Preference number: 4 (lower is better) Translates to: FSKVSKVSAILSSCPRWDLKCIL*LQPEEF Trigger: GAATTCTTCTGGCTGGAGCCAAAGAATGCATTTGAG...ATCCCACCTGGGACAAGAGGACAGAATGGCACTGACTTTGGAGACCTTAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS-3UTR GCA 90 bp | TGGAGTCTTGGTAGTACAGAGTGGAGAAGAAGGCAAAGAGAAGTGTACCCTCTGTTGGAAATTCTCAAATaGATTCTTTGGCTCCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: WSLGSTEWRRRQREVYPLLEILK*ILWLQP Trigger: TGGCTGGAGCCAAAGAATGCATTTGAGAATTTCCAA...CAGAGGGTACACTTCTCTTTGCCTTCTTCTCCACTCTGTACTACCAAGACTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS-3UTR CAA 90 bp | GGCAGACACTGTCACCTTCCTGTAGAGCACAGGCCAGAAGCTCTCCTGGAAGGGGAGGGCGATGACAGCTaGGTTGGTGGGGTAGATCAC | + |
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Preference number: 5 (lower is better) Translates to: GRHCHLPVEHRPEALLEGEGDDS*VGGVDH Trigger: GTGATCTACCCCACCAACCAAGCTGTCATCGCCCTC...CCCTTCCAGGAGAGCTTCTGGCCTGTGCTCTACAGGAAGGTGACAGTGTCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS-3UTR CAA 90 bp | GGGTCTTTGTTTAGAATGTCTCACTGTGGACACCCAGGTCTGGCCCCTGCCTTACGGACACTGGAGCAGTaGACCCATGTGAGGAGCAAC | + |
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Preference number: 5 (lower is better) Translates to: GSLFRMSHCGHPGLAPALRTLEQ*THVRSN Trigger: GTTGCTCCTCACATGGGTCAACTGCTCCAGTGTCCG...TAAGGCAGGGGCCAGACCTGGGTGTCCACAGTGAGACATTCTAAACAAAGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS GCA 90 bp | GAATCCGGGTCCTTGACAGGAGTAGGCTTGAAGATGGGCTTGTGTTaGTCCTCTAAGTCATCAGTTGTTTCCTCAGCCCCCGAGTTCCCC | + |
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Preference number: 5 (lower is better) Translates to: ESGSLTGVGLKMGLC*SSKSSVVSSAPEFP Trigger: GGGGAACTCGGGGGCTGAGGAAACAACTGATGACTTAGAGGAGCAACACAAGCCCATCTTCAAGCCTACTCCTGTCAAGGACCCGGATTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS-3UTR CAA 90 bp | TCTGAGCATTCCCTGTATATTCCACAAGCTTGGCTTAGAGCTGGGGGTGGGGCACCTCTAAGTCATCAGTaGTTTCCTCAGCCCCCGAGT | + |
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Preference number: 5 (lower is better) Translates to: SEHSLYIPQAWLRAGGGAPLSHQ*FPQPPS Trigger: ACTCGGGGGCTGAGGAAACAACTGATGACTTAGAGG...TGCCCCACCCCCAGCTCTAAGCCAAGCTTGTGGAATATACAGGGAATGCTCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS-3UTR CAA 90 bp | GATCCTGTCCTAAGCACAGCAGGTGTGGAGGCTGCCAGGAGAAGGCAGACACTGCAGAAGAATTCTCCTTaGCATATCTGCACAATACCC | + |
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Preference number: 5 (lower is better) Translates to: DPVLSTAGVEAARRRQTLQKNSP*HICTIP Trigger: GGGTATTGTGCAGATATGCAAAGGAGAATTCTTCTG...CAGTGTCTGCCTTCTCCTGGCAGCCTCCACACCTGCTGTGCTTAGGACAGGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS-3UTR CAA 90 bp | GATCCTGTCCTAAGCACAGCAGGTGTGGAGGCTGCCAGGAGAAGGCAGACACTGTCTCAAATGCATTCTTaGGCTCCAGCCAGAAGAATT | + |
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Preference number: 5 (lower is better) Translates to: DPVLSTAGVEAARRRQTLSQMHS*APARRI Trigger: AATTCTTCTGGCTGGAGCCAAAGAATGCATTTGAGA...CAGTGTCTGCCTTCTCCTGGCAGCCTCCACACCTGCTGTGCTTAGGACAGGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS-3UTR CAA 90 bp | GGCAGACACTGTCACCTTCCTGTAGAGCACAGGCCAGAAGCTCTCCTGGAAGGGGCCGATGTCAGGTTCTaGGAAATTCTCAAATGCATT | + |
|
Preference number: 5 (lower is better) Translates to: GRHCHLPVEHRPEALLEGADVRF*EILKCI Trigger: AATGCATTTGAGAATTTCCAAGAACCTGACATCGGC...CCCTTCCAGGAGAGCTTCTGGCCTGTGCTCTACAGGAAGGTGACAGTGTCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS-3UTR CAA 90 bp | GGACTTAATATCAGGTCTGTCCTGGAGGTTGGAAACTGGGAGCACTTTAGGCCCACACTTGGGTTTGTGTaGCCAGTAGACACCCAGGAA | + |
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Preference number: 5 (lower is better) Translates to: GLNIRSVLEVGNWEHFRPTLGFV*PVDTQE Trigger: TTCCTGGGTGTCTACTGGCAACACAAACCCAAGTGT...GGGCCTAAAGTGCTCCCAGTTTCCAACCTCCAGGACAGACCTGATATTAAGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS CCA 90 bp | GAGCCCTGGAGGAATGCCAGAGCAACGAGGCCGATGTCAGGTTCTTaGAAATTCTCAAATGCATTCTTTGGCTCCAGCCAGAAGAATTCT | + |
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Preference number: 5 (lower is better) Translates to: EPWRNARATRPMSGS*KFSNAFFGSSQKNS Trigger: AGAATTCTTCTGGCTGGAGCCAAAGAATGCATTTGAGAATTTCCAAGAACCTGACATCGGCCTCGTTGCTCTGGCATTCCTCCAGGGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS-3UTR CAA 90 bp | TCTATTAGACTAAATAGAAGCCTTTCCGGCTTCAGGGAGCTTTGGCACCACAAGAGCTGTGAAGATATCTaGAACCCGGGTGGCCCATCG | + |
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Preference number: 5 (lower is better) Translates to: SIRLNRSLSGFRELWHHKSCEDI*NPGGPS Trigger: CGATGGGCCACCCGGGTTCAAGATATCTTCACAGCT...CTTGTGGTGCCAAAGCTCCCTGAAGCCGGAAAGGCTTCTATTTAGTCTAATAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS CCA 90 bp | TTCTCTCCAAAAGTCACAGCAACTGCATTGGAGGCTAGCAGCTCCTaGGGGGACATTGCAGTGACGTATGCAATATTAGCAAAGACGTAC | + |
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Preference number: 5 (lower is better) Translates to: FSPKVTATALEASSS*GDIAVTYAILAKTY Trigger: GTACGTCTTTGCTAATATTGCATACGTCACTGCAATGTCCCCCCAGGAGCTGCTAGCCTCCAATGCAGTTGCTGTGACTTTTGGAGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS CCA 72 bp | CTAGCCTCGGCCTCAGGGCTGGTGTCAGAACCCGGGTaGTTCTTCGCGGTGTTGTTTCGCTGGCGGGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: LASASGLVSEPG*FFAVLFRWRAP Trigger: GGGAGCCCGCCAGCGAAACAACACCGCGAAGAACCACCCGGGTTCTGACACCAGCCCTGAGGCCGAGGCTAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS CCA 72 bp | AAAGTCACAGCAACTGCATTGGAGGCTAGCAGCTCCTaGGGGGACATTGCAGTGACGTATGCAATATTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: KVTATALEASSS*GDIAVTYAILA Trigger: TGCTAATATTGCATACGTCACTGCAATGTCCCCCCAGGAGCTGCTAGCCTCCAATGCAGTTGCTGTGACTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS CAA 72 bp | TCCGGGTCCTTGACAGGAGTAGGCTTGAAGATGGGCTaGTGTTGCTCCTCTAAGTCATCAGTTGTTTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: SGSLTGVGLKMG*CCSSKSSVVSS Trigger: TGAGGAAACAACTGATGACTTAGAGGAGCAACACAAGCCCATCTTCAAGCCTACTCCTGTCAAGGACCCGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS TCA 72 bp | TTCCCCTCCTGGGGATACACGACCACACACATCTTCTaGCTCACTAGGGTTAGGGACTTAATGAAGTCATTG | + |
|
Preference number: 6 (lower is better) Translates to: FPSWGYTTTHIF*LTRVRDLMKSL Trigger: CAATGACTTCATTAAGTCCCTAACCCTAGTGAGTCAGAAGATGTGTGTGGTCGTGTATCCCCAGGAGGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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| CDS CAA 90 bp | CAACGAGGCCGATGTCAGGTTCTTGGAAATTCTCAAATGCATTCTTaGGCTCCAGCCAGAAGAATTCTCCTTTGCATATCTGCACAATAC | + |
|
Preference number: 6 (lower is better) Translates to: QRGRCQVLGNSQMHS*APARRILLCISAQY Trigger: GTATTGTGCAGATATGCAAAGGAGAATTCTTCTGGCTGGAGCCAAAGAATGCATTTGAGAATTTCCAAGAACCTGACATCGGCCTCGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022787.8 |
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