Pregenerated sensors for SLC7A6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031904Ensembl transcript IDs: ENSMUST00000034378.5, ENSMUST00000211824.2, ENSMUST00000212377.2, ENSMUST00000212802.2
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCCCCCGAAGCAGGACAGAGCAACAGCAATGGGGATGGTCCAACTaGACATGCCGAATGTCTGGTCAGCAAATGTCACAGCCACAGCGT | + |
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Preference number: 1 (lower is better) Translates to: GPRSRTEQQQWGWSN*TCRMSGQQMSQPQR Trigger: ACGCTGTGGCTGTGACATTTGCTGACCAGACATTCGGCATGTTCAGTTGGACCATCCCCATTGCTGTTGCTCTGTCCTGCTTCGGGGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
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| 3UTR CCA 90 bp | GTGCAATTGAACAGTAACGCAGGCACGGGTGTAAAGCGCTCAATATaGATCATGGACAGAAGGTTCGGGAGGTGGCCCTCACGAGAGCCC | + |
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Preference number: 1 (lower is better) Translates to: VQLNSNAGTGVKRSI*IMDRRFGRWPSREP Trigger: GGGCTCTCGTGAGGGCCACCTCCCGAACCTTCTGTCCATGATCCATATTGAGCGCTTTACACCCGTGCCTGCGTTACTGTTCAATTGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
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| 3UTR CCA 90 bp | GACAGTAGCCAGCACATTCCTAATAAAGAGTGGTCTCCGGGACTCTaGCAGGTATACACCCAAGAAGTAGACAGGGACCCCAGAGAGGGC | + |
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Preference number: 1 (lower is better) Translates to: DSSQHIPNKEWSPGL*QVYTQEVDRDPREG Trigger: GCCCTCTCTGGGGTCCCTGTCTACTTCTTGGGTGTATACCTGCCAGAGTCCCGGAGACCACTCTTTATTAGGAATGTGCTGGCTACTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
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| 3UTR TCA 90 bp | CCATCTTCAGGCTGGCCTAATTGGTATCTTCCCATAGCTTACCAATaGGAGAGCATTGGCCCTGAGCCCCCTTACAGAATGTGGGCCAAG | + |
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Preference number: 1 (lower is better) Translates to: PSSGWPNWYLPIAYQ*ESIGPEPPYRMWAK Trigger: CTTGGCCCACATTCTGTAAGGGGGCTCAGGGCCAATGCTCTCTCATTGGTAAGCTATGGGAAGATACCAATTAGGCCAGCCTGAAGATGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
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| 3UTR CCA 90 bp | CTTGAGCCTGAAGTTCCGGGGAGGGAGGGAGTGTTGTTCCTCTTGTaGAATTCAGGAAGGAGGCACACATTGATCCCATGTCAGTTACAC | + |
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Preference number: 1 (lower is better) Translates to: LEPEVPGREGVLFLL*NSGRRHTLIPCQLH Trigger: GTGTAACTGACATGGGATCAATGTGTGCCTCCTTCCTGAATTCCACAAGAGGAACAACACTCCCTCCCTCCCCGGAACTTCAGGCTCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
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| 3UTR CCA 90 bp | GTGACAGTTGTGGCTTGTCCAGGTAGTAGAGACGCTCCACTCAGCTaGAGTAGTGAGGTTTTTCTCTCAGCCCTTGTTTCAAGGGCTCCA | + |
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Preference number: 1 (lower is better) Translates to: VTVVACPGSRDAPLS*SSEVFLSALVSRAP Trigger: TGGAGCCCTTGAAACAAGGGCTGAGAGAAAAACCTCACTACTCCAGCTGAGTGGAGCGTCTCTACTACCTGGACAAGCCACAACTGTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
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| 3UTR CCA 90 bp | CTGGGTGACTCTGGTGACAGTAGCCAGCACATTCCTAATAAAGAGTaGTCTCCGGGACTCTGGCAGGTATACACCCAAGAAGTAGACAGG | + |
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Preference number: 1 (lower is better) Translates to: LGDSGDSSQHIPNKE*SPGLWQVYTQEVDR Trigger: CCTGTCTACTTCTTGGGTGTATACCTGCCAGAGTCCCGGAGACCACTCTTTATTAGGAATGTGCTGGCTACTGTCACCAGAGTCACCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
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| 3UTR CCA 90 bp | GAATGTGGGCCAAGAGGCTCCTTTAATTCAGAAGGTTTAGGGAACTaGTCTTTGGTGGCTGCGACCACAGCCTTTTGGGCTTCAGGGAAT | + |
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Preference number: 1 (lower is better) Translates to: ECGPRGSFNSEGLGN*SLVAATTAFWASGN Trigger: ATTCCCTGAAGCCCAAAAGGCTGTGGTCGCAGCCACCAAAGACCAGTTCCCTAAACCTTCTGAATTAAAGGAGCCTCTTGGCCCACATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
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| 3UTR CCA 90 bp | AGAGCAACAGCAATGGGGATGGTCCAACTGAACATGCCGAATGTCTaGTCAGCAAATGTCACAGCCACAGCGTCACTCTTATGGACATCC | + |
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Preference number: 1 (lower is better) Translates to: RATAMGMVQLNMPNV*SANVTATASLLWTS Trigger: GGATGTCCATAAGAGTGACGCTGTGGCTGTGACATTTGCTGACCAGACATTCGGCATGTTCAGTTGGACCATCCCCATTGCTGTTGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
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| 3UTR TCA 90 bp | AGGGAGTGTTGTTCCTCTTGTGGAATTCAGGAAGGAGGCACACATTaGTCCCATGTCAGTTACACAGCACCTTGCTGTTCATGCCACCCA | + |
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Preference number: 1 (lower is better) Translates to: RECCSSCGIQEGGTH*SHVSYTAPCCSCHP Trigger: TGGGTGGCATGAACAGCAAGGTGCTGTGTAACTGACATGGGATCAATGTGTGCCTCCTTCCTGAATTCCACAAGAGGAACAACACTCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
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| 3UTR TCA 90 bp | GATTCAGCTAGGAAGGGCACAATCAAGTGGCCCAGTCGAATTCCTTaGAAAGCCAGAAGCTCACCTCCTTGCCTGAGAATCCTGACCATA | + |
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Preference number: 1 (lower is better) Translates to: DSARKGTIKWPSRIP*KARSSPPCLRILTI Trigger: TATGGTCAGGATTCTCAGGCAAGGAGGTGAGCTTCTGGCTTTTCAAGGAATTCGACTGGGCCACTTGATTGTGCCCTTCCTAGCTGAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
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| 3UTR GCA 90 bp | TCCCTGACACAGTTTAACAAGGCCCATGATAATGATGGCAATGAGTaGCAGGACCTTGGCATACGTGAATGTGTCTTGTACTCGTGTGCC | + |
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Preference number: 1 (lower is better) Translates to: SLTQFNKAHDNDGNE*QDLGIRECVLYSCA Trigger: GGCACACGAGTACAAGACACATTCACGTATGCCAAGGTCCTGGCACTCATTGCCATCATTATCATGGGCCTTGTTAAACTGTGTCAGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
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| 3UTR CCA 90 bp | GTCCGATCACCAGAATTAGTTTCTACCGTTTACCAGGAGCGAGGCTaGGGTGGAAGCTGTTTTCTCCCACAGTCTTCATCGATCTTCATA | + |
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Preference number: 1 (lower is better) Translates to: VRSPELVSTVYQERG*GGSCFLPQSSSIFI Trigger: TATGAAGATCGATGAAGACTGTGGGAGAAAACAGCTTCCACCCCAGCCTCGCTCCTGGTAAACGGTAGAAACTAATTCTGGTGATCGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
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| 3UTR TCA 90 bp | TGCCCAGCCCTTGGACAAGAGAAGGCAAGCGGGTATACTGTCCCATaGCCCAAGCATGTAAACAAAGCTTGGTGCTTTCAGAAAATTAGT | + |
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Preference number: 1 (lower is better) Translates to: CPALGQEKASGYTVP*PKHVNKAWCFQKIS Trigger: ACTAATTTTCTGAAAGCACCAAGCTTTGTTTACATGCTTGGGTCATGGGACAGTATACCCGCTTGCCTTCTCTTGTCCAAGGGCTGGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
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| 3UTR GCA 90 bp | CTACAATCTTGTGTAGACACACTGCTCACAGAGATTCACGCCTATTaGTTTGGCTTTAACTGGCAGCCTAGTCCGATCACCAGAATTAGT | + |
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Preference number: 1 (lower is better) Translates to: LQSCVDTLLTEIHAY*FGFNWQPSPITRIS Trigger: ACTAATTCTGGTGATCGGACTAGGCTGCCAGTTAAAGCCAAAGCAATAGGCGTGAATCTCTGTGAGCAGTGTGTCTACACAAGATTGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
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| 3UTR CCA 90 bp | TCTTCAGTTACATCTAGCTCAGTCAAGACGCAAAAGCAAAGCTTCTaGGTGACTCTGGTGACAGTAGCCAGCACATTCCTAATAAAGAGT | + |
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Preference number: 1 (lower is better) Translates to: SSVTSSSVKTQKQSF*VTLVTVASTFLIKS Trigger: ACTCTTTATTAGGAATGTGCTGGCTACTGTCACCAGAGTCACCCAGAAGCTTTGCTTTTGCGTCTTGACTGAGCTAGATGTAACTGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
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| 3UTR GCA 90 bp | TGTGAATCAAGAGCCAGAGCTGTCAGTCTAATATTCCTTCAGGGCTaGATCTACTCATCAGAAGTAAAACTAAATCAATGCCCTGCCCAA | + |
|
Preference number: 1 (lower is better) Translates to: CESRARAVSLIFLQG*IYSSEVKLNQCPAQ Trigger: TTGGGCAGGGCATTGATTTAGTTTTACTTCTGATGAGTAGATGCAGCCCTGAAGGAATATTAGACTGACAGCTCTGGCTCTTGATTCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
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| 3UTR GCA 90 bp | AGGAGTCCAGTGACAACTGATAAATCAGGTTATCTACCTGAATTTTaGATAACACCTTATGTAGAACATTCCAGGCCTCTTGCAGTTCAT | + |
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Preference number: 1 (lower is better) Translates to: RSPVTTDKSGYLPEF*ITPYVEHSRPLAVH Trigger: ATGAACTGCAAGAGGCCTGGAATGTTCTACATAAGGTGTTATGCAAAATTCAGGTAGATAACCTGATTTATCAGTTGTCACTGGACTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
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| 3UTR CAA 90 bp | GCTCACTGTCTGCTTGAGCCTGAAGTTCCGGGGAGGGAGGGAGTGTaGTTCCTCTTGTGGAATTCAGGAAGGAGGCACACATTGATCCCA | + |
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Preference number: 2 (lower is better) Translates to: AHCLLEPEVPGREGV*FLLWNSGRRHTLIP Trigger: TGGGATCAATGTGTGCCTCCTTCCTGAATTCCACAAGAGGAACAACACTCCCTCCCTCCCCGGAACTTCAGGCTCAAGCAGACAGTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
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| 3UTR-3UTR TCA 90 bp | ACGGGTGTAAAGCGCTCAATATGGATCATGGACAGAAGGTTCGGGAGGTGGCCCAAGGGTGTCCCAACCTaGGTAAGAGAAGAGGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: TGVKRSIWIMDRRFGRWPKGVPT*VREEGR Trigger: TCTGCCCTCTTCTCTTACTCAGGTTGGGACACCCTT...GGGCCACCTCCCGAACCTTCTGTCCATGATCCATATTGAGCGCTTTACACCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCCCTTGTTTCAAGGGCTCCACAGCACCATGGATTCAGCTAGGAAGGGCACAACTAAATCAATGCCCTaGCCAACCTCCCCTCCCACT | + |
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Preference number: 2 (lower is better) Translates to: QPLFQGLHSTMDSARKGTTKSMP*PTSPPT Trigger: AGTGGGAGGGGAGGTTGGGCAGGGCATTGATTTAGT...TGTGCCCTTCCTAGCTGAATCCATGGTGCTGTGGAGCCCTTGAAACAAGGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGTAGTAGAGACGCTCCACTCAGCTGGAGTAGTGAGGTTTTTCTCTCAGCCCCCCATAGCTTACCAATaGGAGAGCATTGGCCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: QVVETLHSAGVVRFFSQPPIAYQ*ESIGPE Trigger: CTCAGGGCCAATGCTCTCTCATTGGTAAGCTATGGG...GGGCTGAGAGAAAAACCTCACTACTCCAGCTGAGTGGAGCGTCTCTACTACCTG 53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
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| 3UTR-3UTR GCA 90 bp | GTCTCCGGGACTCTGGCAGGTATACACCCAAGAAGTAGACAGGGACCCCAGAGAATTAAGCTCACTGTCTaGTTGAGCCTGAAGTTCCGG | + |
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Preference number: 2 (lower is better) Translates to: VSGTLAGIHPRSRQGPQRIKLTV*LSLKFR Trigger: CCGGAACTTCAGGCTCAAGCAGACAGTGAGCTTAAT...TCTCTGGGGTCCCTGTCTACTTCTTGGGTGTATACCTGCCAGAGTCCCGGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
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| 3UTR CAA 90 bp | GGGCCAAGAGGCTCCTTTAATTCAGAAGGTTTAGGGAACTGGTCTTaGGTGGCTGCGACCACAGCCTTTTGGGCTTCAGGGAATGTCATC | + |
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Preference number: 2 (lower is better) Translates to: GPRGSFNSEGLGNWS*VAATTAFWASGNVI Trigger: GATGACATTCCCTGAAGCCCAAAAGGCTGTGGTCGCAGCCACCAAAGACCAGTTCCCTAAACCTTCTGAATTAAAGGAGCCTCTTGGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
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| 3UTR CAA 90 bp | CTGCTTGAGCCTGAAGTTCCGGGGAGGGAGGGAGTGTTGTTCCTCTaGTGGAATTCAGGAAGGAGGCACACATTGATCCCATGTCAGTTA | + |
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Preference number: 2 (lower is better) Translates to: LLEPEVPGREGVLFL*WNSGRRHTLIPCQL Trigger: TAACTGACATGGGATCAATGTGTGCCTCCTTCCTGAATTCCACAAGAGGAACAACACTCCCTCCCTCCCCGGAACTTCAGGCTCAAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGTAGAGACGCTCCACTCAGCTGGAGTAGTGAGGTTTTTCTCTCAGCCCTTGTGGGGATGGTCCAACTaGACATGCCGAATGTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: VVETLHSAGVVRFFSQPLWGWSN*TCRMSG Trigger: ACCAGACATTCGGCATGTTCAGTTGGACCATCCCCA...CAAGGGCTGAGAGAAAAACCTCACTACTCCAGCTGAGTGGAGCGTCTCTACTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGTGAGGTTTTTCTCTCAGCCCTTGTTTCAAGGGCTCCACAGCACCATGGATGAGGAAAACTTCCCATaGAGGAGCCCCACTGTAGAC | + |
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Preference number: 2 (lower is better) Translates to: VVRFFSQPLFQGLHSTMDEENFP*RSPTVD Trigger: GTCTACAGTGGGGCTCCTTCATGGGAAGTTTTCCTC...ATCCATGGTGCTGTGGAGCCCTTGAAACAAGGGCTGAGAGAAAAACCTCACTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCCCTTGTTTCAAGGGCTCCACAGCACCATGGATTCAGCTAGGAAGGGCACAAGATCCTCAACAGTCTaGTTCCCATTAAGCTCACTG | + |
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Preference number: 2 (lower is better) Translates to: QPLFQGLHSTMDSARKGTRSSTV*FPLSSL Trigger: CAGTGAGCTTAATGGGAAGCAGACTGTTGAGGATCT...TGTGCCCTTCCTAGCTGAATCCATGGTGCTGTGGAGCCCTTGAAACAAGGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGTAGTAGAGACGCTCCACTCAGCTGGAGTAGTGAGGTTTTTCTCTCAGCCCAACATGCCGAATGTCTaGTCAGCAAATGTCACAGCC | + |
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Preference number: 2 (lower is better) Translates to: QVVETLHSAGVVRFFSQPNMPNV*SANVTA Trigger: GGCTGTGACATTTGCTGACCAGACATTCGGCATGTT...GGGCTGAGAGAAAAACCTCACTACTCCAGCTGAGTGGAGCGTCTCTACTACCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
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| 3UTR CAA 90 bp | AGAAGGTTTAGGGAACTGGTCTTTGGTGGCTGCGACCACAGCCTTTaGGGCTTCAGGGAATGTCATCTCTGGCTTCTAGTCAGTTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: RRFRELVFGGCDHSL*GFRECHLWLLVSFP Trigger: AGGAAAACTGACTAGAAGCCAGAGATGACATTCCCTGAAGCCCAAAAGGCTGTGGTCGCAGCCACCAAAGACCAGTTCCCTAAACCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGTTGTGGCTTGTCCAGGTAGTAGAGACGCTCCACTCAGCTGGAGTAGTGAGGTACCAAGCATTTTCTaGGACTTCAATCTCACCTGC | + |
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Preference number: 2 (lower is better) Translates to: TVVACPGSRDAPLSWSSEVPSIF*DFNLTC Trigger: GCAGGTGAGATTGAAGTCTCAGAAAATGCTTGGTAC...CTCACTACTCCAGCTGAGTGGAGCGTCTCTACTACCTGGACAAGCCACAACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
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| 3UTR-3UTR TCA 90 bp | CACATTCCTAATAAAGAGTGGTCTCCGGGACTCTGGCAGGTATACACCCAAGAACCTTTAAAGGCGTCCTaGAAGTGCTCAGTGTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: HIPNKEWSPGLWQVYTQEPLKAS*KCSVCP Trigger: GGGACACACTGAGCACTTTCAGGACGCCTTTAAAGG...TTCTTGGGTGTATACCTGCCAGAGTCCCGGAGACCACTCTTTATTAGGAATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTGTCCAGGTAGTAGAGACGCTCCACTCAGCTGGAGTAGTGAGGTTTTTCTCATTAAGCTCACTGTCTaGTTGAGCCTGAAGTTCCGG | + |
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Preference number: 2 (lower is better) Translates to: ACPGSRDAPLSWSSEVFLIKLTV*LSLKFR Trigger: CCGGAACTTCAGGCTCAAGCAGACAGTGAGCTTAAT...GAGAAAAACCTCACTACTCCAGCTGAGTGGAGCGTCTCTACTACCTGGACAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
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| 3UTR-3UTR GCA 90 bp | ACGGGTGTAAAGCGCTCAATATGGATCATGGACAGAAGGTTCGGGAGGTGGCCCGTTAGAGGACTTTCATaGCTAGATCCTCAACAGTCT | + |
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Preference number: 2 (lower is better) Translates to: TGVKRSIWIMDRRFGRWPVRGLS*LDPQQS Trigger: AGACTGTTGAGGATCTAGGCATGAAAGTCCTCTAAC...GGGCCACCTCCCGAACCTTCTGTCCATGATCCATATTGAGCGCTTTACACCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTTTCCAGCGAAGGTAGAGCTGTCCAACAACAGACAAGCCCACGAAGAACCAGTGTTGTTCCTCTTGTaGAATTCAGGAAGGAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: LFPAKVELSNNRQAHEEPVLFLL*NSGRRH Trigger: GTGCCTCCTTCCTGAATTCCACAAGAGGAACAACAC...TGGTTCTTCGTGGGCTTGTCTGTTGTTGGACAGCTCTACCTTCGCTGGAAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCACCTTGCTGTTCATGCCACCCAACAAACAAAAAGGGGAACACAACGCTCTCCACTTCCAGCAGAGTaGGCTTTTGTGAGTCCATAC | + |
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Preference number: 2 (lower is better) Translates to: QHLAVHATQQTKRGTQRSPLPAE*AFVSPY Trigger: GTATGGACTCACAAAAGCCCACTCTGCTGGAAGTGG...AGAGCGTTGTGTTCCCCTTTTTGTTTGTTGGGTGGCATGAACAGCAAGGTGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
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| 3UTR-3UTR CCA 90 bp | TGGGTGACTCTGGTGACAGTAGCCAGCACATTCCTAATAAAGAGTGGTCTCCGGGCTCAATATGGATCATaGACAGAAGGTTCGGGAGGT | + |
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Preference number: 2 (lower is better) Translates to: WVTLVTVASTFLIKSGLRAQYGS*TEGSGG Trigger: ACCTCCCGAACCTTCTGTCCATGATCCATATTGAGC...CCGGAGACCACTCTTTATTAGGAATGTGCTGGCTACTGTCACCAGAGTCACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
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| 3UTR CAA 90 bp | AGTTTAACAAGGCCCATGATAATGATGGCAATGAGTGCCAGGACCTaGGCATACGTGAATGTGTCTTGTACTCGTGTGCCCCACTTGACG | + |
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Preference number: 2 (lower is better) Translates to: SLTRPMIMMAMSART*AYVNVSCTRVPHLT Trigger: CGTCAAGTGGGGCACACGAGTACAAGACACATTCACGTATGCCAAGGTCCTGGCACTCATTGCCATCATTATCATGGGCCTTGTTAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
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| 3UTR-3UTR TCA 90 bp | AAAAATCAAGTAGCTGGACTTGGTCAGAGGGTCAGAGGAAAACTTCCCATGAAGCTCGTGTGCCCCACTTaGCGTAGGCACAGTTCACAA | + |
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Preference number: 2 (lower is better) Translates to: KNQVAGLGQRVRGKLPMKLVCPT*RRHSSQ Trigger: TTGTGAACTGTGCCTACGTCAAGTGGGGCACACGAG...CTTCATGGGAAGTTTTCCTCTGACCCTCTGACCAAGTCCAGCTACTTGATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTGTCCAGGTAGTAGAGACGCTCCACTCAGCTGGAGTAGTGAGGTTTTTCTCAGATCCTCAACAGTCTaGTTCCCATTAAGCTCACTG | + |
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Preference number: 2 (lower is better) Translates to: ACPGSRDAPLSWSSEVFLRSSTV*FPLSSL Trigger: CAGTGAGCTTAATGGGAAGCAGACTGTTGAGGATCT...GAGAAAAACCTCACTACTCCAGCTGAGTGGAGCGTCTCTACTACCTGGACAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCACCTTGCTGTTCATGCCACCCAACAAACAAAAAGGGGAACACAACGCTCTAACTACAAAGAGCTGTaGATCAAGAGCCAGAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: QHLAVHATQQTKRGTQRSNYKEL*IKSQSC Trigger: ACAGCTCTGGCTCTTGATTCACAGCTCTTTGTAGTT...AGAGCGTTGTGTTCCCCTTTTTGTTTGTTGGGTGGCATGAACAGCAAGGTGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
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| 3UTR-3UTR TCA 90 bp | AAAAATCAAGTAGCTGGACTTGGTCAGAGGGTCAGAGGAAAACTTCCCATGAAGTGCTCAGTGTGTCCCTaGCACAGTTTAACAAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: KNQVAGLGQRVRGKLPMKCSVCP*HSLTRP Trigger: GGGCCTTGTTAAACTGTGTCAGGGACACACTGAGCA...CTTCATGGGAAGTTTTCCTCTGACCCTCTGACCAAGTCCAGCTACTTGATTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
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| 3UTR-3UTR GCA 90 bp | GTAGTGAGGTTTTTCTCTCAGCCCTTGTTTCAAGGGCTCCACAGCACCATGGATGCACCTTGCTGTTCATaGCACCCAACAAACAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: VVRFFSQPLFQGLHSTMDAPCCS*HPTNKK Trigger: CTTTTTGTTTGTTGGGTGGCATGAACAGCAAGGTGC...ATCCATGGTGCTGTGGAGCCCTTGAAACAAGGGCTGAGAGAAAAACCTCACTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
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| 3UTR-3UTR CCA 90 bp | AAAAATCAAGTAGCTGGACTTGGTCAGAGGGTCAGAGGAAAACTTCCCATGAAGGCGACCACAGCCTTTTaGGCTTCAGGGAATGTCATC | + |
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Preference number: 2 (lower is better) Translates to: KNQVAGLGQRVRGKLPMKATTAF*ASGNVI Trigger: GATGACATTCCCTGAAGCCCAAAAGGCTGTGGTCGC...CTTCATGGGAAGTTTTCCTCTGACCCTCTGACCAAGTCCAGCTACTTGATTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGAGAGGGACACTCTATACACAATAAGATCCCAAAGACACAGCAACATTCGGGCGACCACAGCCTTTTaGGCTTCAGGGAATGTCATC | + |
|
Preference number: 2 (lower is better) Translates to: KERDTLYTIRSQRHSNIRATTAF*ASGNVI Trigger: GATGACATTCCCTGAAGCCCAAAAGGCTGTGGTCGC...CCGAATGTTGCTGTGTCTTTGGGATCTTATTGTGTATAGAGTGTCCCTCTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
||
| 3UTR-3UTR CCA 90 bp | GACAAGATCTTGTCTGATCTTTCCAGAGTGGCTACCTGGAAATTATGTAGCCTAACGGCAGGCCACATATaGAGGATCACAGGTGGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: DKILSDLSRVATWKLCSLTAGHI*RITGGE Trigger: TTCCCCACCTGTGATCCTCCATATGTGGCCTGCCGT...TAGGCTACATAATTTCCAGGTAGCCACTCTGGAAAGATCAGACAAGATCTTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
||
| 3UTR-3UTR CCA 90 bp | GTAGTGAGGTTTTTCTCTCAGCCCTTGTTTCAAGGGCTCCACAGCACCATGGATGTAAAGCGCTCAATATaGATCATGGACAGAAGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: VVRFFSQPLFQGLHSTMDVKRSI*IMDRRF Trigger: GAACCTTCTGTCCATGATCCATATTGAGCGCTTTAC...ATCCATGGTGCTGTGGAGCCCTTGAAACAAGGGCTGAGAGAAAAACCTCACTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
||
| 3UTR-3UTR TCA 90 bp | CATAACACCTTATGTAGAACATTCCAGGCCTCTTGCAGTTCATACCAAAAATCCCCCATAGCTTACCAATaGGAGAGCATTGGCCCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: HNTLCRTFQASCSSYQKSPIAYQ*ESIGPE Trigger: CTCAGGGCCAATGCTCTCTCATTGGTAAGCTATGGG...GGATTTTTGGTATGAACTGCAAGAGGCCTGGAATGTTCTACATAAGGTGTTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| 3UTR-3UTR TCA 90 bp | GTAGTGAGGTTTTTCTCTCAGCCCTTGTTTCAAGGGCTCCACAGCACCATGGATATGACATACAGGAGTTaGAATTTGGTGACAGTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: VVRFFSQPLFQGLHSTMDMTYRS*NLVTVV Trigger: CACAACTGTCACCAAATTTCAACTCCTGTATGTCAT...ATCCATGGTGCTGTGGAGCCCTTGAAACAAGGGCTGAGAGAAAAACCTCACTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
||
| 3UTR-3UTR TCA 90 bp | AGCAGTATTATGACTCATGAAGTTGCTCATCTGTCCTTGCTGGATCTGAGCCAGAGACAAGATCTTGTCTaGTCTTTCCAGAGTGGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: SSIMTHEVAHLSLLDLSQRQDLV*SFQSGY Trigger: GTAGCCACTCTGGAAAGATCAGACAAGATCTTGTCT...CTGGCTCAGATCCAGCAAGGACAGATGAGCAACTTCATGAGTCATAATACTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| 3UTR-3UTR GCA 90 bp | GCTGTCAGTCTAATATTCCTTCAGGGCTGCATCTACTCATCAGAAGTAAAACTAACTAAATCAATGCCCTaGCCAACCTCCCCTCCCACT | + |
|
Preference number: 2 (lower is better) Translates to: AVSLIFLQGCIYSSEVKLTKSMP*PTSPPT Trigger: AGTGGGAGGGGAGGTTGGGCAGGGCATTGATTTAGT...TAGTTTTACTTCTGATGAGTAGATGCAGCCCTGAAGGAATATTAGACTGACAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
||
| 3UTR-3UTR CCA 90 bp | GGAGAGGGACACTCTATACACAATAAGATCCCAAAGACACAGCAACATTCGGATTCAAGTAGCTGGACTTaGTCAGAGGGTCAGAGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: GEGHSIHNKIPKTQQHSDSSSWT*SEGQRK Trigger: TTTCCTCTGACCCTCTGACCAAGTCCAGCTACTTGA...ATCCGAATGTTGCTGTGTCTTTGGGATCTTATTGTGTATAGAGTGTCCCTCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCAGTATTATGACTCATGAAGTTGCTCATCTGTCCTTGCTGGATCTGAGCCAGTCCAGAGTGGCTACCTaGAAATTATGTAGCCTAAAT | + |
|
Preference number: 2 (lower is better) Translates to: SSIMTHEVAHLSLLDLSQSRVAT*KLCSLN Trigger: ATTTAGGCTACATAATTTCCAGGTAGCCACTCTGGA...CTGGCTCAGATCCAGCAAGGACAGATGAGCAACTTCATGAGTCATAATACTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| 3UTR-3UTR TCA 90 bp | GCATCCTATAGAGAAATGATCACTAATGGTTTGTTACAACTGGTATCCTGGATTCCCAGTCGAATTCCTTaGAAAGCCAGAAGCTCACCT | + |
|
Preference number: 2 (lower is better) Translates to: ASYREMITNGLLQLVSWIPSRIP*KARSSP Trigger: AGGTGAGCTTCTGGCTTTTCAAGGAATTCGACTGGG...AATCCAGGATACCAGTTGTAACAAACCATTAGTGATCATTTCTCTATAGGATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGGAGAGGGACACTCTATACACAATAAGATCCCAAAGACACAGCAACATTCGGCTGATCTTTCCAGAGTaGCTACCTGGAAATTATGTA | + |
|
Preference number: 2 (lower is better) Translates to: KERDTLYTIRSQRHSNIRLIFPE*LPGNYV Trigger: TACATAATTTCCAGGTAGCCACTCTGGAAAGATCAG...CCGAATGTTGCTGTGTCTTTGGGATCTTATTGTGTATAGAGTGTCCCTCTCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
||
| 3UTR-3UTR CCA 90 bp | ATAAATAATGACATACAGGAGTTGAAATTTGGTGACAGTTGTGGCTTGTCCAGGCTTCTGTGTCCAAGGTaGCAATGTCTAAGGGCATCA | + |
|
Preference number: 2 (lower is better) Translates to: INNDIQELKFGDSCGLSRLLCPR*QCLRAS Trigger: TGATGCCCTTAGACATTGCCACCTTGGACACAGAAG...CCTGGACAAGCCACAACTGTCACCAAATTTCAACTCCTGTATGTCATTATTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| 3UTR-3UTR CCA 90 bp | GACAAGATCTTGTCTGATCTTTCCAGAGTGGCTACCTGGAAATTATGTAGCCTAGATGAGTGTCACAATTaGCATAGAAATCCCAATGGC | + |
|
Preference number: 2 (lower is better) Translates to: DKILSDLSRVATWKLCSLDECHN*HRNPNG Trigger: GCCATTGGGATTTCTATGCCAATTGTGACACTCATC...TAGGCTACATAATTTCCAGGTAGCCACTCTGGAAAGATCAGACAAGATCTTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
||
| 3UTR-3UTR CCA 90 bp | ATAAATAATGACATACAGGAGTTGAAATTTGGTGACAGTTGTGGCTTGTCCAGGTTGATGAAGCAAAGATaGATGCATTTAGGCCCCCGA | + |
|
Preference number: 2 (lower is better) Translates to: INNDIQELKFGDSCGLSRLMKQR*MHLGPR Trigger: TCGGGGGCCTAAATGCATCCATCTTTGCTTCATCAA...CCTGGACAAGCCACAACTGTCACCAAATTTCAACTCCTGTATGTCATTATTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
||
| 3UTR-3UTR TCA 90 bp | GCATCCTATAGAGAAATGATCACTAATGGTTTGTTACAACTGGTATCCTGGATTAACTACAAAGAGCTGTaGATCAAGAGCCAGAGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: ASYREMITNGLLQLVSWINYKEL*IKSQSC Trigger: ACAGCTCTGGCTCTTGATTCACAGCTCTTTGTAGTT...AATCCAGGATACCAGTTGTAACAAACCATTAGTGATCATTTCTCTATAGGATGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
||
| 3UTR-3UTR GCA 90 bp | GCATCCTATAGAGAAATGATCACTAATGGTTTGTTACAACTGGTATCCTGGATTGTTAGAGGACTTTCATaGCTAGATCCTCAACAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: ASYREMITNGLLQLVSWIVRGLS*LDPQQS Trigger: AGACTGTTGAGGATCTAGGCATGAAAGTCCTCTAAC...AATCCAGGATACCAGTTGTAACAAACCATTAGTGATCATTTCTCTATAGGATGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
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| 3UTR-3UTR CCA 90 bp | ATAAATAATGACATACAGGAGTTGAAATTTGGTGACAGTTGTGGCTTGTCCAGGCTGATCTTTCCAGAGTaGCTACCTGGAAATTATGTA | + |
|
Preference number: 2 (lower is better) Translates to: INNDIQELKFGDSCGLSRLIFPE*LPGNYV Trigger: TACATAATTTCCAGGTAGCCACTCTGGAAAGATCAG...CCTGGACAAGCCACAACTGTCACCAAATTTCAACTCCTGTATGTCATTATTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
||
| 3UTR CAA 90 bp | CTTCAAAATAGCAGTATTATGACTCATGAAGTTGCTCATCTGTCCTaGCTGGATCTGAGCCAGATGATAATAACATGTGACTTATCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: LQNSSIMTHEVAHLS*LDLSQMIITCDLSV Trigger: TACAGATAAGTCACATGTTATTATCATCTGGCTCAGATCCAGCAAGGACAGATGAGCAACTTCATGAGTCATAATACTGCTATTTTGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| 3UTR-3UTR TCA 90 bp | TTTGTGAGTCCATACATAGCCAATCTTGCACAGGCTCTTAAAGATAACAAACTAATGACATACAGGAGTTaGAATTTGGTGACAGTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: FVSPYIANLAQALKDNKLMTYRS*NLVTVV Trigger: CACAACTGTCACCAAATTTCAACTCCTGTATGTCAT...TAGTTTGTTATCTTTAAGAGCCTGTGCAAGATTGGCTATGTATGGACTCACAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| 3UTR-3UTR CCA 90 bp | ATAAATAATGACATACAGGAGTTGAAATTTGGTGACAGTTGTGGCTTGTCCAGGGGGCAAATTCCTTTCTaGGTTTTTGATTTCTTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: INNDIQELKFGDSCGLSRGQIPF*VFDFFC Trigger: ACAGAAGAAATCAAAAACCCAGAAAGGAATTTGCCC...CCTGGACAAGCCACAACTGTCACCAAATTTCAACTCCTGTATGTCATTATTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
||
| 3UTR GCA 72 bp | ATCCTCAACAGTCTGCTTCCCATTAAGCTCACTGTCTaGTTGAGCCTGAAGTTCCGGGGAGGGAGGGAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: ILNSLLPIKLTV*LSLKFRGGREC Trigger: ACACTCCCTCCCTCCCCGGAACTTCAGGCTCAAGCAGACAGTGAGCTTAATGGGAAGCAGACTGTTGAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
||
| 3UTR CCA 72 bp | AACAGTAACGCAGGCACGGGTGTAAAGCGCTCAATATaGATCATGGACAGAAGGTTCGGGAGGTGGCCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: NSNAGTGVKRSI*IMDRRFGRWPS Trigger: TGAGGGCCACCTCCCGAACCTTCTGTCCATGATCCATATTGAGCGCTTTACACCCGTGCCTGCGTTACTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
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| 3UTR-3UTR CAA 90 bp | CAGTTGTGGCTTGTCCAGGTAGTAGAGACGCTCCACTCAGCTGGAGTAGTGAGGGGAGTGTTGTTCCTCTaGTGGAATTCAGGAAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: QLWLVQVVETLHSAGVVRGVLFL*WNSGRR Trigger: CCTCCTTCCTGAATTCCACAAGAGGAACAACACTCC...CCTCACTACTCCAGCTGAGTGGAGCGTCTCTACTACCTGGACAAGCCACAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCCTTGTTTCAAGGGCTCCACAGCACCATGGATTCAGCTAGGAAGGGCACAGGAGTGTTGTTCCTCTaGTGGAATTCAGGAAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: QPLFQGLHSTMDSARKGTGVLFL*WNSGRR Trigger: CCTCCTTCCTGAATTCCACAAGAGGAACAACACTCC...TGTGCCCTTCCTAGCTGAATCCATGGTGCTGTGGAGCCCTTGAAACAAGGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGTTGTGGCTTGTCCAGGTAGTAGAGACGCTCCACTCAGCTGGAGTAGTGAGGGGAGGGAGGGAGTGTaGTTCCTCTTGTGGAATTCA | + |
|
Preference number: 3 (lower is better) Translates to: TVVACPGSRDAPLSWSSEGREGV*FLLWNS Trigger: TGAATTCCACAAGAGGAACAACACTCCCTCCCTCCC...CTCACTACTCCAGCTGAGTGGAGCGTCTCTACTACCTGGACAAGCCACAACTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
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| 3UTR TCA 72 bp | CCTCCTTGCCTGAGAATCCTGACCATACTGCTAATGTaGCCTAAGCAAAGTCAGACAGGCAGCCCCTCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: PPCLRILTILLM*PKQSQTGSPSS Trigger: TGAGGAGGGGCTGCCTGTCTGACTTTGCTTAGGTCACATTAGCAGTATGGTCAGGATTCTCAGGCAAGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
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| 3UTR CCA 72 bp | GAAGTTCCGGGGAGGGAGGGAGTGTTGTTCCTCTTGTaGAATTCAGGAAGGAGGCACACATTGATCCCATGT | + |
|
Preference number: 3 (lower is better) Translates to: EVPGREGVLFLL*NSGRRHTLIPC Trigger: ACATGGGATCAATGTGTGCCTCCTTCCTGAATTCCACAAGAGGAACAACACTCCCTCCCTCCCCGGAACTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
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| 3UTR CCA 72 bp | CAGCACATTCCTAATAAAGAGTGGTCTCCGGGACTCTaGCAGGTATACACCCAAGAAGTAGACAGGGACCCC | + |
|
Preference number: 3 (lower is better) Translates to: QHIPNKEWSPGL*QVYTQEVDRDP Trigger: GGGGTCCCTGTCTACTTCTTGGGTGTATACCTGCCAGAGTCCCGGAGACCACTCTTTATTAGGAATGTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
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| 3UTR-3UTR CAA 90 bp | AGCACCATGGATTCAGCTAGGAAGGGCACAATCAAGTGGCCCAGTCGAATTCCTTGCGACCACAGCCTTTaGGGCTTCAGGGAATGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: STMDSARKGTIKWPSRIPCDHSL*GFRECH Trigger: ATGACATTCCCTGAAGCCCAAAAGGCTGTGGTCGCA...AGGAATTCGACTGGGCCACTTGATTGTGCCCTTCCTAGCTGAATCCATGGTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGCACCTTGCTGTTCATGCCACCCAACAAACAAAAAGGGGAACACAACGCTCTTGCGACCACAGCCTTTaGGGCTTCAGGGAATGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: QHLAVHATQQTKRGTQRSCDHSL*GFRECH Trigger: ATGACATTCCCTGAAGCCCAAAAGGCTGTGGTCGCA...AGAGCGTTGTGTTCCCCTTTTTGTTTGTTGGGTGGCATGAACAGCAAGGTGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
||
| 3UTR TCA 72 bp | GGCTGGCCTAATTGGTATCTTCCCATAGCTTACCAATaGGAGAGCATTGGCCCTGAGCCCCCTTACAGAATG | + |
|
Preference number: 3 (lower is better) Translates to: GWPNWYLPIAYQ*ESIGPEPPYRM Trigger: CATTCTGTAAGGGGGCTCAGGGCCAATGCTCTCTCATTGGTAAGCTATGGGAAGATACCAATTAGGCCAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
||
| 3UTR TCA 72 bp | AGGAAGGGCACAATCAAGTGGCCCAGTCGAATTCCTTaGAAAGCCAGAAGCTCACCTCCTTGCCTGAGAATC | + |
|
Preference number: 3 (lower is better) Translates to: RKGTIKWPSRIP*KARSSPPCLRI Trigger: GATTCTCAGGCAAGGAGGTGAGCTTCTGGCTTTTCAAGGAATTCGACTGGGCCACTTGATTGTGCCCTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
||
| 3UTR TCA 72 bp | AGCAGGACAGAGCAACAGCAATGGGGATGGTCCAACTaGACATGCCGAATGTCTGGTCAGCAAATGTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: SRTEQQQWGWSN*TCRMSGQQMSQ Trigger: CTGTGACATTTGCTGACCAGACATTCGGCATGTTCAGTTGGACCATCCCCATTGCTGTTGCTCTGTCCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
||
| 3UTR CCA 72 bp | CCAAGAGGCTCCTTTAATTCAGAAGGTTTAGGGAACTaGTCTTTGGTGGCTGCGACCACAGCCTTTTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PRGSFNSEGLGN*SLVAATTAFWA Trigger: AGCCCAAAAGGCTGTGGTCGCAGCCACCAAAGACCAGTTCCCTAAACCTTCTGAATTAAAGGAGCCTCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
||
| 3UTR CCA 72 bp | GTGGCTTGTCCAGGTAGTAGAGACGCTCCACTCAGCTaGAGTAGTGAGGTTTTTCTCTCAGCCCTTGTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: VACPGSRDAPLS*SSEVFLSALVS Trigger: TGAAACAAGGGCTGAGAGAAAAACCTCACTACTCCAGCTGAGTGGAGCGTCTCTACTACCTGGACAAGCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
||
| 3UTR CCA 72 bp | CATTTTCTGAGACTTCAATCTCACCTGCCCAGCCCTTaGACAAGAGAAGGCAAGCGGGTATACTGTCCCATG | + |
|
Preference number: 3 (lower is better) Translates to: HFLRLQSHLPSP*TREGKRVYCPM Trigger: CATGGGACAGTATACCCGCTTGCCTTCTCTTGTCCAAGGGCTGGGCAGGTGAGATTGAAGTCTCAGAAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| 3UTR CCA 72 bp | CCAGAATTAGTTTCTACCGTTTACCAGGAGCGAGGCTaGGGTGGAAGCTGTTTTCTCCCACAGTCTTCATCG | + |
|
Preference number: 3 (lower is better) Translates to: PELVSTVYQERG*GGSCFLPQSSS Trigger: CGATGAAGACTGTGGGAGAAAACAGCTTCCACCCCAGCCTCGCTCCTGGTAAACGGTAGAAACTAATTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| 3UTR CCA 72 bp | GCAATGGGGATGGTCCAACTGAACATGCCGAATGTCTaGTCAGCAAATGTCACAGCCACAGCGTCACTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: AMGMVQLNMPNV*SANVTATASLL Trigger: TAAGAGTGACGCTGTGGCTGTGACATTTGCTGACCAGACATTCGGCATGTTCAGTTGGACCATCCCCATTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
||
| 3UTR GCA 72 bp | TGTGTAGACACACTGCTCACAGAGATTCACGCCTATTaGTTTGGCTTTAACTGGCAGCCTAGTCCGATCACC | + |
|
Preference number: 3 (lower is better) Translates to: CVDTLLTEIHAY*FGFNWQPSPIT Trigger: GGTGATCGGACTAGGCTGCCAGTTAAAGCCAAAGCAATAGGCGTGAATCTCTGTGAGCAGTGTGTCTACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| 3UTR CCA 72 bp | GAGAGCCCACGAAAAACAACCTTGATGAAGCAAAGATaGATGCATTTAGGCCCCCGAAGCAGGACAGAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: ESPRKTTLMKQR*MHLGPRSRTEQ Trigger: TTGCTCTGTCCTGCTTCGGGGGCCTAAATGCATCCATCTTTGCTTCATCAAGGTTGTTTTTCGTGGGCTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
||
| 3UTR CCA 72 bp | TCTGGTGACAGTAGCCAGCACATTCCTAATAAAGAGTaGTCTCCGGGACTCTGGCAGGTATACACCCAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SGDSSQHIPNKE*SPGLWQVYTQE Trigger: TTCTTGGGTGTATACCTGCCAGAGTCCCGGAGACCACTCTTTATTAGGAATGTGCTGGCTACTGTCACCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGAGGGACACTCTATACACAATAAGATCCCAAAGACACAGCAACATTCGGATACCAATGAGAGAGCATaGGCCCTGAGCCCCCTTACA | + |
|
Preference number: 3 (lower is better) Translates to: GEGHSIHNKIPKTQQHSDTNERA*ALSPLT Trigger: TGTAAGGGGGCTCAGGGCCAATGCTCTCTCATTGGT...ATCCGAATGTTGCTGTGTCTTTGGGATCTTATTGTGTATAGAGTGTCCCTCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
||
| 3UTR TCA 72 bp | CTTGGACAAGAGAAGGCAAGCGGGTATACTGTCCCATaGCCCAAGCATGTAAACAAAGCTTGGTGCTTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LGQEKASGYTVP*PKHVNKAWCFQ Trigger: CTGAAAGCACCAAGCTTTGTTTACATGCTTGGGTCATGGGACAGTATACCCGCTTGCCTTCTCTTGTCCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| 3UTR CCA 72 bp | ATTAGTTTCTACCGTTTACCAGGAGCGAGGCTGGGGTaGAAGCTGTTTTCTCCCACAGTCTTCATCGATCTT | + |
|
Preference number: 3 (lower is better) Translates to: ISFYRLPGARLG*KLFSPTVFIDL Trigger: AAGATCGATGAAGACTGTGGGAGAAAACAGCTTCCACCCCAGCCTCGCTCCTGGTAAACGGTAGAAACTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| 3UTR CCA 72 bp | GGCCACGTTGGTCAGGATGTAGATGAGTGTCACAATTaGCATAGAAATCCCAATGGCCAAGGGCAAATTCCT | + |
|
Preference number: 3 (lower is better) Translates to: GHVGQDVDECHN*HRNPNGQGQIP Trigger: AGGAATTTGCCCTTGGCCATTGGGATTTCTATGCCAATTGTGACACTCATCTACATCCTGACCAACGTGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
||
| 3UTR-3UTR CAA 90 bp | AGACAGATGCACAAGTACCAAGCATTTTCTGAGACTTCAATCTCACCTGCCCAGTTTTTCTCTCAGCCCTaGTTTCAAGGGCTCCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: RQMHKYQAFSETSISPAQFFSQP*FQGLHS Trigger: GCTGTGGAGCCCTTGAAACAAGGGCTGAGAGAAAAA...CTGGGCAGGTGAGATTGAAGTCTCAGAAAATGCTTGGTACTTGTGCATCTGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| 3UTR-3UTR CAA 90 bp | CTTGCTGTTCATGCCACCCAACAAACAAAAAGGGGAACACAACGCTCTCCTCAAATACGTGAATGTGTCTaGTACTCGTGTGCCCCACTT | + |
|
Preference number: 3 (lower is better) Translates to: LAVHATQQTKRGTQRSPQIRECV*YSCAPL Trigger: AAGTGGGGCACACGAGTACAAGACACATTCACGTAT...TTGAGGAGAGCGTTGTGTTCCCCTTTTTGTTTGTTGGGTGGCATGAACAGCAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTGTCAGTCTAATATTCCTTCAGGGCTGCATCTACTCATCAGAAGTAAAACTAACCAATGAGAGAGCATaGGCCCTGAGCCCCCTTACA | + |
|
Preference number: 3 (lower is better) Translates to: AVSLIFLQGCIYSSEVKLTNERA*ALSPLT Trigger: TGTAAGGGGGCTCAGGGCCAATGCTCTCTCATTGGT...TAGTTTTACTTCTGATGAGTAGATGCAGCCCTGAAGGAATATTAGACTGACAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGCACCTTGCTGTTCATGCCACCCAACAAACAAAAAGGGGAACACAACGCTCTCCTCAAGGAAGAATTTaGAGCCATAGGAAGAAATGG | + |
|
Preference number: 3 (lower is better) Translates to: QHLAVHATQQTKRGTQRSPQGRI*SHRKKW Trigger: CCATTTCTTCCTATGGCTCAAAATTCTTCCTTGAGG...AGAGCGTTGTGTTCCCCTTTTTGTTTGTTGGGTGGCATGAACAGCAAGGTGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
||
| 3UTR GCA 72 bp | CAGTTTAACAAGGCCCATGATAATGATGGCAATGAGTaGCAGGACCTTGGCATACGTGAATGTGTCTTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: QFNKAHDNDGNE*QDLGIRECVLY Trigger: GTACAAGACACATTCACGTATGCCAAGGTCCTGGCACTCATTGCCATCATTATCATGGGCCTTGTTAAACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
||
| 3UTR CCA 72 bp | CTCACAGAGATTCACGCCTATTGCTTTGGCTTTAACTaGCAGCCTAGTCCGATCACCAGAATTAGTTTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: LTEIHAYCFGFN*QPSPITRISFY Trigger: GTAGAAACTAATTCTGGTGATCGGACTAGGCTGCCAGTTAAAGCCAAAGCAATAGGCGTGAATCTCTGTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| 3UTR-3UTR CAA 90 bp | ATAAATAATGACATACAGGAGTTGAAATTTGGTGACAGTTGTGGCTTGTCCAGGGTTGCTCATCTGTCCTaGCTGGATCTGAGCCAGATG | + |
|
Preference number: 3 (lower is better) Translates to: INNDIQELKFGDSCGLSRVAHLS*LDLSQM Trigger: CATCTGGCTCAGATCCAGCAAGGACAGATGAGCAAC...CCTGGACAAGCCACAACTGTCACCAAATTTCAACTCCTGTATGTCATTATTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| 3UTR-3UTR CAA 90 bp | GCATCCTATAGAGAAATGATCACTAATGGTTTGTTACAACTGGTATCCTGGATTGGGAGGGAGGGAGTGTaGTTCCTCTTGTGGAATTCA | + |
|
Preference number: 3 (lower is better) Translates to: ASYREMITNGLLQLVSWIGREGV*FLLWNS Trigger: TGAATTCCACAAGAGGAACAACACTCCCTCCCTCCC...AATCCAGGATACCAGTTGTAACAAACCATTAGTGATCATTTCTCTATAGGATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGTGAGTCCATACATAGCCAATCTTGCACAGGCTCTTAAAGATAACAAACTAGGAAGGAGGCACACATaGATCCCATGTCAGTTACAC | + |
|
Preference number: 3 (lower is better) Translates to: FVSPYIANLAQALKDNKLGRRHT*IPCQLH Trigger: GTGTAACTGACATGGGATCAATGTGTGCCTCCTTCC...TAGTTTGTTATCTTTAAGAGCCTGTGCAAGATTGGCTATGTATGGACTCACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| 3UTR GCA 72 bp | AGAGCCAGAGCTGTCAGTCTAATATTCCTTCAGGGCTaGATCTACTCATCAGAAGTAAAACTAAATCAATGC | + |
|
Preference number: 3 (lower is better) Translates to: RARAVSLIFLQG*IYSSEVKLNQC Trigger: GCATTGATTTAGTTTTACTTCTGATGAGTAGATGCAGCCCTGAAGGAATATTAGACTGACAGCTCTGGCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
||
| 3UTR GCA 72 bp | GTGACAACTGATAAATCAGGTTATCTACCTGAATTTTaGATAACACCTTATGTAGAACATTCCAGGCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: VTTDKSGYLPEF*ITPYVEHSRPL Trigger: AAGAGGCCTGGAATGTTCTACATAAGGTGTTATGCAAAATTCAGGTAGATAACCTGATTTATCAGTTGTCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| 3UTR-3UTR CAA 90 bp | TTTGTGAGTCCATACATAGCCAATCTTGCACAGGCTCTTAAAGATAACAAACTAAATGACATACAGGAGTaGAAATTTGGTGACAGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: FVSPYIANLAQALKDNKLNDIQE*KFGDSC Trigger: ACAACTGTCACCAAATTTCAACTCCTGTATGTCATT...TAGTTTGTTATCTTTAAGAGCCTGTGCAAGATTGGCTATGTATGGACTCACAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| CDS-3UTR GCA 90 bp | ACAGTTGTGGCTTGTCCAGGTAGTAGAGACGCTCCACTCAGCTGGAGTAGTGAGGGTGGTCCCCAGTTCTaGATAGCAAAGGGCACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TVVACPGSRDAPLSWSSEGGPQF*IAKGTH Trigger: GTGGGTGCCCTTTGCTATGCAGAACTGGGGACCACC...CTCACTACTCCAGCTGAGTGGAGCGTCTCTACTACCTGGACAAGCCACAACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| CDS-3UTR TCA 90 bp | CAGTTGTGGCTTGTCCAGGTAGTAGAGACGCTCCACTCAGCTGGAGTAGTGAGGAAGGGTGTCCCAACCTaGGTAAGAGAAGAGGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QLWLVQVVETLHSAGVVRKGVPT*VREEGR Trigger: TCTGCCCTCTTCTCTTACTCAGGTTGGGACACCCTT...CCTCACTACTCCAGCTGAGTGGAGCGTCTCTACTACCTGGACAAGCCACAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| CDS-3UTR TCA 90 bp | CAGCCCTTGTTTCAAGGGCTCCACAGCACCATGGATTCAGCTAGGAAGGGCACAGTGTCATGGTGCAATTaGACAGTAACGCAGGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: QPLFQGLHSTMDSARKGTVSWCN*TVTQAR Trigger: CCGTGCCTGCGTTACTGTTCAATTGCACCATGACAC...TGTGCCCTTCCTAGCTGAATCCATGGTGCTGTGGAGCCCTTGAAACAAGGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| CDS-3UTR CCA 90 bp | GTAGTAGAGACGCTCCACTCAGCTGGAGTAGTGAGGTTTTTCTCTCAGCCCTTGGGAGAAGATGGTAGGTaGGTGTGGGGCTCCCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VVETLHSAGVVRFFSQPLGEDGR*VWGSQA Trigger: AGCTTGGGAGCCCCACACCCACCTACCATCTTCTCC...CAAGGGCTGAGAGAAAAACCTCACTACTCCAGCTGAGTGGAGCGTCTCTACTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
||
| CDS-3UTR CCA 90 bp | GGTGGCCCTCACGAGAGCCCACGAAAAACAACCTTGATGAAGCAAAGATGGATGGGAGAAGATGGTAGGTaGGTGTGGGGCTCCCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGPHESPRKTTLMKQRWMGEDGR*VWGSQA Trigger: AGCTTGGGAGCCCCACACCCACCTACCATCTTCTCC...CATCCATCTTTGCTTCATCAAGGTTGTTTTTCGTGGGCTCTCGTGAGGGCCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
||
| 3UTR CAA 72 bp | CCTGAAGTTCCGGGGAGGGAGGGAGTGTTGTTCCTCTaGTGGAATTCAGGAAGGAGGCACACATTGATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PEVPGREGVLFL*WNSGRRHTLIP Trigger: TGGGATCAATGTGTGCCTCCTTCCTGAATTCCACAAGAGGAACAACACTCCCTCCCTCCCCGGAACTTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
||
| 3UTR CAA 72 bp | AGGGAACTGGTCTTTGGTGGCTGCGACCACAGCCTTTaGGGCTTCAGGGAATGTCATCTCTGGCTTCTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RELVFGGCDHSL*GFRECHLWLLV Trigger: GACTAGAAGCCAGAGATGACATTCCCTGAAGCCCAAAAGGCTGTGGTCGCAGCCACCAAAGACCAGTTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
||
| CDS-3UTR TCA 90 bp | GTCCAACTGAACATGCCGAATGTCTGGTCAGCAAATGTCACAGCCACAGCGTCAGTTTCTGGAGACCCTTaGGATGGTGAGCCGGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: VQLNMPNVWSANVTATASVSGDP*DGEPAS Trigger: AGATGCCGGCTCACCATCTCAAGGGTCTCCAGAAAC...TGACGCTGTGGCTGTGACATTTGCTGACCAGACATTCGGCATGTTCAGTTGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
||
| CDS-3UTR TCA 90 bp | ACAGTTGTGGCTTGTCCAGGTAGTAGAGACGCTCCACTCAGCTGGAGTAGTGAGCCTTTAAAGGCGTCCTaGAAGTGCTCAGTGTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TVVACPGSRDAPLSWSSEPLKAS*KCSVCP Trigger: GGGACACACTGAGCACTTTCAGGACGCCTTTAAAGG...CTCACTACTCCAGCTGAGTGGAGCGTCTCTACTACCTGGACAAGCCACAACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| 3UTR CAA 72 bp | GGCTCCTTTAATTCAGAAGGTTTAGGGAACTGGTCTTaGGTGGCTGCGACCACAGCCTTTTGGGCTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSFNSEGLGNWS*VAATTAFWASG Trigger: CCCTGAAGCCCAAAAGGCTGTGGTCGCAGCCACCAAAGACCAGTTCCCTAAACCTTCTGAATTAAAGGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
||
| CDS-3UTR TCA 90 bp | CAGGTAGTAGAGACGCTCCACTCAGCTGGAGTAGTGAGGTTTTTCTCTCAGCCCGGACCTTGGCATACGTaGATGTGTCTTGTACTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: QVVETLHSAGVVRFFSQPGPWHT*MCLVLV Trigger: CACGAGTACAAGACACATTCACGTATGCCAAGGTCC...GGGCTGAGAGAAAAACCTCACTACTCCAGCTGAGTGGAGCGTCTCTACTACCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| CDS-3UTR GCA 90 bp | CAGTTGTGGCTTGTCCAGGTAGTAGAGACGCTCCACTCAGCTGGAGTAGTGAGGATCTCCTTCTTCAGCTaGATCGTTTCTGGAGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: QLWLVQVVETLHSAGVVRISFFS*IVSGDP Trigger: AGGGTCTCCAGAAACGATGCAGCTGAAGAAGGAGAT...CCTCACTACTCCAGCTGAGTGGAGCGTCTCTACTACCTGGACAAGCCACAACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
||
| CDS-3UTR CCA 90 bp | AGCACCATGGATTCAGCTAGGAAGGGCACAATCAAGTGGCCCAGTCGAATTCCTTGTGCTGGTTGGCTTTaGGGAGAAGATGGTAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: STMDSARKGTIKWPSRIPCAGWL*GEDGRW Trigger: CCACCTACCATCTTCTCCCCAAAGCCAACCAGCACA...AGGAATTCGACTGGGCCACTTGATTGTGCCCTTCCTAGCTGAATCCATGGTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
||
| CDS-3UTR CCA 90 bp | CAGCCCTTGTTTCAAGGGCTCCACAGCACCATGGATTCAGCTAGGAAGGGCACATTGATGAAGCAAAGATaGATGCATTTAGGCCCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: QPLFQGLHSTMDSARKGTLMKQR*MHLGPR Trigger: TCGGGGGCCTAAATGCATCCATCTTTGCTTCATCAA...TGTGCCCTTCCTAGCTGAATCCATGGTGCTGTGGAGCCCTTGAAACAAGGGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| 3UTR CAA 72 bp | AGGCCCATGATAATGATGGCAATGAGTGCCAGGACCTaGGCATACGTGAATGTGTCTTGTACTCGTGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RPMIMMAMSART*AYVNVSCTRVP Trigger: GGGCACACGAGTACAAGACACATTCACGTATGCCAAGGTCCTGGCACTCATTGCCATCATTATCATGGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
||
| CDS-3UTR TCA 90 bp | AGACAGATGCACAAGTACCAAGCATTTTCTGAGACTTCAATCTCACCTGCCCAGCTCGTGTGCCCCACTTaGCGTAGGCACAGTTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: RQMHKYQAFSETSISPAQLVCPT*RRHSSQ Trigger: TTGTGAACTGTGCCTACGTCAAGTGGGGCACACGAG...CTGGGCAGGTGAGATTGAAGTCTCAGAAAATGCTTGGTACTTGTGCATCTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| CDS-3UTR CCA 90 bp | AGCACCATGGATTCAGCTAGGAAGGGCACAATCAAGTGGCCCAGTCGAATTCCTAACATGCCGAATGTCTaGTCAGCAAATGTCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: STMDSARKGTIKWPSRIPNMPNV*SANVTA Trigger: GGCTGTGACATTTGCTGACCAGACATTCGGCATGTT...AGGAATTCGACTGGGCCACTTGATTGTGCCCTTCCTAGCTGAATCCATGGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| CDS-3UTR CCA 90 bp | CAGGTAGTAGAGACGCTCCACTCAGCTGGAGTAGTGAGGTTTTTCTCTCAGCCCCAAAAGCAAAGCTTCTaGGTGACTCTGGTGACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QVVETLHSAGVVRFFSQPQKQSF*VTLVTV Trigger: TACTGTCACCAGAGTCACCCAGAAGCTTTGCTTTTG...GGGCTGAGAGAAAAACCTCACTACTCCAGCTGAGTGGAGCGTCTCTACTACCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| CDS-3UTR TCA 90 bp | AAAAATCAAGTAGCTGGACTTGGTCAGAGGGTCAGAGGAAAACTTCCCATGAAGGTTTCTGGAGACCCTTaGGATGGTGAGCCGGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: KNQVAGLGQRVRGKLPMKVSGDP*DGEPAS Trigger: AGATGCCGGCTCACCATCTCAAGGGTCTCCAGAAAC...CTTCATGGGAAGTTTTCCTCTGACCCTCTGACCAAGTCCAGCTACTTGATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
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| CDS-3UTR TCA 90 bp | AAAGCTTGGTGCTTTCAGAAAATTAGTGACCACTTCCAGCAGAGTGGGCTTTTGAAAAGAGGCTCAGCTTaGGAGGTCGAGGCCAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KAWCFQKISDHFQQSGLLKRGSA*EVEASQ Trigger: CTGACTGGCCTCGACCTCTCAAGCTGAGCCTCTTTT...CAAAAGCCCACTCTGCTGGAAGTGGTCACTAATTTTCTGAAAGCACCAAGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| 3UTR CAA 72 bp | CAGTCGAATTCCTTGAAAAGCCAGAAGCTCACCTCCTaGCCTGAGAATCCTGACCATACTGCTAATGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: QSNSLKSQKLTS*PENPDHTANVT Trigger: GGTCACATTAGCAGTATGGTCAGGATTCTCAGGCAAGGAGGTGAGCTTCTGGCTTTTCAAGGAATTCGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
||
| CDS-3UTR CCA 90 bp | CAGCCCTTGTTTCAAGGGCTCCACAGCACCATGGATTCAGCTAGGAAGGGCACAGGGCAAATTCCTTTCTaGGTTTTTGATTTCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QPLFQGLHSTMDSARKGTGQIPF*VFDFFC Trigger: ACAGAAGAAATCAAAAACCCAGAAAGGAATTTGCCC...TGTGCCCTTCCTAGCTGAATCCATGGTGCTGTGGAGCCCTTGAAACAAGGGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| CDS-3UTR CCA 90 bp | AAAAATCAAGTAGCTGGACTTGGTCAGAGGGTCAGAGGAAAACTTCCCATGAAGTGGTCTCCGGGACTCTaGCAGGTATACACCCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KNQVAGLGQRVRGKLPMKWSPGL*QVYTQE Trigger: TTCTTGGGTGTATACCTGCCAGAGTCCCGGAGACCA...CTTCATGGGAAGTTTTCCTCTGACCCTCTGACCAAGTCCAGCTACTTGATTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| CDS-3UTR CCA 90 bp | AGACAGATGCACAAGTACCAAGCATTTTCTGAGACTTCAATCTCACCTGCCCAGTTACAGTGTGCTGGTTaGCTTTGGGGAGAAGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: RQMHKYQAFSETSISPAQLQCAG*LWGEDG Trigger: ACCATCTTCTCCCCAAAGCCAACCAGCACACTGTAA...CTGGGCAGGTGAGATTGAAGTCTCAGAAAATGCTTGGTACTTGTGCATCTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| CDS-3UTR CCA 90 bp | AGCAGTATTATGACTCATGAAGTTGCTCATCTGTCCTTGCTGGATCTGAGCCAGATTCCTAATAAAGAGTaGTCTCCGGGACTCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSIMTHEVAHLSLLDLSQIPNKE*SPGLWQ Trigger: CTGCCAGAGTCCCGGAGACCACTCTTTATTAGGAAT...CTGGCTCAGATCCAGCAAGGACAGATGAGCAACTTCATGAGTCATAATACTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| 3UTR CAA 72 bp | TTGTTCCTCTTGTGGAATTCAGGAAGGAGGCACACATaGATCCCATGTCAGTTACACAGCACCTTGCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LFLLWNSGRRHT*IPCQLHSTLLF Trigger: GAACAGCAAGGTGCTGTGTAACTGACATGGGATCAATGTGTGCCTCCTTCCTGAATTCCACAAGAGGAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
||
| CDS-3UTR CCA 90 bp | ATGTGTGCAACCAGGCCAGCTAAGATAAAAACACAATTCACTTATTGCATCCTAACGGCAGGCCACATATaGAGGATCACAGGTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: MCATRPAKIKTQFTYCILTAGHI*RITGGE Trigger: TTCCCCACCTGTGATCCTCCATATGTGGCCTGCCGT...TAGGATGCAATAAGTGAATTGTGTTTTTATCTTAGCTGGCCTGGTTGCACACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| CDS-3UTR CCA 90 bp | AAGGAGAGGGACACTCTATACACAATAAGATCCCAAAGACACAGCAACATTCGGGCTCAATATGGATCATaGACAGAAGGTTCGGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KERDTLYTIRSQRHSNIRAQYGS*TEGSGG Trigger: ACCTCCCGAACCTTCTGTCCATGATCCATATTGAGC...CCGAATGTTGCTGTGTCTTTGGGATCTTATTGTGTATAGAGTGTCCCTCTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| CDS-3UTR TCA 90 bp | ATAAATAATGACATACAGGAGTTGAAATTTGGTGACAGTTGTGGCTTGTCCAGGTGGGGATGGTCCAACTaGACATGCCGAATGTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: INNDIQELKFGDSCGLSRWGWSN*TCRMSG Trigger: ACCAGACATTCGGCATGTTCAGTTGGACCATCCCCA...CCTGGACAAGCCACAACTGTCACCAAATTTCAACTCCTGTATGTCATTATTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| CDS-3UTR GCA 90 bp | AAGGAGAGGGACACTCTATACACAATAAGATCCCAAAGACACAGCAACATTCGGTCTTCTTTTACAGTGTaGTGGTTGGCTTTGGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KERDTLYTIRSQRHSNIRSSFTV*WLALGR Trigger: TCTCCCCAAAGCCAACCAGCACACTGTAAAAGAAGA...CCGAATGTTGCTGTGTCTTTGGGATCTTATTGTGTATAGAGTGTCCCTCTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
||
| CDS-3UTR TCA 90 bp | GCATCCTATAGAGAAATGATCACTAATGGTTTGTTACAACTGGTATCCTGGATTTGCTCAGTGTGTCCCTaGCACAGTTTAACAAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ASYREMITNGLLQLVSWICSVCP*HSLTRP Trigger: GGGCCTTGTTAAACTGTGTCAGGGACACACTGAGCA...AATCCAGGATACCAGTTGTAACAAACCATTAGTGATCATTTCTCTATAGGATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| CDS-3UTR GCA 90 bp | ACAATTGGCATAGAAATCCCAATGGCCAAGGGCAAATTCCTTTCTGGGTTTTTGTCTTCTTTTACAGTGTaGTGGTTGGCTTTGGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TIGIEIPMAKGKFLSGFLSSFTV*WLALGR Trigger: TCTCCCCAAAGCCAACCAGCACACTGTAAAAGAAGA...CAAAAACCCAGAAAGGAATTTGCCCTTGGCCATTGGGATTTCTATGCCAATTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
||
| CDS-3UTR GCA 90 bp | GCTGTCAGTCTAATATTCCTTCAGGGCTGCATCTACTCATCAGAAGTAAAACTAATCTCCTTCTTCAGCTaGATCGTTTCTGGAGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: AVSLIFLQGCIYSSEVKLISFFS*IVSGDP Trigger: AGGGTCTCCAGAAACGATGCAGCTGAAGAAGGAGAT...TAGTTTTACTTCTGATGAGTAGATGCAGCCCTGAAGGAATATTAGACTGACAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
||
| CDS-3UTR CCA 90 bp | TTTGTGAGTCCATACATAGCCAATCTTGCACAGGCTCTTAAAGATAACAAACTATGTGCTGGTTGGCTTTaGGGAGAAGATGGTAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FVSPYIANLAQALKDNKLCAGWL*GEDGRW Trigger: CCACCTACCATCTTCTCCCCAAAGCCAACCAGCACA...TAGTTTGTTATCTTTAAGAGCCTGTGCAAGATTGGCTATGTATGGACTCACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| 3UTR CAA 72 bp | AGCAGTATTATGACTCATGAAGTTGCTCATCTGTCCTaGCTGGATCTGAGCCAGATGATAATAACATGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSIMTHEVAHLS*LDLSQMIITCD Trigger: GTCACATGTTATTATCATCTGGCTCAGATCCAGCAAGGACAGATGAGCAACTTCATGAGTCATAATACTGCT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| CDS-3UTR CCA 90 bp | GCATCCTATAGAGAAATGATCACTAATGGTTTGTTACAACTGGTATCCTGGATTGATGAGTGTCACAATTaGCATAGAAATCCCAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASYREMITNGLLQLVSWIDECHN*HRNPNG Trigger: GCCATTGGGATTTCTATGCCAATTGTGACACTCATC...AATCCAGGATACCAGTTGTAACAAACCATTAGTGATCATTTCTCTATAGGATGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
||
| CDS-3UTR CAA 90 bp | AGCACCATGGATTCAGCTAGGAAGGGCACAATCAAGTGGCCCAGTCGAATTCCTCCTGAGCCAATCATGTaGCCCACCACCAGGCTGACC | + |
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Preference number: 5 (lower is better) Translates to: STMDSARKGTIKWPSRIPPEPIM*PTTRLT Trigger: GGTCAGCCTGGTGGTGGGCAACATGATTGGCTCAGG...AGGAATTCGACTGGGCCACTTGATTGTGCCCTTCCTAGCTGAATCCATGGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
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| CDS TCA 90 bp | AGCAAGGAGATCTCCTTCTTCAGCTGCATCGTTTCTGGAGACCCTTaGGATGGTGAGCCGGCATCTTCTTTTACAGTGTGCTGGTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: SKEISFFSCIVSGDP*DGEPASSFTVCWLA Trigger: AGCCAACCAGCACACTGTAAAAGAAGATGCCGGCTCACCATCTCAAGGGTCTCCAGAAACGATGCAGCTGAAGAAGGAGATCTCCTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034378.5 ENSMUST00000211824.2 ENSMUST00000212377.2 ENSMUST00000212802.2 |
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| CDS-3UTR CAA 90 bp | GTCCAACTGAACATGCCGAATGTCTGGTCAGCAAATGTCACAGCCACAGCGTCATTTACAGTGTGCTGGTaGGCTTTGGGGAGAAGATGG | + |
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Preference number: 5 (lower is better) Translates to: VQLNMPNVWSANVTATASFTVCW*ALGRRW Trigger: CCATCTTCTCCCCAAAGCCAACCAGCACACTGTAAA...TGACGCTGTGGCTGTGACATTTGCTGACCAGACATTCGGCATGTTCAGTTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212377.2 |
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| CDS-3UTR CAA 90 bp | ACAGTTGTGGCTTGTCCAGGTAGTAGAGACGCTCCACTCAGCTGGAGTAGTGAGATACGTGAATGTGTCTaGTACTCGTGTGCCCCACTT | + |
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Preference number: 5 (lower is better) Translates to: TVVACPGSRDAPLSWSSEIRECV*YSCAPL Trigger: AAGTGGGGCACACGAGTACAAGACACATTCACGTAT...CTCACTACTCCAGCTGAGTGGAGCGTCTCTACTACCTGGACAAGCCACAACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
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| CDS GCA 90 bp | ACCCTGACACAGTTTAACAAGGCCCATGATAATGATGGCAATGAGTaGCAGGACCTTGGCATACGTGAATGTGTCTTGTACTCGTGTGCC | + |
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Preference number: 5 (lower is better) Translates to: TLTQFNKAHDNDGNE*QDLGIRECVLYSCA Trigger: GGCACACGAGTACAAGACACATTCACGTATGCCAAGGTCCTGGCACTCATTGCCATCATTATCATGGGCCTTGTTAAACTGTGTCAGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211824.2 |
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| CDS-3UTR CAA 90 bp | AAAAATCAAGTAGCTGGACTTGGTCAGAGGGTCAGAGGAAAACTTCCCATGAAGTTTACAGTGTGCTGGTaGGCTTTGGGGAGAAGATGG | + |
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Preference number: 5 (lower is better) Translates to: KNQVAGLGQRVRGKLPMKFTVCW*ALGRRW Trigger: CCATCTTCTCCCCAAAGCCAACCAGCACACTGTAAA...CTTCATGGGAAGTTTTCCTCTGACCCTCTGACCAAGTCCAGCTACTTGATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034378.5 ENSMUST00000212377.2 |
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| CDS-3UTR CAA 90 bp | GCTGTCAGTCTAATATTCCTTCAGGGCTGCATCTACTCATCAGAAGTAAAACTACCACGAAAAACAACCTaGATGAAGCAAAGATGGATG | + |
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Preference number: 5 (lower is better) Translates to: AVSLIFLQGCIYSSEVKLPRKTT*MKQRWM Trigger: CATCCATCTTTGCTTCATCAAGGTTGTTTTTCGTGG...TAGTTTTACTTCTGATGAGTAGATGCAGCCCTGAAGGAATATTAGACTGACAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034378.5 |
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| CDS TCA 72 bp | CTTCAGCTGCATCGTTTCTGGAGACCCTTGAGATGGTaGGCCGGCATCTTCTTTTACAGTGTGCTGGTTGGC | + |
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Preference number: 6 (lower is better) Translates to: LQLHRFWRPLRW*AGIFFYSVLVG Trigger: GCCAACCAGCACACTGTAAAAGAAGATGCCGGCTCACCATCTCAAGGGTCTCCAGAAACGATGCAGCTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034378.5 ENSMUST00000211824.2 ENSMUST00000212377.2 ENSMUST00000212802.2 |
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| CDS TCA 72 bp | GACAGAGAAGAGCCCACCAATGGCCCACACTATAAGTaGCAACCCATAGGAAGCAGTGTACTTGAGGACACC | + |
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Preference number: 6 (lower is better) Translates to: DREEPTNGPHYK*QPIGSSVLEDT Trigger: GGTGTCCTCAAGTACACTGCTTCCTATGGGTTGTCACTTATAGTGTGGGCCATTGGTGGGCTCTTCTCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034378.5 ENSMUST00000211824.2 ENSMUST00000212802.2 |
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| CDS TCA 72 bp | ATCTCCTTCTTCAGCTGCATCGTTTCTGGAGACCCTTaGGATGGTGAGCCGGCATCTTCTTTTACAGTGTGC | + |
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Preference number: 6 (lower is better) Translates to: ISFFSCIVSGDP*DGEPASSFTVC Trigger: GCACACTGTAAAAGAAGATGCCGGCTCACCATCTCAAGGGTCTCCAGAAACGATGCAGCTGAAGAAGGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034378.5 ENSMUST00000211824.2 ENSMUST00000212377.2 ENSMUST00000212802.2 |
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