Pregenerated sensors for SLC7A3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031297Ensembl transcript IDs: ENSMUST00000073927.5, ENSMUST00000101362.8, ENSMUST00000113710.8
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATaGGAGGCCCAGCTCTTCGTGGGGTCAAGAGTACTCTCCATTATT | + |
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Preference number: 1 (lower is better) Translates to: TRNTEHYFISVTNTT*EAQLFVGSRVLSII Trigger: AATAATGGAGAGTACTCTTGACCCCACGAAGAGCTGGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| 3UTR CCA 72 bp | CCGTCACTAACACCACATGAGAGGCCCAGCTCTTCGTaGGGTCAAGAGTACTCTCCATTATTGTATAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: PSLTPHERPSSS*GQEYSPLLYRR Trigger: TCTCCTATACAATAATGGAGAGTACTCTTGACCCCACGAAGAGCTGGGCCTCTCATGTGGTGTTAGTGACGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| 3UTR-3UTR CAA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCGAGTACTCTCCATTATaGTATAGGAGAACAAGACAA | + |
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Preference number: 3 (lower is better) Translates to: QEIQSIISYPSLTPHERPEYSPL*YRRTRQ Trigger: TTGTCTTGTTCTCCTATACAATAATGGAGAGTACTC...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR TCA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCGAGCGCTGGGGATTCTaGGCCTCTTCTCCGGTGGTT | + |
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Preference number: 4 (lower is better) Translates to: QEIQSIISYPSLTPHERPERWGF*ASSPVV Trigger: AACCACCGGAGAAGAGGCTCAGAATCCCCAGCGCTC...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR CCA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCGGGAGTGCGGTTCTGTaGCTGTCTCCAGATGACCCC | + |
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Preference number: 4 (lower is better) Translates to: QEIQSIISYPSLTPHERPGSAVL*LSPDDP Trigger: GGGGTCATCTGGAGACAGCCACAGAACCGCACTCCC...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR TCA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCTCAGCACAACCACTGTaGCCCACACTGGGTCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: QEIQSIISYPSLTPHERPSAQPL*PTLGLQ Trigger: CTGGAGACCCAGTGTGGGTCACAGTGGTTGTGCTGA...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR GCA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCCCACTAAGTCGAGGGTaGTCAGGCATCTGGCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QEIQSIISYPSLTPHERPPLSRG*SGIWQG Trigger: GCCTTGCCAGATGCCTGAGCACCCTCGACTTAGTGG...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR GCA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCCACCTGCACCTAATGTaGTGCCCACACCCAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QEIQSIISYPSLTPHERPHLHLM*CPHPEP Trigger: TGGCTCTGGGTGTGGGCAGCACATTAGGTGCAGGTG...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR TCA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCAAGCAGAGTCCCGATTaGCATGAGGTCCACGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: QEIQSIISYPSLTPHERPKQSPD*HEVHEV Trigger: GACCTCGTGGACCTCATGTCAATCGGGACTCTGCTT...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR TCA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCATGGACACCAGGGAGTaGGCAAGCAGAGTCCCGATT | + |
|
Preference number: 4 (lower is better) Translates to: QEIQSIISYPSLTPHERPMDTRE*ASRVPI Trigger: AATCGGGACTCTGCTTGCTCACTCCCTGGTGTCCAT...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR CCA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCCAATACCCATGGGGATaGAGCGCTGGGGATTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QEIQSIISYPSLTPHERPQYPWG*SAGDSE Trigger: CTCAGAATCCCCAGCGCTCCATCCCCATGGGTATTG...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR CCA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCCACTGTGACCCACACTaGGTCTCCAGAACGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QEIQSIISYPSLTPHERPHCDPH*VSRTKW Trigger: CCACTTCGTTCTGGAGACCCAGTGTGGGTCACAGTG...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR TCA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCGGTCCACGAGGTCAGTaGGTTCAAAGAGGAATGCCA | + |
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Preference number: 4 (lower is better) Translates to: QEIQSIISYPSLTPHERPGPRGQ*VQRGMP Trigger: TGGCATTCCTCTTTGAACTCACTGACCTCGTGGACC...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR CCA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCGTCCTGCTTTATCTTTaGCCACCTCTCCAGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QEIQSIISYPSLTPHERPVLLYL*PPLQPG Trigger: TCCTGGCTGGAGAGGTGGCCAAAGATAAAGCAGGAC...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR TCA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCGCCATCTTCTGCCATTaGATACATCACCCGAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QEIQSIISYPSLTPHERPAIFCH*IHHPRH Trigger: ATGCCTCGGGTGATGTATTCAATGGCAGAAGATGGC...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR TCA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCGTGTGGGGATGGAGTTaGCAGGACAAAATAGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: QEIQSIISYPSLTPHERPVWGWS*QDKIEP Trigger: AGGCTCTATTTTGTCCTGTCAACTCCATCCCCACAC...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR GCA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCGCCAACATAGGAAAATaGTTCAGGCAGAGGGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: QEIQSIISYPSLTPHERPANIGK*FRQRAL Trigger: GAGAGCCCTCTGCCTGAAGCATTTTCCTATGTTGGC...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR GCA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCCAAATCGGGCCCAAGTaGCAGCTGTCATTTGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: QEIQSIISYPSLTPHERPQIGPK*QLSFAS Trigger: TGATGCAAATGACAGCTGGCACTTGGGCCCGATTTG...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR TCA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCCATGAGGGTAAGTGCTaGAGACACACCAAAGTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QEIQSIISYPSLTPHERPHEGKC*RHTKVS Trigger: GCTTACTTTGGTGTGTCTTCAGCACTTACCCTCATG...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR GCA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCCACAATGGATGGTCCTaGTTTATCTTTGGCCACCTC | + |
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Preference number: 4 (lower is better) Translates to: QEIQSIISYPSLTPHERPHNGWS*FIFGHL Trigger: GAGGTGGCCAAAGATAAAGCAGGACCATCCATTGTG...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR GCA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCATAACTGTAGAGATATaGAGAACCAGAGCCGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: QEIQSIISYPSLTPHERPITVEI*RTRAGD Trigger: GTCCCCGGCTCTGGTTCTGCATATCTCTACAGTTAT...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR GCA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCGACAGTCAGCTTCTCTaGTTCAAGTGTCTCCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: QEIQSIISYPSLTPHERPDSQLL*FKCLLL Trigger: CAAGAGGAGACACTTGAAGCAGAGAAGCTGACTGTC...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR GCA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCGATGACCCCAGAAATTaGAAGAATGAGCCCCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: QEIQSIISYPSLTPHERPDDPRN*KNEPQD Trigger: ATCCTGGGGCTCATTCTTGCAATTTCTGGGGTCATC...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR CCA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCCACCAGATACCAAGGTaGCCACAATGGGTATATGTG | + |
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Preference number: 4 (lower is better) Translates to: QEIQSIISYPSLTPHERPHQIPR*PQWVYV Trigger: CACATATACCCATTGTGGCCACCTTGGTATCTGGTG...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR CCA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCGGACAAAATAGAGCCTaGACAGTCAGCTTCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: QEIQSIISYPSLTPHERPGQNRA*TVSFSA Trigger: AGCAGAGAAGCTGACTGTCCAGGCTCTATTTTGTCC...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR CCA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCGCAGATCACAATGGATaGTCCTGCTTTATCTTTGGC | + |
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Preference number: 4 (lower is better) Translates to: QEIQSIISYPSLTPHERPADHNG*SCFIFG Trigger: GCCAAAGATAAAGCAGGACCATCCATTGTGATCTGC...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR CCA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCAGAGTCCGAGAGATGTaGTTTCCAATCAGGTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: QEIQSIISYPSLTPHERPRVREM*FPIRLS Trigger: TGACAACCTGATTGGAAACCACATCTCTCGGACTCT...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR TCA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCAGAGTTCACCTACGGTaGCATAACTGTAGAGATATG | + |
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Preference number: 4 (lower is better) Translates to: QEIQSIISYPSLTPHERPRVHLR*HNCRDM Trigger: CATATCTCTACAGTTATGTCACCGTAGGTGAACTCT...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR TCA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCAATAGTCCTCTTTCGTaGGCTTCCAGTTTCTCAGTT | + |
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Preference number: 4 (lower is better) Translates to: QEIQSIISYPSLTPHERPNSPLS*ASSFSV Trigger: AACTGAGAAACTGGAAGCTCACGAAAGAGGACTATT...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR CCA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCTCAAGGTCTATAGTTTaGGCCCTTGTTTTGGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: QEIQSIISYPSLTPHERPSRSIV*ALVLGR Trigger: TCTACCCAAAACAAGGGCCCAAACTATAGACCTTGA...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR TCA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCAAGCCAAAAAGCAGATaGACATCGAGATCACAATAC | + |
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Preference number: 4 (lower is better) Translates to: QEIQSIISYPSLTPHERPKPKSR*TSRSQY Trigger: GTATTGTGATCTCGATGTTCATCTGCTTTTTGGCTT...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR GCA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCGAGTTCAAAGAGGAATaGCATGAATGCTGCAATAAC | + |
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Preference number: 4 (lower is better) Translates to: QEIQSIISYPSLTPHERPEFKEE*HECCNN Trigger: GTTATTGCAGCATTCATGGCATTCCTCTTTGAACTC...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR CCA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCTTTGGGCCCTTGTTTTaGGTAGAGTTTGATGATTCT | + |
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Preference number: 4 (lower is better) Translates to: QEIQSIISYPSLTPHERPFGPLF*VEFDDS Trigger: AGAATCATCAAACTCTACCCAAAACAAGGGCCCAAA...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR GCA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCGAAATCTGGATATTCTaGAAGAACATGAGGCATCTT | + |
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Preference number: 4 (lower is better) Translates to: QEIQSIISYPSLTPHERPEIWIF*KNMRHL Trigger: AAGATGCCTCATGTTCTTGCAGAATATCCAGATTTC...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS CCA 90 bp | TGCTGCCCACACCCAGAGCCACTAAGTCGAGGGTGCTCAGGCATCTaGCAAGGCGGGTCTCACCCATACCCAGCTCCAACACACGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: CCPHPEPLSRGCSGI*QGGSHPYPAPTHVS Trigger: GGAGACGTGTGTTGGAGCTGGGTATGGGTGAGACCCGCCTTGCCAGATGCCTGAGCACCCTCGACTTAGTGGCTCTGGGTGTGGGCAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS CCA 90 bp | TGCAAGAATGAGCCCCAGGATCAGCACAACCACTGTGACCCACACTaGGTCTCCAGAACGAAGTGGAGTTGTCCACCAGGTCAGCACCAG | + |
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Preference number: 5 (lower is better) Translates to: CKNEPQDQHNHCDPH*VSRTKWSCPPGQHQ Trigger: CTGGTGCTGACCTGGTGGACAACTCCACTTCGTTCTGGAGACCCAGTGTGGGTCACAGTGGTTGTGCTGATCCTGGGGCTCATTCTTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS GCA 90 bp | AATAGCCACCAAGTAGCGGGCAGGCTCCCAGCCAACATAGGAAAATaGTTCAGGCAGAGGGCTCTCAGGATGAAGCTTGTAGTAAGGCAT | + |
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Preference number: 5 (lower is better) Translates to: NSHQVAGRLPANIGK*FRQRALRMKLVVRH Trigger: ATGCCTTACTACAAGCTTCATCCTGAGAGCCCTCTGCCTGAAGCATTTTCCTATGTTGGCTGGGAGCCTGCCCGCTACTTGGTGGCTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS CCA 90 bp | CCAGAAAGGAGTGTGGGGATGGAGTTGACAGGACAAAATAGAGCCTaGACAGTCAGCTTCTCTGCTTCAAGTGTCTCCTCTTGCAATTCC | + |
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Preference number: 5 (lower is better) Translates to: PERSVGMELTGQNRA*TVSFSASSVSSCNS Trigger: GGAATTGCAAGAGGAGACACTTGAAGCAGAGAAGCTGACTGTCCAGGCTCTATTTTGTCCTGTCAACTCCATCCCCACACTCCTTTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS TCA 90 bp | AGCAAACATAGACAACTCGGCCAGAAAGGAGTGTGGGGATGGAGTTaGCAGGACAAAATAGAGCCTGGACAGTCAGCTTCTCTGCTTCAA | + |
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Preference number: 5 (lower is better) Translates to: SKHRQLGQKGVWGWS*QDKIEPGQSASLLQ Trigger: TTGAAGCAGAGAAGCTGACTGTCCAGGCTCTATTTTGTCCTGTCAACTCCATCCCCACACTCCTTTCTGGCCGAGTTGTCTATGTTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR CAA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCGGTCCTGCTTTATCTTaGGCCACCTCTCCAGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: QEIQSIISYPSLTPHERPGPALS*ATSPAR Trigger: CCTGGCTGGAGAGGTGGCCAAAGATAAAGCAGGACC...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR CAA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCGGCCATCTTCTGCCATaGAATACATCACCCGAGGCA | + |
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Preference number: 5 (lower is better) Translates to: QEIQSIISYPSLTPHERPGHLLP*NTSPEA Trigger: TGCCTCGGGTGATGTATTCAATGGCAGAAGATGGCC...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR CAA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCTCTCCGCACCAGCTTTaGACCAAATCTTCGAAGTGC | + |
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Preference number: 5 (lower is better) Translates to: QEIQSIISYPSLTPHERPSPHQL*TKSSKC Trigger: GCACTTCGAAGATTTGGTCAAAAGCTGGTGCGGAGA...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR CAA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCCCAGGGCTGATTTACTaGCCCCTAAAACCAGCAATC | + |
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Preference number: 5 (lower is better) Translates to: QEIQSIISYPSLTPHERPPGLIY*PLKPAI Trigger: GATTGCTGGTTTTAGGGGCAAGTAAATCAGCCCTGG...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR CAA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCAGTGTGGGGATGGAGTaGACAGGACAAAATAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: QEIQSIISYPSLTPHERPSVGME*TGQNRA Trigger: GGCTCTATTTTGTCCTGTCAACTCCATCCCCACACT...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR CAA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCCCTCTTCTCCGGTGGTaGCAATACAGTCAAAACCAA | + |
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Preference number: 5 (lower is better) Translates to: QEIQSIISYPSLTPHERPPLLRW*QYSQNQ Trigger: TTGGTTTTGACTGTATTGCAACCACCGGAGAAGAGG...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR CAA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCTGGTTTCCAATCAGGTaGTCAAAAGCAGAGCTCCAA | + |
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Preference number: 5 (lower is better) Translates to: QEIQSIISYPSLTPHERPWFPIR*SKAELQ Trigger: TTGGAGCTCTGCTTTTGACAACCTGATTGGAAACCA...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR CAA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCATCCCTGTGAACACTTaGGTAACCAGGGCTGATTTA | + |
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Preference number: 5 (lower is better) Translates to: QEIQSIISYPSLTPHERPIPVNT*VTRADL Trigger: TAAATCAGCCCTGGTTACCAAAGTGTTCACAGGGAT...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS-3UTR CAA 90 bp | CAAGAAATACAGAGCATTATTTCATATCCGTCACTAACACCACATGAGAGGCCCTTCTTTCATACTGTGTaGGATCCCATAGCCAAAGTA | + |
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Preference number: 5 (lower is better) Translates to: QEIQSIISYPSLTPHERPFFHTV*DPIAKV Trigger: TACTTTGGCTATGGGATCCAACACAGTATGAAAGAA...GGGCCTCTCATGTGGTGTTAGTGACGGATATGAAATAATGCTCTGTATTTCTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS GCA 72 bp | ATGTGCTGCCCACACCCAGAGCCACTAAGTCGAGGGTaGTCAGGCATCTGGCAAGGCGGGTCTCACCCATAC | + |
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Preference number: 6 (lower is better) Translates to: MCCPHPEPLSRG*SGIWQGGSHPY Trigger: GTATGGGTGAGACCCGCCTTGCCAGATGCCTGAGCACCCTCGACTTAGTGGCTCTGGGTGTGGGCAGCACAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS CCA 72 bp | CACCCAGAGCCACTAAGTCGAGGGTGCTCAGGCATCTaGCAAGGCGGGTCTCACCCATACCCAGCTCCAACA | + |
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Preference number: 6 (lower is better) Translates to: HPEPLSRGCSGI*QGGSHPYPAPT Trigger: TGTTGGAGCTGGGTATGGGTGAGACCCGCCTTGCCAGATGCCTGAGCACCCTCGACTTAGTGGCTCTGGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS CCA 72 bp | GAGCCCCAGGATCAGCACAACCACTGTGACCCACACTaGGTCTCCAGAACGAAGTGGAGTTGTCCACCAGGT | + |
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Preference number: 6 (lower is better) Translates to: EPQDQHNHCDPH*VSRTKWSCPPG Trigger: ACCTGGTGGACAACTCCACTTCGTTCTGGAGACCCAGTGTGGGTCACAGTGGTTGTGCTGATCCTGGGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS GCA 72 bp | GCGGTTCTGTGGCTGTCTCCAGATGACCCCAGAAATTaGAAGAATGAGCCCCAGGATCAGCACAACCACTGT | + |
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Preference number: 6 (lower is better) Translates to: AVLWLSPDDPRN*KNEPQDQHNHC Trigger: ACAGTGGTTGTGCTGATCCTGGGGCTCATTCTTGCAATTTCTGGGGTCATCTGGAGACAGCCACAGAACCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS CCA 72 bp | GGACAGAGCAGCCACCAAAAAGCAGATCACAATGGATaGTCCTGCTTTATCTTTGGCCACCTCTCCAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: GQSSHQKADHNG*SCFIFGHLSSQ Trigger: CTGGCTGGAGAGGTGGCCAAAGATAAAGCAGGACCATCCATTGTGATCTGCTTTTTGGTGGCTGCTCTGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS TCA 72 bp | ATCACAATACCCATGGGGATGGAGCGCTGGGGATTCTaGGCCTCTTCTCCGGTGGTTGCAATACAGTCAAAA | + |
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Preference number: 6 (lower is better) Translates to: ITIPMGMERWGF*ASSPVVAIQSK Trigger: TTTTGACTGTATTGCAACCACCGGAGAAGAGGCTCAGAATCCCCAGCGCTCCATCCCCATGGGTATTGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS GCA 72 bp | CATAGGAAACATAGAGCCCAAAAGGCTAGTAGAAAGTaGACAGAGGGAGCCAATAGCCACCAAGTAGCGGGC | + |
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Preference number: 6 (lower is better) Translates to: HRKHRAQKASRK*TEGANSHQVAG Trigger: GCCCGCTACTTGGTGGCTATTGGCTCCCTCTGTGCACTTTCTACTAGCCTTTTGGGCTCTATGTTTCCTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS CCA 72 bp | CAGAGGACAGAGCAGCCACCAAAAAGCAGATCACAATaGATGGTCCTGCTTTATCTTTGGCCACCTCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: QRTEQPPKSRSQ*MVLLYLWPPLQ Trigger: CTGGAGAGGTGGCCAAAGATAAAGCAGGACCATCCATTGTGATCTGCTTTTTGGTGGCTGCTCTGTCCTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS TCA 72 bp | GGGCTGATTTACTTGCCCCTAAAACCAGCAATCCAGTaGGCAGCAACACAAGGGCCAAGGCAAAGAAATCTG | + |
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Preference number: 6 (lower is better) Translates to: GLIYLPLKPAIQ*AATQGPRQRNL Trigger: CAGATTTCTTTGCCTTGGCCCTTGTGTTGCTGCTCACTGGATTGCTGGTTTTAGGGGCAAGTAAATCAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS CCA 72 bp | AGTGTGGGGATGGAGTTGACAGGACAAAATAGAGCCTaGACAGTCAGCTTCTCTGCTTCAAGTGTCTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: SVGMELTGQNRA*TVSFSASSVSS Trigger: AGAGGAGACACTTGAAGCAGAGAAGCTGACTGTCCAGGCTCTATTTTGTCCTGTCAACTCCATCCCCACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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| CDS GCA 72 bp | CACGAGGTCAGTGAGTTCAAAGAGGAATGCCATGAATaGTGCAATAACACCAGATACCAAGGTGGCCACAAT | + |
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Preference number: 6 (lower is better) Translates to: HEVSEFKEECHE*CNNTRYQGGHN Trigger: ATTGTGGCCACCTTGGTATCTGGTGTTATTGCAGCATTCATGGCATTCCTCTTTGAACTCACTGACCTCGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073927.5 ENSMUST00000101362.8 ENSMUST00000113710.8 |
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