Pregenerated sensors for SLC7A13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041052Ensembl transcript IDs: ENSMUST00000035890.8
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GCCTGTGAATTGAACTTCAGTCCCCTGGAAGGACATCTGGTGCCCTTAACAGCAATCTGGAACACAGTATaGCTACAAAGGCTATTCTTC | + |
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Preference number: 2 (lower is better) Translates to: ACELNFSPLEGHLVPLTAIWNTV*LQRLFF Trigger: GAAGAATAGCCTTTGTAGCCATACTGTGTTCCAGAT...TGCTGTTAAGGGCACCAGATGTCCTTCCAGGGGACTGAAGTTCAATTCACAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCAGATGCATGCAGTGCTGGTAGAATCCAGTAGAGGATATTGGATCCTCTGTCACTTAACCTTTATCTaGAACACAGTATGGCTACAA | + |
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Preference number: 2 (lower is better) Translates to: LQMHAVLVESSRGYWILCHLTFI*NTVWLQ Trigger: TTGTAGCCATACTGTGTTCCAGATAAAGGTTAAGTG...ACAGAGGATCCAATATCCTCTACTGGATTCTACCAGCACTGCATGCATCTGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| 3UTR-3UTR CAA 90 bp | CTCCAGATGCATGCAGTGCTGGTAGAATCCAGTAGAGGATATTGGATCCTCTGTAGTGGGGCCTGTGAATaGAACTTCAGTCCCCTGGAA | + |
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Preference number: 3 (lower is better) Translates to: LQMHAVLVESSRGYWILCSGACE*NFSPLE Trigger: TTCCAGGGGACTGAAGTTCAATTCACAGGCCCCACT...ACAGAGGATCCAATATCCTCTACTGGATTCTACCAGCACTGCATGCATCTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS-3UTR CCA 90 bp | CTCCAGATGCATGCAGTGCTGGTAGAATCCAGTAGAGGATATTGGATCCTCTGTTCGGGGCAGAGCAGCTaGGATAAAAAGGCTGAACGC | + |
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Preference number: 4 (lower is better) Translates to: LQMHAVLVESSRGYWILCSGQSS*DKKAER Trigger: GCGTTCAGCCTTTTTATCCCAGCTGCTCTGCCCCGA...ACAGAGGATCCAATATCCTCTACTGGATTCTACCAGCACTGCATGCATCTGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS-3UTR CCA 90 bp | GCCTGTGAATTGAACTTCAGTCCCCTGGAAGGACATCTGGTGCCCTTAACAGCAGAAGAGAGCATTTCCTaGGGTGTCAGAACTGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: ACELNFSPLEGHLVPLTAEESIS*GVRTVR Trigger: CCTGACAGTTCTGACACCCCAGGAAATGCTCTCTTC...TGCTGTTAAGGGCACCAGATGTCCTTCCAGGGGACTGAAGTTCAATTCACAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS-3UTR CCA 90 bp | TGTAAATGTGCATGGGTGCCTACATGTATGTCTCTACTCCAGATGCATGCAGTGCAGAGCAGAGAGCACTaGTCAAGGTCAGCACTGCAC | + |
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Preference number: 4 (lower is better) Translates to: CKCAWVPTCMSLLQMHAVQSREH*SRSALH Trigger: GTGCAGTGCTGACCTTGACCAGTGCTCTCTGCTCTG...CACTGCATGCATCTGGAGTAGAGACATACATGTAGGCACCCATGCACATTTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS-3UTR CCA 90 bp | CTCCAGATGCATGCAGTGCTGGTAGAATCCAGTAGAGGATATTGGATCCTCTGTGCCAGTAGCAGAGCTTaGCTAGCAATTAAGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: LQMHAVLVESSRGYWILCASSRA*LAIKPG Trigger: CCCAGGCTTAATTGCTAGCCAAGCTCTGCTACTGGC...ACAGAGGATCCAATATCCTCTACTGGATTCTACCAGCACTGCATGCATCTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS-3UTR TCA 90 bp | CTCCAGATGCATGCAGTGCTGGTAGAATCCAGTAGAGGATATTGGATCCTCTGTCACTGTCTGAAGCCATaGCAGCTCTTTTACACCACG | + |
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Preference number: 4 (lower is better) Translates to: LQMHAVLVESSRGYWILCHCLKP*QLFYTT Trigger: CGTGGTGTAAAAGAGCTGTCATGGCTTCAGACAGTG...ACAGAGGATCCAATATCCTCTACTGGATTCTACCAGCACTGCATGCATCTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS-3UTR GCA 90 bp | TGTAAATGTGCATGGGTGCCTACATGTATGTCTCTACTCCAGATGCATGCAGTGGGTTATCCCGATCTCTaGAGAGCAGAGAGCACTGGT | + |
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Preference number: 4 (lower is better) Translates to: CKCAWVPTCMSLLQMHAVGYPDL*RAESTG Trigger: ACCAGTGCTCTCTGCTCTGCAGAGATCGGGATAACC...CACTGCATGCATCTGGAGTAGAGACATACATGTAGGCACCCATGCACATTTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| 3UTR CAA 72 bp | ACAGATAGTTATGAACTTCTAAGTGGGGCCTGTGAATaGAACTTCAGTCCCCTGGAAGGACATCTGGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: TDSYELLSGACE*NFSPLEGHLVP Trigger: GGGCACCAGATGTCCTTCCAGGGGACTGAAGTTCAATTCACAGGCCCCACTTAGAAGTTCATAACTATCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS-3UTR CCA 90 bp | GCCTGTGAATTGAACTTCAGTCCCCTGGAAGGACATCTGGTGCCCTTAACAGCACTTTCTTCATGTATGTaGTCATCAGACACATCAGGG | + |
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Preference number: 4 (lower is better) Translates to: ACELNFSPLEGHLVPLTALSSCM*SSDTSG Trigger: CCCTGATGTGTCTGATGACCACATACATGAAGAAAG...TGCTGTTAAGGGCACCAGATGTCCTTCCAGGGGACTGAAGTTCAATTCACAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS-3UTR TCA 90 bp | TGTAAATGTGCATGGGTGCCTACATGTATGTCTCTACTCCAGATGCATGCAGTGAAAACACCAGCCCACTaGGAAGGAAGAGGAACACAT | + |
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Preference number: 4 (lower is better) Translates to: CKCAWVPTCMSLLQMHAVKTPAH*EGRGTH Trigger: ATGTGTTCCTCTTCCTTCTCAGTGGGCTGGTGTTTT...CACTGCATGCATCTGGAGTAGAGACATACATGTAGGCACCCATGCACATTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS-3UTR CCA 90 bp | GCCTGTGAATTGAACTTCAGTCCCCTGGAAGGACATCTGGTGCCCTTAACAGCATTTAAAGTGTATCAATaGCACGTAAAACACCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: ACELNFSPLEGHLVPLTAFKVYQ*HVKHQP Trigger: GGGCTGGTGTTTTACGTGCCATTGATACACTTTAAA...TGCTGTTAAGGGCACCAGATGTCCTTCCAGGGGACTGAAGTTCAATTCACAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS-3UTR TCA 90 bp | TTCTTTCTTTCTCTCTTTCTTTCTTCTTGTAAATGTGCATGGGTGCCTACATGTGCCCACCTTCAGCACTaGGCTCACTGTCTGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: FFLSLFLSSCKCAWVPTCAHLQH*AHCLKP Trigger: TGGCTTCAGACAGTGAGCTCAGTGCTGAAGGTGGGC...ACATGTAGGCACCCATGCACATTTACAAGAAGAAAGAAAGAGAGAAAGAAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS-3UTR CCA 90 bp | CTCCAGATGCATGCAGTGCTGGTAGAATCCAGTAGAGGATATTGGATCCTCTGTATAAAGGGAGAGGAATaGACATTCAGGGCACAAAAC | + |
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Preference number: 4 (lower is better) Translates to: LQMHAVLVESSRGYWILCIKGEE*TFRAQN Trigger: GTTTTGTGCCCTGAATGTCCATTCCTCTCCCTTTAT...ACAGAGGATCCAATATCCTCTACTGGATTCTACCAGCACTGCATGCATCTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS-3UTR GCA 90 bp | TTCTTTCTTTCTCTCTTTCTTTCTTCTTGTAAATGTGCATGGGTGCCTACATGTGGTCAAGGTCAGCACTaGACAGACAGCCCAAACACA | + |
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Preference number: 4 (lower is better) Translates to: FFLSLFLSSCKCAWVPTCGQGQH*TDSPNT Trigger: TGTGTTTGGGCTGTCTGTGCAGTGCTGACCTTGACC...ACATGTAGGCACCCATGCACATTTACAAGAAGAAAGAAAGAGAGAAAGAAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS-3UTR TCA 90 bp | TTCTTTCTTTCTCTCTTTCTTTCTTCTTGTAAATGTGCATGGGTGCCTACATGTATAGCTTCTATTAACTaGGAGACCTCTGGGAACTCG | + |
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Preference number: 4 (lower is better) Translates to: FFLSLFLSSCKCAWVPTCIASIN*ETSGNS Trigger: CGAGTTCCCAGAGGTCTCTCAGTTAATAGAAGCTAT...ACATGTAGGCACCCATGCACATTTACAAGAAGAAAGAAAGAGAGAAAGAAAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS-3UTR CCA 90 bp | TTCTTTCTTTCTCTCTTTCTTTCTTCTTGTAAATGTGCATGGGTGCCTACATGTATGGTCTGTGTAGATTaGGCTCTTGGTACCTCAGTT | + |
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Preference number: 4 (lower is better) Translates to: FFLSLFLSSCKCAWVPTCMVCVD*ALGTSV Trigger: AACTGAGGTACCAAGAGCCCAATCTACACAGACCAT...ACATGTAGGCACCCATGCACATTTACAAGAAGAAAGAAAGAGAGAAAGAAAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS-3UTR CCA 90 bp | TTCTTTCTTTCTCTCTTTCTTTCTTCTTGTAAATGTGCATGGGTGCCTACATGTAACAACAAAGGCAGCTaGCCATTCTCACTTGCAATA | + |
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Preference number: 4 (lower is better) Translates to: FFLSLFLSSCKCAWVPTCNNKGS*PFSLAI Trigger: TATTGCAAGTGAGAATGGCCAGCTGCCTTTGTTGTT...ACATGTAGGCACCCATGCACATTTACAAGAAGAAAGAAAGAGAGAAAGAAAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS CCA 90 bp | CACTGTATGGGAAGGTTATCCCGATCTCTGCAGAGCAGAGAGCACTaGTCAAGGTCAGCACTGCACAGACAGCCCAAACACACAAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: HCMGRLSRSLQSREH*SRSALHRQPKHTRR Trigger: TCTCCTTGTGTGTTTGGGCTGTCTGTGCAGTGCTGACCTTGACCAGTGCTCTCTGCTCTGCAGAGATCGGGATAACCTTCCCATACAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS GCA 90 bp | TATCCCGATCTCTGCAGAGCAGAGAGCACTGGTCAAGGTCAGCACTaGACAGACAGCCCAAACACACAAGGAGACTCCAACATTCATGGA | + |
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Preference number: 5 (lower is better) Translates to: YPDLCRAESTGQGQH*TDSPNTQGDSNIHG Trigger: TCCATGAATGTTGGAGTCTCCTTGTGTGTTTGGGCTGTCTGTGCAGTGCTGACCTTGACCAGTGCTCTCTGCTCTGCAGAGATCGGGATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS CCA 90 bp | GCACTGCACAGACAGCCCAAACACACAAGGAGACTCCAACATTCATaGAAGAGTGCTGGAGCACTCCCTTGGGGGACACAAATATTCCTG | + |
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Preference number: 5 (lower is better) Translates to: ALHRQPKHTRRLQHS*KSAGALPWGTQIFL Trigger: CAGGAATATTTGTGTCCCCCAAGGGAGTGCTCCAGCACTCTTCCATGAATGTTGGAGTCTCCTTGTGTGTTTGGGCTGTCTGTGCAGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS TCA 90 bp | GAAATGACACCGAGTATGCCCACCTTCAGCACTGAGCTCACTGTCTaGAGCCATGACAGCTCTTTTACACCACGAGAATTCAGAATTCCC | + |
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Preference number: 5 (lower is better) Translates to: EMTPSMPTFSTELTV*SHDSSFTPREFRIP Trigger: GGGAATTCTGAATTCTCGTGGTGTAAAAGAGCTGTCATGGCTTCAGACAGTGAGCTCAGTGCTGAAGGTGGGCATACTCGGTGTCATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS CCA 90 bp | ACAGCCCAAACACACAAGGAGACTCCAACATTCATGGAAGAGTGCTaGAGCACTCCCTTGGGGGACACAAATATTCCTGCACCAATTATA | + |
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Preference number: 5 (lower is better) Translates to: TAQTHKETPTFMEEC*STPLGDTNIPAPII Trigger: TATAATTGGTGCAGGAATATTTGTGTCCCCCAAGGGAGTGCTCCAGCACTCTTCCATGAATGTTGGAGTCTCCTTGTGTGTTTGGGCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS CCA 90 bp | CAGCCCACTGAGAAGGAAGAGGAACACATAGATATAATGCAACTTTaGAGACTTGACAAGCGGGATCAAAACCAAGCTCAGGGTGATGCC | + |
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Preference number: 5 (lower is better) Translates to: QPTEKEEEHIDIMQL*RLDKRDQNQAQGDA Trigger: GGCATCACCCTGAGCTTGGTTTTGATCCCGCTTGTCAAGTCTCCAAAGTTGCATTATATCTATGTGTTCCTCTTCCTTCTCAGTGGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS-3UTR CAA 90 bp | GCCTGTGAATTGAACTTCAGTCCCCTGGAAGGACATCTGGTGCCCTTAACAGCAGCTGGCCATTCTCACTaGCAATATATAACACTCTTG | + |
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Preference number: 5 (lower is better) Translates to: ACELNFSPLEGHLVPLTAAGHSH*QYITLL Trigger: CAAGAGTGTTATATATTGCAAGTGAGAATGGCCAGC...TGCTGTTAAGGGCACCAGATGTCCTTCCAGGGGACTGAAGTTCAATTCACAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS-3UTR CAA 90 bp | CTCCAGATGCATGCAGTGCTGGTAGAATCCAGTAGAGGATATTGGATCCTCTGTTATGGTCTGTGTAGATaGGGCTCTTGGTACCTCAGT | + |
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Preference number: 5 (lower is better) Translates to: LQMHAVLVESSRGYWILCYGLCR*GSWYLS Trigger: ACTGAGGTACCAAGAGCCCAATCTACACAGACCATA...ACAGAGGATCCAATATCCTCTACTGGATTCTACCAGCACTGCATGCATCTGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS CCA 90 bp | GATGCCATACTGATAATTAGTAGCACAGCTATAAAGGGAGAGGAATaGACATTCAGGGCACAAAACAACAAAGGCAGCTGGCCATTCTCA | + |
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Preference number: 5 (lower is better) Translates to: DAILIISSTAIKGEE*TFRAQNNKGSWPFS Trigger: TGAGAATGGCCAGCTGCCTTTGTTGTTTTGTGCCCTGAATGTCCATTCCTCTCCCTTTATAGCTGTGCTACTAATTATCAGTATGGCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS CCA 90 bp | AAGGGAGAGGAATGGACATTCAGGGCACAAAACAACAAAGGCAGCTaGCCATTCTCACTTGCAATATATAACACTCTTGATGTCTCAAGT | + |
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Preference number: 5 (lower is better) Translates to: KGEEWTFRAQNNKGS*PFSLAIYNTLDVSS Trigger: ACTTGAGACATCAAGAGTGTTATATATTGCAAGTGAGAATGGCCAGCTGCCTTTGTTGTTTTGTGCCCTGAATGTCCATTCCTCTCCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS CCA 90 bp | AGTCAACTTCTGAAACCAAACGAACTTCACTTTAAAGTGTATCAATaGCACGTAAAACACCAGCCCACTGAGAAGGAAGAGGAACACATA | + |
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Preference number: 5 (lower is better) Translates to: SQLLKPNELHFKVYQ*HVKHQPTEKEEEHI Trigger: TATGTGTTCCTCTTCCTTCTCAGTGGGCTGGTGTTTTACGTGCCATTGATACACTTTAAAGTGAAGTTCGTTTGGTTTCAGAAGTTGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS GCA 72 bp | CTCTGCAGAGCAGAGAGCACTGGTCAAGGTCAGCACTaGACAGACAGCCCAAACACACAAGGAGACTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: LCRAESTGQGQH*TDSPNTQGDSN Trigger: GTTGGAGTCTCCTTGTGTGTTTGGGCTGTCTGTGCAGTGCTGACCTTGACCAGTGCTCTCTGCTCTGCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS CCA 72 bp | GGAAGGTTATCCCGATCTCTGCAGAGCAGAGAGCACTaGTCAAGGTCAGCACTGCACAGACAGCCCAAACAC | + |
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Preference number: 6 (lower is better) Translates to: GRLSRSLQSREH*SRSALHRQPKH Trigger: GTGTTTGGGCTGTCTGTGCAGTGCTGACCTTGACCAGTGCTCTCTGCTCTGCAGAGATCGGGATAACCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS CCA 72 bp | AGACAGCCCAAACACACAAGGAGACTCCAACATTCATaGAAGAGTGCTGGAGCACTCCCTTGGGGGACACAA | + |
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Preference number: 6 (lower is better) Translates to: RQPKHTRRLQHS*KSAGALPWGTQ Trigger: TTGTGTCCCCCAAGGGAGTGCTCCAGCACTCTTCCATGAATGTTGGAGTCTCCTTGTGTGTTTGGGCTGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS TCA 72 bp | CCGAGTATGCCCACCTTCAGCACTGAGCTCACTGTCTaGAGCCATGACAGCTCTTTTACACCACGAGAATTC | + |
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Preference number: 6 (lower is better) Translates to: PSMPTFSTELTV*SHDSSFTPREF Trigger: GAATTCTCGTGGTGTAAAAGAGCTGTCATGGCTTCAGACAGTGAGCTCAGTGCTGAAGGTGGGCATACTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS CAA 72 bp | ACTCCAACATTCATGGAAGAGTGCTGGAGCACTCCCTaGGGGGACACAAATATTCCTGCACCAATTATATTA | + |
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Preference number: 6 (lower is better) Translates to: TPTFMEECWSTP*GDTNIPAPIIL Trigger: TAATATAATTGGTGCAGGAATATTTGTGTCCCCCAAGGGAGTGCTCCAGCACTCTTCCATGAATGTTGGAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS TCA 72 bp | AACGCAAAGTATCCTTGGAAAATAGCTTCTATTAACTaGGAGACCTCTGGGAACTCGGCATCAAACGCATTC | + |
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Preference number: 6 (lower is better) Translates to: NAKYPWKIASIN*ETSGNSASNAF Trigger: GAATGCGTTTGATGCCGAGTTCCCAGAGGTCTCTCAGTTAATAGAAGCTATTTTCCAAGGATACTTTGCGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS CCA 72 bp | CTGAAACCAAACGAACTTCACTTTAAAGTGTATCAATaGCACGTAAAACACCAGCCCACTGAGAAGGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: LKPNELHFKVYQ*HVKHQPTEKEE Trigger: CTCTTCCTTCTCAGTGGGCTGGTGTTTTACGTGCCATTGATACACTTTAAAGTGAAGTTCGTTTGGTTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS CCA 72 bp | GAATGGACATTCAGGGCACAAAACAACAAAGGCAGCTaGCCATTCTCACTTGCAATATATAACACTCTTGAT | + |
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Preference number: 6 (lower is better) Translates to: EWTFRAQNNKGS*PFSLAIYNTLD Trigger: ATCAAGAGTGTTATATATTGCAAGTGAGAATGGCCAGCTGCCTTTGTTGTTTTGTGCCCTGAATGTCCATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS CAA 72 bp | GGGCACAAAACAACAAAGGCAGCTGGCCATTCTCACTaGCAATATATAACACTCTTGATGTCTCAAGTACAT | + |
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Preference number: 6 (lower is better) Translates to: GHKTTKAAGHSH*QYITLLMSQVH Trigger: ATGTACTTGAGACATCAAGAGTGTTATATATTGCAAGTGAGAATGGCCAGCTGCCTTTGTTGTTTTGTGCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS CAA 90 bp | GCAATATATAACACTCTTGATGTCTCAAGTACATTAATCACAAGGTaGATAAACAGTGAAGCAGAAATAGCAAAAGGAACAGTCCATGTG | + |
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Preference number: 6 (lower is better) Translates to: AIYNTLDVSSTLITR*INSEAEIAKGTVHV Trigger: CACATGGACTGTTCCTTTTGCTATTTCTGCTTCACTGTTTATCAACCTTGTGATTAATGTACTTGAGACATCAAGAGTGTTATATATTGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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| CDS CCA 72 bp | AAAAACACCTTATATGGTCTGTGTAGATTGGGCTCTTaGTACCTCAGTTTCAAGATTCCTATTATTGATAAG | + |
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Preference number: 6 (lower is better) Translates to: KNTLYGLCRLGS*YLSFKIPIIDK Trigger: CTTATCAATAATAGGAATCTTGAAACTGAGGTACCAAGAGCCCAATCTACACAGACCATATAAGGTGTTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035890.8 |
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