Pregenerated sensors for SLC7A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041313Ensembl transcript IDs: ENSMUST00000048116.15, ENSMUST00000138257.8, ENSMUST00000138596.2, ENSMUST00000202457.4
Found 201 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGGCCTGCTTCCCAAGTGAGAGGAGAAGGGGGCCTCCCTTCTGCTaGGGCCGCAGCAGCGAAGCGCCCGGCCGGCCGGCAAGGAGAAGG | + |
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Preference number: 1 (lower is better) Translates to: EACFPSERRRGPPFC*GRSSEAPGRPARRR Trigger: CCTTCTCCTTGCCGGCCGGCCGGGCGCTTCGCTGCTGCGGCCCCAGCAGAAGGGAGGCCCCCTTCTCCTCTCACTTGGGAAGCAGGCCTC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR GCA 90 bp | TGCACATGGGCGATGCCAGGGTGGTCCCAGGGAGGGAGGGAGGCCTaGTTCCCAAGTGAGAGGAGAAGGGGGCCTCCCTTCTGCTGGGGC | + |
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Preference number: 1 (lower is better) Translates to: CTWAMPGWSQGGREA*FPSERRRGPPFCWG Trigger: GCCCCAGCAGAAGGGAGGCCCCCTTCTCCTCTCACTTGGGAAGCAGGCCTCCCTCCCTCCCTGGGACCACCCTGGCATCGCCCATGTGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR GCA 90 bp | CGGCTCACACCTGAACGGCTCACACCGTGCTGTGTTCTGCACAGATaGTTCTGTGCAGACCCGGGACCCCATCCTACCACCCCAGCCAGA | + |
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Preference number: 1 (lower is better) Translates to: RLTPERLTPCCVLHR*FCADPGPHPTTPAR Trigger: TCTGGCTGGGGTGGTAGGATGGGGTCCCGGGTCTGCACAGAAGCATCTGTGCAGAACACAGCACGGTGTGAGCCGTTCAGGTGTGAGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR GCA 90 bp | TTCTGTGCTCGAGATGAGCGGCTCACACCTGAACGGCTCACACCGTaGTGTGTTCTGCACAGATGCTTCTGTGCAGACCCGGGACCCCAT | + |
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Preference number: 1 (lower is better) Translates to: FCARDERLTPERLTP*CVLHRCFCADPGPH Trigger: ATGGGGTCCCGGGTCTGCACAGAAGCATCTGTGCAGAACACAGCACGGTGTGAGCCGTTCAGGTGTGAGCCGCTCATCTCGAGCACAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR CCA 90 bp | AGGAATGAGACCAGAGAATGTCACCCTAGTCCACGCGGGCTGAGCTaGCCGTCTCATCTCGACACTACTGGTCACTCCAGGGATCTCCCG | + |
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Preference number: 1 (lower is better) Translates to: RNETRECHPSPRGLS*PSHLDTTGHSRDLP Trigger: CGGGAGATCCCTGGAGTGACCAGTAGTGTCGAGATGAGACGGCCAGCTCAGCCCGCGTGGACTAGGGTGACATTCTCTGGTCTCATTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR TCA 90 bp | CTGCTAGGAATGAGACCAGAGAATGTCACCCTAGTCCACGCGGGCTaGGCTGGCCGTCTCATCTCGACACTACTGGTCACTCCAGGGATC | + |
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Preference number: 1 (lower is better) Translates to: LLGMRPENVTLVHAG*AGRLISTLLVTPGI Trigger: GATCCCTGGAGTGACCAGTAGTGTCGAGATGAGACGGCCAGCTCAGCCCGCGTGGACTAGGGTGACATTCTCTGGTCTCATTCCTAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR GCA 90 bp | CTCCCTTCGCTAGCCCAACCATACCTGGACTCAAACATCCCTGTTTaGATCACCCACCAACACCCCAAGGGGTGGGCACCCTGGCACTTA | + |
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Preference number: 1 (lower is better) Translates to: LPSLAQPYLDSNIPV*ITHQHPKGWAPWHL Trigger: TAAGTGCCAGGGTGCCCACCCCTTGGGGTGTTGGTGGGTGATGCAAACAGGGATGTTTGAGTCCAGGTATGGTTGGGCTAGCGAAGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR GCA 90 bp | ATGGGACTCTTCTTTGGGCAGGAGGCTAGGAGACGGGATACCACCTaGTGTTGGTCTGGAGGGATGTGTGTGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: MGLFFGQEARRRDTT*CWSGGMCVCVCVCV Trigger: CACACACACACACACACACACACACATCCCTCCAGACCAACAGCAGGTGGTATCCCGTCTCCTAGCCTCCTGCCCAAAGAAGAGTCCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR CCA 90 bp | TTCCTCGCTGGGATAGTCTTGCATCTTGTGGTCAGGAGACTGTCCTaGGCTGACAGGGAGAGGCTCACTAGCCATCTGGAGTGTGCACAT | + |
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Preference number: 1 (lower is better) Translates to: FLAGIVLHLVVRRLS*ADRERLTSHLECAH Trigger: ATGTGCACACTCCAGATGGCTAGTGAGCCTCTCCCTGTCAGCCCAGGACAGTCTCCTGACCACAAGATGCAAGACTATCCCAGCGAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR CCA 90 bp | GGGCCTAGGTGTGCACCCACCCTTCCACAAATATACACGGGGGTGTaGGGTGGGAGGGTTAATGTCTCTATAGACACCACCTACCACTAC | + |
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Preference number: 1 (lower is better) Translates to: GPRCAPTLPQIYTGV*GGRVNVSIDTTYHY Trigger: GTAGTGGTAGGTGGTGTCTATAGAGACATTAACCCTCCCACCCCACACCCCCGTGTATATTTGTGGAAGGGTGGGTGCACACCTAGGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR CCA 90 bp | GCCAGCCATTCAGCACGTGTAACAGGATGGTCCAGGAAGGCTCCTTaGTCATCACCGTGTCTCAAGACCTTTGGCTACACCATATTCCCC | + |
|
Preference number: 1 (lower is better) Translates to: ASHSARVTGWSRKAP*SSPCLKTFGYTIFP Trigger: GGGGAATATGGTGTAGCCAAAGGTCTTGAGACACGGTGATGACCAAGGAGCCTTCCTGGACCATCCTGTTACACGTGCTGAATGGCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR TCA 90 bp | CTTCCTAAACCTTGCTTCCTGACACTGCTGGACGTGCCAGCGCCCTaGGAACATCTTTGGACATGGACTTTCGTCTCTCCTGGGCTTTTG | + |
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Preference number: 1 (lower is better) Translates to: LPKPCFLTLLDVPAP*EHLWTWTFVSPGLL Trigger: CAAAAGCCCAGGAGAGACGAAAGTCCATGTCCAAAGATGTTCTCAGGGCGCTGGCACGTCCAGCAGTGTCAGGAAGCAAGGTTTAGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR GCA 90 bp | GTGGAGAAACCTGCAGACACTTCTGACCATCAAGCCTCAGGCAGGTaGTTGGTATGTGGTTCCCAAGTCAAGTCACCAGCAGAGGGGATA | + |
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Preference number: 1 (lower is better) Translates to: VEKPADTSDHQASGR*LVCGSQVKSPAEGI Trigger: TATCCCCTCTGCTGGTGACTTGACTTGGGAACCACATACCAAGCACCTGCCTGAGGCTTGATGGTCAGAAGTGTCTGCAGGTTTCTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR GCA 90 bp | GTTAGGGCCAAGGTACAAACACGGCCACTGGTAATCCCAGCCCTATaGATGAGAGCATCAGGCAGTAGACAGGTGGAGCAGGGTACATAT | + |
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Preference number: 1 (lower is better) Translates to: VRAKVQTRPLVIPAL*MRASGSRQVEQGTY Trigger: ATATGTACCCTGCTCCACCTGTCTACTGCCTGATGCTCTCATGCATAGGGCTGGGATTACCAGTGGCCGTGTTTGTACCTTGGCCCTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR CCA 90 bp | GACGGTGGTCAGGGCCTGGCTCTTGGATGCTCAGCTGTCCTCCACTaGCTGACCCAGCAATTAGGTGGTTTCTCTAATCTCCCTAATTTT | + |
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Preference number: 1 (lower is better) Translates to: DGGQGLALGCSAVLH*LTQQLGGFSNLPNF Trigger: AAAATTAGGGAGATTAGAGAAACCACCTAATTGCTGGGTCAGCCAGTGGAGGACAGCTGAGCATCCAAGAGCCAGGCCCTGACCACCGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR CCA 90 bp | CACCTTCTGAAAGGTGGAGACATCTTGTGCCCCACTCCTGGGTATTaGCTTCTTCATGAACTTAGACCCAGAGACAGGAAGAGCACAGGC | + |
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Preference number: 1 (lower is better) Translates to: HLLKGGDILCPTPGY*LLHELRPRDRKSTG Trigger: GCCTGTGCTCTTCCTGTCTCTGGGTCTAAGTTCATGAAGAAGCCAATACCCAGGAGTGGGGCACAAGATGTCTCCACCTTTCAGAAGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR CCA 90 bp | AGAAACCTGCAGACACTTCTGACCATCAAGCCTCAGGCAGGTGCTTaGTATGTGGTTCCCAAGTCAAGTCACCAGCAGAGGGGATATCAG | + |
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Preference number: 1 (lower is better) Translates to: RNLQTLLTIKPQAGA*YVVPKSSHQQRGYQ Trigger: CTGATATCCCCTCTGCTGGTGACTTGACTTGGGAACCACATACCAAGCACCTGCCTGAGGCTTGATGGTCAGAAGTGTCTGCAGGTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR CCA 90 bp | GACTCTGAGTTCTCTAACAGTTCCATGGGCCATGTATTCTCTGTCTaGCCACTCCCTTCGCTAGCCCAACCATACCTGGACTCAAACATC | + |
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Preference number: 1 (lower is better) Translates to: DSEFSNSSMGHVFSV*PLPSLAQPYLDSNI Trigger: GATGTTTGAGTCCAGGTATGGTTGGGCTAGCGAAGGGAGTGGCCAGACAGAGAATACATGGCCCATGGAACTGTTAGAGAACTCAGAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR TCA 90 bp | GCTATCTTCCAAGGTAACATTAAGCCCCAAGTTAATCCAGTGGAGTaGTTCACAGCAAGCAGCAGGGGGAGGACTCCGCAGTACTCCTTA | + |
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Preference number: 1 (lower is better) Translates to: AIFQGNIKPQVNPVE*FTASSRGRTPQYSL Trigger: TAAGGAGTACTGCGGAGTCCTCCCCCTGCTGCTTGCTGTGAATCACTCCACTGGATTAACTTGGGGCTTAATGTTACCTTGGAAGATAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR TCA 90 bp | GAATCCACCAGCACTCTCAAGCAGTTTCTATCTACAAAGAGTAAATaGAGAGGTGTCAGCCCTCAGGCCACACCCCGAGAGATATGGAGC | + |
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Preference number: 1 (lower is better) Translates to: ESTSTLKQFLSTKSK*RGVSPQATPREIWS Trigger: GCTCCATATCTCTCGGGGTGTGGCCTGAGGGCTGACACCTCTTCATTTACTCTTTGTAGATAGAAACTGCTTGAGAGTGCTGGTGGATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR CCA 90 bp | ATTTGGCTATCTTCCAAGGTAACATTAAGCCCCAAGTTAATCCAGTaGAGTGATTCACAGCAAGCAGCAGGGGGAGGACTCCGCAGTACT | + |
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Preference number: 1 (lower is better) Translates to: IWLSSKVTLSPKLIQ*SDSQQAAGGGLRST Trigger: AGTACTGCGGAGTCCTCCCCCTGCTGCTTGCTGTGAATCACTCCACTGGATTAACTTGGGGCTTAATGTTACCTTGGAAGATAGCCAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR CCA 90 bp | AGCCATCTCCTGCGCAGGCCACACATCTTGAACCGCAAGCTGATATaGCAGTCGGTAATGATTTGGCTATCTTCCAAGGTAACATTAAGC | + |
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Preference number: 1 (lower is better) Translates to: SHLLRRPHILNRKLI*QSVMIWLSSKVTLS Trigger: GCTTAATGTTACCTTGGAAGATAGCCAAATCATTACCGACTGCCATATCAGCTTGCGGTTCAAGATGTGTGGCCTGCGCAGGAGATGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR GCA 90 bp | GTGTCGCACAGGGAAACATATAGAACAGATGTATATATAGACCGTTaGTTGCGGTCCTCAGGAGGGATGGTGACAGATCAAACCCCTAGA | + |
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Preference number: 1 (lower is better) Translates to: VSHRETYRTDVYIDR*LRSSGGMVTDQTPR Trigger: TCTAGGGGTTTGATCTGTCACCATCCCTCCTGAGGACCGCAAGCAACGGTCTATATATACATCTGTTCTATATGTTTCCCTGTGCGACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR TCA 90 bp | AGGTTTGCAAATAAACCAGCCCTCGTTAGTATCCTGGCCCCTCTGTaGTCCTTAAACCCATCGAAGCTTCAAGGCACAAACAAAGCAGTA | + |
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Preference number: 1 (lower is better) Translates to: RFANKPALVSILAPL*SLNPSKLQGTNKAV Trigger: TACTGCTTTGTTTGTGCCTTGAAGCTTCGATGGGTTTAAGGATCACAGAGGGGCCAGGATACTAACGAGGGCTGGTTTATTTGCAAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR CCA 90 bp | AGACAGGGCCATCAGTCTACCTACTCAGCCTGTTTCCACCAGACTTaGGTCAAAAGCCAGACAGAAAAGAAAGCTTGGCTTTATAAACAG | + |
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Preference number: 1 (lower is better) Translates to: RQGHQSTYSACFHQT*VKSQTEKKAWLYKQ Trigger: CTGTTTATAAAGCCAAGCTTTCTTTTCTGTCTGGCTTTTGACCCAAGTCTGGTGGAAACAGGCTGAGTAGGTAGACTGATGGCCCTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR-3UTR CCA 90 bp | TTCCATTGCAGGGAGGTACACAGATCAGCAGTGGCCATGGCTTTGCCAGTAGACTGGGCGATGCCAGGGTaGTCCCAGGGAGGGAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: FHCREVHRSAVAMALPVDWAMPG*SQGGRE Trigger: CTCCCTCCCTCCCTGGGACCACCCTGGCATCGCCCA...GTCTACTGGCAAAGCCATGGCCACTGCTGATCTGTGTACCTCCCTGCAATGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR-3UTR CCA 90 bp | CCCATCCTACCACCCCAGCCAGAAAGCAGTAAGATGTGGGCCTGTTCCTCCTCTTCTGGAGTGTGCACATaGGCGATGCCAGGGTGGTCC | + |
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Preference number: 2 (lower is better) Translates to: PILPPQPESSKMWACSSSSGVCT*AMPGWS Trigger: GGACCACCCTGGCATCGCCCATGTGCACACTCCAGA...AGAGGAGGAACAGGCCCACATCTTACTGCTTTCTGGCTGGGGTGGTAGGATGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR CAA 90 bp | ACTCCCTTCGCTAGCCCAACCATACCTGGACTCAAACATCCCTGTTaGCATCACCCACCAACACCCCAAGGGGTGGGCACCCTGGCACTT | + |
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Preference number: 2 (lower is better) Translates to: TPFASPTIPGLKHPC*HHPPTPQGVGTLAL Trigger: AAGTGCCAGGGTGCCCACCCCTTGGGGTGTTGGTGGGTGATGCAAACAGGGATGTTTGAGTCCAGGTATGGTTGGGCTAGCGAAGGGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR-3UTR TCA 90 bp | CGGCCACTGGTAATCCCAGCCCTATGCATGAGAGCATCAGGCAGTAGACAGGTGGCACCCTGCTGGTTCTaGGAATCCACCAGCACTCTC | + |
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Preference number: 2 (lower is better) Translates to: RPLVIPALCMRASGSRQVAPCWF*ESTSTL Trigger: GAGAGTGCTGGTGGATTCTCAGAACCAGCAGGGTGC...CACCTGTCTACTGCCTGATGCTCTCATGCATAGGGCTGGGATTACCAGTGGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR-3UTR GCA 90 bp | GCTAGGAATGAGACCAGAGAATGTCACCCTAGTCCACGCGGGCTGAGCTGGCCGCACCGTGCTGTGTTCTaGACAGATGCTTCTGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: ARNETRECHPSPRGLSWPHRAVF*TDASVQ Trigger: CTGCACAGAAGCATCTGTGCAGAACACAGCACGGTG...CGGCCAGCTCAGCCCGCGTGGACTAGGGTGACATTCTCTGGTCTCATTCCTAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR-3UTR CCA 90 bp | CGGCCACTGGTAATCCCAGCCCTATGCATGAGAGCATCAGGCAGTAGACAGGTGTCAGGGCCTGGCTCTTaGATGCTCAGCTGTCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: RPLVIPALCMRASGSRQVSGPGS*MLSCPP Trigger: TGGAGGACAGCTGAGCATCCAAGAGCCAGGCCCTGA...CACCTGTCTACTGCCTGATGCTCTCATGCATAGGGCTGGGATTACCAGTGGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR-3UTR CCA 90 bp | TTGCAGGGAGGTACACAGATCAGCAGTGGCCATGGCTTTGCCAGTAGACATGAGAGTGACTCAGGACAGTaGGGACAAGGCGCCAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: LQGGTQISSGHGFASRHESDSGQ*GQGAKS Trigger: GCTCTTGGCGCCTTGTCCCCACTGTCCTGAGTCACT...CTCATGTCTACTGGCAAAGCCATGGCCACTGCTGATCTGTGTACCTCCCTGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR-3UTR GCA 90 bp | TGCCTTAGACAGGGAGGTTTTACCCAGAAAGCAAGAGACAGTTCAGCAGGAGGAGGAGGGAGGGAGGCCTaGTTCCCAAGTGAGAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: CLRQGGFTQKARDSSAGGGGREA*FPSERR Trigger: TCTCCTCTCACTTGGGAAGCAGGCCTCCCTCCCTCC...TCCTCCTGCTGAACTGTCTCTTGCTTTCTGGGTAAAACCTCCCTGTCTAAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR-3UTR GCA 90 bp | TTCCATTGCAGGGAGGTACACAGATCAGCAGTGGCCATGGCTTTGCCAGTAGACGAACGGCTCACACCGTaGTGTGTTCTGCACAGATGC | + |
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Preference number: 2 (lower is better) Translates to: FHCREVHRSAVAMALPVDERLTP*CVLHRC Trigger: GCATCTGTGCAGAACACAGCACGGTGTGAGCCGTTC...GTCTACTGGCAAAGCCATGGCCACTGCTGATCTGTGTACCTCCCTGCAATGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR-3UTR GCA 90 bp | GGTTTTACCCAGAAAGCAAGAGACAGTTCAGCAGGAGGAGCGGAGGCTCACGCCCCACCCCACATTGAGTaGCACCTGTCTGAAGAACTT | + |
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Preference number: 2 (lower is better) Translates to: GFTQKARDSSAGGAEAHAPPHIE*HLSEEL Trigger: AAGTTCTTCAGACAGGTGGCACTCAATGTGGGGTGG...GGCGTGAGCCTCCGCTCCTCCTGCTGAACTGTCTCTTGCTTTCTGGGTAAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR-3UTR CCA 90 bp | CATCAGTCTACCTACTCAGCCTGTTTCCACCAGACTTGGGTCAAAAGCCAGACAGTCAGGAGACTGTCCTaGGCTGACAGGGAGAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: HQSTYSACFHQTWVKSQTVRRLS*ADRERL Trigger: GAGCCTCTCCCTGTCAGCCCAGGACAGTCTCCTGAC...TGTCTGGCTTTTGACCCAAGTCTGGTGGAAACAGGCTGAGTAGGTAGACTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR-3UTR CCA 90 bp | GCTAGGAATGAGACCAGAGAATGTCACCCTAGTCCACGCGGGCTGAGCTGGCCGGAAAGCAGTAAGATGTaGGCCTGTTCCTCCTCTTTA | + |
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Preference number: 2 (lower is better) Translates to: ARNETRECHPSPRGLSWPESSKM*ACSSSL Trigger: TAAAGAGGAGGAACAGGCCCACATCTTACTGCTTTC...CGGCCAGCTCAGCCCGCGTGGACTAGGGTGACATTCTCTGGTCTCATTCCTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR CAA 90 bp | CCACACAGATCACGTCAGTGGCCAGAAAGGCGTCACCACCCCACATaGAGTGCCACCTGTCTGAAGAACTTTAGAAGACCCGAGAGAATG | + |
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Preference number: 2 (lower is better) Translates to: PHRSRQWPERRHHPT*SATCLKNFRRPERM Trigger: CATTCTCTCGGGTCTTCTAAAGTTCTTCAGACAGGTGGCACTCAATGTGGGGTGGTGACGCCTTTCTGGCCACTGACGTGATCTGTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR-3UTR CCA 90 bp | GGGGAGGACTCCGCAGTACTCCTTAGATGTAAAAGGCCACACAGATCACGTCAGTCATCTCGACACTACTaGTCACTCCAGGGATCTCCC | + |
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Preference number: 2 (lower is better) Translates to: GEDSAVLLRCKRPHRSRQSSRHY*SLQGSP Trigger: GGGAGATCCCTGGAGTGACCAGTAGTGTCGAGATGA...CTGACGTGATCTGTGTGGCCTTTTACATCTAAGGAGTACTGCGGAGTCCTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR CAA 90 bp | GAGAAACCTGCAGACACTTCTGACCATCAAGCCTCAGGCAGGTGCTaGGTATGTGGTTCCCAAGTCAAGTCACCAGCAGAGGGGATATCA | + |
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Preference number: 2 (lower is better) Translates to: EKPADTSDHQASGRC*VCGSQVKSPAEGIS Trigger: TGATATCCCCTCTGCTGGTGACTTGACTTGGGAACCACATACCAAGCACCTGCCTGAGGCTTGATGGTCAGAAGTGTCTGCAGGTTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR-3UTR TCA 90 bp | TGCCTTAGACAGGGAGGTTTTACCCAGAAAGCAAGAGACAGTTCAGCAGGAGGAGGGACTGTCCAGAAATaGCCAGGATCTCACGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: CLRQGGFTQKARDSSAGGGTVQK*PGSHEL Trigger: CAGCTCGTGAGATCCTGGTCATTTCTGGACAGTCCC...TCCTCCTGCTGAACTGTCTCTTGCTTTCTGGGTAAAACCTCCCTGTCTAAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR-3UTR CCA 90 bp | TCAGAAGGAACTGGGGGCATAATAAAAAGCACATTAGAGGCTCGCTCCAGGCATGAGAGATATGGAGCGTaGGGTGGGGGAGGGGAAATG | + |
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Preference number: 2 (lower is better) Translates to: SEGTGGIIKSTLEARSRHERYGA*GGGGEM Trigger: CATTTCCCCTCCCCCACCCCACGCTCCATATCTCTC...ATGCCTGGAGCGAGCCTCTAATGTGCTTTTTATTATGCCCCCAGTTCCTTCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR-3UTR GCA 90 bp | GCCTTAGACAGGGAGGTTTTACCCAGAAAGCAAGAGACAGTTCAGCAGGAGGAGGGCAAGGAGAAGGGCTaGTTTCTTTGTTCAGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: ALDREVLPRKQETVQQEEGKEKG*FLCSEG Trigger: TCCCTCTGAACAAAGAAAGCAGCCCTTCTCCTTGCC...CTCCTCCTGCTGAACTGTCTCTTGCTTTCTGGGTAAAACCTCCCTGTCTAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR-3UTR CCA 90 bp | CATCAGTCTACCTACTCAGCCTGTTTCCACCAGACTTGGGTCAAAAGCCAGACAATCCTGAGGCATGAGTaGAGAGATTGTGAGGGTCCC | + |
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Preference number: 2 (lower is better) Translates to: HQSTYSACFHQTWVKSQTILRHE*RDCEGP Trigger: GGGACCCTCACAATCTCTCCACTCATGCCTCAGGAT...TGTCTGGCTTTTGACCCAAGTCTGGTGGAAACAGGCTGAGTAGGTAGACTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR-3UTR CCA 90 bp | TCAGAAGGAACTGGGGGCATAATAAAAAGCACATTAGAGGCTCGCTCCAGGCATTCAGCTGTCCTCCACTaGCTGACCCAGCAATTAGGT | + |
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Preference number: 2 (lower is better) Translates to: SEGTGGIIKSTLEARSRHSAVLH*LTQQLG Trigger: ACCTAATTGCTGGGTCAGCCAGTGGAGGACAGCTGA...ATGCCTGGAGCGAGCCTCTAATGTGCTTTTTATTATGCCCCCAGTTCCTTCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR-3UTR CCA 90 bp | TTGCAGGGAGGTACACAGATCAGCAGTGGCCATGGCTTTGCCAGTAGACATGAGCTAGGTAGGAAATGCTaGCCATGCTTTGAAACCCAA | + |
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Preference number: 2 (lower is better) Translates to: LQGGTQISSGHGFASRHELGRKC*PCFETQ Trigger: TTGGGTTTCAAAGCATGGCCAGCATTTCCTACCTAG...CTCATGTCTACTGGCAAAGCCATGGCCACTGCTGATCTGTGTACCTCCCTGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR-3UTR CCA 90 bp | GAGAAACCACAACACAAGTATTCAGGTTTGCAAATAAACCAGCCCTCGTTAGTAGGAGATGGGCAGGGATaGGGGATGGGCCTAGGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: EKPQHKYSGLQINQPSLVGDGQG*GMGLGV Trigger: CACACCTAGGCCCATCCCCCATCCCTGCCCATCTCC...TACTAACGAGGGCTGGTTTATTTGCAAACCTGAATACTTGTGTTGTGGTTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGTTTGGGTTTGGGGCTTGTGTTTTCCTTTCAGAAGGAACTGGG | + |
|
Preference number: 2 (lower is better) Translates to: VCVCVCVCVCVCVCV*FGFGACVFLSEGTG Trigger: CCCAGTTCCTTCTGAAAGGAAAACACAAGCCCCAAACCCAAACAACACACACACACACACACACACACACACACACACACACACACACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR-3UTR TCA 90 bp | CATCAGTCTACCTACTCAGCCTGTTTCCACCAGACTTGGGTCAAAAGCCAGACATTGTTCAGAGGGAGATaGGTAAACCAAGGGACTGTC | + |
|
Preference number: 2 (lower is better) Translates to: HQSTYSACFHQTWVKSQTLFRGR*VNQGTV Trigger: GACAGTCCCTTGGTTTACTCATCTCCCTCTGAACAA...TGTCTGGCTTTTGACCCAAGTCTGGTGGAAACAGGCTGAGTAGGTAGACTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR-3UTR CCA 90 bp | GCCTTAGACAGGGAGGTTTTACCCAGAAAGCAAGAGACAGTTCAGCAGGAGGAGCCCAAGTTAATCCAGTaGAGTGATTCACAGCAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: ALDREVLPRKQETVQQEEPKLIQ*SDSQQA Trigger: TGCTTGCTGTGAATCACTCCACTGGATTAACTTGGG...CTCCTCCTGCTGAACTGTCTCTTGCTTTCTGGGTAAAACCTCCCTGTCTAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR-3UTR GCA 90 bp | CCTGGAGAAACCACAACACAAGTATTCAGGTTTGCAAATAAACCAGCCCTCGTTCAAGCCTCAGGCAGGTaGTTGGTATGTGGTTCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: PGETTTQVFRFANKPALVQASGR*LVCGSQ Trigger: TTGGGAACCACATACCAAGCACCTGCCTGAGGCTTG...AACGAGGGCTGGTTTATTTGCAAACCTGAATACTTGTGTTGTGGTTTCTCCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR-3UTR CCA 90 bp | TTGCAGGGAGGTACACAGATCAGCAGTGGCCATGGCTTTGCCAGTAGACATGAGCAGTCGGTAATGATTTaGCTATCTTCCAAGGTAACA | + |
|
Preference number: 2 (lower is better) Translates to: LQGGTQISSGHGFASRHEQSVMI*LSSKVT Trigger: TGTTACCTTGGAAGATAGCCAAATCATTACCGACTG...CTCATGTCTACTGGCAAAGCCATGGCCACTGCTGATCTGTGTACCTCCCTGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR-3UTR CCA 90 bp | GAGAAACCACAACACAAGTATTCAGGTTTGCAAATAAACCAGCCCTCGTTAGTATCAAGTCAGAAAGGATaGGCCCTGGCGGAAGCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: EKPQHKYSGLQINQPSLVSSQKG*ALAEAS Trigger: GCTGGCTTCCGCCAGGGCCCATCCTTTCTGACTTGA...TACTAACGAGGGCTGGTTTATTTGCAAACCTGAATACTTGTGTTGTGGTTTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR CAA 90 bp | TCGCACAGGGAAACATATAGAACAGATGTATATATAGACCGTTGCTaGCGGTCCTCAGGAGGGATGGTGACAGATCAAACCCCTAGATAC | + |
|
Preference number: 2 (lower is better) Translates to: SHRETYRTDVYIDRC*RSSGGMVTDQTPRY Trigger: GTATCTAGGGGTTTGATCTGTCACCATCCCTCCTGAGGACCGCAAGCAACGGTCTATATATACATCTGTTCTATATGTTTCCCTGTGCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR-3UTR TCA 90 bp | GCACAGGCTCCTGGAAAAATGGGTCTTTTCAATGTGAATATACTAGCTGCAGGTGTTAATCCAGTGGAGTaGTTCACAGCAAGCAGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: AQAPGKMGLFNVNILAAGVNPVE*FTASSR Trigger: CCTGCTGCTTGCTGTGAATCACTCCACTGGATTAAC...ACCTGCAGCTAGTATATTCACATTGAAAAGACCCATTTTTCCAGGAGCCTGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR-3UTR TCA 90 bp | GCACAGGCTCCTGGAAAAATGGGTCTTTTCAATGTGAATATACTAGCTGCAGGTATGCTGGCCATGCTTTaGAACCCAATGGGACTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: AQAPGKMGLFNVNILAAGMLAML*NPMGLF Trigger: GAAGAGTCCCATTGGGTTTCAAAGCATGGCCAGCAT...ACCTGCAGCTAGTATATTCACATTGAAAAGACCCATTTTTCCAGGAGCCTGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR-3UTR CCA 90 bp | GAGAAACCACAACACAAGTATTCAGGTTTGCAAATAAACCAGCCCTCGTTAGTATATTCCCCGGCTCAGTaGAGCAGTGGACACAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: EKPQHKYSGLQINQPSLVYSPAQ*SSGHRK Trigger: CTTTCTGTGTCCACTGCTCCACTGAGCCGGGGAATA...TACTAACGAGGGCTGGTTTATTTGCAAACCTGAATACTTGTGTTGTGGTTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR-3UTR CCA 90 bp | CCTGGAGAAACCACAACACAAGTATTCAGGTTTGCAAATAAACCAGCCCTCGTTTCAACTGTAAACACATaGTTAGGCTGCCTTAGACAG | + |
|
Preference number: 2 (lower is better) Translates to: PGETTTQVFRFANKPALVSTVNT*LGCLRQ Trigger: CTGTCTAAGGCAGCCTAACCATGTGTTTACAGTTGA...AACGAGGGCTGGTTTATTTGCAAACCTGAATACTTGTGTTGTGGTTTCTCCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR-3UTR GCA 90 bp | TTTGATTTTACAACACATAAGTATGGGAGGGGTCTTGCCAGTGTACAATGTATTCAATCTTCCAGAAACTaGCCGGGTCAGACTCTCATT | + |
|
Preference number: 2 (lower is better) Translates to: FDFTTHKYGRGLASVQCIQSSRN*PGQTLI Trigger: AATGAGAGTCTGACCCGGGCAGTTTCTGGAAGATTG...AATACATTGTACACTGGCAAGACCCCTCCCATACTTATGTGTTGTAAAATCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR-3UTR GCA 90 bp | GAGAAACCACAACACAAGTATTCAGGTTTGCAAATAAACCAGCCCTCGTTAGTAGTAGCACGTTTCACTTaGACCACTGTGACAATCAAA | + |
|
Preference number: 2 (lower is better) Translates to: EKPQHKYSGLQINQPSLVVARFT*TTVTIK Trigger: TTTGATTGTCACAGTGGTGCAAGTGAAACGTGCTAC...TACTAACGAGGGCTGGTTTATTTGCAAACCTGAATACTTGTGTTGTGGTTTCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR GCA 72 bp | AGGCTCACTAGCCATCTGGAGTGTGCACATGGGCGATaGCAGGGTGGTCCCAGGGAGGGAGGGAGGCCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: RLTSHLECAHGR*QGGPREGGRPA Trigger: AGCAGGCCTCCCTCCCTCCCTGGGACCACCCTGGCATCGCCCATGTGCACACTCCAGATGGCTAGTGAGCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR GCA 72 bp | GCTCACACCGTGCTGTGTTCTGCACAGATGCTTCTGTaGAGACCCGGGACCCCATCCTACCACCCCAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: AHTVLCSAQMLL*RPGTPSYHPSQ Trigger: CTGGCTGGGGTGGTAGGATGGGGTCCCGGGTCTGCACAGAAGCATCTGTGCAGAACACAGCACGGTGTGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR CCA 72 bp | GACAAAGTGCCTGGACGGTGGTCAGGGCCTGGCTCTTaGATGCTCAGCTGTCCTCCACTGGCTGACCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: DKVPGRWSGPGS*MLSCPPLADPA Trigger: TGCTGGGTCAGCCAGTGGAGGACAGCTGAGCATCCAAGAGCCAGGCCCTGACCACCGTCCAGGCACTTTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR GCA 72 bp | CCTGAACGGCTCACACCGTGCTGTGTTCTGCACAGATaGTTCTGTGCAGACCCGGGACCCCATCCTACCACC | + |
|
Preference number: 3 (lower is better) Translates to: PERLTPCCVLHR*FCADPGPHPTT Trigger: GGTGGTAGGATGGGGTCCCGGGTCTGCACAGAAGCATCTGTGCAGAACACAGCACGGTGTGAGCCGTTCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR GCA 72 bp | GGCTCACACCTGAACGGCTCACACCGTGCTGTGTTCTaGACAGATGCTTCTGTGCAGACCCGGGACCCCATC | + |
|
Preference number: 3 (lower is better) Translates to: GSHLNGSHRAVF*TDASVQTRDPI Trigger: GATGGGGTCCCGGGTCTGCACAGAAGCATCTGTGCAGAACACAGCACGGTGTGAGCCGTTCAGGTGTGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR CCA 72 bp | ACGCGGGCTGAGCTGGCCGTCTCATCTCGACACTACTaGTCACTCCAGGGATCTCCCGTCTTCTGTGCTCGA | + |
|
Preference number: 3 (lower is better) Translates to: TRAELAVSSRHY*SLQGSPVFCAR Trigger: TCGAGCACAGAAGACGGGAGATCCCTGGAGTGACCAGTAGTGTCGAGATGAGACGGCCAGCTCAGCCCGCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR GCA 72 bp | CGAGATGAGCGGCTCACACCTGAACGGCTCACACCGTaGTGTGTTCTGCACAGATGCTTCTGTGCAGACCCG | + |
|
Preference number: 3 (lower is better) Translates to: RDERLTPERLTP*CVLHRCFCADP Trigger: CGGGTCTGCACAGAAGCATCTGTGCAGAACACAGCACGGTGTGAGCCGTTCAGGTGTGAGCCGCTCATCTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR GCA 72 bp | AGGATGGGCCCTGGCGGAAGCCAGCCATGTTTCCATTaGAGGGAGGTACACAGATCAGCAGTGGCCATGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RMGPGGSQPCFH*REVHRSAVAMA Trigger: AGCCATGGCCACTGCTGATCTGTGTACCTCCCTGCAATGGAAACATGGCTGGCTTCCGCCAGGGCCCATCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR GCA 72 bp | CTAGCCCAACCATACCTGGACTCAAACATCCCTGTTTaGATCACCCACCAACACCCCAAGGGGTGGGCACCC | + |
|
Preference number: 3 (lower is better) Translates to: LAQPYLDSNIPV*ITHQHPKGWAP Trigger: GGGTGCCCACCCCTTGGGGTGTTGGTGGGTGATGCAAACAGGGATGTTTGAGTCCAGGTATGGTTGGGCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR CCA 72 bp | TGCAGTGTTTTCAGGCAGCCTAGGAGACAAAGTGCCTaGACGGTGGTCAGGGCCTGGCTCTTGGATGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: CSVFRQPRRQSA*TVVRAWLLDAQ Trigger: CTGAGCATCCAAGAGCCAGGCCCTGACCACCGTCCAGGCACTTTGTCTCCTAGGCTGCCTGAAAACACTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR TCA 72 bp | CCAGGATCTCACGAGCTGGCAGCAAACCAGCTTTGGTaGCATTGGGGGTGTGAGCTGATCCTGAGGCATGAG | + |
|
Preference number: 3 (lower is better) Translates to: PGSHELAANQLW*HWGCELILRHE Trigger: CTCATGCCTCAGGATCAGCTCACACCCCCAATGTCACCAAAGCTGGTTTGCTGCCAGCTCGTGAGATCCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR CCA 72 bp | GGGATAGTCTTGCATCTTGTGGTCAGGAGACTGTCCTaGGCTGACAGGGAGAGGCTCACTAGCCATCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: GIVLHLVVRRLS*ADRERLTSHLE Trigger: CTCCAGATGGCTAGTGAGCCTCTCCCTGTCAGCCCAGGACAGTCTCCTGACCACAAGATGCAAGACTATCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR CCA 72 bp | TGTCGGGCAGCACTGTTGGGGCACATGCTTCCTCGCTaGGATAGTCTTGCATCTTGTGGTCAGGAGACTGTC | + |
|
Preference number: 3 (lower is better) Translates to: CRAALLGHMLPR*DSLASCGQETV Trigger: GACAGTCTCCTGACCACAAGATGCAAGACTATCCCAGCGAGGAAGCATGTGCCCCAACAGTGCTGCCCGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR CCA 72 bp | TTTGGCTACACCATATTCCCCGGCTCAGTGGAGCAGTaGACACAGAAAGACCAGGCGAGCGTAACGGAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: FGYTIFPGSVEQ*TQKDQASVTEV Trigger: CACCTCCGTTACGCTCGCCTGGTCTTTCTGTGTCCACTGCTCCACTGAGCCGGGGAATATGGTGTAGCCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR TCA 72 bp | CCTTGCTTCCTGACACTGCTGGACGTGCCAGCGCCCTaGGAACATCTTTGGACATGGACTTTCGTCTCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: PCFLTLLDVPAP*EHLWTWTFVSP Trigger: AGGAGAGACGAAAGTCCATGTCCAAAGATGTTCTCAGGGCGCTGGCACGTCCAGCAGTGTCAGGAAGCAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR GCA 72 bp | AAGGTACAAACACGGCCACTGGTAATCCCAGCCCTATaGATGAGAGCATCAGGCAGTAGACAGGTGGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: KVQTRPLVIPAL*MRASGSRQVEQ Trigger: CTGCTCCACCTGTCTACTGCCTGATGCTCTCATGCATAGGGCTGGGATTACCAGTGGCCGTGTTTGTACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR CCA 72 bp | CTCCTTAGATGTAAAAGGCCACACAGATCACGTCAGTaGCCAGAAAGGCGTCACCACCCCACATTGAGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: LLRCKRPHRSRQ*PERRHHPTLSA Trigger: GGCACTCAATGTGGGGTGGTGACGCCTTTCTGGCCACTGACGTGATCTGTGTGGCCTTTTACATCTAAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR CCA 72 bp | TGTGCACCCACCCTTCCACAAATATACACGGGGGTGTaGGGTGGGAGGGTTAATGTCTCTATAGACACCACC | + |
|
Preference number: 3 (lower is better) Translates to: CAPTLPQIYTGV*GGRVNVSIDTT Trigger: GGTGGTGTCTATAGAGACATTAACCCTCCCACCCCACACCCCCGTGTATATTTGTGGAAGGGTGGGTGCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR CCA 72 bp | CAGACACTTCTGACCATCAAGCCTCAGGCAGGTGCTTaGTATGTGGTTCCCAAGTCAAGTCACCAGCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: QTLLTIKPQAGA*YVVPKSSHQQR Trigger: CCTCTGCTGGTGACTTGACTTGGGAACCACATACCAAGCACCTGCCTGAGGCTTGATGGTCAGAAGTGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR CCA 72 bp | TCAGCACGTGTAACAGGATGGTCCAGGAAGGCTCCTTaGTCATCACCGTGTCTCAAGACCTTTGGCTACACC | + |
|
Preference number: 3 (lower is better) Translates to: SARVTGWSRKAP*SSPCLKTFGYT Trigger: GGTGTAGCCAAAGGTCTTGAGACACGGTGATGACCAAGGAGCCTTCCTGGACCATCCTGTTACACGTGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR CCA 72 bp | ATCTGTGGGGACATAAGATGCTCAAGTCAGAAAGGATaGGCCCTGGCGGAAGCCAGCCATGTTTCCATTGCA | + |
|
Preference number: 3 (lower is better) Translates to: ICGDIRCSSQKG*ALAEASHVSIA Trigger: TGCAATGGAAACATGGCTGGCTTCCGCCAGGGCCCATCCTTTCTGACTTGAGCATCTTATGTCCCCACAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR CCA 72 bp | TTCTCTAACAGTTCCATGGGCCATGTATTCTCTGTCTaGCCACTCCCTTCGCTAGCCCAACCATACCTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: FSNSSMGHVFSV*PLPSLAQPYLD Trigger: GTCCAGGTATGGTTGGGCTAGCGAAGGGAGTGGCCAGACAGAGAATACATGGCCCATGGAACTGTTAGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR CCA 72 bp | CATTCAGCGCTGACTCTGAGTTCTCTAACAGTTCCATaGGCCATGTATTCTCTGTCTGGCCACTCCCTTCGC | + |
|
Preference number: 3 (lower is better) Translates to: HSALTLSSLTVP*AMYSLSGHSLR Trigger: GCGAAGGGAGTGGCCAGACAGAGAATACATGGCCCATGGAACTGTTAGAGAACTCAGAGTCAGCGCTGAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR-3UTR CAA 90 bp | GAGAAACCACAACACAAGTATTCAGGTTTGCAAATAAACCAGCCCTCGTTAGTACGCCAGGGCCTGTGTTaGCTCCTGTGTCGCACAGGG | + |
|
Preference number: 3 (lower is better) Translates to: EKPQHKYSGLQINQPSLVRQGLC*LLCRTG Trigger: CCCTGTGCGACACAGGAGCAAACACAGGCCCTGGCG...TACTAACGAGGGCTGGTTTATTTGCAAACCTGAATACTTGTGTTGTGGTTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR TCA 72 bp | AGCACTCTCAAGCAGTTTCTATCTACAAAGAGTAAATaGAGAGGTGTCAGCCCTCAGGCCACACCCCGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: STLKQFLSTKSK*RGVSPQATPRE Trigger: CTCTCGGGGTGTGGCCTGAGGGCTGACACCTCTTCATTTACTCTTTGTAGATAGAAACTGCTTGAGAGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR CCA 72 bp | TCTTCCAAGGTAACATTAAGCCCCAAGTTAATCCAGTaGAGTGATTCACAGCAAGCAGCAGGGGGAGGACTC | + |
|
Preference number: 3 (lower is better) Translates to: SSKVTLSPKLIQ*SDSQQAAGGGL Trigger: GAGTCCTCCCCCTGCTGCTTGCTGTGAATCACTCCACTGGATTAACTTGGGGCTTAATGTTACCTTGGAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR CCA 72 bp | CTGCGCAGGCCACACATCTTGAACCGCAAGCTGATATaGCAGTCGGTAATGATTTGGCTATCTTCCAAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: LRRPHILNRKLI*QSVMIWLSSKV Trigger: TACCTTGGAAGATAGCCAAATCATTACCGACTGCCATATCAGCTTGCGGTTCAAGATGTGTGGCCTGCGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR CCA 72 bp | AAAGGTGGAGACATCTTGTGCCCCACTCCTGGGTATTaGCTTCTTCATGAACTTAGACCCAGAGACAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: KGGDILCPTPGY*LLHELRPRDRK Trigger: CTTCCTGTCTCTGGGTCTAAGTTCATGAAGAAGCCAATACCCAGGAGTGGGGCACAAGATGTCTCCACCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR CCA 72 bp | TACAAGCTGCTGGCTGAAACGTCAACTGTAAACACATaGTTAGGCTGCCTTAGACAGGGAGGTTTTACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: YKLLAETSTVNT*LGCLRQGGFTQ Trigger: CTGGGTAAAACCTCCCTGTCTAAGGCAGCCTAACCATGTGTTTACAGTTGACGTTTCAGCCAGCAGCTTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR CCA 72 bp | CATCAGTCTACCTACTCAGCCTGTTTCCACCAGACTTaGGTCAAAAGCCAGACAGAAAAGAAAGCTTGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: HQSTYSACFHQT*VKSQTEKKAWL Trigger: AAGCCAAGCTTTCTTTTCTGTCTGGCTTTTGACCCAAGTCTGGTGGAAACAGGCTGAGTAGGTAGACTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR-3UTR CAA 90 bp | AGAGACAGGAAGAGCACAGGCTCCTGGAAAAATGGGTCTTTTCAATGTGAATATGTTTGGGTTTGGGGCTaGTGTTTTCCTTTCAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: RDRKSTGSWKNGSFQCEYVWVWG*CFPFRR Trigger: CCTTCTGAAAGGAAAACACAAGCCCCAAACCCAAAC...ATATTCACATTGAAAAGACCCATTTTTCCAGGAGCCTGTGCTCTTCCTGTCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR GCA 72 bp | AGGGAAACATATAGAACAGATGTATATATAGACCGTTaGTTGCGGTCCTCAGGAGGGATGGTGACAGATCAA | + |
|
Preference number: 3 (lower is better) Translates to: RETYRTDVYIDR*LRSSGGMVTDQ Trigger: TTGATCTGTCACCATCCCTCCTGAGGACCGCAAGCAACGGTCTATATATACATCTGTTCTATATGTTTCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR-3UTR CAA 90 bp | AGAGACAGGAAGAGCACAGGCTCCTGGAAAAATGGGTCTTTTCAATGTGAATATGCAGTCGGTAATGATTaGGCTATCTTCCAAGGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: RDRKSTGSWKNGSFQCEYAVGND*AIFQGN Trigger: GTTACCTTGGAAGATAGCCAAATCATTACCGACTGC...ATATTCACATTGAAAAGACCCATTTTTCCAGGAGCCTGTGCTCTTCCTGTCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR CCA 72 bp | TTTAGAATGTCTAAGTTCCAGCTAGGTAGGAAATGCTaGCCATGCTTTGAAACCCAATGGGACTCTTCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: FRMSKFQLGRKC*PCFETQWDSSL Trigger: CAAAGAAGAGTCCCATTGGGTTTCAAAGCATGGCCAGCATTTCCTACCTAGCTGGAACTTAGACATTCTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR TCA 72 bp | ATGAAGGCAAACAGACGCGGTTTGAATTATATAACATaGCATACATTCAGCGCTGACTCTGAGTTCTCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: MKANRRGLNYIT*HTFSADSEFSN Trigger: GTTAGAGAACTCAGAGTCAGCGCTGAATGTATGTCATGTTATATAATTCAAACCGCGTCTGTTTGCCTTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| CDS-3UTR GCA 90 bp | GCTAGGAATGAGACCAGAGAATGTCACCCTAGTCCACGCGGGCTGAGCTGGCCGCCCCTGTGGTGGCGATaGAGTCAAAGCCCACGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ARNETRECHPSPRGLSWPPLWWR*SQSPRR Trigger: CCTTCGTGGGCTTTGACTGCATCGCCACCACAGGGG...CGGCCAGCTCAGCCCGCGTGGACTAGGGTGACATTCTCTGGTCTCATTCCTAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS-3UTR CCA 90 bp | ACTCGGGAGCCTGAGGCAGAGGCCACACTGGGCAACGATAATCCTATTCCAGGCCGGCGCAGCATCTGCTaGCCCAGACCGAGCAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TREPEAEATLGNDNPIPGRRSIC*PRPSRF Trigger: AAACCTGCTCGGTCTGGGCCAGCAGATGCTGCGCCG...GCCTGGAATAGGATTATCGTTGCCCAGTGTGGCCTCTGCCTCAGGCTCCCGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS-3UTR TCA 90 bp | CCCGGGACCCCATCCTACCACCCCAGCCAGAAAGCAGTAAGATGTGGGCCTGTTCAGGCTGTCTCCAGATaGTGCCTGTCACCAGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: PGTPSYHPSQKAVRCGPVQAVSR*CLSPAC Trigger: GCATGCTGGTGACAGGCATCATCTGGAGACAGCCTG...AACAGGCCCACATCTTACTGCTTTCTGGCTGGGGTGGTAGGATGGGGTCCCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR CAA 72 bp | AAGGATGGGCCCTGGCGGAAGCCAGCCATGTTTCCATaGCAGGGAGGTACACAGATCAGCAGTGGCCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: KDGPWRKPAMFP*QGGTQISSGHG Trigger: GCCATGGCCACTGCTGATCTGTGTACCTCCCTGCAATGGAAACATGGCTGGCTTCCGCCAGGGCCCATCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| CDS-3UTR GCA 90 bp | CCCATCCTACCACCCCAGCCAGAAAGCAGTAAGATGTGGGCCTGTTCCTCCTCTTCTTCCCAGCCCTGGTaGTTGAAGGCACCAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PILPPQPESSKMWACSSSSSQPW*LKAPGS Trigger: GCTGCCTGGTGCCTTCAAGCACCAGGGCTGGGAAGA...AGAGGAGGAACAGGCCCACATCTTACTGCTTTCTGGCTGGGGTGGTAGGATGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS-3UTR GCA 90 bp | ACCCAGAAAGCAAGAGACAGTTCAGCAGGAGGAGCGGAGGCTCACGCCTATGCTCAAACCGGACCCACGTaGCCTGGTCCAGCTGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: TQKARDSSAGGAEAHAYAQTGPT*PGPAAS Trigger: TGATGCAGCTGGACCAGGGCACGTGGGTCCGGTTTG...AGCATAGGCGTGAGCCTCCGCTCCTCCTGCTGAACTGTCTCTTGCTTTCTGGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS-3UTR CCA 90 bp | ACCCAGAAAGCAAGAGACAGTTCAGCAGGAGGAGCGGAGGCTCACGCCTATGCTCGGACCCACGTGCCCTaGTCCAGCTGCATCATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TQKARDSSAGGAEAHAYARTHVP*SSCIMR Trigger: TCTCATGATGCAGCTGGACCAGGGCACGTGGGTCCG...AGCATAGGCGTGAGCCTCCGCTCCTCCTGCTGAACTGTCTCTTGCTTTCTGGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS-3UTR CCA 90 bp | ACCCAGAAAGCAAGAGACAGTTCAGCAGGAGGAGCGGAGGCTCACGCCTATGCTTCAGGAGTCTTTGCCTaGCCAGCAGCCAGGGACGCT | + |
|
Preference number: 4 (lower is better) Translates to: TQKARDSSAGGAEAHAYASGVFA*PAARDA Trigger: AGCGTCCCTGGCTGCTGGCCAGGCAAAGACTCCTGA...AGCATAGGCGTGAGCCTCCGCTCCTCCTGCTGAACTGTCTCTTGCTTTCTGGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| CDS-3UTR GCA 90 bp | ACCCAGAAAGCAAGAGACAGTTCAGCAGGAGGAGCGGAGGCTCACGCCTATGCTTGCCTGTCACCAGCATaGAGAGGAGGACTGACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TQKARDSSAGGAEAHAYACLSPA*RGGLTL Trigger: CAGGGTCAGTCCTCCTCTGCATGCTGGTGACAGGCA...AGCATAGGCGTGAGCCTCCGCTCCTCCTGCTGAACTGTCTCTTGCTTTCTGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR CAA 72 bp | GCTAGCCCAACCATACCTGGACTCAAACATCCCTGTTaGCATCACCCACCAACACCCCAAGGGGTGGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: ASPTIPGLKHPC*HHPPTPQGVGT Trigger: GGTGCCCACCCCTTGGGGTGTTGGTGGGTGATGCAAACAGGGATGTTTGAGTCCAGGTATGGTTGGGCTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| CDS-3UTR GCA 90 bp | TTGCAGGGAGGTACACAGATCAGCAGTGGCCATGGCTTTGCCAGTAGACATGAGGGAGGGACGCCACGATaGCCACAGGAATGGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LQGGTQISSGHGFASRHEGGTPR*PQEWPS Trigger: AGAAGGCCATTCCTGTGGGCATCGTGGCGTCCCTCC...CTCATGTCTACTGGCAAAGCCATGGCCACTGCTGATCTGTGTACCTCCCTGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS-3UTR GCA 90 bp | CAGATGCTTCTGTGCAGACCCGGGACCCCATCCTACCACCCCAGCCAGAAAGCAAGAGCCAATGGCCACTaGGTACTTAGCTTCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QMLLCRPGTPSYHPSQKARANGH*VLSFFP Trigger: TGGGAAGAAGCTAAGTACGCAGTGGCCATTGGCTCT...TGCTTTCTGGCTGGGGTGGTAGGATGGGGTCCCGGGTCTGCACAGAAGCATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| CDS-3UTR GCA 90 bp | GGTTTTACCCAGAAAGCAAGAGACAGTTCAGCAGGAGGAGCGGAGGCTCACGCCGAGACTGGTGGAAAGTaGGCAGAGAGAGCCAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: GFTQKARDSSAGGAEAHAETGGK*AERANG Trigger: GCCATTGGCTCTCTCTGCGCACTTTCCACCAGTCTC...GGCGTGAGCCTCCGCTCCTCCTGCTGAACTGTCTCTTGCTTTCTGGGTAAAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| CDS-3UTR GCA 90 bp | GCTAGGAATGAGACCAGAGAATGTCACCCTAGTCCACGCGGGCTGAGCTGGCCGTGCACTGGTCCAAGTTaGTGTCAGGAGTCTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ARNETRECHPSPRGLSWPCTGPS*CQESLP Trigger: AGGCAAAGACTCCTGACAGCAACTTGGACCAGTGCA...CGGCCAGCTCAGCCCGCGTGGACTAGGGTGACATTCTCTGGTCTCATTCCTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS-3UTR CCA 90 bp | CAGATGCTTCTGTGCAGACCCGGGACCCCATCCTACCACCCCAGCCAGAAAGCAACAGGAATGGCCTTCTaGGGGTTCTTGACTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QMLLCRPGTPSYHPSQKATGMAF*GFLTSS Trigger: GGAAGAAGTCAAGAACCCCCAGAAGGCCATTCCTGT...TGCTTTCTGGCTGGGGTGGTAGGATGGGGTCCCGGGTCTGCACAGAAGCATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR CAA 72 bp | CACTGTTGGGGCACATGCTTCCTCGCTGGGATAGTCTaGCATCTTGTGGTCAGGAGACTGTCCTGGGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HCWGTCFLAGIV*HLVVRRLSWAD Trigger: GTCAGCCCAGGACAGTCTCCTGACCACAAGATGCAAGACTATCCCAGCGAGGAAGCATGTGCCCCAACAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS-3UTR TCA 90 bp | GCTGGCCGTCTCATCTCGACACTACTGGTCACTCCAGGGATCTCCCGTCTTCTGTTTGTTGACCATGGCTaGCTCCTTCACGCCAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: AGRLISTLLVTPGISRLLFVDHG*LLHAKS Trigger: ACTCTTGGCGTGAAGGAGTCAGCCATGGTCAACAAA...CAGAAGACGGGAGATCCCTGGAGTGACCAGTAGTGTCGAGATGAGACGGCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS-3UTR CCA 90 bp | TTGCAGGGAGGTACACAGATCAGCAGTGGCCATGGCTTTGCCAGTAGACATGAGGGGGCATGGGAAACATaGAGCCTAGGAGACTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQGGTQISSGHGFASRHEGAWET*SLGDWW Trigger: CCACCAGTCTCCTAGGCTCCATGTTTCCCATGCCCC...CTCATGTCTACTGGCAAAGCCATGGCCACTGCTGATCTGTGTACCTCCCTGCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS-3UTR GCA 90 bp | CGGCCACTGGTAATCCCAGCCCTATGCATGAGAGCATCAGGCAGTAGACAGGTGACTCTCCGATGGGCTTaGCTATCAGCTCGTCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RPLVIPALCMRASGSRQVTLRWA*LSARQK Trigger: CTTTTGACGAGCTGATAGGCAAGCCCATCGGAGAGT...CACCTGTCTACTGCCTGATGCTCTCATGCATAGGGCTGGGATTACCAGTGGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS-3UTR GCA 90 bp | TTGCAGGGAGGTACACAGATCAGCAGTGGCCATGGCTTTGCCAGTAGACATGAGTATCAGCATCCACACTaGAAACCGGACCCACGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LQGGTQISSGHGFASRHEYQHPH*KPDPRA Trigger: GGCACGTGGGTCCGGTTTGCAGTGTGGATGCTGATA...CTCATGTCTACTGGCAAAGCCATGGCCACTGCTGATCTGTGTACCTCCCTGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS-3UTR CCA 90 bp | TGCCTTAGACAGGGAGGTTTTACCCAGAAAGCAAGAGACAGTTCAGCAGGAGGAAGGCTGAGCCCGTCTTaGGGACACGGGCACCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: CLRQGGFTQKARDSSAGGRLSPS*GHGHQT Trigger: AGTTTGGTGCCCGTGTCCCCAAGACGGGCTCAGCCT...TCCTCCTGCTGAACTGTCTCTTGCTTTCTGGGTAAAACCTCCCTGTCTAAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS-3UTR CCA 90 bp | TTCCATTGCAGGGAGGTACACAGATCAGCAGTGGCCATGGCTTTGCCAGTAGACCGCCTGAGGTCACAGTaGCGATTACGGGTGTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FHCREVHRSAVAMALPVDRLRSQ*RLRVFW Trigger: CCAAAACACCCGTAATCGCCACTGTGACCTCAGGCG...GTCTACTGGCAAAGCCATGGCCACTGCTGATCTGTGTACCTCCCTGCAATGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR CAA 72 bp | TCACGTCAGTGGCCAGAAAGGCGTCACCACCCCACATaGAGTGCCACCTGTCTGAAGAACTTTAGAAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: SRQWPERRHHPT*SATCLKNFRRP Trigger: GGGTCTTCTAAAGTTCTTCAGACAGGTGGCACTCAATGTGGGGTGGTGACGCCTTTCTGGCCACTGACGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR CAA 72 bp | GCAGACACTTCTGACCATCAAGCCTCAGGCAGGTGCTaGGTATGTGGTTCCCAAGTCAAGTCACCAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ADTSDHQASGRC*VCGSQVKSPAE Trigger: CTCTGCTGGTGACTTGACTTGGGAACCACATACCAAGCACCTGCCTGAGGCTTGATGGTCAGAAGTGTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS-3UTR TCA 90 bp | TTGCAGGGAGGTACACAGATCAGCAGTGGCCATGGCTTTGCCAGTAGACATGAGCAATCAAGAAGGAGATaGCGATGGCAGGGCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LQGGTQISSGHGFASRHEQSRRR*RWQGQH Trigger: ATGCTGGCCCTGCCATCGTCATCTCCTTCTTGATTG...CTCATGTCTACTGGCAAAGCCATGGCCACTGCTGATCTGTGTACCTCCCTGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS-3UTR TCA 90 bp | CCCATCCTACCACCCCAGCCAGAAAGCAGTAAGATGTGGGCCTGTTCCTCCTCTGTGATTCACTGGCACTaGCCAGCTCATTCTGATCTA | + |
|
Preference number: 4 (lower is better) Translates to: PILPPQPESSKMWACSSSVIHWH*PAHSDL Trigger: TAGATCAGAATGAGCTGGTCAGTGCCAGTGAATCAC...AGAGGAGGAACAGGCCCACATCTTACTGCTTTCTGGCTGGGGTGGTAGGATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS-3UTR CCA 90 bp | TTCCATTGCAGGGAGGTACACAGATCAGCAGTGGCCATGGCTTTGCCAGTAGACGTGAGAACTCTCCGATaGGCTTGCCTATCAGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: FHCREVHRSAVAMALPVDVRTLR*ACLSAR Trigger: ACGAGCTGATAGGCAAGCCCATCGGAGAGTTCTCAC...GTCTACTGGCAAAGCCATGGCCACTGCTGATCTGTGTACCTCCCTGCAATGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS-3UTR TCA 90 bp | GGGGAGGACTCCGCAGTACTCCTTAGATGTAAAAGGCCACACAGATCACGTCAGCATGCAGAGGAGGACTaGCCCTGTCATTACAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GEDSAVLLRCKRPHRSRQHAEED*PCHYKD Trigger: GTCTTTGTAATGACAGGGTCAGTCCTCCTCTGCATG...CTGACGTGATCTGTGTGGCCTTTTACATCTAAGGAGTACTGCGGAGTCCTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS-3UTR GCA 90 bp | CCAGCACTCTCAAGCAGTTTCTATCTACAAAGAGTAAATGAAGAGGTGTCAGCCCACCAGCGCCCAAGGTaGTGCCCACCCCAAGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: PALSSSFYLQRVNEEVSAHQRPR*CPPQEL Trigger: TAGCTCTTGGGGTGGGCAGCACCTTGGGCGCTGGTG...GGCTGACACCTCTTCATTTACTCTTTGTAGATAGAAACTGCTTGAGAGTGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS-3UTR GCA 90 bp | GCCTTAGACAGGGAGGTTTTACCCAGAAAGCAAGAGACAGTTCAGCAGGAGGAGATGAGAGCTTGGTCTTaGTCTCAGGCTGTCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ALDREVLPRKQETVQQEEMRAWS*SQAVSR Trigger: TCTGGAGACAGCCTGAGAGCAAGACCAAGCTCTCAT...CTCCTCCTGCTGAACTGTCTCTTGCTTTCTGGGTAAAACCTCCCTGTCTAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS-3UTR CCA 90 bp | CATCAGTCTACCTACTCAGCCTGTTTCCACCAGACTTGGGTCAAAAGCCAGACAGCTCCTCGGTGGTTCTaGCCATCTGGTATACCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: HQSTYSACFHQTWVKSQTAPRWF*PSGIPD Trigger: ATCTGGTATACCAGATGGCCAGAACCACCGAGGAGC...TGTCTGGCTTTTGACCCAAGTCTGGTGGAAACAGGCTGAGTAGGTAGACTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS-3UTR TCA 90 bp | GAGAAACCACAACACAAGTATTCAGGTTTGCAAATAAACCAGCCCTCGTTAGTAGCTGTAGAGGTAGGCTaGGCCCGTCTTGGGGACACG | + |
|
Preference number: 4 (lower is better) Translates to: EKPQHKYSGLQINQPSLVAVEVG*ARLGDT Trigger: CGTGTCCCCAAGACGGGCTCAGCCTACCTCTACAGC...TACTAACGAGGGCTGGTTTATTTGCAAACCTGAATACTTGTGTTGTGGTTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS-3UTR TCA 90 bp | CCTGGAGAAACCACAACACAAGTATTCAGGTTTGCAAATAAACCAGCCCTCGTTAGCAGCAATGGCGCCTaGGGTCACAGTGGCGATTAC | + |
|
Preference number: 4 (lower is better) Translates to: PGETTTQVFRFANKPALVSSNGA*GHSGDY Trigger: GTAATCGCCACTGTGACCTCAGGCGCCATTGCTGCT...AACGAGGGCTGGTTTATTTGCAAACCTGAATACTTGTGTTGTGGTTTCTCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS-3UTR CCA 90 bp | CATCAGTCTACCTACTCAGCCTGTTTCCACCAGACTTGGGTCAAAAGCCAGACAGATCTAGCTCCTCGGTaGTTCTGGCCATCTGGTATA | + |
|
Preference number: 4 (lower is better) Translates to: HQSTYSACFHQTWVKSQTDLAPR*FWPSGI Trigger: TATACCAGATGGCCAGAACCACCGAGGAGCTAGATC...TGTCTGGCTTTTGACCCAAGTCTGGTGGAAACAGGCTGAGTAGGTAGACTGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS-3UTR CCA 90 bp | CATCAGTCTACCTACTCAGCCTGTTTCCACCAGACTTGGGTCAAAAGCCAGACAAGGGCTCCACGTTCTTaGGTGAGAGGATGGATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HQSTYSACFHQTWVKSQTRAPRS*VRGWIS Trigger: TGAAATCCATCCTCTCACCCAAGAACGTGGAGCCCT...TGTCTGGCTTTTGACCCAAGTCTGGTGGAAACAGGCTGAGTAGGTAGACTGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS-3UTR TCA 90 bp | TGCCTTAGACAGGGAGGTTTTACCCAGAAAGCAAGAGACAGTTCAGCAGGAGGAGGTCCAGCTGCATCATaGGATAGATGTTCACGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CLRQGGFTQKARDSSAGGGPAAS*DRCSRR Trigger: TCTTCGTGAACATCTATCTCATGATGCAGCTGGACC...TCCTCCTGCTGAACTGTCTCTTGCTTTCTGGGTAAAACCTCCCTGTCTAAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR CAA 72 bp | CCATCAGTCTACCTACTCAGCCTGTTTCCACCAGACTaGGGTCAAAAGCCAGACAGAAAAGAAAGCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSVYLLSLFPPD*GQKPDRKESLA Trigger: AGCCAAGCTTTCTTTTCTGTCTGGCTTTTGACCCAAGTCTGGTGGAAACAGGCTGAGTAGGTAGACTGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS-3UTR CCA 90 bp | AGAGACAGGAAGAGCACAGGCTCCTGGAAAAATGGGTCTTTTCAATGTGAATATTGGAGCCTAGGAGACTaGTGGAAAGTGCGCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RDRKSTGSWKNGSFQCEYWSLGD*WKVRRE Trigger: CTCTCTGCGCACTTTCCACCAGTCTCCTAGGCTCCA...ATATTCACATTGAAAAGACCCATTTTTCCAGGAGCCTGTGCTCTTCCTGTCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS-3UTR TCA 90 bp | CCTGGAGAAACCACAACACAAGTATTCAGGTTTGCAAATAAACCAGCCCTCGTTCTCCACGTTCTTGGGTaGGAGGATGGATTTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PGETTTQVFRFANKPALVLHVLG*EDGFQR Trigger: TCTCTGAAATCCATCCTCTCACCCAAGAACGTGGAG...AACGAGGGCTGGTTTATTTGCAAACCTGAATACTTGTGTTGTGGTTTCTCCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| CDS-3UTR CCA 90 bp | AGAGACAGGAAGAGCACAGGCTCCTGGAAAAATGGGTCTTTTCAATGTGAATATTTAGCCCTGAGAATTTaGAGGGCTCCACGTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RDRKSTGSWKNGSFQCEYLALRI*RAPRSW Trigger: CCAAGAACGTGGAGCCCTCCAAATTCTCAGGGCTAA...ATATTCACATTGAAAAGACCCATTTTTCCAGGAGCCTGTGCTCTTCCTGTCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR CAA 72 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTTaGGGTTTGGGGCTTGTGTTTTCCTTTCAGAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCC*GLGLVFSFQKE Trigger: TTCCTTCTGAAAGGAAAACACAAGCCCCAAACCCAAACAACACACACACACACACACACACACACACACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR CAA 72 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGTTTGGGTTTGGGGCTTGTGTTTTCCTTTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCV*FGFGACVFLSE Trigger: TTCTGAAAGGAAAACACAAGCCCCAAACCCAAACAACACACACACACACACACACACACACACACACACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| CDS-3UTR TCA 90 bp | CCAGCACTCTCAAGCAGTTTCTATCTACAAAGAGTAAATGAAGAGGTGTCAGCCAAAGGGTACCTTAAATaGGAGCTTGGTCTTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PALSSSFYLQRVNEEVSAKGYLK*ELGLAL Trigger: GAGAGCAAGACCAAGCTCTCATTTAAGGTACCCTTT...GGCTGACACCTCTTCATTTACTCTTTGTAGATAGAAACTGCTTGAGAGTGCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR CAA 72 bp | CTTGAACCGCAAGCTGATATGGCAGTCGGTAATGATTaGGCTATCTTCCAAGGTAACATTAAGCCCCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LEPQADMAVGND*AIFQGNIKPQV Trigger: AACTTGGGGCTTAATGTTACCTTGGAAGATAGCCAAATCATTACCGACTGCCATATCAGCTTGCGGTTCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| 3UTR CAA 72 bp | GAAACATATAGAACAGATGTATATATAGACCGTTGCTaGCGGTCCTCAGGAGGGATGGTGACAGATCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: ETYRTDVYIDRC*RSSGGMVTDQT Trigger: GGTTTGATCTGTCACCATCCCTCCTGAGGACCGCAAGCAACGGTCTATATATACATCTGTTCTATATGTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| CDS-3UTR TCA 90 bp | GAGAAACCACAACACAAGTATTCAGGTTTGCAAATAAACCAGCCCTCGTTAGTACGCTTGAAGTACCGATaGTGTAGGAGAGAATCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: EKPQHKYSGLQINQPSLVRLKYR*CRRESG Trigger: ACCTGATTCTCTCCTACATCATCGGTACTTCAAGCG...TACTAACGAGGGCTGGTTTATTTGCAAACCTGAATACTTGTGTTGTGGTTTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| CDS-3UTR TCA 90 bp | CCTGGAGAAACCACAACACAAGTATTCAGGTTTGCAAATAAACCAGCCCTCGTTAACCGAAATAGATGGTaGAACCTATCAGCATCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PGETTTQVFRFANKPALVNRNRW*NLSAST Trigger: TGTGGATGCTGATAGGTTTCACCATCTATTTCGGTT...AACGAGGGCTGGTTTATTTGCAAACCTGAATACTTGTGTTGTGGTTTCTCCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| CDS-3UTR CCA 90 bp | GAGAAACCACAACACAAGTATTCAGGTTTGCAAATAAACCAGCCCTCGTTAGTAGTGGTTCTGGCCATCTaGTATACCAGATTAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: EKPQHKYSGLQINQPSLVVVLAI*YTRLGC Trigger: ACAACCTAATCTGGTATACCAGATGGCCAGAACCAC...TACTAACGAGGGCTGGTTTATTTGCAAACCTGAATACTTGTGTTGTGGTTTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| 3UTR CAA 72 bp | TCACCAGCAGAGGGGATATCAGATGACAGGCAGAATTaGCATACTGTAAAACCAAACTGTGAACAACTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SPAEGISDDRQN*HTVKPNCEQLK Trigger: TTTCAGTTGTTCACAGTTTGGTTTTACAGTATGCAAATTCTGCCTGTCATCTGATATCCCCTCTGCTGGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS TCA 90 bp | ACAGGCCGGCCAGCACGGAGGCGAGAGCAGCAATCAAGAAGGAGATaGCGATGGCAGGGCCAGCATTTTCACGGGCCACGGCACCGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: TGRPARRREQQSRRR*RWQGQHFHGPRHRL Trigger: TAGCCGGTGCCGTGGCCCGTGAAAATGCTGGCCCTGCCATCGTCATCTCCTTCTTGATTGCTGCTCTCGCCTCCGTGCTGGCCGGCCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048116.15 ENSMUST00000138257.8 ENSMUST00000138596.2 |
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| CDS CCA 90 bp | CAGAGAGAGCCAATGGCCACTGCGTACTTAGCTTCTTCCCAGCCCTaGTGCTTGAAGGCACCAGGCAGCGGGCTGTCGATGTCCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QREPMATAYLASSQP*CLKAPGSGLSMSRQ Trigger: CTGCCTGGACATCGACAGCCCGCTGCCTGGTGCCTTCAAGCACCAGGGCTGGGAAGAAGCTAAGTACGCAGTGGCCATTGGCTCTCTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048116.15 ENSMUST00000138257.8 |
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| CDS-3UTR CAA 90 bp | CAGATGCTTCTGTGCAGACCCGGGACCCCATCCTACCACCCCAGCCAGAAAGCAGCCTTCTGGGGGTTCTaGACTTCTTCCCCTGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QMLLCRPGTPSYHPSQKAAFWGF*TSSPVV Trigger: CACCACAGGGGAAGAAGTCAAGAACCCCCAGAAGGC...TGCTTTCTGGCTGGGGTGGTAGGATGGGGTCCCGGGTCTGCACAGAAGCATCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS TCA 90 bp | GGTTTGGGCCAGCACCCCAGGAGCATTCAGGGCCATGTGCTGACGTaGGAACTCTCCGATGGGCTTGCCTATCAGCTCGTCAAAAGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: GLGQHPRSIQGHVLT*ELSDGLAYQLVKSR Trigger: GCGACTTTTGACGAGCTGATAGGCAAGCCCATCGGAGAGTTCTCACGTCAGCACATGGCCCTGAATGCTCCTGGGGTGCTGGCCCAAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048116.15 ENSMUST00000138257.8 |
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| CDS TCA 90 bp | TCCGGGGTTTGGGCCAGCACCCCAGGAGCATTCAGGGCCATGTGCTaGCGTGAGAACTCTCCGATGGGCTTGCCTATCAGCTCGTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SGVWASTPGAFRAMC*RENSPMGLPISSSK Trigger: TTTTGACGAGCTGATAGGCAAGCCCATCGGAGAGTTCTCACGTCAGCACATGGCCCTGAATGCTCCTGGGGTGCTGGCCCAAACCCCGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048116.15 ENSMUST00000138257.8 |
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| CDS GCA 90 bp | GAGCATTCAGGGCCATGTGCTGACGTGAGAACTCTCCGATGGGCTTaGCTATCAGCTCGTCAAAAGTCGCACTCCAGGCTCTTGCCACGC | + |
|
Preference number: 5 (lower is better) Translates to: EHSGPCADVRTLRWA*LSARQKSHSRLLPR Trigger: GCGTGGCAAGAGCCTGGAGTGCGACTTTTGACGAGCTGATAGGCAAGCCCATCGGAGAGTTCTCACGTCAGCACATGGCCCTGAATGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048116.15 ENSMUST00000138257.8 |
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| CDS CCA 90 bp | CCCCAGGAGCATTCAGGGCCATGTGCTGACGTGAGAACTCTCCGATaGGCTTGCCTATCAGCTCGTCAAAAGTCGCACTCCAGGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PQEHSGPCADVRTLR*ACLSARQKSHSRLL Trigger: CAAGAGCCTGGAGTGCGACTTTTGACGAGCTGATAGGCAAGCCCATCGGAGAGTTCTCACGTCAGCACATGGCCCTGAATGCTCCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048116.15 ENSMUST00000138257.8 |
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| CDS-3UTR CAA 90 bp | CCCGGGACCCCATCCTACCACCCCAGCCAGAAAGCAGTAAGATGTGGGCCTGTTAATGAGAGCTTGGTCTaGCTCTCAGGCTGTCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PGTPSYHPSQKAVRCGPVNESLV*LSGCLQ Trigger: CTGGAGACAGCCTGAGAGCAAGACCAAGCTCTCATT...AACAGGCCCACATCTTACTGCTTTCTGGCTGGGGTGGTAGGATGGGGTCCCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS TCA 90 bp | AGGCTGTCTCCAGATGATGCCTGTCACCAGCATGCAGAGGAGGACTaGCCCTGTCATTACAAAGACTGCCCACAGTGTCCCTTCGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RLSPDDACHQHAEED*PCHYKDCPQCPFGQ Trigger: CTGGCCGAAGGGACACTGTGGGCAGTCTTTGTAATGACAGGGTCAGTCCTCCTCTGCATGCTGGTGACAGGCATCATCTGGAGACAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS TCA 90 bp | TCCACACTGCAAACCGGACCCACGTGCCCTGGTCCAGCTGCATCATaGGATAGATGTTCACGAAGATGCTCAAGACAGGAAGTACGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: STLQTGPTCPGPAAS*DRCSRRCSRQEVRG Trigger: TCCCCGTACTTCCTGTCTTGAGCATCTTCGTGAACATCTATCTCATGATGCAGCTGGACCAGGGCACGTGGGTCCGGTTTGCAGTGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS TCA 90 bp | GGGACGCTTCCTCACTGTGCCAGATCCCATAACCGAAATAGATGGTaGAACCTATCAGCATCCACACTGCAAACCGGACCCACGTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GTLPHCARSHNRNRW*NLSASTLQTGPTCP Trigger: AGGGCACGTGGGTCCGGTTTGCAGTGTGGATGCTGATAGGTTTCACCATCTATTTCGGTTATGGGATCTGGCACAGTGAGGAAGCGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS-3UTR CAA 90 bp | CATCAGTCTACCTACTCAGCCTGTTTCCACCAGACTTGGGTCAAAAGCCAGACAAAATATGTCCGGGGTTaGGGCCAGCACCCCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: HQSTYSACFHQTWVKSQTKYVRG*GQHPRS Trigger: GCTCCTGGGGTGCTGGCCCAAACCCCGGACATATTT...TGTCTGGCTTTTGACCCAAGTCTGGTGGAAACAGGCTGAGTAGGTAGACTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS-3UTR CAA 90 bp | CGGCCACTGGTAATCCCAGCCCTATGCATGAGAGCATCAGGCAGTAGACAGGTGACCTTAAATGAGAGCTaGGTCTTGCTCTCAGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RPLVIPALCMRASGSRQVTLNES*VLLSGC Trigger: ACAGCCTGAGAGCAAGACCAAGCTCTCATTTAAGGT...CACCTGTCTACTGCCTGATGCTCTCATGCATAGGGCTGGGATTACCAGTGGCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS-3UTR CAA 90 bp | TGCCTTAGACAGGGAGGTTTTACCCAGAAAGCAAGAGACAGTTCAGCAGGAGGAGAGGGCTCCACGTTCTaGGGTGAGAGGATGGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: CLRQGGFTQKARDSSAGGEGSTF*GERMDF Trigger: GAAATCCATCCTCTCACCCAAGAACGTGGAGCCCTC...TCCTCCTGCTGAACTGTCTCTTGCTTTCTGGGTAAAACCTCCCTGTCTAAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS-3UTR CAA 90 bp | CCAGCACTCTCAAGCAGTTTCTATCTACAAAGAGTAAATGAAGAGGTGTCAGCCTGCTGTCAGGAGTCTTaGCCTGGCCAGCAGCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PALSSSFYLQRVNEEVSACCQES*PGQQPG Trigger: CCCTGGCTGCTGGCCAGGCAAAGACTCCTGACAGCA...GGCTGACACCTCTTCATTTACTCTTTGTAGATAGAAACTGCTTGAGAGTGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS-3UTR CAA 90 bp | GCCTTAGACAGGGAGGTTTTACCCAGAAAGCAAGAGACAGTTCAGCAGGAGGAGTTGCACTGGTCCAAGTaGCTGTCAGGAGTCTTTGCC | + |
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Preference number: 5 (lower is better) Translates to: ALDREVLPRKQETVQQEELHWSK*LSGVFA Trigger: GGCAAAGACTCCTGACAGCAACTTGGACCAGTGCAA...CTCCTCCTGCTGAACTGTCTCTTGCTTTCTGGGTAAAACCTCCCTGTCTAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS TCA 90 bp | ACTTCTCGGCTACCGGTAAAAAGCCTGTCTGTGATTCACTGGCACTaGCCAGCTCATTCTGATCTACTCGATCTAGCTCCTCGGTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: TSRLPVKSLSVIHWH*PAHSDLLDLAPRWF Trigger: GAACCACCGAGGAGCTAGATCGAGTAGATCAGAATGAGCTGGTCAGTGCCAGTGAATCACAGACAGGCTTTTTACCGGTAGCCGAGAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048116.15 ENSMUST00000138257.8 |
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| CDS GCA 90 bp | GATCCCATAACCGAAATAGATGGTGAAACCTATCAGCATCCACACTaGAAACCGGACCCACGTGCCCTGGTCCAGCTGCATCATGAGATA | + |
|
Preference number: 5 (lower is better) Translates to: DPITEIDGETYQHPH*KPDPRALVQLHHEI Trigger: TATCTCATGATGCAGCTGGACCAGGGCACGTGGGTCCGGTTTGCAGTGTGGATGCTGATAGGTTTCACCATCTATTTCGGTTATGGGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS-3UTR CAA 90 bp | ACTCGGGAGCCTGAGGCAGAGGCCACACTGGGCAACGATAATCCTATTCCAGGCCACAAGACCAGGACATaGATACAGGTGAAAATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TREPEAEATLGNDNPIPGHKTRT*IQVKIL Trigger: CAAAATTTTCACCTGTATCAATGTCCTGGTCTTGTG...GCCTGGAATAGGATTATCGTTGCCCAGTGTGGCCTCTGCCTCAGGCTCCCGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS TCA 90 bp | GGTAAAAAGCCTGTCTGTGATTCACTGGCACTGACCAGCTCATTCTaGTCTACTCGATCTAGCTCCTCGGTGGTTCTGGCCATCTGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: GKKPVCDSLALTSSF*STRSSSSVVLAIWY Trigger: ATACCAGATGGCCAGAACCACCGAGGAGCTAGATCGAGTAGATCAGAATGAGCTGGTCAGTGCCAGTGAATCACAGACAGGCTTTTTACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048116.15 ENSMUST00000138257.8 |
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| CDS TCA 90 bp | GAAGATGCTCAAGACAGGAAGTACGGGGACAAAGGGTACCTTAAATaGGAGCTTGGTCTTGCTCTCAGGCTGTCTCCAGATGATGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: EDAQDRKYGDKGYLK*ELGLALRLSPDDAC Trigger: ACAGGCATCATCTGGAGACAGCCTGAGAGCAAGACCAAGCTCTCATTTAAGGTACCCTTTGTCCCCGTACTTCCTGTCTTGAGCATCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS-3UTR CAA 90 bp | TGCCTTAGACAGGGAGGTTTTACCCAGAAAGCAAGAGACAGTTCAGCAGGAGGAAACTCTCCGATGGGCTaGCCTATCAGCTCGTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: CLRQGGFTQKARDSSAGGNSPMG*PISSSK Trigger: TTTTGACGAGCTGATAGGCAAGCCCATCGGAGAGTT...TCCTCCTGCTGAACTGTCTCTTGCTTTCTGGGTAAAACCTCCCTGTCTAAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS-3UTR CAA 90 bp | TTTGATTTTACAACACATAAGTATGGGAGGGGTCTTGCCAGTGTACAATGTATTTCCCAGCCCTGGTGCTaGAAGGCACCAGGCAGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: FDFTTHKYGRGLASVQCISQPWC*KAPGSG Trigger: CCCGCTGCCTGGTGCCTTCAAGCACCAGGGCTGGGA...AATACATTGTACACTGGCAAGACCCCTCCCATACTTATGTGTTGTAAAATCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS GCA 90 bp | ACGTTTGTGTCGTTGTTGTTACAGGAGAAATTTTTCTCCGTGAGCTaGCAGTTTTTAATGGAGCCTTTCACGAACCCGGACACCACGATG | + |
|
Preference number: 5 (lower is better) Translates to: TFVSLLLQEKFFSVS*QFLMEPFTNPDTTM Trigger: CATCGTGGTGTCCGGGTTCGTGAAAGGCTCCATTAAAAACTGGCAGCTCACGGAGAAAAATTTCTCCTGTAACAACAACGACACAAACGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000048116.15 ENSMUST00000138257.8 ENSMUST00000202457.4 |
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| CDS CCA 90 bp | AAATGTTCACAATTAGCCCTGAGAATTTGGAGGGCTCCACGTTCTTaGGTGAGAGGATGGATTTCAGAGAAAACTTCTCGGCTACCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: KCSQLALRIWRAPRS*VRGWISEKTSRLPV Trigger: TACCGGTAGCCGAGAAGTTTTCTCTGAAATCCATCCTCTCACCCAAGAACGTGGAGCCCTCCAAATTCTCAGGGCTAATTGTGAACATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048116.15 ENSMUST00000138257.8 |
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| CDS-3UTR CAA 90 bp | TCAGAAGGAACTGGGGGCATAATAAAAAGCACATTAGAGGCTCGCTCCAGGCATATACAGGTGAAAATTTaGTTGACCATGGCTGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: SEGTGGIIKSTLEARSRHIQVKI*LTMADS Trigger: GGAGTCAGCCATGGTCAACAAAATTTTCACCTGTAT...ATGCCTGGAGCGAGCCTCTAATGTGCTTTTTATTATGCCCCCAGTTCCTTCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS-3UTR CAA 90 bp | ATTCACAGCAAGCAGCAGGGGGAGGACTCCGCAGTACTCCTTAGATGTAAAAGGTTCACGTTTGTGTCGTaGTTGTTACAGGAGAAATTT | + |
|
Preference number: 5 (lower is better) Translates to: IHSKQQGEDSAVLLRCKRFTFVS*LLQEKF Trigger: AAATTTCTCCTGTAACAACAACGACACAAACGTGAA...CCTTTTACATCTAAGGAGTACTGCGGAGTCCTCCCCCTGCTGCTTGCTGTGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS TCA 72 bp | TGGGCCAGCACCCCAGGAGCATTCAGGGCCATGTGCTaGCGTGAGAACTCTCCGATGGGCTTGCCTATCAGC | + |
|
Preference number: 6 (lower is better) Translates to: WASTPGAFRAMC*RENSPMGLPIS Trigger: GCTGATAGGCAAGCCCATCGGAGAGTTCTCACGTCAGCACATGGCCCTGAATGCTCCTGGGGTGCTGGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048116.15 ENSMUST00000138257.8 |
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| CDS CCA 72 bp | CCAATGGCCACTGCGTACTTAGCTTCTTCCCAGCCCTaGTGCTTGAAGGCACCAGGCAGCGGGCTGTCGATG | + |
|
Preference number: 6 (lower is better) Translates to: PMATAYLASSQP*CLKAPGSGLSM Trigger: CATCGACAGCCCGCTGCCTGGTGCCTTCAAGCACCAGGGCTGGGAAGAAGCTAAGTACGCAGTGGCCATTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048116.15 ENSMUST00000138257.8 |
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| CDS TCA 72 bp | CAGCACCCCAGGAGCATTCAGGGCCATGTGCTGACGTaGGAACTCTCCGATGGGCTTGCCTATCAGCTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: QHPRSIQGHVLT*ELSDGLAYQLV Trigger: GACGAGCTGATAGGCAAGCCCATCGGAGAGTTCTCACGTCAGCACATGGCCCTGAATGCTCCTGGGGTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048116.15 ENSMUST00000138257.8 |
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| CDS CCA 72 bp | TTGCACTGGTCCAAGTTGCTGTCAGGAGTCTTTGCCTaGCCAGCAGCCAGGGACGCTTCCTCACTGTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LHWSKLLSGVFA*PAARDASSLCQ Trigger: CTGGCACAGTGAGGAAGCGTCCCTGGCTGCTGGCCAGGCAAAGACTCCTGACAGCAACTTGGACCAGTGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS GCA 72 bp | GGGCCATGTGCTGACGTGAGAACTCTCCGATGGGCTTaGCTATCAGCTCGTCAAAAGTCGCACTCCAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GPCADVRTLRWA*LSARQKSHSRL Trigger: GAGCCTGGAGTGCGACTTTTGACGAGCTGATAGGCAAGCCCATCGGAGAGTTCTCACGTCAGCACATGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048116.15 ENSMUST00000138257.8 |
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| CDS GCA 72 bp | TCATTTGCACTGGTCCAAGTTGCTGTCAGGAGTCTTTaGCTGGCCAGCAGCCAGGGACGCTTCCTCACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SFALVQVAVRSL*LASSQGRFLTV Trigger: CACAGTGAGGAAGCGTCCCTGGCTGCTGGCCAGGCAAAGACTCCTGACAGCAACTTGGACCAGTGCAAATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS TCA 72 bp | CCAGATGATGCCTGTCACCAGCATGCAGAGGAGGACTaGCCCTGTCATTACAAAGACTGCCCACAGTGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PDDACHQHAEED*PCHYKDCPQCP Trigger: GGGACACTGTGGGCAGTCTTTGTAATGACAGGGTCAGTCCTCCTCTGCATGCTGGTGACAGGCATCATCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048116.15 ENSMUST00000138257.8 |
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| CDS TCA 72 bp | ATGAGAGCTTGGTCTTGCTCTCAGGCTGTCTCCAGATaGTGCCTGTCACCAGCATGCAGAGGAGGACTGACC | + |
|
Preference number: 6 (lower is better) Translates to: MRAWSCSQAVSR*CLSPACRGGLT Trigger: GGTCAGTCCTCCTCTGCATGCTGGTGACAGGCATCATCTGGAGACAGCCTGAGAGCAAGACCAAGCTCTCAT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS CCA 72 bp | CATTCAGGGCCATGTGCTGACGTGAGAACTCTCCGATaGGCTTGCCTATCAGCTCGTCAAAAGTCGCACTCC | + |
|
Preference number: 6 (lower is better) Translates to: HSGPCADVRTLR*ACLSARQKSHS Trigger: GGAGTGCGACTTTTGACGAGCTGATAGGCAAGCCCATCGGAGAGTTCTCACGTCAGCACATGGCCCTGAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048116.15 ENSMUST00000138257.8 |
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| CDS TCA 72 bp | CCTGTCTGTGATTCACTGGCACTGACCAGCTCATTCTaGTCTACTCGATCTAGCTCCTCGGTGGTTCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PVCDSLALTSSF*STRSSSSVVLA Trigger: GGCCAGAACCACCGAGGAGCTAGATCGAGTAGATCAGAATGAGCTGGTCAGTGCCAGTGAATCACAGACAGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048116.15 ENSMUST00000138257.8 |
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| CDS CCA 72 bp | CCTTCAGTTCAAAGAGGAAGGCCATCACAGCAGCAATaGCGCCTGAGGTCACAGTGGCGATTACGGGTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: PSVQRGRPSQQQ*RLRSQWRLRVF Trigger: AAACACCCGTAATCGCCACTGTGACCTCAGGCGCCATTGCTGCTGTGATGGCCTTCCTCTTTGAACTGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048116.15 ENSMUST00000138257.8 |
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| CDS TCA 72 bp | CAAACCGGACCCACGTGCCCTGGTCCAGCTGCATCATaGGATAGATGTTCACGAAGATGCTCAAGACAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: QTGPTCPGPAAS*DRCSRRCSRQE Trigger: TTCCTGTCTTGAGCATCTTCGTGAACATCTATCTCATGATGCAGCTGGACCAGGGCACGTGGGTCCGGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS CAA 90 bp | ACAGGAAGTACGGGGACAAAGGGTACCTTAAATGAGAGCTTGGTCTaGCTCTCAGGCTGTCTCCAGATGATGCCTGTCACCAGCATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: TGSTGTKGTLNESLV*LSGCLQMMPVTSMQ Trigger: CTGCATGCTGGTGACAGGCATCATCTGGAGACAGCCTGAGAGCAAGACCAAGCTCTCATTTAAGGTACCCTTTGTCCCCGTACTTCCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS CAA 90 bp | CTCAAGACAGGAAGTACGGGGACAAAGGGTACCTTAAATGAGAGCTaGGTCTTGCTCTCAGGCTGTCTCCAGATGATGCCTGTCACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LKTGSTGTKGTLNES*VLLSGCLQMMPVTS Trigger: GCTGGTGACAGGCATCATCTGGAGACAGCCTGAGAGCAAGACCAAGCTCTCATTTAAGGTACCCTTTGTCCCCGTACTTCCTGTCTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS TCA 72 bp | CCTCACTGTGCCAGATCCCATAACCGAAATAGATGGTaGAACCTATCAGCATCCACACTGCAAACCGGACCC | + |
|
Preference number: 6 (lower is better) Translates to: PHCARSHNRNRW*NLSASTLQTGP Trigger: GGGTCCGGTTTGCAGTGTGGATGCTGATAGGTTTCACCATCTATTTCGGTTATGGGATCTGGCACAGTGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS CAA 72 bp | GGAAGTACGGGGACAAAGGGTACCTTAAATGAGAGCTaGGTCTTGCTCTCAGGCTGTCTCCAGATGATGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GSTGTKGTLNES*VLLSGCLQMMP Trigger: AGGCATCATCTGGAGACAGCCTGAGAGCAAGACCAAGCTCTCATTTAAGGTACCCTTTGTCCCCGTACTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
||
| CDS TCA 72 bp | CAAGACAGGAAGTACGGGGACAAAGGGTACCTTAAATaGGAGCTTGGTCTTGCTCTCAGGCTGTCTCCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: QDRKYGDKGYLK*ELGLALRLSPD Trigger: ATCTGGAGACAGCCTGAGAGCAAGACCAAGCTCTCATTTAAGGTACCCTTTGTCCCCGTACTTCCTGTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048116.15 |
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| CDS CCA 72 bp | ATGATAATTATAATCACAGCAAATATGTCCGGGGTTTaGGCCAGCACCCCAGGAGCATTCAGGGCCATGTGC | + |
|
Preference number: 6 (lower is better) Translates to: MIIIITANMSGV*ASTPGAFRAMC Trigger: GCACATGGCCCTGAATGCTCCTGGGGTGCTGGCCCAAACCCCGGACATATTTGCTGTGATTATAATTATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048116.15 ENSMUST00000138257.8 |
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| CDS CAA 72 bp | GATGATAATTATAATCACAGCAAATATGTCCGGGGTTaGGGCCAGCACCCCAGGAGCATTCAGGGCCATGTG | + |
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Preference number: 6 (lower is better) Translates to: DDNYNHSKYVRG*GQHPRSIQGHV Trigger: CACATGGCCCTGAATGCTCCTGGGGTGCTGGCCCAAACCCCGGACATATTTGCTGTGATTATAATTATCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048116.15 ENSMUST00000138257.8 |
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| CDS CAA 90 bp | CCTTTCACGAACCCGGACACCACGATGAAGCACAAGACCAGGACATaGATACAGGTGAAAATTTTGTTGACCATGGCTGACTCCTTCACG | + |
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Preference number: 6 (lower is better) Translates to: PFTNPDTTMKHKTRT*IQVKILLTMADSFT Trigger: CGTGAAGGAGTCAGCCATGGTCAACAAAATTTTCACCTGTATCAATGTCCTGGTCTTGTGCTTCATCGTGGTGTCCGGGTTCGTGAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048116.15 ENSMUST00000138257.8 ENSMUST00000202457.4 |
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| CDS TCA 72 bp | CTACCGGTAAAAAGCCTGTCTGTGATTCACTGGCACTaGCCAGCTCATTCTGATCTACTCGATCTAGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LPVKSLSVIHWH*PAHSDLLDLAP Trigger: AGGAGCTAGATCGAGTAGATCAGAATGAGCTGGTCAGTGCCAGTGAATCACAGACAGGCTTTTTACCGGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048116.15 ENSMUST00000138257.8 |
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| CDS CAA 90 bp | ACCACGATGAAGCACAAGACCAGGACATTGATACAGGTGAAAATTTaGTTGACCATGGCTGACTCCTTCACGCCAAGAGTTAACAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: TTMKHKTRTLIQVKI*LTMADSFTPRVNSP Trigger: AGGACTGTTAACTCTTGGCGTGAAGGAGTCAGCCATGGTCAACAAAATTTTCACCTGTATCAATGTCCTGGTCTTGTGCTTCATCGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048116.15 ENSMUST00000138257.8 ENSMUST00000202457.4 |
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| CDS GCA 72 bp | TCGTTGTTGTTACAGGAGAAATTTTTCTCCGTGAGCTaGCAGTTTTTAATGGAGCCTTTCACGAACCCGGAC | + |
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Preference number: 6 (lower is better) Translates to: SLLLQEKFFSVS*QFLMEPFTNPD Trigger: GTCCGGGTTCGTGAAAGGCTCCATTAAAAACTGGCAGCTCACGGAGAAAAATTTCTCCTGTAACAACAACGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000048116.15 ENSMUST00000138257.8 ENSMUST00000202457.4 |
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| CDS CAA 90 bp | ACGATGAAGCACAAGACCAGGACATTGATACAGGTGAAAATTTTGTaGACCATGGCTGACTCCTTCACGCCAAGAGTTAACAGTCCTGTT | + |
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Preference number: 6 (lower is better) Translates to: TMKHKTRTLIQVKIL*TMADSFTPRVNSPV Trigger: AACAGGACTGTTAACTCTTGGCGTGAAGGAGTCAGCCATGGTCAACAAAATTTTCACCTGTATCAATGTCCTGGTCTTGTGCTTCATCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048116.15 ENSMUST00000138257.8 ENSMUST00000202457.4 |
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| CDS CAA 90 bp | CCAAAGGGCATAAACCCTCCCTCACCGTATTTCACGTTTGTGTCGTaGTTGTTACAGGAGAAATTTTTCTCCGTGAGCTGCCAGTTTTTA | + |
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Preference number: 6 (lower is better) Translates to: PKGINPPSPYFTFVS*LLQEKFFSVSCQFL Trigger: TAAAAACTGGCAGCTCACGGAGAAAAATTTCTCCTGTAACAACAACGACACAAACGTGAAATACGGTGAGGGAGGGTTTATGCCCTTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000048116.15 ENSMUST00000138257.8 ENSMUST00000202457.4 |
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| CDS CAA 72 bp | CACAAGACCAGGACATTGATACAGGTGAAAATTTTGTaGACCATGGCTGACTCCTTCACGCCAAGAGTTAAC | + |
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Preference number: 6 (lower is better) Translates to: HKTRTLIQVKIL*TMADSFTPRVN Trigger: GTTAACTCTTGGCGTGAAGGAGTCAGCCATGGTCAACAAAATTTTCACCTGTATCAATGTCCTGGTCTTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048116.15 ENSMUST00000138257.8 ENSMUST00000202457.4 |
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| CDS CAA 72 bp | AAGCACAAGACCAGGACATTGATACAGGTGAAAATTTaGTTGACCATGGCTGACTCCTTCACGCCAAGAGTT | + |
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Preference number: 6 (lower is better) Translates to: KHKTRTLIQVKI*LTMADSFTPRV Trigger: AACTCTTGGCGTGAAGGAGTCAGCCATGGTCAACAAAATTTTCACCTGTATCAATGTCCTGGTCTTGTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048116.15 ENSMUST00000138257.8 ENSMUST00000202457.4 |
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| CDS CAA 72 bp | ATAAACCCTCCCTCACCGTATTTCACGTTTGTGTCGTaGTTGTTACAGGAGAAATTTTTCTCCGTGAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: INPPSPYFTFVS*LLQEKFFSVSC Trigger: GCAGCTCACGGAGAAAAATTTCTCCTGTAACAACAACGACACAAACGTGAAATACGGTGAGGGAGGGTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048116.15 ENSMUST00000138257.8 ENSMUST00000202457.4 |
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| CDS CAA 90 bp | AAGGGCATAAACCCTCCCTCACCGTATTTCACGTTTGTGTCGTTGTaGTTACAGGAGAAATTTTTCTCCGTGAGCTGCCAGTTTTTAATG | + |
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Preference number: 6 (lower is better) Translates to: KGINPPSPYFTFVSL*LQEKFFSVSCQFLM Trigger: CATTAAAAACTGGCAGCTCACGGAGAAAAATTTCTCCTGTAACAACAACGACACAAACGTGAAATACGGTGAGGGAGGGTTTATGCCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000048116.15 ENSMUST00000138257.8 ENSMUST00000202457.4 |
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| CDS CAA 72 bp | GTGGCGATTACGGGTGTTTTGGTCCTATTGTTGATTTaGGCCAAAAATTTAAACAGTAGTCCATCTTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: VAITGVLVLLLI*AKNLNSSPSSA Trigger: GGCTGAAGATGGACTACTGTTTAAATTTTTGGCCAAAATCAACAATAGGACCAAAACACCCGTAATCGCCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048116.15 ENSMUST00000138257.8 |
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