Pregenerated sensors for SLC6A9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028542Ensembl transcript IDs: ENSMUST00000030269.14, ENSMUST00000063857.11, ENSMUST00000123994.3, ENSMUST00000132043.9, ENSMUST00000149168.2, ENSMUST00000163288.2, ENSMUST00000169885.8, ENSMUST00000169990.8
Found 316 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGAAGACTGGGCCTCCGACCTGGTGGAGGGTGGGCAAGGGAATGTaGAACAGGGTCCCCTTCCCCAGGGCTCTGGGCTCAAGCTTCCTA | + |
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Preference number: 1 (lower is better) Translates to: GKTGPPTWWRVGKGM*NRVPFPRALGSSFL Trigger: TAGGAAGCTTGAGCCCAGAGCCCTGGGGAAGGGGACCCTGTTCCACATTCCCTTGCCCACCCTCCACCAGGTCGGAGGCCCAGTCTTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
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| 3UTR CCA 90 bp | GCCGTTACTGCCCACGATGGGAATCTGGGCCTTGTCCGGGTGCAGTaGCTGGACCTCAAACCCGTCTTCGGGAGAGGGGGTTGTAGTGGG | + |
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Preference number: 1 (lower is better) Translates to: AVTAHDGNLGLVRVQ*LDLKPVFGRGGCSG Trigger: CCCACTACAACCCCCTCTCCCGAAGACGGGTTTGAGGTCCAGCCACTGCACCCGGACAAGGCCCAGATTCCCATCGTGGGCAGTAACGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
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| 3UTR GCA 90 bp | CTGGAGCCGTTACTGCCCACGATGGGAATCTGGGCCTTGTCCGGGTaGAGTGGCTGGACCTCAAACCCGTCTTCGGGAGAGGGGGTTGTA | + |
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Preference number: 1 (lower is better) Translates to: LEPLLPTMGIWALSG*SGWTSNPSSGEGVV Trigger: TACAACCCCCTCTCCCGAAGACGGGTTTGAGGTCCAGCCACTGCACCCGGACAAGGCCCAGATTCCCATCGTGGGCAGTAACGGCTCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
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| 3UTR GCA 90 bp | ATTGCGCTCATATCCGGGAGTCCTGGAAGCGGCTGGAGCCGTTACTaGCCACGATGGGAATCTGGGCCTTGTCCGGGTGCAGTGGCTGGA | + |
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Preference number: 1 (lower is better) Translates to: IALISGSPGSGWSRY*PRWESGPCPGAVAG Trigger: TCCAGCCACTGCACCCGGACAAGGCCCAGATTCCCATCGTGGGCAGTAACGGCTCCAGCCGCTTCCAGGACTCCCGGATATGAGCGCAAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
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| 3UTR CCA 90 bp | TTACTGCCCACGATGGGAATCTGGGCCTTGTCCGGGTGCAGTGGCTaGACCTCAAACCCGTCTTCGGGAGAGGGGGTTGTAGTGGGAGCG | + |
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Preference number: 1 (lower is better) Translates to: LLPTMGIWALSGCSG*TSNPSSGEGVVVGA Trigger: CGCTCCCACTACAACCCCCTCTCCCGAAGACGGGTTTGAGGTCCAGCCACTGCACCCGGACAAGGCCCAGATTCCCATCGTGGGCAGTAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
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| 3UTR CCA 90 bp | CCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTaGGGTTTCTCCCCTTGCAACAATTGCGCTCATATCCGGGAGTCC | + |
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Preference number: 1 (lower is better) Translates to: PPVRLPVSVVGARVG*GFSPCNNCAHIRES Trigger: GGACTCCCGGATATGAGCGCAATTGTTGCAAGGGGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
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| 3UTR CCA 90 bp | GCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTaGGTGGGGTTTCTCCCCTTGCAACAATTGCGCTCATATCCGGGA | + |
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Preference number: 1 (lower is better) Translates to: ASTCPPPSLRGGSKG*VGFLPLQQLRSYPG Trigger: TCCCGGATATGAGCGCAATTGTTGCAAGGGGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
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| 3UTR TCA 90 bp | TGCTTTGGGCAGGCTGCTGGGTCGTGGGCCTTTGCTGGCTGGGCCTaGCAACCAGGGTTGGAACAAAGGATAGAGACCCTGGAGCAGCCA | + |
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Preference number: 1 (lower is better) Translates to: CFGQAAGSWAFAGWA*QPGLEQRIETLEQP Trigger: TGGCTGCTCCAGGGTCTCTATCCTTTGTTCCAACCCTGGTTGTCAGGCCCAGCCAGCAAAGGCCCACGACCCAGCAGCCTGCCCAAAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
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| 3UTR GCA 90 bp | CCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCCCTTaGAACAATTGCGCTCATATCCGGGAGTCCTGGAAGCGGCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: PVSVVGARVGWGFSP*NNCAHIRESWKRLE Trigger: CTCCAGCCGCTTCCAGGACTCCCGGATATGAGCGCAATTGTTGCAAGGGGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
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| 3UTR CCA 90 bp | CCCCTTGCAACAATTGCGCTCATATCCGGGAGTCCTGGAAGCGGCTaGAGCCGTTACTGCCCACGATGGGAATCTGGGCCTTGTCCGGGT | + |
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Preference number: 1 (lower is better) Translates to: PLATIALISGSPGSG*SRYCPRWESGPCPG Trigger: ACCCGGACAAGGCCCAGATTCCCATCGTGGGCAGTAACGGCTCCAGCCGCTTCCAGGACTCCCGGATATGAGCGCAATTGTTGCAAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
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| 3UTR GCA 90 bp | CCTAGTTCTGCACACACTGGGCAGCGGCGGGCGGCACACCGTTATTaGTACAGAGGATTAGAAGTGGCTTGGCCAGGGCTGTCACTGCAG | + |
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Preference number: 1 (lower is better) Translates to: PSSAHTGQRRAAHRY*YRGLEVAWPGLSLQ Trigger: CTGCAGTGACAGCCCTGGCCAAGCCACTTCTAATCCTCTGTAGCAATAACGGTGTGCCGCCCGCCGCTGCCCAGTGTGTGCAGAACTAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
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| 3UTR GCA 90 bp | GTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCCCTTGCAACAATTaGGCTCATATCCGGGAGTCCTGGAAGCGGCTGGAGCCGTTACTG | + |
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Preference number: 1 (lower is better) Translates to: VVGARVGWGFSPCNN*AHIRESWKRLEPLL Trigger: CAGTAACGGCTCCAGCCGCTTCCAGGACTCCCGGATATGAGCGCAATTGTTGCAAGGGGAGAAACCCCACCCAACCCTTGCTCCCACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
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| 3UTR CCA 90 bp | TGGGGTTTCTCCCCTTGCAACAATTGCGCTCATATCCGGGAGTCCTaGAAGCGGCTGGAGCCGTTACTGCCCACGATGGGAATCTGGGCC | + |
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Preference number: 1 (lower is better) Translates to: WGFSPCNNCAHIRES*KRLEPLLPTMGIWA Trigger: GGCCCAGATTCCCATCGTGGGCAGTAACGGCTCCAGCCGCTTCCAGGACTCCCGGATATGAGCGCAATTGTTGCAAGGGGAGAAACCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
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| 3UTR TCA 90 bp | CAAAGGATGTGTAAACACTGGGGACATGAGCAGTGGTGGTCAAGGTaGCAGCAGCCATCCCAGACAGGGTGTGATGGGGCAGGCCTCCAC | + |
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Preference number: 1 (lower is better) Translates to: QRMCKHWGHEQWWSR*QQPSQTGCDGAGLH Trigger: GTGGAGGCCTGCCCCATCACACCCTGTCTGGGATGGCTGCTGTCACCTTGACCACCACTGCTCATGTCCCCAGTGTTTACACATCCTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 |
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| 3UTR GCA 90 bp | AGAAGTCCCCTTCTTTCCCTCCATAAACAAGTGCTTTGGGCAGGCTaGTGGGTCGTGGGCCTTTGCTGGCTGGGCCTGACAACCAGGGTT | + |
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Preference number: 1 (lower is better) Translates to: RSPLLSLHKQVLWAG*WVVGLCWLGLTTRV Trigger: AACCCTGGTTGTCAGGCCCAGCCAGCAAAGGCCCACGACCCAGCAGCCTGCCCAAAGCACTTGTTTATGGAGGGAAAGAAGGGGACTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
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| 3UTR GCA 90 bp | CAAGCTTCCTACAGAGAAGTCCCCTTCTTTCCCTCCATAAACAAGTaGTTTGGGCAGGCTGCTGGGTCGTGGGCCTTTGCTGGCTGGGCC | + |
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Preference number: 1 (lower is better) Translates to: QASYREVPFFPSINK*FGQAAGSWAFAGWA Trigger: GGCCCAGCCAGCAAAGGCCCACGACCCAGCAGCCTGCCCAAAGCACTTGTTTATGGAGGGAAAGAAGGGGACTTCTCTGTAGGAAGCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
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| 3UTR CCA 90 bp | GACAGACGACAAAGCCATGAGGAAGCCGATGGCCACAGCCCAGCCTaGGTACTGGTAGTGGTTGTAGGTGATTGGCCGGTACTGGATCAC | + |
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Preference number: 1 (lower is better) Translates to: DRRQSHEEADGHSPA*VLVVVVGDWPVLDH Trigger: GTGATCCAGTACCGGCCAATCACCTACAACCACTACCAGTACCCAGGCTGGGCTGTGGCCATCGGCTTCCTCATGGCTTTGTCGTCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
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| 3UTR CCA 90 bp | AAGTGTGTCCCCATCTGTGCGGCAGAGCTGGAACAGCGCGTACAGTaGGATGCAGATGACAGACGACAAAGCCATGAGGAAGCCGATGGC | + |
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Preference number: 1 (lower is better) Translates to: KCVPICAAELEQRVQ*DADDRRQSHEEADG Trigger: GCCATCGGCTTCCTCATGGCTTTGTCGTCTGTCATCTGCATCCCACTGTACGCGCTGTTCCAGCTCTGCCGCACAGATGGGGACACACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
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| 3UTR GCA 90 bp | CTCCATAAACAAGTGCTTTGGGCAGGCTGCTGGGTCGTGGGCCTTTaGTGGCTGGGCCTGACAACCAGGGTTGGAACAAAGGATAGAGAC | + |
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Preference number: 1 (lower is better) Translates to: LHKQVLWAGCWVVGL*WLGLTTRVGTKDRD Trigger: GTCTCTATCCTTTGTTCCAACCCTGGTTGTCAGGCCCAGCCAGCAAAGGCCCACGACCCAGCAGCCTGCCCAAAGCACTTGTTTATGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
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| 3UTR CCA 90 bp | CATAAACAAGTGCTTTGGGCAGGCTGCTGGGTCGTGGGCCTTTGCTaGCTGGGCCTGACAACCAGGGTTGGAACAAAGGATAGAGACCCT | + |
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Preference number: 1 (lower is better) Translates to: HKQVLWAGCWVVGLC*LGLTTRVGTKDRDP Trigger: AGGGTCTCTATCCTTTGTTCCAACCCTGGTTGTCAGGCCCAGCCAGCAAAGGCCCACGACCCAGCAGCCTGCCCAAAGCACTTGTTTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
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| 3UTR CCA 90 bp | TTCCTACAGAGAAGTCCCCTTCTTTCCCTCCATAAACAAGTGCTTTaGGCAGGCTGCTGGGTCGTGGGCCTTTGCTGGCTGGGCCTGACA | + |
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Preference number: 1 (lower is better) Translates to: FLQRSPLLSLHKQVL*AGCWVVGLCWLGLT Trigger: TGTCAGGCCCAGCCAGCAAAGGCCCACGACCCAGCAGCCTGCCCAAAGCACTTGTTTATGGAGGGAAAGAAGGGGACTTCTCTGTAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
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| 3UTR GCA 90 bp | GGGCCTTGCATGTCCTGGACACGGCTGTGTCCCTGTTGCTCAGAGTaGAGTCTGGCATCCGGAATGAAGATGGAAAGAGTGACTTGTCTG | + |
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Preference number: 1 (lower is better) Translates to: GPCMSWTRLCPCCSE*SLASGMKMERVTCL Trigger: CAGACAAGTCACTCTTTCCATCTTCATTCCGGATGCCAGACTGCACTCTGAGCAACAGGGACACAGCCGTGTCCAGGACATGCAAGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
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| 3UTR TCA 90 bp | GAGAGAGTTCTAGGATATCCAAGGCCACACAGAGAAACCCTGTCATaGGAGGAAGGGCCTTGCATGTCCTGGACACGGCTGTGTCCCTGT | + |
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Preference number: 1 (lower is better) Translates to: ERVLGYPRPHRETLS*EEGPCMSWTRLCPC Trigger: ACAGGGACACAGCCGTGTCCAGGACATGCAAGGCCCTTCCTCTCATGACAGGGTTTCTCTGTGTGGCCTTGGATATCCTAGAACTCTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
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| 3UTR TCA 90 bp | AGTCATAGTCAAACTGGCAGGGAGGTGGAGTCAGGCAAATCTCTATaGGTTAAAGGTCAGCCTGGCCTACACAGAGAGAGAGTTCTAGGA | + |
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Preference number: 1 (lower is better) Translates to: SHSQTGREVESGKSL*VKGQPGLHRERVLG Trigger: TCCTAGAACTCTCTCTCTGTGTAGGCCAGGCTGACCTTTAACTCATAGAGATTTGCCTGACTCCACCTCCCTGCCAGTTTGACTATGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
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| 3UTR CCA 90 bp | AGAATGAAAAAGATGATAGCCGGAGAAACAAAGCGCCAACAGATCTaGAAGAAGAGAGGCGGGGGAAATCCTAGCATCATCTGGATGTCC | + |
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Preference number: 1 (lower is better) Translates to: RMKKMIAGETKRQQI*KKRGGGNPSIIWMS Trigger: GGACATCCAGATGATGCTAGGATTTCCCCCGCCTCTCTTCTTCCAGATCTGTTGGCGCTTTGTTTCTCCGGCTATCATCTTTTTCATTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGGTTGTAGTGGGAGCGTAGCGCCCAGTCCGGTGCTCCAGGAGAGCGGGGCCGGTGGGAGCAAGGGTTaGGTGGGGTTTCTCCCCTTG | + |
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Preference number: 2 (lower is better) Translates to: GGCSGSVAPSPVLQESGAGGSKG*VGFLPL Trigger: CAAGGGGAGAAACCCCACCCAACCCTTGCTCCCACC...GGCCCCGCTCTCCTGGAGCACCGGACTGGGCGCTACGCTCCCACTACAACCCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
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| 3UTR-3UTR CCA 90 bp | CCCAGACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTaGGTGGGGTTTCTCCCCTTG | + |
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Preference number: 2 (lower is better) Translates to: PRQGVMGQASTCPPPSLRGGSKG*VGFLPL Trigger: CAAGGGGAGAAACCCCACCCAACCCTTGCTCCCACC...ACGGAGACTGGGAGGCGGACAGGTGGAGGCCTGCCCCATCACACCCTGTCTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 |
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| 3UTR CAA 90 bp | TGGAAGCGGCTGGAGCCGTTACTGCCCACGATGGGAATCTGGGCCTaGTCCGGGTGCAGTGGCTGGACCTCAAACCCGTCTTCGGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: WKRLEPLLPTMGIWA*SGCSGWTSNPSSGE Trigger: CTCTCCCGAAGACGGGTTTGAGGTCCAGCCACTGCACCCGGACAAGGCCCAGATTCCCATCGTGGGCAGTAACGGCTCCAGCCGCTTCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCCTTGCAACAATTGCGCTCATATCCGGGAGTCCTGGAAGCGGCTGGAGCCGACAGGTGAGACAGGTTaGCAGACAGGGCAGCGGGCC | + |
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Preference number: 2 (lower is better) Translates to: SPCNNCAHIRESWKRLEPTGETG*QTGQRA Trigger: GGCCCGCTGCCCTGTCTGGCAACCTGTCTCACCTGT...CGGCTCCAGCCGCTTCCAGGACTCCCGGATATGAGCGCAATTGTTGCAAGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
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| 3UTR-3UTR CCA 90 bp | GGGTCTGTTCTGGGGTCAGGAACACTGGTCACGAGGCTGAGGGGAACCGGTGGGGGAGCAAGGGTTGGGTaGGGTTTCTCCCCTTGCAAC | + |
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Preference number: 2 (lower is better) Translates to: GSVLGSGTLVTRLRGTGGGARVG*GFSPCN Trigger: GTTGCAAGGGGAGAAACCCCACCCAACCCTTGCTCC...CCCACCGGTTCCCCTCAGCCTCGTGACCAGTGTTCCTGACCCCAGAACAGACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAGCGGCTGGAGCCGTTACTGCCCACGATGGGAATCTGGGCCTTGTCCGGGTTCCAGTACTCCTCGCTaGGGCTGGTCCTTTGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: GSGWSRYCPRWESGPCPGSSTPR*GWSFAR Trigger: CCTTGCAAAGGACCAGCCCCAGCGAGGAGTACTGGA...ACCCGGACAAGGCCCAGATTCCCATCGTGGGCAGTAACGGCTCCAGCCGCTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
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| 3UTR CAA 90 bp | CCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCCCTaGCAACAATTGCGCTCATATCCGGGAGTCCTGGAAGCGGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: PSLRGGSKGWVGFLP*QQLRSYPGVLEAAG Trigger: TCCAGCCGCTTCCAGGACTCCCGGATATGAGCGCAATTGTTGCAAGGGGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
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| 3UTR-3UTR TCA 90 bp | CAGAGGCTAGGGTCTGTTCTGGGGTCAGGAACACTGGTCACGAGGCTGAGGGGACACACACCCCATACCTaGGTACCCAGCCCCAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: QRLGSVLGSGTLVTRLRGHTPHT*VPSPSK Trigger: CTTGCTGGGGCTGGGTACTCAGGTATGGGGTGTGTG...TCCCCTCAGCCTCGTGACCAGTGTTCCTGACCCCAGAACAGACCCTAGCCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
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| 3UTR CAA 90 bp | CGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCCCTTGCAACAATaGCGCTCATATCCGGGAGTCCTGGAAGCGGCTGGAGCCGTTACT | + |
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Preference number: 2 (lower is better) Translates to: RGGSKGWVGFLPLQQ*RSYPGVLEAAGAVT Trigger: AGTAACGGCTCCAGCCGCTTCCAGGACTCCCGGATATGAGCGCAATTGTTGCAAGGGGAGAAACCCCACCCAACCCTTGCTCCCACCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCCTTGCAACAATTGCGCTCATATCCGGGAGTCCTGGAAGCGGCTGGAGCCGGGAGCAAGGGTTGGGTaGGGTTTCTCCCCTTGCAAC | + |
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Preference number: 2 (lower is better) Translates to: SPCNNCAHIRESWKRLEPGARVG*GFSPCN Trigger: GTTGCAAGGGGAGAAACCCCACCCAACCCTTGCTCC...CGGCTCCAGCCGCTTCCAGGACTCCCGGATATGAGCGCAATTGTTGCAAGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAGGCTAGGGTCTGTTCTGGGGTCAGGAACACTGGTCACGAGGCTGAGGGGACGTTACTGCCCACGATaGGAATCTGGGCCTTGTCCG | + |
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Preference number: 2 (lower is better) Translates to: QRLGSVLGSGTLVTRLRGRYCPR*ESGPCP Trigger: CGGACAAGGCCCAGATTCCCATCGTGGGCAGTAACG...TCCCCTCAGCCTCGTGACCAGTGTTCCTGACCCCAGAACAGACCCTAGCCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGCAGAGGCTAGGGTCTGTTCTGGGGTCAGGAACACTGGTCACGAGGCTGAGCATATCCGGGAGTCCTaGAAGCGGCTGGAGCCGTTA | + |
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Preference number: 2 (lower is better) Translates to: WAEARVCSGVRNTGHEAEHIRES*KRLEPL Trigger: TAACGGCTCCAGCCGCTTCCAGGACTCCCGGATATG...CTCAGCCTCGTGACCAGTGTTCCTGACCCCAGAACAGACCCTAGCCTCTGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCCTTGCAACAATTGCGCTCATATCCGGGAGTCCTGGAAGCGGCTGGAGCCGTTTCCCACCCCCAGCTaGTGTCTTGGCATCCAAAGG | + |
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Preference number: 2 (lower is better) Translates to: SPCNNCAHIRESWKRLEPFPTPS*CLGIQR Trigger: CCTTTGGATGCCAAGACAGCAGCTGGGGGTGGGAAA...CGGCTCCAGCCGCTTCCAGGACTCCCGGATATGAGCGCAATTGTTGCAAGGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCAGAGGGCACAGAGGACGGACAAACGGACTGCGGGTCTTGGGAGAAGGTGCCATAAACAAGTGCTTTaGGCAGGCTGCTGGGTCGTG | + |
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Preference number: 2 (lower is better) Translates to: LQRAQRTDKRTAGLGRRCHKQVL*AGCWVV Trigger: CACGACCCAGCAGCCTGCCCAAAGCACTTGTTTATG...GCACCTTCTCCCAAGACCCGCAGTCCGTTTGTCCGTCCTCTGTGCCCTCTGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
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| 3UTR-3UTR TCA 90 bp | ACCCCCAGCTGCTGTCTTGGCATCCAAAGGATGTGTAAACACTGGGGACATGAGATCCCAGACAGGGTGTaGTGGGGCAGGCCTCCACCT | + |
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Preference number: 2 (lower is better) Translates to: TPSCCLGIQRMCKHWGHEIPDRV*WGRPPP Trigger: AGGTGGAGGCCTGCCCCATCACACCCTGTCTGGGAT...CTCATGTCCCCAGTGTTTACACATCCTTTGGATGCCAAGACAGCAGCTGGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCCCACCCCCAGCTGCTGTCTTGGCATCCAAAGGATGTGTAAACACTGGGGACTTTGGGCAGGCTGCTaGGTCGTGGGCCTTTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: FPTPSCCLGIQRMCKHWGLWAGC*VVGLCW Trigger: CCAGCAAAGGCCCACGACCCAGCAGCCTGCCCAAAG...TCCCCAGTGTTTACACATCCTTTGGATGCCAAGACAGCAGCTGGGGGTGGGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
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| 3UTR-3UTR CCA 90 bp | ACTGGTCACGAGGCTGAGGGGAACCGGTGGGATGTGGACACAGAACCTCTTATCCCTTCCCCAGGGCTCTaGGCTCAAGCTTCCTACAGA | + |
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Preference number: 2 (lower is better) Translates to: TGHEAEGNRWDVDTEPLIPSPGL*AQASYR Trigger: TCTGTAGGAAGCTTGAGCCCAGAGCCCTGGGGAAGG...GATAAGAGGTTCTGTGTCCACATCCCACCGGTTCCCCTCAGCCTCGTGACCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
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| 3UTR-3UTR CCA 90 bp | TGCCACCCGAGACACATCCACACCCAGGTGATTGGCCATGAAGCCCAGGATGGAACTCCTCGCTGGGGCTaGTCCTTTGCAAGGTGTAGT | + |
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Preference number: 2 (lower is better) Translates to: CHPRHIHTQVIGHEAQDGTPRWG*SFARCS Trigger: ACTACACCTTGCAAAGGACCAGCCCCAGCGAGGAGT...TCCATCCTGGGCTTCATGGCCAATCACCTGGGTGTGGATGTGTCTCGGGTGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTGTCTTGGCATCCAAAGGATGTGTAAACACTGGGGACATGAGCAGTGGTGGTCCCAGTCTCCGTGGTaGGAGCAAGGGTTGGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: CCLGIQRMCKHWGHEQWWSQSPW*EQGLGG Trigger: CCCACCCAACCCTTGCTCCCACCACGGAGACTGGGA...CCACCACTGCTCATGTCCCCAGTGTTTACACATCCTTTGGATGCCAAGACAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCCCACCCCCAGCTGCTGTCTTGGCATCCAAAGGATGTGTAAACACTGGGGAGTGGGCAAGGGAATGTaGAACAGGGTCCCCTTCCCC | + |
|
Preference number: 2 (lower is better) Translates to: FPTPSCCLGIQRMCKHWGVGKGM*NRVPFP Trigger: GGGGAAGGGGACCCTGTTCCACATTCCCTTGCCCAC...TCCCCAGTGTTTACACATCCTTTGGATGCCAAGACAGCAGCTGGGGGTGGGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
||
| 3UTR-3UTR CCA 90 bp | TCCTGGAAGCGGCTGGAGCCGTTACTGCCCACGATGGGAATCTGGGCCTTGTCCCACGAACAAACAGAATaGTCAGCACCACATAGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: SWKRLEPLLPTMGIWALSHEQTE*SAPHRG Trigger: TCCCCTATGTGGTGCTGACCATTCTGTTTGTTCGTG...GGACAAGGCCCAGATTCCCATCGTGGGCAGTAACGGCTCCAGCCGCTTCCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCTGTCTTGGCATCCAAAGGATGTGTAAACACTGGGGACATGAGCAGTGGTGGGGTGGGAGCAAGGGTTaGGTGGGGTTTCTCCCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: CCLGIQRMCKHWGHEQWWGGSKG*VGFLPL Trigger: CAAGGGGAGAAACCCCACCCAACCCTTGCTCCCACC...CCACCACTGCTCATGTCCCCAGTGTTTACACATCCTTTGGATGCCAAGACAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 |
||
| 3UTR CAA 90 bp | GGAGGCAGAACTACAGCCACGGCTATCAGAATAAGGGCCCGCGTTTaGTCCCAGACCACTCCCTCAAAACACACACACACACACACACAC | + |
|
Preference number: 2 (lower is better) Translates to: GGRTTATAIRIRARV*SQTTPSKHTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTGTTTTGAGGGAGTGGTCTGGGACAAAACGCGGGCCCTTATTCTGATAGCCGTGGCTGTAGTTCTGCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| 3UTR CAA 90 bp | ATGAGAGGAAGGGCCTTGCATGTCCTGGACACGGCTGTGTCCCTGTaGCTCAGAGTGCAGTCTGGCATCCGGAATGAAGATGGAAAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: MRGRALHVLDTAVSL*LRVQSGIRNEDGKS Trigger: ACTCTTTCCATCTTCATTCCGGATGCCAGACTGCACTCTGAGCAACAGGGACACAGCCGTGTCCAGGACATGCAAGGCCCTTCCTCTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTCCCACCCCCAGCTGCTGTCTTGGCATCCAAAGGATGTGTAAACACTGGGGACCCTCCATAAACAAGTaGTTTGGGCAGGCTGCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: FPTPSCCLGIQRMCKHWGPSINK*FGQAAG Trigger: CCCAGCAGCCTGCCCAAAGCACTTGTTTATGGAGGG...TCCCCAGTGTTTACACATCCTTTGGATGCCAAGACAGCAGCTGGGGGTGGGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
||
| 3UTR-3UTR CCA 90 bp | TTTCCCACCCCCAGCTGCTGTCTTGGCATCCAAAGGATGTGTAAACACTGGGGAGGCTGGGGCAGGGGATaGCAACCACAGGTAATACAA | + |
|
Preference number: 2 (lower is better) Translates to: FPTPSCCLGIQRMCKHWGGWGRG*QPQVIQ Trigger: TTGTATTACCTGTGGTTGCCATCCCCTGCCCCAGCC...TCCCCAGTGTTTACACATCCTTTGGATGCCAAGACAGCAGCTGGGGGTGGGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
||
| 3UTR-3UTR GCA 90 bp | AGTTCTAGGATATCCAAGGCCACACAGAGAAACCCTGTCATGAGAGGAAGGGCCCCCTGTTGCTCAGAGTaGAGTCTGGCATCCGGAATG | + |
|
Preference number: 2 (lower is better) Translates to: SSRISKATQRNPVMRGRAPCCSE*SLASGM Trigger: CATTCCGGATGCCAGACTGCACTCTGAGCAACAGGG...GGCCCTTCCTCTCATGACAGGGTTTCTCTGTGTGGCCTTGGATATCCTAGAACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGTCTGTTCTGGGGTCAGGAACACTGGTCACGAGGCTGAGGGGAACCGGTGGGGCGGGCCGGGAGCCATaGGTGAGGTTGGAAGCGTCC | + |
|
Preference number: 3 (lower is better) Translates to: GSVLGSGTLVTRLRGTGGAGREP*VRLEAS Trigger: GGACGCTTCCAACCTCACCAATGGCTCCCGGCCCGC...CCCACCGGTTCCCCTCAGCCTCGTGACCAGTGTTCCTGACCCCAGAACAGACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| 3UTR TCA 72 bp | GTGGTCAAGGTGACAGCAGCCATCCCAGACAGGGTGTaGTGGGGCAGGCCTCCACCTGTCCGCCTCCCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: VVKVTAAIPDRV*WGRPPPVRLPV Trigger: GACTGGGAGGCGGACAGGTGGAGGCCTGCCCCATCACACCCTGTCTGGGATGGCTGCTGTCACCTTGACCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 |
||
| 3UTR CCA 72 bp | GCCCACGATGGGAATCTGGGCCTTGTCCGGGTGCAGTaGCTGGACCTCAAACCCGTCTTCGGGAGAGGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: AHDGNLGLVRVQ*LDLKPVFGRGG Trigger: ACCCCCTCTCCCGAAGACGGGTTTGAGGTCCAGCCACTGCACCCGGACAAGGCCCAGATTCCCATCGTGGGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCCATCCCAGACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCCAGTTGGTGGGAGCAAGGGTaGGGTGGGGTTTCTCCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: SHPRQGVMGQASTCPPPSWWEQG*GGVSPL Trigger: AAGGGGAGAAACCCCACCCAACCCTTGCTCCCACCA...ACTGGGAGGCGGACAGGTGGAGGCCTGCCCCATCACACCCTGTCTGGGATGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 |
||
| 3UTR CCA 72 bp | AGTCCTGGAAGCGGCTGGAGCCGTTACTGCCCACGATaGGAATCTGGGCCTTGTCCGGGTGCAGTGGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SPGSGWSRYCPR*ESGPCPGAVAG Trigger: TCCAGCCACTGCACCCGGACAAGGCCCAGATTCCCATCGTGGGCAGTAACGGCTCCAGCCGCTTCCAGGACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGTCTGTTCTGGGGTCAGGAACACTGGTCACGAGGCTGAGGGGAACCGGTGGGTGGTGGGAGCAAGGGTaGGGTGGGGTTTCTCCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: GSVLGSGTLVTRLRGTGGWWEQG*GGVSPL Trigger: AAGGGGAGAAACCCCACCCAACCCTTGCTCCCACCA...CCCACCGGTTCCCCTCAGCCTCGTGACCAGTGTTCCTGACCCCAGAACAGACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGTCCTGGAAGCGGCTGGAGCCGTTACTGCCCACGATGGGAATCTGGGCCTTGGAGCCATTGGTGAGGTaGGAAGCGTCCAGCACACCG | + |
|
Preference number: 3 (lower is better) Translates to: ESWKRLEPLLPTMGIWALEPLVR*EASSTP Trigger: CGGTGTGCTGGACGCTTCCAACCTCACCAATGGCTC...CAAGGCCCAGATTCCCATCGTGGGCAGTAACGGCTCCAGCCGCTTCCAGGACTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| 3UTR GCA 72 bp | GCACACACTGGGCAGCGGCGGGCGGCACACCGTTATTaGTACAGAGGATTAGAAGTGGCTTGGCCAGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: AHTGQRRAAHRY*YRGLEVAWPGL Trigger: CAGCCCTGGCCAAGCCACTTCTAATCCTCTGTAGCAATAACGGTGTGCCGCCCGCCGCTGCCCAGTGTGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
||
| 3UTR GCA 72 bp | ATATCCGGGAGTCCTGGAAGCGGCTGGAGCCGTTACTaGCCACGATGGGAATCTGGGCCTTGTCCGGGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: ISGSPGSGWSRY*PRWESGPCPGA Trigger: TGCACCCGGACAAGGCCCAGATTCCCATCGTGGGCAGTAACGGCTCCAGCCGCTTCCAGGACTCCCGGATAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| 3UTR-3UTR CAA 90 bp | CGGGCACATGGACTGAGGCCATTTGGCACATTGAATGGGGTTAGCACGTCTGGGCTGGGTCGTGGGCCTTaGCTGGCTGGGCCTGACAAC | + |
|
Preference number: 3 (lower is better) Translates to: RAHGLRPFGTLNGVSTSGLGRGP*LAGPDN Trigger: GTTGTCAGGCCCAGCCAGCAAAGGCCCACGACCCAG...CCCAGACGTGCTAACCCCATTCAATGTGCCAAATGGCCTCAGTCCATGTGCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
||
| 3UTR TCA 72 bp | CAGGCTGCTGGGTCGTGGGCCTTTGCTGGCTGGGCCTaGCAACCAGGGTTGGAACAAAGGATAGAGACCCTG | + |
|
Preference number: 3 (lower is better) Translates to: QAAGSWAFAGWA*QPGLEQRIETL Trigger: CAGGGTCTCTATCCTTTGTTCCAACCCTGGTTGTCAGGCCCAGCCAGCAAAGGCCCACGACCCAGCAGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
||
| 3UTR GCA 72 bp | CAAGTGCTTTGGGCAGGCTGCTGGGTCGTGGGCCTTTaGTGGCTGGGCCTGACAACCAGGGTTGGAACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: QVLWAGCWVVGL*WLGLTTRVGTK Trigger: CTTTGTTCCAACCCTGGTTGTCAGGCCCAGCCAGCAAAGGCCCACGACCCAGCAGCCTGCCCAAAGCACTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
||
| 3UTR GCA 72 bp | TTACTGCCCACGATGGGAATCTGGGCCTTGTCCGGGTaGAGTGGCTGGACCTCAAACCCGTCTTCGGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LLPTMGIWALSG*SGWTSNPSSGE Trigger: CTCTCCCGAAGACGGGTTTGAGGTCCAGCCACTGCACCCGGACAAGGCCCAGATTCCCATCGTGGGCAGTAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| 3UTR CCA 72 bp | GTGCTTTGGGCAGGCTGCTGGGTCGTGGGCCTTTGCTaGCTGGGCCTGACAACCAGGGTTGGAACAAAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: VLWAGCWVVGLC*LGLTTRVGTKD Trigger: ATCCTTTGTTCCAACCCTGGTTGTCAGGCCCAGCCAGCAAAGGCCCACGACCCAGCAGCCTGCCCAAAGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
||
| 3UTR CCA 72 bp | TGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTaGGTGGGGTTTCTCCCCTTGCAACAATTGCGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: CPPPSLRGGSKG*VGFLPLQQLRS Trigger: TGAGCGCAATTGTTGCAAGGGGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| 3UTR TCA 72 bp | GGTCTGTTCTGGGGTCAGGAACACTGGTCACGAGGCTaGGGGGAACCGGTGGGATGTGGACACAGAACCTCT | + |
|
Preference number: 3 (lower is better) Translates to: GLFWGQEHWSRG*GEPVGCGHRTS Trigger: AGAGGTTCTGTGTCCACATCCCACCGGTTCCCCTCAGCCTCGTGACCAGTGTTCCTGACCCCAGAACAGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 |
||
| 3UTR GCA 72 bp | GCAAGGGTTGGGTGGGGTTTCTCCCCTTGCAACAATTaGGCTCATATCCGGGAGTCCTGGAAGCGGCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: ARVGWGFSPCNN*AHIRESWKRLE Trigger: CTCCAGCCGCTTCCAGGACTCCCGGATATGAGCGCAATTGTTGCAAGGGGAGAAACCCCACCCAACCCTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| 3UTR CCA 72 bp | CTTTCCCTCCATAAACAAGTGCTTTGGGCAGGCTGCTaGGTCGTGGGCCTTTGCTGGCTGGGCCTGACAACC | + |
|
Preference number: 3 (lower is better) Translates to: LSLHKQVLWAGC*VVGLCWLGLTT Trigger: GGTTGTCAGGCCCAGCCAGCAAAGGCCCACGACCCAGCAGCCTGCCCAAAGCACTTGTTTATGGAGGGAAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
||
| 3UTR CCA 72 bp | ACAATTGCGCTCATATCCGGGAGTCCTGGAAGCGGCTaGAGCCGTTACTGCCCACGATGGGAATCTGGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: TIALISGSPGSG*SRYCPRWESGP Trigger: AGGCCCAGATTCCCATCGTGGGCAGTAACGGCTCCAGCCGCTTCCAGGACTCCCGGATATGAGCGCAATTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| 3UTR CCA 72 bp | TCCCCTTGCAACAATTGCGCTCATATCCGGGAGTCCTaGAAGCGGCTGGAGCCGTTACTGCCCACGATGGGA | + |
|
Preference number: 3 (lower is better) Translates to: SPCNNCAHIRES*KRLEPLLPTMG Trigger: TCCCATCGTGGGCAGTAACGGCTCCAGCCGCTTCCAGGACTCCCGGATATGAGCGCAATTGTTGCAAGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| 3UTR CCA 72 bp | CGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTaGGGTTTCTCCCCTTGCAACAATTGCGCTCATATC | + |
|
Preference number: 3 (lower is better) Translates to: RLPVSVVGARVG*GFSPCNNCAHI Trigger: GATATGAGCGCAATTGTTGCAAGGGGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGGTCTCTAGGAGGCAGAACTACAGCCACGGCTATCAGAATAAGGGCCCGCTTGGCCTCCAGGATCTaGTCCCATTGTGGGGTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PGSLGGRTTATAIRIRARLASRI*SHCGVR Trigger: CCTGACCCCACAATGGGACAAGATCCTGGAGGCCAA...GCGGGCCCTTATTCTGATAGCCGTGGCTGTAGTTCTGCCTCCTAGAGACCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| 3UTR-3UTR CAA 90 bp | TCATATCCGGGAGTCCTGGAAGCGGCTGGAGCCGTTACTGCCCACGATGGGAATCTCCTCCAAAGTGCTTaGGACACTGCTTCCCCATGC | + |
|
Preference number: 3 (lower is better) Translates to: SYPGVLEAAGAVTAHDGNLLQSA*DTASPC Trigger: GCATGGGGAAGCAGTGTCCAAAGCACTTTGGAGGAG...ATTCCCATCGTGGGCAGTAACGGCTCCAGCCGCTTCCAGGACTCCCGGATATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| 3UTR GCA 72 bp | GTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCCCTTaGAACAATTGCGCTCATATCCGGGAGTCCTGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: VVGARVGWGFSP*NNCAHIRESWK Trigger: CTTCCAGGACTCCCGGATATGAGCGCAATTGTTGCAAGGGGAGAAACCCCACCCAACCCTTGCTCCCACCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| 3UTR GCA 72 bp | GGGCCTTGCATGTCCTGGACACGGCTGTGTCCCTGTTaGTCAGAGTGCAGTCTGGCATCCGGAATGAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: GPCMSWTRLCPC*SECSLASGMKM Trigger: CATCTTCATTCCGGATGCCAGACTGCACTCTGAGCAACAGGGACACAGCCGTGTCCAGGACATGCAAGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| 3UTR CCA 72 bp | CCCCCAGACCTTGGCCTCCAGGATCTTGTCCCATTGTaGGGTCAGGTAGTACATGATACCCGTGAAGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: PPDLGLQDLVPL*GQVVHDTREGS Trigger: GGAGCCTTCACGGGTATCATGTACTACCTGACCCCACAATGGGACAAGATCCTGGAGGCCAAGGTCTGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| 3UTR CCA 72 bp | CAAAGCCATGAGGAAGCCGATGGCCACAGCCCAGCCTaGGTACTGGTAGTGGTTGTAGGTGATTGGCCGGTA | + |
|
Preference number: 3 (lower is better) Translates to: QSHEEADGHSPA*VLVVVVGDWPV Trigger: TACCGGCCAATCACCTACAACCACTACCAGTACCCAGGCTGGGCTGTGGCCATCGGCTTCCTCATGGCTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| 3UTR TCA 72 bp | TGTAAACACTGGGGACATGAGCAGTGGTGGTCAAGGTaGCAGCAGCCATCCCAGACAGGGTGTGATGGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: CKHWGHEQWWSR*QQPSQTGCDGA Trigger: TGCCCCATCACACCCTGTCTGGGATGGCTGCTGTCACCTTGACCACCACTGCTCATGTCCCCAGTGTTTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 |
||
| 3UTR CCA 72 bp | TGCAGGCAGGCCTGGAAGACACACTGGACCCAAGGCTaGGGCAGGGGATGGCAACCACAGGTAATACAATTT | + |
|
Preference number: 3 (lower is better) Translates to: CRQAWKTHWTQG*GRGWQPQVIQF Trigger: AAATTGTATTACCTGTGGTTGCCATCCCCTGCCCCAGCCTTGGGTCCAGTGTGTCTTCCAGGCCTGCCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
||
| 3UTR CCA 72 bp | CCCATCTGTGCGGCAGAGCTGGAACAGCGCGTACAGTaGGATGCAGATGACAGACGACAAAGCCATGAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: PICAAELEQRVQ*DADDRRQSHEE Trigger: TTCCTCATGGCTTTGTCGTCTGTCATCTGCATCCCACTGTACGCGCTGTTCCAGCTCTGCCGCACAGATGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAACCGGTGGGATGTGGACACAGAACCTCTTATCCCATAGTGAAACAGCTCAGTGGTGGGAGCAAGGGTaGGGTGGGGTTTCTCCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: GTGGMWTQNLLSHSETAQWWEQG*GGVSPL Trigger: AAGGGGAGAAACCCCACCCAACCCTTGCTCCCACCA...CTGAGCTGTTTCACTATGGGATAAGAGGTTCTGTGTCCACATCCCACCGGTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 |
||
| 3UTR TCA 72 bp | GGGAAGCCGCACTTCCCCAAAGTTTCCAATGTCGTCTaGCAGCTTCAGCACATACAGCCTCCAGTACTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: GKPHFPKVSNVV*QLQHIQPPVLL Trigger: GAGGAGTACTGGAGGCTGTATGTGCTGAAGCTGTCAGACGACATTGGAAACTTTGGGGAAGTGCGGCTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| 3UTR GCA 72 bp | CATTTTTCAAACGCTGAAGAAGTGTGTCCCCATCTGTaGGGCAGAGCTGGAACAGCGCGTACAGTGGGATGC | + |
|
Preference number: 3 (lower is better) Translates to: HFSNAEEVCPHL*GRAGTARTVGC Trigger: GCATCCCACTGTACGCGCTGTTCCAGCTCTGCCGCACAGATGGGGACACACTTCTTCAGCGTTTGAAAAATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| 3UTR GCA 72 bp | ATGTCCTGGACACGGCTGTGTCCCTGTTGCTCAGAGTaGAGTCTGGCATCCGGAATGAAGATGGAAAGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: MSWTRLCPCCSE*SLASGMKMERV Trigger: CACTCTTTCCATCTTCATTCCGGATGCCAGACTGCACTCTGAGCAACAGGGACACAGCCGTGTCCAGGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| 3UTR CCA 72 bp | AGCCCAGCCTGGGTACTGGTAGTGGTTGTAGGTGATTaGCCGGTACTGGATCACCGTGAAGATGAGAATGAA | + |
|
Preference number: 3 (lower is better) Translates to: SPAWVLVVVVGD*PVLDHREDENE Trigger: TTCATTCTCATCTTCACGGTGATCCAGTACCGGCCAATCACCTACAACCACTACCAGTACCCAGGCTGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCCACCCCCAGCTGCTGTCTTGGCATCCAAAGGATGTGTAAACACTGGGGAACTTTCCCTGAAGACTaGACTCCTCGGATGAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: FPTPSCCLGIQRMCKHWGTFPED*TPRMRQ Trigger: CTGTCTCATCCGAGGAGTCAAGTCTTCAGGGAAAGT...TCCCCAGTGTTTACACATCCTTTGGATGCCAAGACAGCAGCTGGGGGTGGGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| 3UTR TCA 72 bp | CAAACTGGCAGGGAGGTGGAGTCAGGCAAATCTCTATaGGTTAAAGGTCAGCCTGGCCTACACAGAGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: QTGREVESGKSL*VKGQPGLHRER Trigger: TCTCTCTCTGTGTAGGCCAGGCTGACCTTTAACTCATAGAGATTTGCCTGACTCCACCTCCCTGCCAGTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| 3UTR CCA 72 bp | AAGATGATAGCCGGAGAAACAAAGCGCCAACAGATCTaGAAGAAGAGAGGCGGGGGAAATCCTAGCATCATC | + |
|
Preference number: 3 (lower is better) Translates to: KMIAGETKRQQI*KKRGGGNPSII Trigger: GATGATGCTAGGATTTCCCCCGCCTCTCTTCTTCCAGATCTGTTGGCGCTTTGTTTCTCCGGCTATCATCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| CDS-3UTR TCA 90 bp | GGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGCCGGGAGCCATTGGTaGGGTTGGAAGCGTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLHLSASQSPWWEQGLGGAGSHW*GWKRPA Trigger: TGCTGGACGCTTCCAACCTCACCAATGGCTCCCGGC...CCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGACAGGTGAGACAGGTTaGCAGACAGGGCAGCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRPPPVRLPVSVVGARVGTGETG*QTGQRA Trigger: GGCCCGCTGCCCTGTCTGGCAACCTGTCTCACCTGT...CCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCCTGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR GCA 90 bp | GGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGCCCAGGCCCATGGTCTaGCACCCGAGACACATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GLHLSASQSPWWEQGLGGPRPMV*HPRHIH Trigger: GTGGATGTGTCTCGGGTGGCAGACCATGGGCCTGGG...CCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR GCA 90 bp | GCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGGCCCAGGGCAGCACGTaGGTCATGGACGAGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ASTCPPPSLRGGSKGWVGAQGST*VMDEKK Trigger: CTTCTTCTCGTCCATGACGCACGTGCTGCCCTGGGC...CCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGACAGGTGAGACAGGTTaGCAGACAGGGCAGCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QASTCPPPSLRGGSKGWVTGETG*QTGQRA Trigger: GGCCCGCTGCCCTGTCTGGCAACCTGTCTCACCTGT...CACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGACAGGTGAGACAGGTTaGCAGACAGGGCAGCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TGCDGAGLHLSASQSPWWTGETG*QTGQRA Trigger: GGCCCGCTGCCCTGTCTGGCAACCTGTCTCACCTGT...CCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCCTGCCCCATCACACCCTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
||
| CDS-3UTR GCA 90 bp | GGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGTGGGCCTTGTCCGGGTaGAGTGGCTGGACCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GLHLSASQSPWWEQGLGGWALSG*SGWTSN Trigger: GTTTGAGGTCCAGCCACTGCACCCGGACAAGGCCCA...CCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTCTGGTCCTTCTTGGTaGCCTCGCTGGGCACAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GRPPPVRLPVSVVGARVGSGPSW*PRWAQH Trigger: GTGCTGTGCCCAGCGAGGCCACCAAGAAGGACCAGA...CCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCCTGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 |
||
| CDS-3UTR CCA 90 bp | GGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGTCTGTGCGGCAGAGCTaGAACAGCGCGTACAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GLHLSASQSPWWEQGLGGSVRQS*NSAYSG Trigger: CCCACTGTACGCGCTGTTCCAGCTCTGCCGCACAGA...CCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGCCCACGATGGGAATCTaGGCCTTGTCCGGGTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GLHLSASQSPWWEQGLGGPTMGI*ALSGCS Trigger: ACTGCACCCGGACAAGGCCCAGATTCCCATCGTGGG...CCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| 3UTR CAA 72 bp | GACAGGTTGCCAGACAGGGCAGCGGGCCGGGAGCCATaGGTGAGGTTGGAAGCGTCCAGCACACCGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: DRLPDRAAGREP*VRLEASSTPAQ Trigger: CTGTGCCGGTGTGCTGGACGCTTCCAACCTCACCAATGGCTCCCGGCCCGCTGCCCTGTCTGGCAACCTGTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| CDS-3UTR TCA 90 bp | CAGCAGCCATCCCAGACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCCCCAGTTGCCCCGTGTaGGGTTCTGGTCCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QQPSQTGCDGAGLHLSASPSCPV*GSGPSW Trigger: CCAAGAAGGACCAGAACCTCACACGGGGCAACTGGG...GGAGGCGGACAGGTGGAGGCCTGCCCCATCACACCCTGTCTGGGATGGCTGCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 |
||
| CDS-3UTR TCA 90 bp | GCAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTCCCAGTTGCCCCGTGTaGGGTTCTGGTCCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGLHLSASQSPWWEQGLGPSCPV*GSGPSW Trigger: CCAAGAAGGACCAGAACCTCACACGGGGCAACTGGG...ACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 |
||
| CDS-3UTR TCA 90 bp | CCATCCCAGACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCCAGTCTGCCGGGAGCCATTGGTaGGGTTGGAAGCGTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSQTGCDGAGLHLSASQSAGSHW*GWKRPA Trigger: TGCTGGACGCTTCCAACCTCACCAATGGCTCCCGGC...AGACTGGGAGGCGGACAGGTGGAGGCCTGCCCCATCACACCCTGTCTGGGATGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
||
| CDS-3UTR TCA 90 bp | CTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTGCCGGGAGCCATTGGTaGGGTTGGAAGCGTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LHLSASQSPWWEQGLGGVAGSHW*GWKRPA Trigger: TGCTGGACGCTTCCAACCTCACCAATGGCTCCCGGC...AACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR TCA 90 bp | CCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCCCTTGGCCGGGAGCCATTGGTaGGGTTGGAAGCGTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PPPSLRGGSKGWVGFLPLAGSHW*GWKRPA Trigger: TGCTGGACGCTTCCAACCTCACCAATGGCTCCCGGC...CAAGGGGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR TCA 90 bp | GCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGACATCCACACCCAGGTaGTTGGCCATGAAGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASTCPPPSLRGGSKGWVGTSTPR*LAMKPR Trigger: CCTGGGCTTCATGGCCAATCACCTGGGTGTGGATGT...CCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGCATCCACAATGGCAGTaGCCAGGGTCTCTAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRPPPVRLPVSVVGARVGHPQWQ*PGSLGG Trigger: GCCTCCTAGAGACCCTGGTCACTGCCATTGTGGATG...CCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCCTGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR GCA 90 bp | CCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCCCTTGACAGGTGAGACAGGTTaGCAGACAGGGCAGCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PPPSLRGGSKGWVGFLPLTGETG*QTGQRA Trigger: GGCCCGCTGCCCTGTCTGGCAACCTGTCTCACCTGT...CAAGGGGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR GCA 90 bp | CTGGGCCTCCGACCTGGTGGAGGGTGGGCAAGGGAATGTGGAACAGGGTCCCCTCCCAGGCCCATGGTCTaGCACCCGAGACACATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LGLRPGGGWARECGTGSPPRPMV*HPRHIH Trigger: GTGGATGTGTCTCGGGTGGCAGACCATGGGCCTGGG...AGGGGACCCTGTTCCACATTCCCTTGCCCACCCTCCACCAGGTCGGAGGCCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
||
| CDS-3UTR GCA 90 bp | AGCAGCCATCCCAGACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCCGTGTGTCCCCATCTGTaGGGCAGAGCTGGAACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SSHPRQGVMGQASTCPPPVCPHL*GRAGTA Trigger: CGCTGTTCCAGCTCTGCCGCACAGATGGGGACACAC...GGGAGGCGGACAGGTGGAGGCCTGCCCCATCACACCCTGTCTGGGATGGCTGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
||
| CDS-3UTR CCA 90 bp | GGCAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGGGCCACAGCCCAGCCTaGGTACTGGTAGTGGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GRPPPVRLPVSVVGARVGGHSPA*VLVVVV Trigger: TACAACCACTACCAGTACCCAGGCTGGGCTGTGGCC...CCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCCTGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CCA 90 bp | CCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTCTGTGCGGCAGAGCTaGAACAGCGCGTACAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PPPVRLPVSVVGARVGWGSVRQS*NSAYSG Trigger: CCCACTGTACGCGCTGTTCCAGCTCTGCCGCACAGA...ACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGTCCGGGTGCAGTGGCTaGACCTCAAACCCGTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: TGCDGAGLHLSASQSPWWSGCSG*TSNPSS Trigger: CGAAGACGGGTTTGAGGTCCAGCCACTGCACCCGGA...CCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCCTGCCCCATCACACCCTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
||
| CDS-3UTR CCA 90 bp | GGCAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGCATATCCGGGAGTCCTaGAAGCGGCTGGAGCCGTTA | + |
|
Preference number: 4 (lower is better) Translates to: GRPPPVRLPVSVVGARVGHIRES*KRLEPL Trigger: TAACGGCTCCAGCCGCTTCCAGGACTCCCGGATATG...CCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCCTGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR TCA 90 bp | AGCCATCCCAGACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCCAGTCCCAGTTGCCCCGTGTaGGGTTCTGGTCCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SHPRQGVMGQASTCPPPSPSCPV*GSGPSW Trigger: CCAAGAAGGACCAGAACCTCACACGGGGCAACTGGG...ACTGGGAGGCGGACAGGTGGAGGCCTGCCCCATCACACCCTGTCTGGGATGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 |
||
| CDS-3UTR TCA 90 bp | AGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGCATCCACAATGGCAGTaGCCAGGGTCTCTAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RPPPVRLPVSVVGARVGWHPQWQ*PGSLGG Trigger: GCCTCCTAGAGACCCTGGTCACTGCCATTGTGGATG...CCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR TCA 90 bp | CAGCAGCCATCCCAGACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCCATCCACAATGGCAGTaGCCAGGGTCTCTAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QQPSQTGCDGAGLHLSASHPQWQ*PGSLGG Trigger: GCCTCCTAGAGACCCTGGTCACTGCCATTGTGGATG...GGAGGCGGACAGGTGGAGGCCTGCCCCATCACACCCTGTCTGGGATGGCTGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
||
| CDS-3UTR GCA 90 bp | GTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCCCTGCCCAGGGCAGCACGTaGGTCATGGACGAGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VRLPVSVVGARVGWGFSPAQGST*VMDEKK Trigger: CTTCTTCTCGTCCATGACGCACGTGCTGCCCTGGGC...AGGGGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR GCA 90 bp | CCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCCCTTGGCCCAGGGCAGCACGTaGGTCATGGACGAGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PPPSLRGGSKGWVGFLPLAQGST*VMDEKK Trigger: CTTCTTCTCGTCCATGACGCACGTGCTGCCCTGGGC...CAAGGGGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR GCA 90 bp | CCCAGACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTTGTTCCAGGGGTTGTTaGAGTACGCCCAGGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PRQGVMGQASTCPPPSLRCSRGC*STPRAA Trigger: TGCTGCCCTGGGCGTACTGCAACAACCCCTGGAACA...ACGGAGACTGGGAGGCGGACAGGTGGAGGCCTGCCCCATCACACCCTGTCTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 |
||
| CDS-3UTR GCA 90 bp | CACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCCAGGCCCATGGTCTaGCACCCGAGACACATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HLSASQSPWWEQGLGGVSPRPMV*HPRHIH Trigger: GTGGATGTGTCTCGGGTGGCAGACCATGGGCCTGGG...AGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR GCA 90 bp | TCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCCCTTCCCAGGCCCATGGTCTaGCACCCGAGACACATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SASQSPWWEQGLGGVSPLPRPMV*HPRHIH Trigger: GTGGATGTGTCTCGGGTGGCAGACCATGGGCCTGGG...AAGGGGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR GCA 90 bp | CCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCGTGTGTCCCCATCTGTaGGGCAGAGCTGGAACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: PPVRLPVSVVGARVGWGFVCPHL*GRAGTA Trigger: CGCTGTTCCAGCTCTGCCGCACAGATGGGGACACAC...GAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR GCA 90 bp | CCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTGGGCCTTGTCCGGGTaGAGTGGCTGGACCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PPVRLPVSVVGARVGWGFWALSG*SGWTSN Trigger: GTTTGAGGTCCAGCCACTGCACCCGGACAAGGCCCA...GAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR GCA 90 bp | CCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCCCTTGTGGGCCTTGTCCGGGTaGAGTGGCTGGACCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PPPSLRGGSKGWVGFLPLWALSG*SGWTSN Trigger: GTTTGAGGTCCAGCCACTGCACCCGGACAAGGCCCA...CAAGGGGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CCA 90 bp | CCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCGGTTCTGGTCCTTCTTaGTGGCCTCGCTGGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PVRLPVSVVGARVGWGFSGSGPS*WPRWAQ Trigger: CTGTGCCCAGCGAGGCCACCAAGAAGGACCAGAACC...GGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 |
||
| CDS-3UTR CCA 90 bp | CCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCCCCCGTGTGAGGTTCTaGTCCTTCTTGGTGGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PPVRLPVSVVGARVGWGFPRVRF*SFLVAS Trigger: CGAGGCCACCAAGAAGGACCAGAACCTCACACGGGG...GAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 |
||
| CDS-3UTR CCA 90 bp | GGCAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGACTCCTCGCTGGGGCTaGTCCTTTGCAAGGTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GRPPPVRLPVSVVGARVGTPRWG*SFARCS Trigger: ACTACACCTTGCAAAGGACCAGCCCCAGCGAGGAGT...CCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCCTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGACTCCTCGCTGGGGCTaGTCCTTTGCAAGGTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GLHLSASQSPWWEQGLGGTPRWG*SFARCS Trigger: ACTACACCTTGCAAAGGACCAGCCCCAGCGAGGAGT...CCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGGCCACAGCCCAGCCTaGGTACTGGTAGTGGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TGCDGAGLHLSASQSPWWGHSPA*VLVVVV Trigger: TACAACCACTACCAGTACCCAGGCTGGGCTGTGGCC...CCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCCTGCCCCATCACACCCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
||
| CDS-3UTR CCA 90 bp | CCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTGGCCACAGCCCAGCCTaGGTACTGGTAGTGGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PPPVRLPVSVVGARVGWGGHSPA*VLVVVV Trigger: TACAACCACTACCAGTACCCAGGCTGGGCTGTGGCC...ACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCCTCTGTGCGGCAGAGCTaGAACAGCGCGTACAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSASQSPWWEQGLGGVSPSVRQS*NSAYSG Trigger: CCCACTGTACGCGCTGTTCCAGCTCTGCCGCACAGA...GGGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CCA 90 bp | CCATCCCAGACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCCAGTCTCTTGTCCGGGTGCAGTaGCTGGACCTCAAACCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: PSQTGCDGAGLHLSASQSLVRVQ*LDLKPV Trigger: GACGGGTTTGAGGTCCAGCCACTGCACCCGGACAAG...AGACTGGGAGGCGGACAGGTGGAGGCCTGCCCCATCACACCCTGTCTGGGATGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
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| CDS-3UTR CCA 90 bp | CTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTCTTGTCCGGGTGCAGTaGCTGGACCTCAAACCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LHLSASQSPWWEQGLGGVLVRVQ*LDLKPV Trigger: GACGGGTTTGAGGTCCAGCCACTGCACCCGGACAAG...AACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
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| CDS-3UTR CCA 90 bp | CCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCAGTCCTGGAAGCGGCTaGAGCCGTTACTGCCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: PVRLPVSVVGARVGWGFSSPGSG*SRYCPR Trigger: TCGTGGGCAGTAACGGCTCCAGCCGCTTCCAGGACT...GGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR TCA 90 bp | TCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCCCAGTTGCCCCGTGTaGGGTTCTGGTCCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: STCPPPSLRGGSKGWVGFPSCPV*GSGPSW Trigger: CCAAGAAGGACCAGAACCTCACACGGGGCAACTGGG...AAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 |
||
| CDS-3UTR TCA 90 bp | CTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTACATCCACACCCAGGTaGTTGGCCATGAAGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LHLSASQSPWWEQGLGGVTSTPR*LAMKPR Trigger: CCTGGGCTTCATGGCCAATCACCTGGGTGTGGATGT...AACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR TCA 90 bp | CCATCCCAGACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCCAGTCTACATCCACACCCAGGTaGTTGGCCATGAAGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSQTGCDGAGLHLSASQSTSTPR*LAMKPR Trigger: CCTGGGCTTCATGGCCAATCACCTGGGTGTGGATGT...AGACTGGGAGGCGGACAGGTGGAGGCCTGCCCCATCACACCCTGTCTGGGATGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
||
| CDS-3UTR TCA 90 bp | CTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCCACATCCACACCCAGGTaGTTGGCCATGAAGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSASQSPWWEQGLGGVSPTSTPR*LAMKPR Trigger: CCTGGGCTTCATGGCCAATCACCTGGGTGTGGATGT...GGGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR TCA 90 bp | CTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCCCATCCACAATGGCAGTaGCCAGGGTCTCTAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSASQSPWWEQGLGGVSPHPQWQ*PGSLGG Trigger: GCCTCCTAGAGACCCTGGTCACTGCCATTGTGGATG...GGGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR GCA 90 bp | CCATCCCAGACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCCAGTCTCAGGCAGCCCTGGCTTaGAAACTGGCCGAAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PSQTGCDGAGLHLSASQSQAALA*KLAEGK Trigger: CTTTCCTTCGGCCAGTTTGCAAGCCAGGGCTGCCTG...AGACTGGGAGGCGGACAGGTGGAGGCCTGCCCCATCACACCCTGTCTGGGATGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 |
||
| CDS-3UTR GCA 90 bp | ACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCGCCCAGGGCAGCACGTaGGTCATGGACGAGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TCPPPSLRGGSKGWVGFLAQGST*VMDEKK Trigger: CTTCTTCTCGTCCATGACGCACGTGCTGCCCTGGGC...GAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGATGAGGCCACCCCATaGACAGCCCAGGGAATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TGCDGAGLHLSASQSPWWDEATP*TAQGIE Trigger: TTCTATTCCCTGGGCTGTGCATGGGGTGGCCTCATC...CCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCCTGCCCCATCACACCCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
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| CDS-3UTR CCA 90 bp | CAGCAGCCATCCCAGACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCTCTTGGTGGCCTCGCTaGGCACAGCACCATTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: QQPSQTGCDGAGLHLSASSWWPR*AQHHST Trigger: TGTTGAATGGTGCTGTGCCCAGCGAGGCCACCAAGA...GGAGGCGGACAGGTGGAGGCCTGCCCCATCACACCCTGTCTGGGATGGCTGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 |
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| CDS-3UTR CCA 90 bp | ACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCGGTTCTGGTCCTTCTTaGTGGCCTCGCTGGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: TCPPPSLRGGSKGWVGFLGSGPS*WPRWAQ Trigger: CTGTGCCCAGCGAGGCCACCAAGAAGGACCAGAACC...GAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 |
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| CDS-3UTR CCA 90 bp | TCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCCCTTGGTTCTGGTCCTTCTTaGTGGCCTCGCTGGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SASQSPWWEQGLGGVSPLGSGPS*WPRWAQ Trigger: CTGTGCCCAGCGAGGCCACCAAGAAGGACCAGAACC...AAGGGGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 |
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| CDS-3UTR CCA 90 bp | GGGTCTGTTCTGGGGTCAGGAACACTGGTCACGAGGCTGAGGGGAACCGGTGGGCCCCGTGTGAGGTTCTaGTCCTTCTTGGTGGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GSVLGSGTLVTRLRGTGGPRVRF*SFLVAS Trigger: CGAGGCCACCAAGAAGGACCAGAACCTCACACGGGG...CCCACCGGTTCCCCTCAGCCTCGTGACCAGTGTTCCTGACCCCAGAACAGACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 |
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| CDS-3UTR CCA 90 bp | TCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCCCCGTGTGAGGTTCTaGTCCTTCTTGGTGGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: STCPPPSLRGGSKGWVGFPRVRF*SFLVAS Trigger: CGAGGCCACCAAGAAGGACCAGAACCTCACACGGGG...AAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 |
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| CDS-3UTR CCA 90 bp | CAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGAAGCGCCAACAGATCTaGAAGAAGAGAGGCGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QASTCPPPSLRGGSKGWVKRQQI*KKRGGG Trigger: TCCCCCGCCTCTCTTCTTCCAGATCTGTTGGCGCTT...CACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
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| CDS-3UTR CCA 90 bp | TCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTTCTGTGCGGCAGAGCTaGAACAGCGCGTACAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: STCPPPSLRGGSKGWVGFSVRQS*NSAYSG Trigger: CCCACTGTACGCGCTGTTCCAGCTCTGCCGCACAGA...AAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
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| CDS-3UTR CCA 90 bp | TGGCAGGCCTCCTCCAAAGTGCTTTGGACACTGCTTCCCCATGCCCGCTCCCCCTCCGGGTGCAGTGGCTaGACCTCAAACCCGTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: WQASSKVLWTLLPHARSPSGCSG*TSNPSS Trigger: CGAAGACGGGTTTGAGGTCCAGCCACTGCACCCGGA...GGGGGAGCGGGCATGGGGAAGCAGTGTCCAAAGCACTTTGGAGGAGGCCTGCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
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| CDS-3UTR CCA 90 bp | CACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTTCCGGGTGCAGTGGCTaGACCTCAAACCCGTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: HLSASQSPWWEQGLGGVSSGCSG*TSNPSS Trigger: CGAAGACGGGTTTGAGGTCCAGCCACTGCACCCGGA...AGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
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| CDS-3UTR CCA 90 bp | TCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCCCTTCTTGTCCGGGTGCAGTaGCTGGACCTCAAACCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: SASQSPWWEQGLGGVSPLLVRVQ*LDLKPV Trigger: GACGGGTTTGAGGTCCAGCCACTGCACCCGGACAAG...AAGGGGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
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| CDS-3UTR CCA 90 bp | CTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCCCGTTACTGCCCACGATaGGAATCTGGGCCTTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LSASQSPWWEQGLGGVSPRYCPR*ESGPCP Trigger: CGGACAAGGCCCAGATTCCCATCGTGGGCAGTAACG...GGGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
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| CDS-3UTR CCA 90 bp | CAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGTCTTGGTGGCCTCGCTaGGCACAGCACCATTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QASTCPPPSLRGGSKGWVSWWPR*AQHHSV Trigger: AACAGAATGGTGCTGTGCCCAGCGAGGCCACCAAGA...CACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163288.2 |
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| CDS-3UTR TCA 90 bp | AGCAGCCATCCCAGACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCCGGTAGTGGTTGTAGGTaGTTGGCCGGTACTGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: SSHPRQGVMGQASTCPPPGSGCR*LAGTGS Trigger: TGATCCAGTACCGGCCAATCACCTACAACCACTACC...GGGAGGCGGACAGGTGGAGGCCTGCCCCATCACACCCTGTCTGGGATGGCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
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| CDS-3UTR TCA 90 bp | ACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGGTAGTGGTTGTAGGTaGTTGGCCGGTACTGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: TGCDGAGLHLSASQSPWWGSGCR*LAGTGS Trigger: TGATCCAGTACCGGCCAATCACCTACAACCACTACC...CCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCCTGCCCCATCACACCCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
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| CDS-3UTR GCA 90 bp | TGGCAGGCCTCCTCCAAAGTGCTTTGGACACTGCTTCCCCATGCCCGCTCCCCCCAGGCAGCCCTGGCTTaGAAACTGGCCGAAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: WQASSKVLWTLLPHARSPQAALA*KLAEGK Trigger: CTTTCCTTCGGCCAGTTTGCAAGCCAGGGCTGCCTG...GGGGGAGCGGGCATGGGGAAGCAGTGTCCAAAGCACTTTGGAGGAGGCCTGCCA 62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 |
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| CDS-3UTR GCA 90 bp | TCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCCCTTTGTTCCAGGGGTTGTTaGAGTACGCCCAGGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SASQSPWWEQGLGGVSPLCSRGC*STPRAA Trigger: TGCTGCCCTGGGCGTACTGCAACAACCCCTGGAACA...AAGGGGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR GCA 90 bp | CTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCCGATGAGGCCACCCCATaGACAGCCCAGGGAATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSASQSPWWEQGLGGVSPDEATP*TAQGIE Trigger: TTCTATTCCCTGGGCTGTGCATGGGGTGGCCTCATC...GGGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGGCAGCACGTGCGTCATaGACGAGAAGAAGTAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GRPPPVRLPVSVVGARVGAARAS*TRRSSR Trigger: TCTACTACTTCTTCTCGTCCATGACGCACGTGCTGC...CCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CCA 90 bp | TCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTTCCAGTACTCCTCGCTaGGGCTGGTCCTTTGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: STCPPPSLRGGSKGWVGFSSTPR*GWSFAR Trigger: CCTTGCAAAGGACCAGCCCCAGCGAGGAGTACTGGA...AAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CCA 90 bp | TCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCCCTTTCCAGTACTCCTCGCTaGGGCTGGTCCTTTGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SASQSPWWEQGLGGVSPLSSTPR*GWSFAR Trigger: CCTTGCAAAGGACCAGCCCCAGCGAGGAGTACTGGA...AAGGGGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CCA 90 bp | CCATCCCAGACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCCAGTCTAAGCGCCAACAGATCTaGAAGAAGAGAGGCGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSQTGCDGAGLHLSASQSKRQQI*KKRGGG Trigger: TCCCCCGCCTCTCTTCTTCCAGATCTGTTGGCGCTT...AGACTGGGAGGCGGACAGGTGGAGGCCTGCCCCATCACACCCTGTCTGGGATGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
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| CDS-3UTR CCA 90 bp | CCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCAAGCGCCAACAGATCTaGAAGAAGAGAGGCGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PPVRLPVSVVGARVGWGFKRQQI*KKRGGG Trigger: TCCCCCGCCTCTCTTCTTCCAGATCTGTTGGCGCTT...GAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAGCCATCCCAGACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCGAACAGCGCGTACAGTaGGATGCAGATGACAGACGA | + |
|
Preference number: 4 (lower is better) Translates to: QQPSQTGCDGAGLHLSASEQRVQ*DADDRR Trigger: TCGTCTGTCATCTGCATCCCACTGTACGCGCTGTTC...GGAGGCGGACAGGTGGAGGCCTGCCCCATCACACCCTGTCTGGGATGGCTGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
||
| CDS-3UTR CCA 90 bp | CCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTGAACAGCGCGTACAGTaGGATGCAGATGACAGACGA | + |
|
Preference number: 4 (lower is better) Translates to: PPPVRLPVSVVGARVGWGEQRVQ*DADDRR Trigger: TCGTCTGTCATCTGCATCCCACTGTACGCGCTGTTC...ACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CCA 90 bp | TCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCCCTTCGTTACTGCCCACGATaGGAATCTGGGCCTTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SASQSPWWEQGLGGVSPLRYCPR*ESGPCP Trigger: CGGACAAGGCCCAGATTCCCATCGTGGGCAGTAACG...AAGGGGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CCA 90 bp | ACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCATATCCGGGAGTCCTaGAAGCGGCTGGAGCCGTTA | + |
|
Preference number: 4 (lower is better) Translates to: TCPPPSLRGGSKGWVGFLHIRES*KRLEPL Trigger: TAACGGCTCCAGCCGCTTCCAGGACTCCCGGATATG...GAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| 3UTR CAA 72 bp | CTGGAGCCGTTACTGCCCACGATGGGAATCTGGGCCTaGTCCGGGTGCAGTGGCTGGACCTCAAACCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LEPLLPTMGIWA*SGCSGWTSNPS Trigger: AGACGGGTTTGAGGTCCAGCCACTGCACCCGGACAAGGCCCAGATTCCCATCGTGGGCAGTAACGGCTCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| 3UTR CAA 72 bp | CTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTaGGGTGGGGTTTCTCCCCTTGCAACAATTGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSASQSPWWEQG*GGVSPLATIAL Trigger: GAGCGCAATTGTTGCAAGGGGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| CDS-3UTR TCA 90 bp | GTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCCCTGGTAGTGGTTGTAGGTaGTTGGCCGGTACTGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: VRLPVSVVGARVGWGFSPGSGCR*LAGTGS Trigger: TGATCCAGTACCGGCCAATCACCTACAACCACTACC...AGGGGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR GCA 90 bp | CCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTCAAGGAGAAGCTGGCTaGATAGTTGTCCATCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PPPVRLPVSVVGARVGWGQGEAG*IVVHQQ Trigger: CTGCTGATGGACAACTATGCAGCCAGCTTCTCCTTG...ACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTAGGGTCTGTTCTGGGGTCAGGAACACTGGTCACGAGGCTGAGGGGAACCGTGTGTCCCCATCTGTaGGGCAGAGCTGGAACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RLGSVLGSGTLVTRLRGTVCPHL*GRAGTA Trigger: CGCTGTTCCAGCTCTGCCGCACAGATGGGGACACAC...GGTTCCCCTCAGCCTCGTGACCAGTGTTCCTGACCCCAGAACAGACCCTAGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
||
| CDS-3UTR GCA 90 bp | GGGGACATGAGCAGTGGTGGTCAAGGTGACAGCAGCCATCCCAGACAGGGTGTGTGGGCCTTGTCCGGGTaGAGTGGCTGGACCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GDMSSGGQGDSSHPRQGVWALSG*SGWTSN Trigger: GTTTGAGGTCCAGCCACTGCACCCGGACAAGGCCCA...CACACCCTGTCTGGGATGGCTGCTGTCACCTTGACCACCACTGCTCATGTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
||
| CDS-3UTR CCA 90 bp | ACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCTCTTGGTGGCCTCGCTaGGCACAGCACCATTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: TCPPPSLRGGSKGWVGFLSWWPR*AQHHST Trigger: TGTTGAATGGTGCTGTGCCCAGCGAGGCCACCAAGA...GAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 |
||
| CDS-3UTR CCA 90 bp | CCATCCCAGACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCCAGTCTAGTACAAACTCGATCTaGTTGCCCCAGTTGCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: PSQTGCDGAGLHLSASQSSTNSI*LPQLPR Trigger: ACGGGGCAACTGGGGCAACCAGATCGAGTTTGTACT...AGACTGGGAGGCGGACAGGTGGAGGCCTGCCCCATCACACCCTGTCTGGGATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGCAGCACGTGCGTCATaGACGAGAAGAAGTAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: QASTCPPPSLRGGSKGWVAARAS*TRRSSR Trigger: TCTACTACTTCTTCTCGTCCATGACGCACGTGCTGC...CACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CCA 90 bp | CCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCGTGGTTGTAGGTGATTaGCCGGTACTGGATCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: PVRLPVSVVGARVGWGFSVVVGD*PVLDHR Trigger: ACGGTGATCCAGTACCGGCCAATCACCTACAACCAC...GGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGCCTCCGACCTGGTGGAGGGTGGGCAAGGGAATGTGGAACAGGGTCCCCTGTGGTTGTAGGTGATTaGCCGGTACTGGATCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: LGLRPGGGWARECGTGSPVVVGD*PVLDHR Trigger: ACGGTGATCCAGTACCGGCCAATCACCTACAACCAC...AGGGGACCCTGTTCCACATTCCCTTGCCCACCCTCCACCAGGTCGGAGGCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
||
| 3UTR CAA 72 bp | TGCACACACTGGGCAGCGGCGGGCGGCACACCGTTATaGCTACAGAGGATTAGAAGTGGCTTGGCCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CTHWAAAGGTPL*LQRIRSGLARA Trigger: AGCCCTGGCCAAGCCACTTCTAATCCTCTGTAGCAATAACGGTGTGCCGCCCGCCGCTGCCCAGTGTGTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
||
| CDS-3UTR TCA 90 bp | AGCCATCCCAGACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCCAGTAGAAGGCGATGCAGATaGCCACGTTGTAGTAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: SHPRQGVMGQASTCPPPSRRRCR*PRCSRC Trigger: GCATCTACTACAACGTGGTCATCTGCATCGCCTTCT...ACTGGGAGGCGGACAGGTGGAGGCCTGCCCCATCACACCCTGTCTGGGATGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 |
||
| CDS-3UTR TCA 90 bp | TCCCAGACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGGTTTCCAATGTCGTCTaGCAGCTTCAGCACATACAG | + |
|
Preference number: 4 (lower is better) Translates to: SQTGCDGAGLHLSASQSPVSNVV*QLQHIQ Trigger: CTGTATGTGCTGAAGCTGTCAGACGACATTGGAAAC...CGGAGACTGGGAGGCGGACAGGTGGAGGCCTGCCCCATCACACCCTGTCTGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
||
| CDS-3UTR TCA 90 bp | CACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTGGTAGTGGTTGTAGGTaGTTGGCCGGTACTGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: HLSASQSPWWEQGLGGVSGSGCR*LAGTGS Trigger: TGATCCAGTACCGGCCAATCACCTACAACCACTACC...AGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGGCTAGGGTCTGTTCTGGGGTCAGGAACACTGGTCACGAGGCTGAGGGGATGTTCCAGGGGTTGTTaGAGTACGCCCAGGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QRLGSVLGSGTLVTRLRGCSRGC*STPRAA Trigger: TGCTGCCCTGGGCGTACTGCAACAACCCCTGGAACA...TCCCCTCAGCCTCGTGACCAGTGTTCCTGACCCCAGAACAGACCCTAGCCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 |
||
| CDS-3UTR GCA 90 bp | GTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCCCTCAAGGAGAAGCTGGCTaGATAGTTGTCCATCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VRLPVSVVGARVGWGFSPQGEAG*IVVHQQ Trigger: CTGCTGATGGACAACTATGCAGCCAGCTTCTCCTTG...AGGGGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CCA 90 bp | GGGTCTGTTCTGGGGTCAGGAACACTGGTCACGAGGCTGAGGGGAACCGGTGGGAGTACAAACTCGATCTaGTTGCCCCAGTTGCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GSVLGSGTLVTRLRGTGGSTNSI*LPQLPR Trigger: ACGGGGCAACTGGGGCAACCAGATCGAGTTTGTACT...CCCACCGGTTCCCCTCAGCCTCGTGACCAGTGTTCCTGACCCCAGAACAGACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
||
| CDS-3UTR CCA 90 bp | CTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCCGCAGCACGTGCGTCATaGACGAGAAGAAGTAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSASQSPWWEQGLGGVSPAARAS*TRRSSR Trigger: TCTACTACTTCTTCTCGTCCATGACGCACGTGCTGC...GGGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGCACGAACAAACAGAATaGTCAGCACCACATAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QASTCPPPSLRGGSKGWVHEQTE*SAPHRG Trigger: TCCCCTATGTGGTGCTGACCATTCTGTTTGTTCGTG...CACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CCA 90 bp | ACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCGTGGTTGTAGGTGATTaGCCGGTACTGGATCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: TCPPPSLRGGSKGWVGFLVVVGD*PVLDHR Trigger: ACGGTGATCCAGTACCGGCCAATCACCTACAACCAC...GAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CCA 90 bp | CACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTGTGGTTGTAGGTGATTaGCCGGTACTGGATCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: HLSASQSPWWEQGLGGVSVVVGD*PVLDHR Trigger: ACGGTGATCCAGTACCGGCCAATCACCTACAACCAC...AGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGCCCCAGTCTCTGCTTaGCTTTGTGGCATTTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: AGLHLSASQSPWWEQGLGAPVSA*LCGIFQ Trigger: TTGAAAAATGCCACAAAGCCAAGCAGAGACTGGGGC...ACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGCCCCAGTCTCTGCTTaGCTTTGTGGCATTTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QASTCPPPSLRGGSKGWVAPVSA*LCGIFQ Trigger: TTGAAAAATGCCACAAAGCCAAGCAGAGACTGGGGC...CACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CCA 90 bp | TCCATAAACAAGTGCTTTGGGCAGGCTGCTGGGTCGTGGGCCTTTGCTGGCTGGCTTGTCCGGGTGCAGTaGCTGGACCTCAAACCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: SINKCFGQAAGSWAFAGWLVRVQ*LDLKPV Trigger: GACGGGTTTGAGGTCCAGCCACTGCACCCGGACAAG...CCAGCCAGCAAAGGCCCACGACCCAGCAGCCTGCCCAAAGCACTTGTTTATGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
||
| CDS-3UTR CCA 90 bp | AGGCTAGGGTCTGTTCTGGGGTCAGGAACACTGGTCACGAGGCTGAGGGGAACCCGTTACTGCCCACGATaGGAATCTGGGCCTTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: RLGSVLGSGTLVTRLRGTRYCPR*ESGPCP Trigger: CGGACAAGGCCCAGATTCCCATCGTGGGCAGTAACG...GGTTCCCCTCAGCCTCGTGACCAGTGTTCCTGACCCCAGAACAGACCCTAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
||
| CDS-3UTR CCA 90 bp | CAGAGGCTAGGGTCTGTTCTGGGGTCAGGAACACTGGTCACGAGGCTGAGGGGACATATCCGGGAGTCCTaGAAGCGGCTGGAGCCGTTA | + |
|
Preference number: 4 (lower is better) Translates to: QRLGSVLGSGTLVTRLRGHIRES*KRLEPL Trigger: TAACGGCTCCAGCCGCTTCCAGGACTCCCGGATATG...TCCCCTCAGCCTCGTGACCAGTGTTCCTGACCCCAGAACAGACCCTAGCCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
||
| 3UTR CAA 72 bp | GGGGGACGGGCACATGGACTGAGGCCATTTGGCACATaGAATGGGGTTAGCACGTCTGGGAAGACTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GGRAHGLRPFGT*NGVSTSGKTGP Trigger: AGGCCCAGTCTTCCCAGACGTGCTAACCCCATTCAATGTGCCAAATGGCCTCAGTCCATGTGCCCGTCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
||
| CDS-3UTR TCA 90 bp | TCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTAGAAGGCGATGCAGATaGCCACGTTGTAGTAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: STCPPPSLRGGSKGWVGFRRRCR*PRCSRC Trigger: GCATCTACTACAACGTGGTCATCTGCATCGCCTTCT...AAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR TCA 90 bp | CTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTGTTTCCAATGTCGTCTaGCAGCTTCAGCACATACAG | + |
|
Preference number: 4 (lower is better) Translates to: LHLSASQSPWWEQGLGGVVSNVV*QLQHIQ Trigger: CTGTATGTGCTGAAGCTGTCAGACGACATTGGAAAC...AACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR GCA 90 bp | TTCTGCACACACTGGGCAGCGGCGGGCGGCACACCGTTATTGCTACAGAGGATTTGTTCCAGGGGTTGTTaGAGTACGCCCAGGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FCTHWAAAGGTPLLLQRICSRGC*STPRAA Trigger: TGCTGCCCTGGGCGTACTGCAACAACCCCTGGAACA...AATCCTCTGTAGCAATAACGGTGTGCCGCCCGCCGCTGCCCAGTGTGTGCAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
||
| CDS-3UTR GCA 90 bp | ACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCAAGGAGAAGCTGGCTaGATAGTTGTCCATCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TCPPPSLRGGSKGWVGFLQGEAG*IVVHQQ Trigger: CTGCTGATGGACAACTATGCAGCCAGCTTCTCCTTG...GAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CCA 90 bp | ACTGGTCACGAGGCTGAGGGGAACCGGTGGGATGTGGACACAGAACCTCTTATCGGTTCTGGTCCTTCTTaGTGGCCTCGCTGGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: TGHEAEGNRWDVDTEPLIGSGPS*WPRWAQ Trigger: CTGTGCCCAGCGAGGCCACCAAGAAGGACCAGAACC...GATAAGAGGTTCTGTGTCCACATCCCACCGGTTCCCCTCAGCCTCGTGACCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGCCTGACAACCAGGGTTGGAACAAAGGATAGAGACCCTGGAGCAGCCAAGCCCCGTGTGAGGTTCTaGTCCTTCTTGGTGGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LGLTTRVGTKDRDPGAAKPRVRF*SFLVAS Trigger: CGAGGCCACCAAGAAGGACCAGAACCTCACACGGGG...CTTGGCTGCTCCAGGGTCTCTATCCTTTGTTCCAACCCTGGTTGTCAGGCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
||
| CDS-3UTR CCA 90 bp | TCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTGCAGCACGTGCGTCATaGACGAGAAGAAGTAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: STCPPPSLRGGSKGWVGFAARAS*TRRSSR Trigger: TCTACTACTTCTTCTCGTCCATGACGCACGTGCTGC...AAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CCA 90 bp | TGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCCCCACGAACAAACAGAATaGTCAGCACCACATAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CPPPSLRGGSKGWVGFLPHEQTE*SAPHRG Trigger: TCCCCTATGTGGTGCTGACCATTCTGTTTGTTCGTG...GGGGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CCA 90 bp | CCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCCACGAACAAACAGAATaGTCAGCACCACATAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PPVRLPVSVVGARVGWGFHEQTE*SAPHRG Trigger: TCCCCTATGTGGTGCTGACCATTCTGTTTGTTCGTG...GAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGATCTTGTCCCATTGTaGGGTCAGGTAGTACATGAT | + |
|
Preference number: 4 (lower is better) Translates to: AGLHLSASQSPWWEQGLGDLVPL*GQVVHD Trigger: ATCATGTACTACCTGACCCCACAATGGGACAAGATC...ACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGATCTTGTCCCATTGTaGGGTCAGGTAGTACATGAT | + |
|
Preference number: 4 (lower is better) Translates to: RPPPVRLPVSVVGARVGWDLVPL*GQVVHD Trigger: ATCATGTACTACCTGACCCCACAATGGGACAAGATC...CCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CCA 90 bp | CCATCCCAGACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCCAGTCTCAACCAAGGAGAAGCTaGCTGCATAGTTGTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: PSQTGCDGAGLHLSASQSQPRRS*LHSCPS Trigger: TGATGGACAACTATGCAGCCAGCTTCTCCTTGGTTG...AGACTGGGAGGCGGACAGGTGGAGGCCTGCCCCATCACACCCTGTCTGGGATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
||
| CDS-3UTR CCA 90 bp | CCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCGCCCCAGTCTCTGCTTaGCTTTGTGGCATTTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PVRLPVSVVGARVGWGFSAPVSA*LCGIFQ Trigger: TTGAAAAATGCCACAAAGCCAAGCAGAGACTGGGGC...GGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGCCTGACAACCAGGGTTGGAACAAAGGATAGAGACCCTGGAGCAGCCAAGCCCACGATGGGAATCTaGGCCTTGTCCGGGTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGLTTRVGTKDRDPGAAKPTMGI*ALSGCS Trigger: ACTGCACCCGGACAAGGCCCAGATTCCCATCGTGGG...CTTGGCTGCTCCAGGGTCTCTATCCTTTGTTCCAACCCTGGTTGTCAGGCCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
||
| CDS-3UTR TCA 90 bp | GGGGACATGAGCAGTGGTGGTCAAGGTGACAGCAGCCATCCCAGACAGGGTGTGCGAAGGAAAGCTCCATaGAGAAGAGAGGAATCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GDMSSGGQGDSSHPRQGVRRKAP*RREESR Trigger: GCGGGATTCCTCTCTTCTTCATGGAGCTTTCCTTCG...CACACCCTGTCTGGGATGGCTGCTGTCACCTTGACCACCACTGCTCATGTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 |
||
| CDS-3UTR TCA 90 bp | GAGTCCTGGAAGCGGCTGGAGCCGTTACTGCCCACGATGGGAATCTGGGCCTTGAGAAGGCGATGCAGATaGCCACGTTGTAGTAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: ESWKRLEPLLPTMGIWALRRRCR*PRCSRC Trigger: GCATCTACTACAACGTGGTCATCTGCATCGCCTTCT...CAAGGCCCAGATTCCCATCGTGGGCAGTAACGGCTCCAGCCGCTTCCAGGACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| CDS-3UTR TCA 90 bp | TCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTGTTTCCAATGTCGTCTaGCAGCTTCAGCACATACAG | + |
|
Preference number: 4 (lower is better) Translates to: STCPPPSLRGGSKGWVGFVSNVV*QLQHIQ Trigger: CTGTATGTGCTGAAGCTGTCAGACGACATTGGAAAC...AAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR TCA 90 bp | CCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCGCATTTTTCAAACGCTaGAGAAGTGTGTCCCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PVRLPVSVVGARVGWGFSAFFKR*RSVSPS Trigger: AGATGGGGACACACTTCTTCAGCGTTTGAAAAATGC...GGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR TCA 90 bp | TGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCCCGCATTTTTCAAACGCTaGAGAAGTGTGTCCCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: CPPPSLRGGSKGWVGFLPAFFKR*RSVSPS Trigger: AGATGGGGACACACTTCTTCAGCGTTTGAAAAATGC...GGGGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR GCA 90 bp | ACTGGTCACGAGGCTGAGGGGAACCGGTGGGATGTGGACACAGAACCTCTTATCCAGGCAGCCCTGGCTTaGAAACTGGCCGAAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TGHEAEGNRWDVDTEPLIQAALA*KLAEGK Trigger: CTTTCCTTCGGCCAGTTTGCAAGCCAGGGCTGCCTG...GATAAGAGGTTCTGTGTCCACATCCCACCGGTTCCCCTCAGCCTCGTGACCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 |
||
| CDS-3UTR GCA 90 bp | TGTGTAAACACTGGGGACATGAGCAGTGGTGGTCAAGGTGACAGCAGCCATCCCGCCCAGGGCAGCACGTaGGTCATGGACGAGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CVNTGDMSSGGQGDSSHPAQGST*VMDEKK Trigger: CTTCTTCTCGTCCATGACGCACGTGCTGCCCTGGGC...GGGATGGCTGCTGTCACCTTGACCACCACTGCTCATGTCCCCAGTGTTTACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 |
||
| CDS-3UTR CCA 90 bp | CAGCAGCCATCCCAGACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCAGATGCCAATGTATGTaGACACCACCATCATACCAT | + |
|
Preference number: 4 (lower is better) Translates to: QQPSQTGCDGAGLHLSASRCQCM*TPPSYH Trigger: ATGGTATGATGGTGGTGTCCACATACATTGGCATCT...GGAGGCGGACAGGTGGAGGCCTGCCCCATCACACCCTGTCTGGGATGGCTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 |
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| CDS-3UTR CCA 90 bp | ACTGGTCACGAGGCTGAGGGGAACCGGTGGGATGTGGACACAGAACCTCTTATCTCCAGTACTCCTCGCTaGGGCTGGTCCTTTGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TGHEAEGNRWDVDTEPLISSTPR*GWSFAR Trigger: CCTTGCAAAGGACCAGCCCCAGCGAGGAGTACTGGA...GATAAGAGGTTCTGTGTCCACATCCCACCGGTTCCCCTCAGCCTCGTGACCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
||
| CDS-3UTR CCA 90 bp | TCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCACGAACAAACAGAATaGTCAGCACCACATAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: STCPPPSLRGGSKGWVGFHEQTE*SAPHRG Trigger: TCCCCTATGTGGTGCTGACCATTCTGTTTGTTCGTG...AAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CCA 90 bp | TCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCCCTTCAACCAAGGAGAAGCTaGCTGCATAGTTGTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SASQSPWWEQGLGGVSPLQPRRS*LHSCPS Trigger: TGATGGACAACTATGCAGCCAGCTTCTCCTTGGTTG...AAGGGGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTAAACACTGGGGACATGAGCAGTGGTGGTCAAGGTGACAGCAGCCATCCCCCCACGATGGGAATCTaGGCCTTGTCCGGGTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: CVNTGDMSSGGQGDSSHPPTMGI*ALSGCS Trigger: ACTGCACCCGGACAAGGCCCAGATTCCCATCGTGGG...GGGATGGCTGCTGTCACCTTGACCACCACTGCTCATGTCCCCAGTGTTTACACA 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGCCTGACAACCAGGGTTGGAACAAAGGATAGAGACCCTGGAGCAGCCAAGCGTTACTGCCCACGATaGGAATCTGGGCCTTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LGLTTRVGTKDRDPGAAKRYCPR*ESGPCP Trigger: CGGACAAGGCCCAGATTCCCATCGTGGGCAGTAACG...CTTGGCTGCTCCAGGGTCTCTATCCTTTGTTCCAACCCTGGTTGTCAGGCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
||
| CDS-3UTR CCA 90 bp | TGTGTAAACACTGGGGACATGAGCAGTGGTGGTCAAGGTGACAGCAGCCATCCCAGTCCTGGAAGCGGCTaGAGCCGTTACTGCCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: CVNTGDMSSGGQGDSSHPSPGSG*SRYCPR Trigger: TCGTGGGCAGTAACGGCTCCAGCCGCTTCCAGGACT...GGGATGGCTGCTGTCACCTTGACCACCACTGCTCATGTCCCCAGTGTTTACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
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| 3UTR CAA 72 bp | CGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCCCTaGCAACAATTGCGCTCATATCCGGGAGTCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RGGSKGWVGFLP*QQLRSYPGVLE Trigger: TTCCAGGACTCCCGGATATGAGCGCAATTGTTGCAAGGGGAGAAACCCCACCCAACCCTTGCTCCCACCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| CDS-3UTR GCA 90 bp | CCCCCAGCTGCTGTCTTGGCATCCAAAGGATGTGTAAACACTGGGGACATGAGCAGGCTCCTCCCCCGTTaGGATAGCAGAGGTATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PPAAVLASKGCVNTGDMSRLLPR*DSRGMG Trigger: TCCCATACCTCTGCTATCGCAACGGGGGAGGAGCCT...GCTCATGTCCCCAGTGTTTACACATCCTTTGGATGCCAAGACAGCAGCTGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
||
| CDS-3UTR GCA 90 bp | GGATGTGTAAACACTGGGGACATGAGCAGTGGTGGTCAAGGTGACAGCAGCCATGTGTGTCCCCATCTGTaGGGCAGAGCTGGAACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: GCVNTGDMSSGGQGDSSHVCPHL*GRAGTA Trigger: CGCTGTTCCAGCTCTGCCGCACAGATGGGGACACAC...ATGGCTGCTGTCACCTTGACCACCACTGCTCATGTCCCCAGTGTTTACACATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
||
| CDS-3UTR CCA 90 bp | ACCCCCAGCTGCTGTCTTGGCATCCAAAGGATGTGTAAACACTGGGGACATGAGTCTGGTCCTTCTTGGTaGCCTCGCTGGGCACAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TPSCCLGIQRMCKHWGHESGPSW*PRWAQH Trigger: GTGCTGTGCCCAGCGAGGCCACCAAGAAGGACCAGA...CTCATGTCCCCAGTGTTTACACATCCTTTGGATGCCAAGACAGCAGCTGGGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 |
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| CDS-3UTR CCA 90 bp | AGCCATCCCAGACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCCAGTAGATGCCAATGTATGTaGACACCACCATCATACCAT | + |
|
Preference number: 4 (lower is better) Translates to: SHPRQGVMGQASTCPPPSRCQCM*TPPSYH Trigger: ATGGTATGATGGTGGTGTCCACATACATTGGCATCT...ACTGGGAGGCGGACAGGTGGAGGCCTGCCCCATCACACCCTGTCTGGGATGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 |
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| CDS-3UTR CCA 90 bp | TGTGTAAACACTGGGGACATGAGCAGTGGTGGTCAAGGTGACAGCAGCCATCCCTCCAGTACTCCTCGCTaGGGCTGGTCCTTTGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CVNTGDMSSGGQGDSSHPSSTPR*GWSFAR Trigger: CCTTGCAAAGGACCAGCCCCAGCGAGGAGTACTGGA...GGGATGGCTGCTGTCACCTTGACCACCACTGCTCATGTCCCCAGTGTTTACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
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| CDS-3UTR CCA 90 bp | GGGCCCTCACCTTGTCTGGAGGAGGAAGATACAGATTTTCCTGGGCAGAGGCTAGGCCACAGCCCAGCCTaGGTACTGGTAGTGGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GPSPCLEEEDTDFPGQRLGHSPA*VLVVVV Trigger: TACAACCACTACCAGTACCCAGGCTGGGCTGTGGCC...TAGCCTCTGCCCAGGAAAATCTGTATCTTCCTCCTCCAGACAAGGTGAGGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
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| CDS-3UTR CCA 90 bp | TTTCCCACCCCCAGCTGCTGTCTTGGCATCCAAAGGATGTGTAAACACTGGGGACCCACGATGGGAATCTaGGCCTTGTCCGGGTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FPTPSCCLGIQRMCKHWGPTMGI*ALSGCS Trigger: ACTGCACCCGGACAAGGCCCAGATTCCCATCGTGGG...TCCCCAGTGTTTACACATCCTTTGGATGCCAAGACAGCAGCTGGGGGTGGGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
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| 3UTR CAA 72 bp | AGGGCCTTGCATGTCCTGGACACGGCTGTGTCCCTGTaGCTCAGAGTGCAGTCTGGCATCCGGAATGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RALHVLDTAVSL*LRVQSGIRNED Trigger: ATCTTCATTCCGGATGCCAGACTGCACTCTGAGCAACAGGGACACAGCCGTGTCCAGGACATGCAAGGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
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| CDS-3UTR GCA 90 bp | CCCCCAGCTGCTGTCTTGGCATCCAAAGGATGTGTAAACACTGGGGACATGAGCGATGAGGCCACCCCATaGACAGCCCAGGGAATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PPAAVLASKGCVNTGDMSDEATP*TAQGIE Trigger: TTCTATTCCCTGGGCTGTGCATGGGGTGGCCTCATC...GCTCATGTCCCCAGTGTTTACACATCCTTTGGATGCCAAGACAGCAGCTGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
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| CDS-3UTR CCA 90 bp | CCCCCAGCTGCTGTCTTGGCATCCAAAGGATGTGTAAACACTGGGGACATGAGCACTCCTCGCTGGGGCTaGTCCTTTGCAAGGTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PPAAVLASKGCVNTGDMSTPRWG*SFARCS Trigger: ACTACACCTTGCAAAGGACCAGCCCCAGCGAGGAGT...GCTCATGTCCCCAGTGTTTACACATCCTTTGGATGCCAAGACAGCAGCTGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
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| CDS-3UTR CCA 90 bp | TGTGTAAACACTGGGGACATGAGCAGTGGTGGTCAAGGTGACAGCAGCCATCCCACTCCTCGCTGGGGCTaGTCCTTTGCAAGGTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: CVNTGDMSSGGQGDSSHPTPRWG*SFARCS Trigger: ACTACACCTTGCAAAGGACCAGCCCCAGCGAGGAGT...GGGATGGCTGCTGTCACCTTGACCACCACTGCTCATGTCCCCAGTGTTTACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
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| CDS-3UTR CCA 90 bp | ACTGGTCACGAGGCTGAGGGGAACCGGTGGGATGTGGACACAGAACCTCTTATCGAACAGCGCGTACAGTaGGATGCAGATGACAGACGA | + |
|
Preference number: 4 (lower is better) Translates to: TGHEAEGNRWDVDTEPLIEQRVQ*DADDRR Trigger: TCGTCTGTCATCTGCATCCCACTGTACGCGCTGTTC...GATAAGAGGTTCTGTGTCCACATCCCACCGGTTCCCCTCAGCCTCGTGACCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
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| CDS-3UTR CCA 90 bp | GCACACCGTTATTGCTACAGAGGATTAGAAGTGGCTTGGCCAGGGCTGTCACTGCATATCCGGGAGTCCTaGAAGCGGCTGGAGCCGTTA | + |
|
Preference number: 4 (lower is better) Translates to: AHRYCYRGLEVAWPGLSLHIRES*KRLEPL Trigger: TAACGGCTCCAGCCGCTTCCAGGACTCCCGGATATG...CAGTGACAGCCCTGGCCAAGCCACTTCTAATCCTCTGTAGCAATAACGGTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
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| CDS-3UTR TCA 90 bp | ACTGGTCACGAGGCTGAGGGGAACCGGTGGGATGTGGACACAGAACCTCTTATCAGAAGGCGATGCAGATaGCCACGTTGTAGTAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: TGHEAEGNRWDVDTEPLIRRRCR*PRCSRC Trigger: GCATCTACTACAACGTGGTCATCTGCATCGCCTTCT...GATAAGAGGTTCTGTGTCCACATCCCACCGGTTCCCCTCAGCCTCGTGACCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 |
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| CDS-3UTR GCA 90 bp | TCACCTTGTCTGGAGGAGGAAGATACAGATTTTCCTGGGCAGAGGCTAGGGTCTAGGCTCCTCCCCCGTTaGGATAGCAGAGGTATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SPCLEEEDTDFPGQRLGSRLLPR*DSRGMG Trigger: TCCCATACCTCTGCTATCGCAACGGGGGAGGAGCCT...AGACCCTAGCCTCTGCCCAGGAAAATCTGTATCTTCCTCCTCCAGACAAGGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
||
| CDS-3UTR GCA 90 bp | GCTGCTGTCTTGGCATCCAAAGGATGTGTAAACACTGGGGACATGAGCAGTGGTTGTTCCAGGGGTTGTTaGAGTACGCCCAGGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AAVLASKGCVNTGDMSSGCSRGC*STPRAA Trigger: TGCTGCCCTGGGCGTACTGCAACAACCCCTGGAACA...ACCACTGCTCATGTCCCCAGTGTTTACACATCCTTTGGATGCCAAGACAGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 |
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| CDS-3UTR GCA 90 bp | TTTCCCACCCCCAGCTGCTGTCTTGGCATCCAAAGGATGTGTAAACACTGGGGAGATGAGGCCACCCCATaGACAGCCCAGGGAATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FPTPSCCLGIQRMCKHWGDEATP*TAQGIE Trigger: TTCTATTCCCTGGGCTGTGCATGGGGTGGCCTCATC...TCCCCAGTGTTTACACATCCTTTGGATGCCAAGACAGCAGCTGGGGGTGGGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
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| CDS-3UTR CCA 90 bp | GGGCACAGAGGACGGACAAACGGACTGCGGGTCTTGGGAGAAGGTGCTCTGACTGATCTTGTCCCATTGTaGGGTCAGGTAGTACATGAT | + |
|
Preference number: 4 (lower is better) Translates to: GHRGRTNGLRVLGEGALTDLVPL*GQVVHD Trigger: ATCATGTACTACCTGACCCCACAATGGGACAAGATC...AGTCAGAGCACCTTCTCCCAAGACCCGCAGTCCGTTTGTCCGTCCTCTGTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
||
| CDS-3UTR CCA 90 bp | GGATGTGTAAACACTGGGGACATGAGCAGTGGTGGTCAAGGTGACAGCAGCCATAAGCGCCAACAGATCTaGAAGAAGAGAGGCGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GCVNTGDMSSGGQGDSSHKRQQI*KKRGGG Trigger: TCCCCCGCCTCTCTTCTTCCAGATCTGTTGGCGCTT...ATGGCTGCTGTCACCTTGACCACCACTGCTCATGTCCCCAGTGTTTACACATCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
||
| CDS-3UTR CCA 90 bp | TGTGTAAACACTGGGGACATGAGCAGTGGTGGTCAAGGTGACAGCAGCCATCCCGAACAGCGCGTACAGTaGGATGCAGATGACAGACGA | + |
|
Preference number: 4 (lower is better) Translates to: CVNTGDMSSGGQGDSSHPEQRVQ*DADDRR Trigger: TCGTCTGTCATCTGCATCCCACTGTACGCGCTGTTC...GGGATGGCTGCTGTCACCTTGACCACCACTGCTCATGTCCCCAGTGTTTACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
||
| CDS-3UTR GCA 90 bp | TGTGTAAACACTGGGGACATGAGCAGTGGTGGTCAAGGTGACAGCAGCCATCCCCAAGGAGAAGCTGGCTaGATAGTTGTCCATCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CVNTGDMSSGGQGDSSHPQGEAG*IVVHQQ Trigger: CTGCTGATGGACAACTATGCAGCCAGCTTCTCCTTG...GGGATGGCTGCTGTCACCTTGACCACCACTGCTCATGTCCCCAGTGTTTACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
||
| CDS-3UTR CCA 90 bp | GCTGCTGTCTTGGCATCCAAAGGATGTGTAAACACTGGGGACATGAGCAGTGGTTCTTGGTGGCCTCGCTaGGCACAGCACCATTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: AAVLASKGCVNTGDMSSGSWWPR*AQHHST Trigger: TGTTGAATGGTGCTGTGCCCAGCGAGGCCACCAAGA...ACCACTGCTCATGTCCCCAGTGTTTACACATCCTTTGGATGCCAAGACAGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGGCTAGGGTCTGTTCTGGGGTCAGGAACACTGGTCACGAGGCTGAGGGGAAGATGCCAATGTATGTaGACACCACCATCATACCAT | + |
|
Preference number: 4 (lower is better) Translates to: QRLGSVLGSGTLVTRLRGRCQCM*TPPSYH Trigger: ATGGTATGATGGTGGTGTCCACATACATTGGCATCT...TCCCCTCAGCCTCGTGACCAGTGTTCCTGACCCCAGAACAGACCCTAGCCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 |
||
| CDS-3UTR CCA 90 bp | CGGGCACATGGACTGAGGCCATTTGGCACATTGAATGGGGTTAGCACGTCTGGGCAACCAAGGAGAAGCTaGCTGCATAGTTGTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: RAHGLRPFGTLNGVSTSGQPRRS*LHSCPS Trigger: TGATGGACAACTATGCAGCCAGCTTCTCCTTGGTTG...CCCAGACGTGCTAACCCCATTCAATGTGCCAAATGGCCTCAGTCCATGTGCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
||
| 3UTR CAA 72 bp | ACTACAGCCACGGCTATCAGAATAAGGGCCCGCGTTTaGTCCCAGACCACTCCCTCAAAACACACACACACA | + |
|
Preference number: 4 (lower is better) Translates to: TTATAIRIRARV*SQTTPSKHTHT Trigger: TGTGTGTGTGTGTTTTGAGGGAGTGGTCTGGGACAAAACGCGGGCCCTTATTCTGATAGCCGTGGCTGTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| CDS-3UTR TCA 90 bp | GGATGTGTAAACACTGGGGACATGAGCAGTGGTGGTCAAGGTGACAGCAGCCATAGAAGGCGATGCAGATaGCCACGTTGTAGTAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: GCVNTGDMSSGGQGDSSHRRRCR*PRCSRC Trigger: GCATCTACTACAACGTGGTCATCTGCATCGCCTTCT...ATGGCTGCTGTCACCTTGACCACCACTGCTCATGTCCCCAGTGTTTACACATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 |
||
| CDS-3UTR CCA 90 bp | TGCTGTCTTGGCATCCAAAGGATGTGTAAACACTGGGGACATGAGCAGTGGTGGAGTACAAACTCGATCTaGTTGCCCCAGTTGCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: CCLGIQRMCKHWGHEQWWSTNSI*LPQLPR Trigger: ACGGGGCAACTGGGGCAACCAGATCGAGTTTGTACT...CCACCACTGCTCATGTCCCCAGTGTTTACACATCCTTTGGATGCCAAGACAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
||
| CDS-3UTR CCA 90 bp | CCCCCAGCTGCTGTCTTGGCATCCAAAGGATGTGTAAACACTGGGGACATGAGCCAACCAAGGAGAAGCTaGCTGCATAGTTGTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: PPAAVLASKGCVNTGDMSQPRRS*LHSCPS Trigger: TGATGGACAACTATGCAGCCAGCTTCTCCTTGGTTG...GCTCATGTCCCCAGTGTTTACACATCCTTTGGATGCCAAGACAGCAGCTGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
||
| CDS-3UTR CCA 90 bp | GGGCCCTCACCTTGTCTGGAGGAGGAAGATACAGATTTTCCTGGGCAGAGGCTAGCCCCAGTCTCTGCTTaGCTTTGTGGCATTTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GPSPCLEEEDTDFPGQRLAPVSA*LCGIFQ Trigger: TTGAAAAATGCCACAAAGCCAAGCAGAGACTGGGGC...TAGCCTCTGCCCAGGAAAATCTGTATCTTCCTCCTCCAGACAAGGTGAGGGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
||
| CDS-3UTR TCA 90 bp | ACCCCCAGCTGCTGTCTTGGCATCCAAAGGATGTGTAAACACTGGGGACATGAGGTTTCCAATGTCGTCTaGCAGCTTCAGCACATACAG | + |
|
Preference number: 4 (lower is better) Translates to: TPSCCLGIQRMCKHWGHEVSNVV*QLQHIQ Trigger: CTGTATGTGCTGAAGCTGTCAGACGACATTGGAAAC...CTCATGTCCCCAGTGTTTACACATCCTTTGGATGCCAAGACAGCAGCTGGGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
||
| CDS-3UTR TCA 90 bp | CCCCCAGCTGCTGTCTTGGCATCCAAAGGATGTGTAAACACTGGGGACATGAGCGCATTTTTCAAACGCTaGAGAAGTGTGTCCCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PPAAVLASKGCVNTGDMSAFFKR*RSVSPS Trigger: AGATGGGGACACACTTCTTCAGCGTTTGAAAAATGC...GCTCATGTCCCCAGTGTTTACACATCCTTTGGATGCCAAGACAGCAGCTGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
||
| CDS-3UTR CCA 90 bp | TGTGTAAACACTGGGGACATGAGCAGTGGTGGTCAAGGTGACAGCAGCCATCCCGATCTTGTCCCATTGTaGGGTCAGGTAGTACATGAT | + |
|
Preference number: 4 (lower is better) Translates to: CVNTGDMSSGGQGDSSHPDLVPL*GQVVHD Trigger: ATCATGTACTACCTGACCCCACAATGGGACAAGATC...GGGATGGCTGCTGTCACCTTGACCACCACTGCTCATGTCCCCAGTGTTTACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
||
| 3UTR CAA 72 bp | AATGTGGCCGTGAAGTACACCACTTTCCCTGAAGACTaGACTCCTCGGATGAGACAGAGGAAGACAACCACC | + |
|
Preference number: 4 (lower is better) Translates to: NVAVKYTTFPED*TPRMRQRKTTT Trigger: GGTGGTTGTCTTCCTCTGTCTCATCCGAGGAGTCAAGTCTTCAGGGAAAGTGGTGTACTTCACGGCCACATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| 3UTR CAA 72 bp | CAGTCTGGCATCCGGAATGAAGATGGAAAGAGTGACTaGTCTGGAGGAGGAAGATACAGATTTTCCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QSGIRNEDGKSD*SGGGRYRFSWA Trigger: TGCCCAGGAAAATCTGTATCTTCCTCCTCCAGACAAGTCACTCTTTCCATCTTCATTCCGGATGCCAGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| CDS-3UTR CCA 90 bp | TGCTGTCTTGGCATCCAAAGGATGTGTAAACACTGGGGACATGAGCAGTGGTGGAGATGCCAATGTATGTaGACACCACCATCATACCAT | + |
|
Preference number: 4 (lower is better) Translates to: CCLGIQRMCKHWGHEQWWRCQCM*TPPSYH Trigger: ATGGTATGATGGTGGTGTCCACATACATTGGCATCT...CCACCACTGCTCATGTCCCCAGTGTTTACACATCCTTTGGATGCCAAGACAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 |
||
| CDS-3UTR CCA 90 bp | GTGGTTGTAGGTGATTGGCCGGTACTGGATCACCGTGAAGATGAGAATGAAAAAGCAGCACGTGCGTCATaGACGAGAAGAAGTAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: VVVGDWPVLDHREDENEKAARAS*TRRSSR Trigger: TCTACTACTTCTTCTCGTCCATGACGCACGTGCTGC...TTTTTCATTCTCATCTTCACGGTGATCCAGTACCGGCCAATCACCTACAACCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
||
| CDS-3UTR CAA 90 bp | GGCAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGGGTGGCCACAGGTCCTaGAGCCGAAGCCATCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GRPPPVRLPVSVVGARVGGGHRS*SRSHPG Trigger: CCCGGGATGGCTTCGGCTCAAGGACCTGTGGCCACC...CCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCCTGCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163288.2 |
||
| CDS-3UTR CAA 90 bp | ACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGCGGGCCGGGAGCCATaGGTGAGGTTGGAAGCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TGCDGAGLHLSASQSPWWAGREP*VRLEAS Trigger: GGACGCTTCCAACCTCACCAATGGCTCCCGGCCCGC...CCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCCTGCCCCATCACACCCTGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
||
| CDS-3UTR CAA 90 bp | CTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTGCGGGCCGGGAGCCATaGGTGAGGTTGGAAGCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LHLSASQSPWWEQGLGGVAGREP*VRLEAS Trigger: GGACGCTTCCAACCTCACCAATGGCTCCCGGCCCGC...AACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CAA 90 bp | CCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTAGGTTCTGGTCCTTCTaGGTGGCCTCGCTGGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: PPPVRLPVSVVGARVGWGRFWSF*VASLGT Trigger: TGTGCCCAGCGAGGCCACCAAGAAGGACCAGAACCT...ACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 |
||
| CDS-3UTR CAA 90 bp | AGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGAGGTTCTGGTCCTTCTaGGTGGCCTCGCTGGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: RPPPVRLPVSVVGARVGWRFWSF*VASLGT Trigger: TGTGCCCAGCGAGGCCACCAAGAAGGACCAGAACCT...CCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 |
||
| CDS-3UTR CAA 90 bp | ACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGAGGTTCTGGTCCTTCTaGGTGGCCTCGCTGGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: TGCDGAGLHLSASQSPWWRFWSF*VASLGT Trigger: TGTGCCCAGCGAGGCCACCAAGAAGGACCAGAACCT...CCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCCTGCCCCATCACACCCTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 |
||
| CDS-3UTR CAA 90 bp | TCCCAGACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGCCAGGCAGCCCTGGCTaGCAAACTGGCCGAAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SQTGCDGAGLHLSASQSPPGSPG*QTGRRK Trigger: TTTCCTTCGGCCAGTTTGCAAGCCAGGGCTGCCTGG...CGGAGACTGGGAGGCGGACAGGTGGAGGCCTGCCCCATCACACCCTGTCTGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 |
||
| CDS-3UTR CAA 90 bp | TCCCAGACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGGAGCCATTGGTGAGGTaGGAAGCGTCCAGCACACCG | + |
|
Preference number: 5 (lower is better) Translates to: SQTGCDGAGLHLSASQSPEPLVR*EASSTP Trigger: CGGTGTGCTGGACGCTTCCAACCTCACCAATGGCTC...CGGAGACTGGGAGGCGGACAGGTGGAGGCCTGCCCCATCACACCCTGTCTGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
||
| CDS-3UTR CAA 90 bp | CTGCAGAGGGCACAGAGGACGGACAAACGGACTGCGGGTCTTGGGAGAAGGTGCGCGGGCCGGGAGCCATaGGTGAGGTTGGAAGCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LQRAQRTDKRTAGLGRRCAGREP*VRLEAS Trigger: GGACGCTTCCAACCTCACCAATGGCTCCCGGCCCGC...GCACCTTCTCCCAAGACCCGCAGTCCGTTTGTCCGTCCTCTGTGCCCTCTGCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
||
| CDS-3UTR CAA 90 bp | GGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGTTGGCCTCCAGGATCTaGTCCCATTGTGGGGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GLHLSASQSPWWEQGLGGLASRI*SHCGVR Trigger: CCTGACCCCACAATGGGACAAGATCCTGGAGGCCAA...CCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGACAAACTCGATCTGGTaGCCCCAGTTGCCCCGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RPPPVRLPVSVVGARVGWTNSIW*PQLPRV Trigger: CACACGGGGCAACTGGGGCAACCAGATCGAGTTTGT...CCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
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| CDS-3UTR CAA 90 bp | CTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTGAGCCATTGGTGAGGTaGGAAGCGTCCAGCACACCG | + |
|
Preference number: 5 (lower is better) Translates to: LHLSASQSPWWEQGLGGVEPLVR*EASSTP Trigger: CGGTGTGCTGGACGCTTCCAACCTCACCAATGGCTC...AACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
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| CDS-3UTR CAA 90 bp | CCCAGACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTTTGGCCTCCAGGATCTaGTCCCATTGTGGGGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PRQGVMGQASTCPPPSLRLASRI*SHCGVR Trigger: CCTGACCCCACAATGGGACAAGATCCTGGAGGCCAA...ACGGAGACTGGGAGGCGGACAGGTGGAGGCCTGCCCCATCACACCCTGTCTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
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| CDS-3UTR CAA 90 bp | CTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCCACAAACTCGATCTGGTaGCCCCAGTTGCCCCGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSASQSPWWEQGLGGVSPTNSIW*PQLPRV Trigger: CACACGGGGCAACTGGGGCAACCAGATCGAGTTTGT...GGGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
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| CDS-3UTR CAA 90 bp | TCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCCAGGCAGCCCTGGCTaGCAAACTGGCCGAAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: STCPPPSLRGGSKGWVGFPGSPG*QTGRRK Trigger: TTTCCTTCGGCCAGTTTGCAAGCCAGGGCTGCCTGG...AAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 |
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| CDS-3UTR CAA 90 bp | ACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCGAGCCATTGGTGAGGTaGGAAGCGTCCAGCACACCG | + |
|
Preference number: 5 (lower is better) Translates to: TCPPPSLRGGSKGWVGFLEPLVR*EASSTP Trigger: CGGTGTGCTGGACGCTTCCAACCTCACCAATGGCTC...GAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
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| CDS-3UTR CAA 90 bp | TCCCTCCATAAACAAGTGCTTTGGGCAGGCTGCTGGGTCGTGGGCCTTTGCTGGGCGGGCCGGGAGCCATaGGTGAGGTTGGAAGCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLHKQVLWAGCWVVGLCWAGREP*VRLEAS Trigger: GGACGCTTCCAACCTCACCAATGGCTCCCGGCCCGC...CCAGCAAAGGCCCACGACCCAGCAGCCTGCCCAAAGCACTTGTTTATGGAGGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
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| CDS-3UTR CAA 90 bp | GGCAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGGGCCCCAGTCTCTGCTaGGCTTTGTGGCATTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GRPPPVRLPVSVVGARVGGPSLC*ALWHFS Trigger: TGAAAAATGCCACAAAGCCAAGCAGAGACTGGGGCC...CCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCCTGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CAA 90 bp | GCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGCAGGATCTTGTCCCATaGTGGGGTCAGGTAGTACAT | + |
|
Preference number: 5 (lower is better) Translates to: ASTCPPPSLRGGSKGWVGQDLVP*WGQVVH Trigger: ATGTACTACCTGACCCCACAATGGGACAAGATCCTG...CCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
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| CDS-3UTR CAA 90 bp | ACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCTTGGCCTCCAGGATCTaGTCCCATTGTGGGGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TCPPPSLRGGSKGWVGFLLASRI*SHCGVR Trigger: CCTGACCCCACAATGGGACAAGATCCTGGAGGCCAA...GAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGCCCCAGTCTCTGCTaGGCTTTGTGGCATTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: QASTCPPPSLRGGSKGWVGPSLC*ALWHFS Trigger: TGAAAAATGCCACAAAGCCAAGCAGAGACTGGGGCC...CACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CAA 90 bp | AGCAGCCATCCCAGACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCCACTTTCCCTGAAGACTaGACTCCTCGGATGAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: SSHPRQGVMGQASTCPPPTFPED*TPRMRQ Trigger: CTGTCTCATCCGAGGAGTCAAGTCTTCAGGGAAAGT...GGGAGGCGGACAGGTGGAGGCCTGCCCCATCACACCCTGTCTGGGATGGCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTACTTTCCCTGAAGACTaGACTCCTCGGATGAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: AGLHLSASQSPWWEQGLGTFPED*TPRMRQ Trigger: CTGTCTCATCCGAGGAGTCAAGTCTTCAGGGAAAGT...ACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CAA 90 bp | AGCAGCCATCCCAGACAGGGTGTGATGGGGCAGGCCTCCACCTGTCCGCCTCCCCAGGATCTTGTCCCATaGTGGGGTCAGGTAGTACAT | + |
|
Preference number: 5 (lower is better) Translates to: SSHPRQGVMGQASTCPPPQDLVP*WGQVVH Trigger: ATGTACTACCTGACCCCACAATGGGACAAGATCCTG...GGGAGGCGGACAGGTGGAGGCCTGCCCCATCACACCCTGTCTGGGATGGCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
||
| CDS-3UTR CAA 90 bp | CCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCGGCCCCAGTCTCTGCTaGGCTTTGTGGCATTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PPVRLPVSVVGARVGWGFGPSLC*ALWHFS Trigger: TGAAAAATGCCACAAAGCCAAGCAGAGACTGGGGCC...GAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CAA 90 bp | TCCATAAACAAGTGCTTTGGGCAGGCTGCTGGGTCGTGGGCCTTTGCTGGCTGGAGGTTCTGGTCCTTCTaGGTGGCCTCGCTGGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: SINKCFGQAAGSWAFAGWRFWSF*VASLGT Trigger: TGTGCCCAGCGAGGCCACCAAGAAGGACCAGAACCT...CCAGCCAGCAAAGGCCCACGACCCAGCAGCCTGCCCAAAGCACTTGTTTATGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
||
| CDS-3UTR CAA 90 bp | TGGGCAGAGGCTAGGGTCTGTTCTGGGGTCAGGAACACTGGTCACGAGGCTGAGTTGGCCTCCAGGATCTaGTCCCATTGTGGGGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WAEARVCSGVRNTGHEAELASRI*SHCGVR Trigger: CCTGACCCCACAATGGGACAAGATCCTGGAGGCCAA...CTCAGCCTCGTGACCAGTGTTCCTGACCCCAGAACAGACCCTAGCCTCTGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
||
| CDS TCA 90 bp | TGGTTCCAGGAAAGGGTGTCACTGAATGAGAGGGTGGCCTGCAGATaGATCCCTGTTCTGGGGAAGGGGTGGCCACAGGTCCTTGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: WFQERVSLNERVACR*IPVLGKGWPQVLEP Trigger: CGGCTCAAGGACCTGTGGCCACCCCTTCCCCAGAACAGGGATTCATCTGCAGGCCACCCTCTCATTCAGTGACACCCTTTCCTGGAACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169990.8 |
||
| CDS-3UTR CAA 90 bp | TCCCTCCATAAACAAGTGCTTTGGGCAGGCTGCTGGGTCGTGGGCCTTTGCTGGACAAACTCGATCTGGTaGCCCCAGTTGCCCCGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SLHKQVLWAGCWVVGLCWTNSIW*PQLPRV Trigger: CACACGGGGCAACTGGGGCAACCAGATCGAGTTTGT...CCAGCAAAGGCCCACGACCCAGCAGCCTGCCCAAAGCACTTGTTTATGGAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
||
| CDS-3UTR CAA 90 bp | TCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCCCTTACTTTCCCTGAAGACTaGACTCCTCGGATGAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: SASQSPWWEQGLGGVSPLTFPED*TPRMRQ Trigger: CTGTCTCATCCGAGGAGTCAAGTCTTCAGGGAAAGT...AAGGGGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGAGTCTCTGCTTGGCTTaGTGGCATTTTTCAAACGCT | + |
|
Preference number: 5 (lower is better) Translates to: QASTCPPPSLRGGSKGWVSLCLA*WHFSNA Trigger: AGCGTTTGAAAAATGCCACAAAGCCAAGCAGAGACT...CACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCTCCACCTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGAGTCTCTGCTTGGCTTaGTGGCATTTTTCAAACGCT | + |
|
Preference number: 5 (lower is better) Translates to: RPPPVRLPVSVVGARVGWSLCLA*WHFSNA Trigger: AGCGTTTGAAAAATGCCACAAAGCCAAGCAGAGACT...CCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAGGTGGAGGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
||
| CDS GCA 90 bp | TTTGAACATGGGGCTGATCCGCCAGACCCCCAGGCAGCCCTGGCTTaGAAACTGGCCGAAGGAAAGCTCCATGAAGAAGAGAGGAATCCC | + |
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Preference number: 5 (lower is better) Translates to: FEHGADPPDPQAALA*KLAEGKLHEEERNP Trigger: GGGATTCCTCTCTTCTTCATGGAGCTTTCCTTCGGCCAGTTTGCAAGCCAGGGCTGCCTGGGGGTCTGGCGGATCAGCCCCATGTTCAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000123994.3 ENSMUST00000132043.9 ENSMUST00000149168.2 ENSMUST00000163288.2 ENSMUST00000169990.8 |
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| CDS-3UTR CAA 90 bp | TGTGTAAACACTGGGGACATGAGCAGTGGTGGTCAAGGTGACAGCAGCCATCCCATCTGGTTGCCCCAGTaGCCCCGTGTGAGGTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: CVNTGDMSSGGQGDSSHPIWLPQ*PRVRFW Trigger: CCAGAACCTCACACGGGGCAACTGGGGCAACCAGAT...GGGATGGCTGCTGTCACCTTGACCACCACTGCTCATGTCCCCAGTGTTTACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 ENSMUST00000163288.2 |
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| CDS-3UTR CAA 90 bp | CTGTCCGCCTCCCAGTCTCCGTGGTGGGAGCAAGGGTTGGGTGGGGTTTCTCCCAGTCTCTGCTTGGCTTaGTGGCATTTTTCAAACGCT | + |
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Preference number: 5 (lower is better) Translates to: LSASQSPWWEQGLGGVSPSLCLA*WHFSNA Trigger: AGCGTTTGAAAAATGCCACAAAGCCAAGCAGAGACT...GGGAGAAACCCCACCCAACCCTTGCTCCCACCACGGAGACTGGGAGGCGGACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 ENSMUST00000169885.8 |
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| CDS CCA 90 bp | AGTACAAACTCGATCTGGTTGCCCCAGTTGCCCCGTGTGAGGTTCTaGTCCTTCTTGGTGGCCTCGCTGGGCACAGCACCATTCAACATC | + |
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Preference number: 5 (lower is better) Translates to: STNSIWLPQLPRVRF*SFLVASLGTAPFNI Trigger: GATGTTGAATGGTGCTGTGCCCAGCGAGGCCACCAAGAAGGACCAGAACCTCACACGGGGCAACTGGGGCAACCAGATCGAGTTTGTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
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| CDS CCA 90 bp | AGTACAAACTCGATCTGGTTGCCCCAGTTGCCCCGTGTGAGGTTCTaGTCCTTCTTGGTGGCCTCGCTGGGCACAGCACCATTCTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: STNSIWLPQLPRVRF*SFLVASLGTAPFCS Trigger: AGAACAGAATGGTGCTGTGCCCAGCGAGGCCACCAAGAAGGACCAGAACCTCACACGGGGCAACTGGGGCAACCAGATCGAGTTTGTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132043.9 ENSMUST00000163288.2 |
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| CDS-3UTR CAA 90 bp | AGGCTAGGGTCTGTTCTGGGGTCAGGAACACTGGTCACGAGGCTGAGGGGAACCACTTTCCCTGAAGACTaGACTCCTCGGATGAGACAG | + |
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Preference number: 5 (lower is better) Translates to: RLGSVLGSGTLVTRLRGTTFPED*TPRMRQ Trigger: CTGTCTCATCCGAGGAGTCAAGTCTTCAGGGAAAGT...GGTTCCCCTCAGCCTCGTGACCAGTGTTCCTGACCCCAGAACAGACCCTAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
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| CDS-3UTR CAA 90 bp | TTCTGCACACACTGGGCAGCGGCGGGCGGCACACCGTTATTGCTACAGAGGATTGGCCCCAGTCTCTGCTaGGCTTTGTGGCATTTTTCA | + |
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Preference number: 5 (lower is better) Translates to: FCTHWAAAGGTPLLLQRIGPSLC*ALWHFS Trigger: TGAAAAATGCCACAAAGCCAAGCAGAGACTGGGGCC...AATCCTCTGTAGCAATAACGGTGTGCCGCCCGCCGCTGCCCAGTGTGTGCAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
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| CDS TCA 90 bp | GGCCTGGCTAAAGGAAACAGAGGTGGTTCCAGGAAAGGGTGTCACTaGATGAGAGGGTGGCCTGCAGATGAATCCCTGTTCTGGGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: GLAKGNRGGSRKGCH*MRGWPADESLFWGR Trigger: CCTTCCCCAGAACAGGGATTCATCTGCAGGCCACCCTCTCATTCAGTGACACCCTTTCCTGGAACCACCTCTGTTTCCTTTAGCCAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169990.8 |
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| CDS-3UTR CAA 90 bp | GGAACCGGTGGGATGTGGACACAGAACCTCTTATCCCATAGTGAAACAGCTCAGCCAGGCAGCCCTGGCTaGCAAACTGGCCGAAGGAAA | + |
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Preference number: 5 (lower is better) Translates to: GTGGMWTQNLLSHSETAQPGSPG*QTGRRK Trigger: TTTCCTTCGGCCAGTTTGCAAGCCAGGGCTGCCTGG...CTGAGCTGTTTCACTATGGGATAAGAGGTTCTGTGTCCACATCCCACCGGTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 |
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| CDS-3UTR CAA 90 bp | TCCATAAACAAGTGCTTTGGGCAGGCTGCTGGGTCGTGGGCCTTTGCTGGCTGGCAGGATCTTGTCCCATaGTGGGGTCAGGTAGTACAT | + |
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Preference number: 5 (lower is better) Translates to: SINKCFGQAAGSWAFAGWQDLVP*WGQVVH Trigger: ATGTACTACCTGACCCCACAATGGGACAAGATCCTG...CCAGCCAGCAAAGGCCCACGACCCAGCAGCCTGCCCAAAGCACTTGTTTATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 |
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| CDS TCA 90 bp | TGGCTAAAGGAAACAGAGGTGGTTCCAGGAAAGGGTGTCACTGAATaGGAGGGTGGCCTGCAGATGAATCCCTGTTCTGGGGAAGGGGTG | + |
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Preference number: 5 (lower is better) Translates to: WLKETEVVPGKGVTE*EGGLQMNPCSGEGV Trigger: CACCCCTTCCCCAGAACAGGGATTCATCTGCAGGCCACCCTCTCATTCAGTGACACCCTTTCCTGGAACCACCTCTGTTTCCTTTAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169990.8 |
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| CDS-3UTR CAA 90 bp | CCGGTACTGGATCACCGTGAAGATGAGAATGAAAAAGATGATAGCCGGAGAAACAGGCTCTCGATCTGGTaGCCCCAGTTGCCCCGTGTG | + |
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Preference number: 5 (lower is better) Translates to: PVLDHREDENEKDDSRRNRLSIW*PQLPRV Trigger: CACACGGGGCAACTGGGGCAACCAGATCGAGAGCCT...GTTTCTCCGGCTATCATCTTTTTCATTCTCATCTTCACGGTGATCCAGTACCGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
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| CDS-3UTR CAA 90 bp | TGTGTAAACACTGGGGACATGAGCAGTGGTGGTCAAGGTGACAGCAGCCATCCCAGTCTCTGCTTGGCTTaGTGGCATTTTTCAAACGCT | + |
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Preference number: 5 (lower is better) Translates to: CVNTGDMSSGGQGDSSHPSLCLA*WHFSNA Trigger: AGCGTTTGAAAAATGCCACAAAGCCAAGCAGAGACT...GGGATGGCTGCTGTCACCTTGACCACCACTGCTCATGTCCCCAGTGTTTACACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000163288.2 |
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| CDS CCA 72 bp | CGCTGGGCACAGCACCATTCTGTTCTGGGGAAGGGGTaGCCACAGGTCCTTGAGCCGAAGCCATCCCGGGAT | + |
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Preference number: 6 (lower is better) Translates to: RWAQHHSVLGKG*PQVLEPKPSRD Trigger: ATCCCGGGATGGCTTCGGCTCAAGGACCTGTGGCCACCCCTTCCCCAGAACAGAATGGTGCTGTGCCCAGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163288.2 |
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| CDS TCA 72 bp | GAAGGCTCTCGATCTGGTTGCCCCAGTTGCCCCGTGTaGGGTTCTGGTCCTTCTTGGTGGCCTCGCTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: EGSRSGCPSCPV*GSGPSWWPRWA Trigger: TGCCCAGCGAGGCCACCAAGAAGGACCAGAACCTCACACGGGGCAACTGGGGCAACCAGATCGAGAGCCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149168.2 |
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| CDS GCA 72 bp | GGGGCTGATCCGCCAGACCCCCAGGCAGCCCTGGCTTaGAAACTGGCCGAAGGAAAGCTCCATGAAGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: GADPPDPQAALA*KLAEGKLHEEE Trigger: CTCTTCTTCATGGAGCTTTCCTTCGGCCAGTTTGCAAGCCAGGGCTGCCTGGGGGTCTGGCGGATCAGCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000123994.3 ENSMUST00000132043.9 ENSMUST00000149168.2 ENSMUST00000163288.2 ENSMUST00000169990.8 |
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| CDS CCA 72 bp | TCGATCTGGTTGCCCCAGTTGCCCCGTGTGAGGTTCTaGTCCTTCTTGGTGGCCTCGCTGGGCACAGCACCA | + |
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Preference number: 6 (lower is better) Translates to: SIWLPQLPRVRF*SFLVASLGTAP Trigger: TGGTGCTGTGCCCAGCGAGGCCACCAAGAAGGACCAGAACCTCACACGGGGCAACTGGGGCAACCAGATCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000132043.9 ENSMUST00000149168.2 ENSMUST00000163288.2 ENSMUST00000169990.8 |
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| CDS CAA 72 bp | TTGCCCCAGTTGCCCCGTGTGAGGTTCTGGTCCTTCTaGGTGGCCTCGCTGGGCACAGCACCATTCAACATC | + |
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Preference number: 6 (lower is better) Translates to: LPQLPRVRFWSF*VASLGTAPFNI Trigger: GATGTTGAATGGTGCTGTGCCCAGCGAGGCCACCAAGAAGGACCAGAACCTCACACGGGGCAACTGGGGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 |
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| CDS CAA 72 bp | TTGCCCCAGTTGCCCCGTGTGAGGTTCTGGTCCTTCTaGGTGGCCTCGCTGGGCACAGCACCATTCTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: LPQLPRVRFWSF*VASLGTAPFCS Trigger: AGAACAGAATGGTGCTGTGCCCAGCGAGGCCACCAAGAAGGACCAGAACCTCACACGGGGCAACTGGGGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132043.9 ENSMUST00000163288.2 |
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| CDS CAA 90 bp | TCGATCTGGTTGCCCCAGTTGCCCCGTGTGAGGTTCTGGTCCTTCTaGGTGGCCTCGCTGGGCACAGCACCATTCAACATCCCTTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: SIWLPQLPRVRFWSF*VASLGTAPFNIPLA Trigger: TGCCAAAGGGATGTTGAATGGTGCTGTGCCCAGCGAGGCCACCAAGAAGGACCAGAACCTCACACGGGGCAACTGGGGCAACCAGATCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000149168.2 |
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| CDS CAA 72 bp | ACGCTCGTCAGTACAAACTCGATCTGGTTGCCCCAGTaGCCCCGTGTGAGGTTCTGGTCCTTCTTGGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: TLVSTNSIWLPQ*PRVRFWSFLVA Trigger: GGCCACCAAGAAGGACCAGAACCTCACACGGGGCAACTGGGGCAACCAGATCGAGTTTGTACTGACGAGCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030269.14 ENSMUST00000063857.11 ENSMUST00000132043.9 ENSMUST00000163288.2 ENSMUST00000169990.8 |
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