Pregenerated sensors for SLC6A8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019558Ensembl transcript IDs: ENSMUST00000033752.14, ENSMUST00000114464.9, ENSMUST00000114465.9, ENSMUST00000114467.9, ENSMUST00000164449.8, ENSMUST00000168831.8
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGGGAGGCAGGCAGGTGGGCTTGGCAAGGCTAGGAGATGGGTCCTaGGCACTGGAAAGAAGGAGAGGAGGTAGGGCCTGGAAGCAATGC | + |
|
Preference number: 1 (lower is better) Translates to: LGGRQVGLARLGDGS*ALERRRGGRAWKQC Trigger: GCATTGCTTCCAGGCCCTACCTCCTCTCCTTCTTTCCAGTGCCCAGGACCCATCTCCTAGCCTTGCCAAGCCCACCTGCCTGCCTCCCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 ENSMUST00000114467.9 |
||
| 3UTR GCA 90 bp | AGGATCCCTTTCCCGGGCTTTGTCCATGGGAAATCCCTGCAATCCTaGCCAGGGAGCTGGGTGTGGGCAAGTCTGAGCATGTCAGGTGAG | + |
|
Preference number: 1 (lower is better) Translates to: RIPFPGFVHGKSLQS*PGSWVWASLSMSGE Trigger: CTCACCTGACATGCTCAGACTTGCCCACACCCAGCTCCCTGGGCAGGATTGCAGGGATTTCCCATGGACAAAGCCCGGGAAAGGGATCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR TCA 90 bp | GGAAATCCCTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAAGTCTaGGCATGTCAGGTGAGCAGACCCAGATTCCCTGGAACAGTGTTA | + |
|
Preference number: 1 (lower is better) Translates to: GNPCNPAQGAGCGQV*ACQVSRPRFPGTVL Trigger: TAACACTGTTCCAGGGAATCTGGGTCTGCTCACCTGACATGCTCAGACTTGCCCACACCCAGCTCCCTGGGCAGGATTGCAGGGATTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR CCA 90 bp | GGAGATGGGTCCTGGGCACTGGAAAGAAGGAGAGGAGGTAGGGCCTaGAAGCAATGCAAATACCAGCTTAGTTGTGGGGTGGGGAGGAGA | + |
|
Preference number: 1 (lower is better) Translates to: GDGSWALERRRGGRA*KQCKYQLSCGVGRR Trigger: TCTCCTCCCCACCCCACAACTAAGCTGGTATTTGCATTGCTTCCAGGCCCTACCTCCTCTCCTTCTTTCCAGTGCCCAGGACCCATCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 ENSMUST00000114467.9 |
||
| 3UTR CCA 90 bp | TACACGGAAGACTTGAGATGTCGAAAGTACATCAGCCTTTTAGCTTaGAGGTGGGAGCCATGCCCAGGATCCCTTTCCCGGGCTTTGTCC | + |
|
Preference number: 1 (lower is better) Translates to: YTEDLRCRKYISLLA*RWEPCPGSLSRALS Trigger: GGACAAAGCCCGGGAAAGGGATCCTGGGCATGGCTCCCACCTCCAAGCTAAAAGGCTGATGTACTTTCGACATCTCAAGTCTTCCGTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR TCA 90 bp | GGGAAATCCCTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAAGTCTGAGCATGCAAAGGATGAGCTGGTaGTGTGAGCTGGGGGTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: GKSLQSCPGSWVWASLSMQRMSW*CELGVP Trigger: AGGCACCCCCAGCTCACATCACCAGCTCATCCTTTG...CATGCTCAGACTTGCCCACACCCAGCTCCCTGGGCAGGATTGCAGGGATTTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR TCA 90 bp | GGTGGGCTTGGCAAGGCTAGGAGATGGGTCCTGGGCACTGGAAAGAAGGAGAGGCAAAGGATGAGCTGGTaGTGTGAGCTGGGGGTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: GGLGKARRWVLGTGKKERQRMSW*CELGVP Trigger: AGGCACCCCCAGCTCACATCACCAGCTCATCCTTTG...CCTCTCCTTCTTTCCAGTGCCCAGGACCCATCTCCTAGCCTTGCCAAGCCCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 ENSMUST00000114467.9 |
||
| 3UTR-3UTR CCA 90 bp | CATGGGAAATCCCTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAAGTCTGAGCTTACAGAGCAGAGCTTaGGAGGCAGGCAGGTGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: HGKSLQSCPGSWVWASLSLQSRA*EAGRWA Trigger: AGCCCACCTGCCTGCCTCCCAAGCTCTGCTCTGTAA...GCTCAGACTTGCCCACACCCAGCTCCCTGGGCAGGATTGCAGGGATTTCCCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR TCA 90 bp | AACTGTCAAGGAAAGGCAAGCCCCCGGAGGGATGAGTGGGGGCTAAAGTTGGGGCAAAGGATGAGCTGGTaGTGTGAGCTGGGGGTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: NCQGKASPRRDEWGLKLGQRMSW*CELGVP Trigger: AGGCACCCCCAGCTCACATCACCAGCTCATCCTTTG...CCCCAACTTTAGCCCCCACTCATCCCTCCGGGGGCTTGCCTTTCCTTGACAGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 6 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 ENSMUST00000114467.9 ENSMUST00000164449.8 ENSMUST00000168831.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTTGTCCATGGGAAATCCCTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAAGGTGTGGGGACACCATTaGGGCTCCCACTTTCCCACT | + |
|
Preference number: 2 (lower is better) Translates to: LCPWEIPAILPRELGVGKVWGHH*GSHFPT Trigger: AGTGGGAAAGTGGGAGCCTCAATGGTGTCCCCACAC...CTTGCCCACACCCAGCTCCCTGGGCAGGATTGCAGGGATTTCCCATGGACAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR CCA 90 bp | CTTTGTCCATGGGAAATCCCTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAAGGGCAAGGCTAGGAGATaGGTCCTGGGCACTGGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: LCPWEIPAILPRELGVGKGKARR*VLGTGK Trigger: CTTTCCAGTGCCCAGGACCCATCTCCTAGCCTTGCC...CTTGCCCACACCCAGCTCCCTGGGCAGGATTGCAGGGATTTCCCATGGACAAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR TCA 90 bp | CCAAACTGTCAAGGAAAGGCAAGCCCCCGGAGGGATGAGTGGGGGCTAAAGTTGCAAAGGATGAGCTGGTaGTGTGAGCTGGGGGTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: PNCQGKASPRRDEWGLKLQRMSW*CELGVP Trigger: AGGCACCCCCAGCTCACATCACCAGCTCATCCTTTG...CAACTTTAGCCCCCACTCATCCCTCCGGGGGCTTGCCTTTCCTTGACAGTTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 6 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 ENSMUST00000114467.9 ENSMUST00000164449.8 ENSMUST00000168831.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAAGTCTGAGCATGTCAGGTGAGTGGCTGTTTCAGGCTTaGTGGGACACAGATGTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: LQSCPGSWVWASLSMSGEWLFQA*WDTDVG Trigger: ACCCACATCTGTGTCCCATCAAGCCTGAAACAGCCA...CTCACCTGACATGCTCAGACTTGCCCACACCCAGCTCCCTGGGCAGGATTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR CCA 90 bp | GGCTTTGTCCATGGGAAATCCCTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCATCCCACTCCAGTCTCTaGCTGGAGACCATACAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: GFVHGKSLQSCPGSWVWASHSSL*LETIQN Trigger: GTTCTGTATGGTCTCCAGCCAGAGACTGGAGTGGGA...TGCCCACACCCAGCTCCCTGGGCAGGATTGCAGGGATTTCCCATGGACAAAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR CCA 90 bp | CTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAAGTCTGAGCATGTCAGGTGAGAAGTTGGGGCTGCTATaGCTACCAAAGGATGAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: LQSCPGSWVWASLSMSGEKLGLL*LPKDEL Trigger: CAGCTCATCCTTTGGTAGCCATAGCAGCCCCAACTT...CTCACCTGACATGCTCAGACTTGCCCACACCCAGCTCCCTGGGCAGGATTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR CCA 90 bp | CTTTGTCCATGGGAAATCCCTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAAGTCCCACTCCAGTCTCTaGCTGGAGACCATACAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: LCPWEIPAILPRELGVGKSHSSL*LETIQN Trigger: GTTCTGTATGGTCTCCAGCCAGAGACTGGAGTGGGA...CTTGCCCACACCCAGCTCCCTGGGCAGGATTGCAGGGATTTCCCATGGACAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR CCA 90 bp | CATGGGAAATCCCTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAAGTCTGAGCCAGACCCAGATTCCCTaGAACAGTGTTACAGCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: HGKSLQSCPGSWVWASLSQTQIP*NSVTAF Trigger: GAAGGCTGTAACACTGTTCCAGGGAATCTGGGTCTG...GCTCAGACTTGCCCACACCCAGCTCCCTGGGCAGGATTGCAGGGATTTCCCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR CCA 90 bp | CATGGGAAATCCCTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAAGTCTGAGCTGTGAAGGAAAGGAGTaGAAATGTGGAGATGGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: HGKSLQSCPGSWVWASLSCEGKE*KCGDGG Trigger: CCCACCATCTCCACATTTCCACTCCTTTCCTTCACA...GCTCAGACTTGCCCACACCCAGCTCCCTGGGCAGGATTGCAGGGATTTCCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR CCA 90 bp | CTTTGTCCATGGGAAATCCCTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAAGCAGACCCAGATTCCCTaGAACAGTGTTACAGCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: LCPWEIPAILPRELGVGKQTQIP*NSVTAF Trigger: GAAGGCTGTAACACTGTTCCAGGGAATCTGGGTCTG...CTTGCCCACACCCAGCTCCCTGGGCAGGATTGCAGGGATTTCCCATGGACAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR TCA 90 bp | CCAGCTCTGTGTGAAGGAAGCCTTTCTAAGGGCTACTTGGCTGTTTCAGGCTTGCAAAGGATGAGCTGGTaGTGTGAGCTGGGGGTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: PALCEGSLSKGYLAVSGLQRMSW*CELGVP Trigger: AGGCACCCCCAGCTCACATCACCAGCTCATCCTTTG...CAAGCCTGAAACAGCCAAGTAGCCCTTAGAAAGGCTTCCTTCACACAGAGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR GCA 90 bp | GGGAAATCCCTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAAGTCTGAGCATGAGGGCCTGGAAGCAATaGAAATACCAGCTTAGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: GKSLQSCPGSWVWASLSMRAWKQ*KYQLSC Trigger: ACAACTAAGCTGGTATTTGCATTGCTTCCAGGCCCT...CATGCTCAGACTTGCCCACACCCAGCTCCCTGGGCAGGATTGCAGGGATTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR GCA 90 bp | GGTGGGCTTGGCAAGGCTAGGAGATGGGTCCTGGGCACTGGAAAGAAGGAGAGGAGGGCCTGGAAGCAATaGAAATACCAGCTTAGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: GGLGKARRWVLGTGKKERRAWKQ*KYQLSC Trigger: ACAACTAAGCTGGTATTTGCATTGCTTCCAGGCCCT...CCTCTCCTTCTTTCCAGTGCCCAGGACCCATCTCCTAGCCTTGCCAAGCCCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 ENSMUST00000114467.9 |
||
| 3UTR-3UTR GCA 90 bp | AGAAGGAGAGGAGGTAGGGCCTGGAAGCAATGCAAATACCAGCTTAGTTGTGGGAAATCCCTGCAATCCTaGCCAGGGAGCTGGGTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: RRRGGRAWKQCKYQLSCGKSLQS*PGSWVW Trigger: CCACACCCAGCTCCCTGGGCAGGATTGCAGGGATTT...CCCACAACTAAGCTGGTATTTGCATTGCTTCCAGGCCCTACCTCCTCTCCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR CCA 90 bp | CCAGCTCTGTGTGAAGGAAGCCTTTCTAAGGGCTACTTGGCTGTTTCAGGCTTGTTACAGAGCAGAGCTTaGGAGGCAGGCAGGTGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: PALCEGSLSKGYLAVSGLLQSRA*EAGRWA Trigger: AGCCCACCTGCCTGCCTCCCAAGCTCTGCTCTGTAA...CAAGCCTGAAACAGCCAAGTAGCCCTTAGAAAGGCTTCCTTCACACAGAGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR CCA 90 bp | CTTTGTCCATGGGAAATCCCTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAAGTGTGAAGGAAAGGAGTaGAAATGTGGAGATGGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: LCPWEIPAILPRELGVGKCEGKE*KCGDGG Trigger: CCCACCATCTCCACATTTCCACTCCTTTCCTTCACA...CTTGCCCACACCCAGCTCCCTGGGCAGGATTGCAGGGATTTCCCATGGACAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR CAA 90 bp | CTACACGGAAGACTTGAGATGTCGAAAGTACATCAGCCTTTTAGCTaGGAGGTGGGAGCCATGCCCAGGATCCCTTTCCCGGGCTTTGTC | + |
|
Preference number: 2 (lower is better) Translates to: LHGRLEMSKVHQPFS*EVGAMPRIPFPGFV Trigger: GACAAAGCCCGGGAAAGGGATCCTGGGCATGGCTCCCACCTCCAAGCTAAAAGGCTGATGTACTTTCGACATCTCAAGTCTTCCGTGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR GCA 90 bp | CTTTGTCCATGGGAAATCCCTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAAGGATGTGGGTTTAAGCTaGTACACGGAAGACTTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: LCPWEIPAILPRELGVGKDVGLS*YTEDLR Trigger: TCTCAAGTCTTCCGTGTAGCAGCTTAAACCCACATC...CTTGCCCACACCCAGCTCCCTGGGCAGGATTGCAGGGATTTCCCATGGACAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR CCA 90 bp | GGGAAATCCCTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAAGTCTGAGCATGCTGCAATATTCACATTaGTTCCACTGTCCCTCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: GKSLQSCPGSWVWASLSMLQYSH*FHCPSL Trigger: AAGAGAGGGACAGTGGAACCAATGTGAATATTGCAG...CATGCTCAGACTTGCCCACACCCAGCTCCCTGGGCAGGATTGCAGGGATTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR CCA 90 bp | GGGAAATCCCTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAAGTCTGAGCATGAATATTGGTGGCAATTaGCGCAGGAACACAAAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: GKSLQSCPGSWVWASLSMNIGGN*RRNTKF Trigger: GAACTTTGTGTTCCTGCGCCAATTGCCACCAATATT...CATGCTCAGACTTGCCCACACCCAGCTCCCTGGGCAGGATTGCAGGGATTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR CCA 90 bp | GGCTTTGTCCATGGGAAATCCCTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAAATATTGGTGGCAATTaGCGCAGGAACACAAAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: GFVHGKSLQSCPGSWVWANIGGN*RRNTKF Trigger: GAACTTTGTGTTCCTGCGCCAATTGCCACCAATATT...TGCCCACACCCAGCTCCCTGGGCAGGATTGCAGGGATTTCCCATGGACAAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR CCA 90 bp | GGCTTTGTCCATGGGAAATCCCTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAGGCTGTGTTTACTTCTaGTATTCACCTTCACTAAGG | + |
|
Preference number: 2 (lower is better) Translates to: GFVHGKSLQSCPGSWVWAGCVYF*YSPSLR Trigger: CCTTAGTGAAGGTGAATACCAGAAGTAAACACAGCC...TGCCCACACCCAGCTCCCTGGGCAGGATTGCAGGGATTTCCCATGGACAAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR GCA 90 bp | CACGGAAGACTTGAGATGTCGAAAGTACATCAGCCTTTTAGCTTGGAGGTGGGAGCCACCTTGGAGATATaGACACCCTGCTCTGTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: HGRLEMSKVHQPFSLEVGATLEI*TPCSVA Trigger: GGCCACAGAGCAGGGTGTGCATATCTCCAAGGTGGC...TCCCACCTCCAAGCTAAAAGGCTGATGTACTTTCGACATCTCAAGTCTTCCGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114464.9 |
||
| 3UTR-3UTR CCA 90 bp | AGAAGGAGAGGAGGTAGGGCCTGGAAGCAATGCAAATACCAGCTTAGTTGTGGGATGGGTCCTGGGCACTaGAAAGAAGGAGAGGAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: RRRGGRAWKQCKYQLSCGMGPGH*KEGEEV Trigger: TACCTCCTCTCCTTCTTTCCAGTGCCCAGGACCCAT...CCCACAACTAAGCTGGTATTTGCATTGCTTCCAGGCCCTACCTCCTCTCCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 ENSMUST00000114467.9 |
||
| 3UTR-3UTR CCA 90 bp | CCAGCTCTGTGTGAAGGAAGCCTTTCTAAGGGCTACTTGGCTGTTTCAGGCTTGCTAGGAGATGGGTCCTaGGCACTGGAAAGAAGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: PALCEGSLSKGYLAVSGLLGDGS*ALERRR Trigger: TCTCCTTCTTTCCAGTGCCCAGGACCCATCTCCTAG...CAAGCCTGAAACAGCCAAGTAGCCCTTAGAAAGGCTTCCTTCACACAGAGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR CCA 90 bp | CACGGAAGACTTGAGATGTCGAAAGTACATCAGCCTTTTAGCTTGGAGGTGGGAGGCAAGGCTAGGAGATaGGTCCTGGGCACTGGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: HGRLEMSKVHQPFSLEVGGKARR*VLGTGK Trigger: CTTTCCAGTGCCCAGGACCCATCTCCTAGCCTTGCC...TCCCACCTCCAAGCTAAAAGGCTGATGTACTTTCGACATCTCAAGTCTTCCGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR TCA 90 bp | AGAAGGAGAGGAGGTAGGGCCTGGAAGCAATGCAAATACCAGCTTAGTTGTGGGTCTTTCCTGTTGACTTaGCCCCCTTCCACACACAGA | + |
|
Preference number: 2 (lower is better) Translates to: RRRGGRAWKQCKYQLSCGSFLLT*PPSTHR Trigger: TCTGTGTGTGGAAGGGGGTCAAGTCAACAGGAAAGA...CCCACAACTAAGCTGGTATTTGCATTGCTTCCAGGCCCTACCTCCTCTCCTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114464.9 |
||
| 3UTR-3UTR GCA 90 bp | CACGGAAGACTTGAGATGTCGAAAGTACATCAGCCTTTTAGCTTGGAGGTGGGAGAGATATGCACACCCTaGTCTGTGGCCATGAAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: HGRLEMSKVHQPFSLEVGEICTP*SVAMKP Trigger: GGGCTTCATGGCCACAGAGCAGGGTGTGCATATCTC...TCCCACCTCCAAGCTAAAAGGCTGATGTACTTTCGACATCTCAAGTCTTCCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114464.9 |
||
| 3UTR-3UTR CCA 90 bp | CCAGCTCTGTGTGAAGGAAGCCTTTCTAAGGGCTACTTGGCTGTTTCAGGCTTGAAGTTGGGGCTGCTATaGCTACCAAAGGATGAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: PALCEGSLSKGYLAVSGLKLGLL*LPKDEL Trigger: CAGCTCATCCTTTGGTAGCCATAGCAGCCCCAACTT...CAAGCCTGAAACAGCCAAGTAGCCCTTAGAAAGGCTTCCTTCACACAGAGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR CCA 90 bp | CATGGGAAATCCCTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAAGTCTGAGCGAAATGTGGAGATGGTaGGGGCTTTTTAGAAATATA | + |
|
Preference number: 2 (lower is better) Translates to: HGKSLQSCPGSWVWASLSEMWRW*GLFRNI Trigger: TATATTTCTAAAAAGCCCCCACCATCTCCACATTTC...GCTCAGACTTGCCCACACCCAGCTCCCTGGGCAGGATTGCAGGGATTTCCCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR CCA 90 bp | GGCTTTGTCCATGGGAAATCCCTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAGAAATGTGGAGATGGTaGGGGCTTTTTAGAAATATA | + |
|
Preference number: 2 (lower is better) Translates to: GFVHGKSLQSCPGSWVWAEMWRW*GLFRNI Trigger: TATATTTCTAAAAAGCCCCCACCATCTCCACATTTC...TGCCCACACCCAGCTCCCTGGGCAGGATTGCAGGGATTTCCCATGGACAAAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR CAA 90 bp | TCCTACCTTATTTTCCCTCCTCTCCTGTTACCCAAGCTGCCACTGTaGTTTCTAGGGCAAAGGTATGTTACAGAGCAGAGCTTGGGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: SYLIFPPLLLPKLPL*FLGQRYVTEQSLGG Trigger: GCCTCCCAAGCTCTGCTCTGTAACATACCTTTGCCCTAGAAACAACAGTGGCAGCTTGGGTAACAGGAGAGGAGGGAAAATAAGGTAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 ENSMUST00000114467.9 |
||
| 3UTR-3UTR CCA 90 bp | CACGGAAGACTTGAGATGTCGAAAGTACATCAGCCTTTTAGCTTGGAGGTGGGAATGGGTCCTGGGCACTaGAAAGAAGGAGAGGAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: HGRLEMSKVHQPFSLEVGMGPGH*KEGEEV Trigger: TACCTCCTCTCCTTCTTTCCAGTGCCCAGGACCCAT...TCCCACCTCCAAGCTAAAAGGCTGATGTACTTTCGACATCTCAAGTCTTCCGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR CCA 90 bp | AGAAGGAGAGGAGGTAGGGCCTGGAAGCAATGCAAATACCAGCTTAGTTGTGGGTGTGAAGGAAAGGAGTaGAAATGTGGAGATGGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: RRRGGRAWKQCKYQLSCGCEGKE*KCGDGG Trigger: CCCACCATCTCCACATTTCCACTCCTTTCCTTCACA...CCCACAACTAAGCTGGTATTTGCATTGCTTCCAGGCCCTACCTCCTCTCCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR CCA 90 bp | CACGGAAGACTTGAGATGTCGAAAGTACATCAGCCTTTTAGCTTGGAGGTGGGAAAGTTGGGGCTGCTATaGCTACCAAAGGATGAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: HGRLEMSKVHQPFSLEVGKLGLL*LPKDEL Trigger: CAGCTCATCCTTTGGTAGCCATAGCAGCCCCAACTT...TCCCACCTCCAAGCTAAAAGGCTGATGTACTTTCGACATCTCAAGTCTTCCGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR CCA 90 bp | CACGGAAGACTTGAGATGTCGAAAGTACATCAGCCTTTTAGCTTGGAGGTGGGACAGACCCAGATTCCCTaGAACAGTGTTACAGCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: HGRLEMSKVHQPFSLEVGQTQIP*NSVTAF Trigger: GAAGGCTGTAACACTGTTCCAGGGAATCTGGGTCTG...TCCCACCTCCAAGCTAAAAGGCTGATGTACTTTCGACATCTCAAGTCTTCCGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR CCA 90 bp | CCAGCTCTGTGTGAAGGAAGCCTTTCTAAGGGCTACTTGGCTGTTTCAGGCTTGCTGCAATATTCACATTaGTTCCACTGTCCCTCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: PALCEGSLSKGYLAVSGLLQYSH*FHCPSL Trigger: AAGAGAGGGACAGTGGAACCAATGTGAATATTGCAG...CAAGCCTGAAACAGCCAAGTAGCCCTTAGAAAGGCTTCCTTCACACAGAGCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR GCA 90 bp | CACGGAAGACTTGAGATGTCGAAAGTACATCAGCCTTTTAGCTTGGAGGTGGGAAGGGCCTGGAAGCAATaGAAATACCAGCTTAGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: HGRLEMSKVHQPFSLEVGRAWKQ*KYQLSC Trigger: ACAACTAAGCTGGTATTTGCATTGCTTCCAGGCCCT...TCCCACCTCCAAGCTAAAAGGCTGATGTACTTTCGACATCTCAAGTCTTCCGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR CCA 90 bp | AAGGAGTGGAAATGTGGAGATGGTGGGGGCTTTTTAGAAATATACAAGCAGAAGCTAGGAGATGGGTCCTaGGCACTGGAAAGAAGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: KEWKCGDGGGFLEIYKQKLGDGS*ALERRR Trigger: TCTCCTTCTTTCCAGTGCCCAGGACCCATCTCCTAG...CTTCTGCTTGTATATTTCTAAAAAGCCCCCACCATCTCCACATTTCCACTCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGAAATCCCTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAAGTCTGAGCATGGGCAGGCAGGTGGGCTaGGCAAGGCTAGGAGATGGG | + |
|
Preference number: 3 (lower is better) Translates to: GKSLQSCPGSWVWASLSMGRQVG*ARLGDG Trigger: CCCATCTCCTAGCCTTGCCAAGCCCACCTGCCTGCC...CATGCTCAGACTTGCCCACACCCAGCTCCCTGGGCAGGATTGCAGGGATTTCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAAGTCTGAGCATGTCAGGTGAGGTTACAGAGCAGAGCTaGGGAGGCAGGCAGGTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: LQSCPGSWVWASLSMSGEVTEQS*GGRQVG Trigger: GCCCACCTGCCTGCCTCCCAAGCTCTGCTCTGTAAC...CTCACCTGACATGCTCAGACTTGCCCACACCCAGCTCCCTGGGCAGGATTGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR GCA 72 bp | GGATCCCTTTCCCGGGCTTTGTCCATGGGAAATCCCTaGAATCCTGCCCAGGGAGCTGGGTGTGGGCAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: GSLSRALSMGNP*NPAQGAGCGQV Trigger: GACTTGCCCACACCCAGCTCCCTGGGCAGGATTGCAGGGATTTCCCATGGACAAAGCCCGGGAAAGGGATCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR CCA 72 bp | GGGAAATCCCTGCAATCCTGCCCAGGGAGCTGGGTGTaGGCAAGTCTGAGCATGTCAGGTGAGCAGACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GKSLQSCPGSWV*ASLSMSGEQTQ Trigger: CTGGGTCTGCTCACCTGACATGCTCAGACTTGCCCACACCCAGCTCCCTGGGCAGGATTGCAGGGATTTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR CCA 72 bp | AGCCATGCCCAGGATCCCTTTCCCGGGCTTTGTCCATaGGAAATCCCTGCAATCCTGCCCAGGGAGCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SHAQDPFPGLCP*EIPAILPRELG Trigger: ACCCAGCTCCCTGGGCAGGATTGCAGGGATTTCCCATGGACAAAGCCCGGGAAAGGGATCCTGGGCATGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR CAA 90 bp | CATGGGAAATCCCTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAAGTCTGAGCCATCAGCCTTTTAGCTaGGAGGTGGGAGCCATGCCC | + |
|
Preference number: 3 (lower is better) Translates to: HGKSLQSCPGSWVWASLSHQPFS*EVGAMP Trigger: GGGCATGGCTCCCACCTCCAAGCTAAAAGGCTGATG...GCTCAGACTTGCCCACACCCAGCTCCCTGGGCAGGATTGCAGGGATTTCCCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR TCA 72 bp | TGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAAGTCTaGGCATGTCAGGTGAGCAGACCCAGATTCCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: CNPAQGAGCGQV*ACQVSRPRFPG Trigger: TCCAGGGAATCTGGGTCTGCTCACCTGACATGCTCAGACTTGCCCACACCCAGCTCCCTGGGCAGGATTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR GCA 72 bp | TTCCCGGGCTTTGTCCATGGGAAATCCCTGCAATCCTaGCCAGGGAGCTGGGTGTGGGCAAGTCTGAGCATG | + |
|
Preference number: 3 (lower is better) Translates to: FPGFVHGKSLQS*PGSWVWASLSM Trigger: CATGCTCAGACTTGCCCACACCCAGCTCCCTGGGCAGGATTGCAGGGATTTCCCATGGACAAAGCCCGGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR CAA 90 bp | CTTTGTCCATGGGAAATCCCTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAAGAGTGTGGGGACACCATaGAGGCTCCCACTTTCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: LCPWEIPAILPRELGVGKSVGTP*RLPLSH Trigger: GTGGGAAAGTGGGAGCCTCAATGGTGTCCCCACACT...CTTGCCCACACCCAGCTCCCTGGGCAGGATTGCAGGGATTTCCCATGGACAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR CAA 90 bp | CTTTGTCCATGGGAAATCCCTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAAGCATCAGCCTTTTAGCTaGGAGGTGGGAGCCATGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LCPWEIPAILPRELGVGKHQPFS*EVGAMP Trigger: GGGCATGGCTCCCACCTCCAAGCTAAAAGGCTGATG...CTTGCCCACACCCAGCTCCCTGGGCAGGATTGCAGGGATTTCCCATGGACAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAAGTCTGAGCATGTCAGGTGAGTTGGCTGTTTCAGGCTaGATGGGACACAGATGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LQSCPGSWVWASLSMSGELAVSG*MGHRCG Trigger: CCCACATCTGTGTCCCATCAAGCCTGAAACAGCCAA...CTCACCTGACATGCTCAGACTTGCCCACACCCAGCTCCCTGGGCAGGATTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR CAA 90 bp | CATGGGAAATCCCTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAAGTCTGAGCTTGGCTGTTTCAGGCTaGATGGGACACAGATGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: HGKSLQSCPGSWVWASLSLAVSG*MGHRCG Trigger: CCCACATCTGTGTCCCATCAAGCCTGAAACAGCCAA...GCTCAGACTTGCCCACACCCAGCTCCCTGGGCAGGATTGCAGGGATTTCCCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR CAA 90 bp | CATGGGAAATCCCTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAAGTCTGAGCCCCAAGCTGCCACTGTaGTTTCTAGGGCAAAGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: HGKSLQSCPGSWVWASLSPKLPL*FLGQRY Trigger: ATACCTTTGCCCTAGAAACAACAGTGGCAGCTTGGG...GCTCAGACTTGCCCACACCCAGCTCCCTGGGCAGGATTGCAGGGATTTCCCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR TCA 72 bp | GGGCTGCTATGGCTACCAAAGGATGAGCTGGTGATGTaGGCTGGGGGTGCCTGTTACATGACACTCTCCACC | + |
|
Preference number: 3 (lower is better) Translates to: GLLWLPKDELVM*AGGACYMTLST Trigger: GGTGGAGAGTGTCATGTAACAGGCACCCCCAGCTCACATCACCAGCTCATCCTTTGGTAGCCATAGCAGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114464.9 |
||
| 3UTR-3UTR CAA 90 bp | CACGGAAGACTTGAGATGTCGAAAGTACATCAGCCTTTTAGCTTGGAGGTGGGAGGCAGGCAGGTGGGCTaGGCAAGGCTAGGAGATGGG | + |
|
Preference number: 3 (lower is better) Translates to: HGRLEMSKVHQPFSLEVGGRQVG*ARLGDG Trigger: CCCATCTCCTAGCCTTGCCAAGCCCACCTGCCTGCC...TCCCACCTCCAAGCTAAAAGGCTGATGTACTTTCGACATCTCAAGTCTTCCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR CAA 90 bp | CTTTGTCCATGGGAAATCCCTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAAGCTTTCTAAGGGCTACTaGGCTGTTTCAGGCTTGATG | + |
|
Preference number: 3 (lower is better) Translates to: LCPWEIPAILPRELGVGKLSKGY*AVSGLM Trigger: CATCAAGCCTGAAACAGCCAAGTAGCCCTTAGAAAG...CTTGCCCACACCCAGCTCCCTGGGCAGGATTGCAGGGATTTCCCATGGACAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGGAGTGGAAATGTGGAGATGGTGGGGGCTTTTTAGAAATATACAAGCAGAAGGGCAGGCAGGTGGGCTaGGCAAGGCTAGGAGATGGG | + |
|
Preference number: 3 (lower is better) Translates to: KEWKCGDGGGFLEIYKQKGRQVG*ARLGDG Trigger: CCCATCTCCTAGCCTTGCCAAGCCCACCTGCCTGCC...CTTCTGCTTGTATATTTCTAAAAAGCCCCCACCATCTCCACATTTCCACTCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCTCTGTGTGAAGGAAGCCTTTCTAAGGGCTACTTGGCTGTTTCAGGCTTGGAACACAAAGTTCCATaGCTGACTGGCTCTCTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: PALCEGSLSKGYLAVSGLEHKVP*LTGSLA Trigger: AGCTAGAGAGCCAGTCAGCAATGGAACTTTGTGTTC...CAAGCCTGAAACAGCCAAGTAGCCCTTAGAAAGGCTTCCTTCACACAGAGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| CDS-3UTR CCA 90 bp | GGCAGACCCCCAAACTGTCAAGGAAAGGCAAGCCCCCGGAGGGATGAGTGGGGGGCCATCGCCCTTGGCTaGGGCACCGTCGGGCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GRPPNCQGKASPRRDEWGAIALG*GTVGPG Trigger: TCCGGGCCCGACGGTGCCCCAGCCAAGGGCGATGGC...CCCCCACTCATCCCTCCGGGGGCTTGCCTTTCCTTGACAGTTTGGGGGTCTGCC 69% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000033752.14 ENSMUST00000114465.9 ENSMUST00000114467.9 ENSMUST00000164449.8 |
||
| CDS-3UTR CCA 90 bp | CATGGGAAATCCCTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAAGTCTGAGCGCCATCGCCCTTGGCTaGGGCACCGTCGGGCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: HGKSLQSCPGSWVWASLSAIALG*GTVGPG Trigger: TCCGGGCCCGACGGTGCCCCAGCCAAGGGCGATGGC...GCTCAGACTTGCCCACACCCAGCTCCCTGGGCAGGATTGCAGGGATTTCCCATG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033752.14 ENSMUST00000114465.9 |
||
| CDS-3UTR CCA 90 bp | CTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAAGTCTGAGCATGTCAGGTGAGGCCATCGCCCTTGGCTaGGGCACCGTCGGGCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LQSCPGSWVWASLSMSGEAIALG*GTVGPG Trigger: TCCGGGCCCGACGGTGCCCCAGCCAAGGGCGATGGC...CTCACCTGACATGCTCAGACTTGCCCACACCCAGCTCCCTGGGCAGGATTGCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033752.14 ENSMUST00000114465.9 |
||
| CDS-3UTR CCA 90 bp | GGTGGGCTTGGCAAGGCTAGGAGATGGGTCCTGGGCACTGGAAAGAAGGAGAGGGCCATCGCCCTTGGCTaGGGCACCGTCGGGCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GGLGKARRWVLGTGKKERAIALG*GTVGPG Trigger: TCCGGGCCCGACGGTGCCCCAGCCAAGGGCGATGGC...CCTCTCCTTCTTTCCAGTGCCCAGGACCCATCTCCTAGCCTTGCCAAGCCCACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114465.9 ENSMUST00000114467.9 |
||
| CDS-3UTR TCA 90 bp | GGCAGACCCCCAAACTGTCAAGGAAAGGCAAGCCCCCGGAGGGATGAGTGGGGGCGGGCCCGGACACGATaGGAGGACCCTTCTTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: GRPPNCQGKASPRRDEWGRARTR*EDPSSR Trigger: ACGAGAAGAAGGGTCCTCTCATCGTGTCCGGGCCCG...CCCCCACTCATCCCTCCGGGGGCTTGCCTTTCCTTGACAGTTTGGGGGTCTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000033752.14 ENSMUST00000114465.9 ENSMUST00000114467.9 ENSMUST00000164449.8 |
||
| CDS-3UTR TCA 90 bp | CTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAAGTCTGAGCATGTCAGGTGAGCGGGCCCGGACACGATaGGAGGACCCTTCTTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LQSCPGSWVWASLSMSGERARTR*EDPSSR Trigger: ACGAGAAGAAGGGTCCTCTCATCGTGTCCGGGCCCG...CTCACCTGACATGCTCAGACTTGCCCACACCCAGCTCCCTGGGCAGGATTGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033752.14 ENSMUST00000114465.9 |
||
| CDS-3UTR TCA 90 bp | CATGGGAAATCCCTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAAGTCTGAGCCGGGCCCGGACACGATaGGAGGACCCTTCTTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: HGKSLQSCPGSWVWASLSRARTR*EDPSSR Trigger: ACGAGAAGAAGGGTCCTCTCATCGTGTCCGGGCCCG...GCTCAGACTTGCCCACACCCAGCTCCCTGGGCAGGATTGCAGGGATTTCCCATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033752.14 ENSMUST00000114465.9 |
||
| CDS-3UTR TCA 90 bp | GGCAGACCCCCAAACTGTCAAGGAAAGGCAAGCCCCCGGAGGGATGAGTGGGGGCGAGCAGCAGCAGCATaGAGAAGAACAAGGCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GRPPNCQGKASPRRDEWGRAAAA*RRTRQP Trigger: GGGCTGCCTTGTTCTTCTTCATGCTGCTGCTGCTCG...CCCCCACTCATCCCTCCGGGGGCTTGCCTTTCCTTGACAGTTTGGGGGTCTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 5 transcripts: ENSMUST00000033752.14 ENSMUST00000114465.9 ENSMUST00000114467.9 ENSMUST00000164449.8 ENSMUST00000168831.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGACCCCCAAACTGTCAAGGAAAGGCAAGCCCCCGGAGGGATGAGTGGGGGATAGGCTGGGTCAGGTaGTGCCATCGCTCTGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: GRPPNCQGKASPRRDEWGIGWVR*CHRSAM Trigger: CATGGCAGAGCGATGGCAGCACCTGACCCAGCCTAT...CCCCCACTCATCCCTCCGGGGGCTTGCCTTTCCTTGACAGTTTGGGGGTCTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 5 transcripts: ENSMUST00000033752.14 ENSMUST00000114465.9 ENSMUST00000114467.9 ENSMUST00000164449.8 ENSMUST00000168831.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGACCCCCAAACTGTCAAGGAAAGGCAAGCCCCCGGAGGGATGAGTGGGGGGAGATATGCACACCCTaGTCTGTGGCCATGAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GRPPNCQGKASPRRDEWGEICTP*SVAMKP Trigger: GGGCTTCATGGCCACAGAGCAGGGTGTGCATATCTC...CCCCCACTCATCCCTCCGGGGGCTTGCCTTTCCTTGACAGTTTGGGGGTCTGCC 61% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000033752.14 ENSMUST00000114465.9 ENSMUST00000114467.9 ENSMUST00000164449.8 ENSMUST00000168831.8 |
||
| CDS-3UTR TCA 90 bp | CCAAACTGTCAAGGAAAGGCAAGCCCCCGGAGGGATGAGTGGGGGCTAAAGTTGCGGGCCCGGACACGATaGGAGGACCCTTCTTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PNCQGKASPRRDEWGLKLRARTR*EDPSSR Trigger: ACGAGAAGAAGGGTCCTCTCATCGTGTCCGGGCCCG...CAACTTTAGCCCCCACTCATCCCTCCGGGGGCTTGCCTTTCCTTGACAGTTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000033752.14 ENSMUST00000114465.9 ENSMUST00000114467.9 ENSMUST00000164449.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTTGTCCATGGGAAATCCCTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAATAGGCTGGGTCAGGTaGTGCCATCGCTCTGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: GFVHGKSLQSCPGSWVWAIGWVR*CHRSAM Trigger: CATGGCAGAGCGATGGCAGCACCTGACCCAGCCTAT...TGCCCACACCCAGCTCCCTGGGCAGGATTGCAGGGATTTCCCATGGACAAAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033752.14 ENSMUST00000114465.9 |
||
| CDS-3UTR GCA 90 bp | CTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAAGTCTGAGCATGTCAGGTGAGATAGGCTGGGTCAGGTaGTGCCATCGCTCTGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LQSCPGSWVWASLSMSGEIGWVR*CHRSAM Trigger: CATGGCAGAGCGATGGCAGCACCTGACCCAGCCTAT...CTCACCTGACATGCTCAGACTTGCCCACACCCAGCTCCCTGGGCAGGATTGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033752.14 ENSMUST00000114465.9 |
||
| CDS-3UTR GCA 90 bp | GGTGGGCTTGGCAAGGCTAGGAGATGGGTCCTGGGCACTGGAAAGAAGGAGAGGATAGGCTGGGTCAGGTaGTGCCATCGCTCTGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: GGLGKARRWVLGTGKKERIGWVR*CHRSAM Trigger: CATGGCAGAGCGATGGCAGCACCTGACCCAGCCTAT...CCTCTCCTTCTTTCCAGTGCCCAGGACCCATCTCCTAGCCTTGCCAAGCCCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114465.9 ENSMUST00000114467.9 |
||
| CDS-3UTR TCA 90 bp | AACTGTCAAGGAAAGGCAAGCCCCCGGAGGGATGAGTGGGGGCTAAAGTTGGGGCGAGCAGCAGCAGCATaGAGAAGAACAAGGCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NCQGKASPRRDEWGLKLGRAAAA*RRTRQP Trigger: GGGCTGCCTTGTTCTTCTTCATGCTGCTGCTGCTCG...CCCCAACTTTAGCCCCCACTCATCCCTCCGGGGGCTTGCCTTTCCTTGACAGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000033752.14 ENSMUST00000114465.9 ENSMUST00000114467.9 ENSMUST00000164449.8 ENSMUST00000168831.8 |
||
| CDS-3UTR GCA 90 bp | AACTGTCAAGGAAAGGCAAGCCCCCGGAGGGATGAGTGGGGGCTAAAGTTGGGGATAGGCTGGGTCAGGTaGTGCCATCGCTCTGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: NCQGKASPRRDEWGLKLGIGWVR*CHRSAM Trigger: CATGGCAGAGCGATGGCAGCACCTGACCCAGCCTAT...CCCCAACTTTAGCCCCCACTCATCCCTCCGGGGGCTTGCCTTTCCTTGACAGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000033752.14 ENSMUST00000114465.9 ENSMUST00000114467.9 ENSMUST00000164449.8 ENSMUST00000168831.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGACCCCCAAACTGTCAAGGAAAGGCAAGCCCCCGGAGGGATGAGTGGGGGAGCCAGCAAAGAAGCTaGTCCCGTTGTAGCAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GRPPNCQGKASPRRDEWGSQQRS*SRCSSC Trigger: ACAACTGCTACAACGGGACCAGCTTCTTTGCTGGCT...CCCCCACTCATCCCTCCGGGGGCTTGCCTTTCCTTGACAGTTTGGGGGTCTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000164449.8 |
||
| CDS-3UTR GCA 90 bp | AACTGTCAAGGAAAGGCAAGCCCCCGGAGGGATGAGTGGGGGCTAAAGTTGGGGGAGATATGCACACCCTaGTCTGTGGCCATGAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NCQGKASPRRDEWGLKLGEICTP*SVAMKP Trigger: GGGCTTCATGGCCACAGAGCAGGGTGTGCATATCTC...CCCCAACTTTAGCCCCCACTCATCCCTCCGGGGGCTTGCCTTTCCTTGACAGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 5 transcripts: ENSMUST00000033752.14 ENSMUST00000114465.9 ENSMUST00000114467.9 ENSMUST00000164449.8 ENSMUST00000168831.8 |
||
| CDS-3UTR TCA 90 bp | CTGCAATCCTGCCCAGGGAGCTGGGTGTGGGCAAGTCTGAGCATGTCAGGTGAGTCTTTCCTGTTGACTTaGCCCCCTTCCACACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LQSCPGSWVWASLSMSGESFLLT*PPSTHR Trigger: TCTGTGTGTGGAAGGGGGTCAAGTCAACAGGAAAGA...CTCACCTGACATGCTCAGACTTGCCCACACCCAGCTCCCTGGGCAGGATTGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033752.14 ENSMUST00000114465.9 |
||
| CDS-3UTR GCA 90 bp | CCAAACTGTCAAGGAAAGGCAAGCCCCCGGAGGGATGAGTGGGGGCTAAAGTTGGAGATATGCACACCCTaGTCTGTGGCCATGAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PNCQGKASPRRDEWGLKLEICTP*SVAMKP Trigger: GGGCTTCATGGCCACAGAGCAGGGTGTGCATATCTC...CAACTTTAGCCCCCACTCATCCCTCCGGGGGCTTGCCTTTCCTTGACAGTTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000033752.14 ENSMUST00000114465.9 ENSMUST00000114467.9 ENSMUST00000164449.8 ENSMUST00000168831.8 |
||
| 3UTR CAA 72 bp | GCAATGAAGGCTAGACCAGGCCCTGATTCTGCCACCTaGGAGATATGCACACCCTGCTCTGTGGCCATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AMKARPGPDSAT*EICTPCSVAMK Trigger: CTTCATGGCCACAGAGCAGGGTGTGCATATCTCCAAGGTGGCAGAATCAGGGCCTGGTCTAGCCTTCATTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114464.9 |
||
| CDS-3UTR TCA 90 bp | AGAAGGAGAGGAGGTAGGGCCTGGAAGCAATGCAAATACCAGCTTAGTTGTGGGCGAGCAGCAGCAGCATaGAGAAGAACAAGGCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RRRGGRAWKQCKYQLSCGRAAAA*RRTRQP Trigger: GGGCTGCCTTGTTCTTCTTCATGCTGCTGCTGCTCG...CCCACAACTAAGCTGGTATTTGCATTGCTTCCAGGCCCTACCTCCTCTCCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114465.9 ENSMUST00000114467.9 |
||
| CDS-3UTR GCA 90 bp | AGAAGGAGAGGAGGTAGGGCCTGGAAGCAATGCAAATACCAGCTTAGTTGTGGGGCCACCTTGGAGATATaGACACCCTGCTCTGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RRRGGRAWKQCKYQLSCGATLEI*TPCSVA Trigger: GGCCACAGAGCAGGGTGTGCATATCTCCAAGGTGGC...CCCACAACTAAGCTGGTATTTGCATTGCTTCCAGGCCCTACCTCCTCTCCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114465.9 ENSMUST00000114467.9 |
||
| CDS-3UTR GCA 90 bp | AGAAGGAGAGGAGGTAGGGCCTGGAAGCAATGCAAATACCAGCTTAGTTGTGGGGAGATATGCACACCCTaGTCTGTGGCCATGAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RRRGGRAWKQCKYQLSCGEICTP*SVAMKP Trigger: GGGCTTCATGGCCACAGAGCAGGGTGTGCATATCTC...CCCACAACTAAGCTGGTATTTGCATTGCTTCCAGGCCCTACCTCCTCTCCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114465.9 ENSMUST00000114467.9 |
||
| CDS-3UTR CCA 90 bp | AAGGAGTGGAAATGTGGAGATGGTGGGGGCTTTTTAGAAATATACAAGCAGAAGCCAAGTCTCTCGCGGTaGCACTGCAAGGCGGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: KEWKCGDGGGFLEIYKQKPSLSR*HCKAAA Trigger: GGCGGCCGCCTTGCAGTGCCACCGCGAGAGACTTGG...CTTCTGCTTGTATATTTCTAAAAAGCCCCCACCATCTCCACATTTCCACTCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033752.14 ENSMUST00000114465.9 |
||
| 3UTR CAA 72 bp | CCAGCTCTGTGTGAAGGAAGCCTTTCTAAGGGCTACTaGGCTGTTTCAGGCTTGATGGGACACAGATGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PALCEGSLSKGY*AVSGLMGHRCG Trigger: CCCACATCTGTGTCCCATCAAGCCTGAAACAGCCAAGTAGCCCTTAGAAAGGCTTCCTTCACACAGAGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 |
||
| 3UTR CAA 72 bp | ATTTTCCCTCCTCTCCTGTTACCCAAGCTGCCACTGTaGTTTCTAGGGCAAAGGTATGTTACAGAGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IFPPLLLPKLPL*FLGQRYVTEQS Trigger: GCTCTGCTCTGTAACATACCTTTGCCCTAGAAACAACAGTGGCAGCTTGGGTAACAGGAGAGGAGGGAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033752.14 ENSMUST00000114464.9 ENSMUST00000114465.9 ENSMUST00000114467.9 |
||
| CDS CCA 90 bp | GCGGCCGCCAGGCGCCCCCAGGCCCGCAGGGCCATCGCCCTTGGCTaGGGCACCGTCGGGCCCGGACACGATGAGAGGACCCTTCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: AAARRPQARRAIALG*GTVGPGHDERTLLL Trigger: GAGAAGAAGGGTCCTCTCATCGTGTCCGGGCCCGACGGTGCCCCAGCCAAGGGCGATGGCCCTGCGGGCCTGGGGGCGCCTGGCGGCCGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033752.14 ENSMUST00000114465.9 ENSMUST00000114467.9 ENSMUST00000164449.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGACCCCCAAACTGTCAAGGAAAGGCAAGCCCCCGGAGGGATGAGTGGGGGGCAGGGCCATCGCCCTaGGCTGGGGCACCGTCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GRPPNCQGKASPRRDEWGAGPSP*AGAPSG Trigger: GCCCGACGGTGCCCCAGCCAAGGGCGATGGCCCTGC...CCCCCACTCATCCCTCCGGGGGCTTGCCTTTCCTTGACAGTTTGGGGGTCTGCC 70% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt. Matches the following 4 transcripts: ENSMUST00000033752.14 ENSMUST00000114465.9 ENSMUST00000114467.9 ENSMUST00000164449.8 |
||
| CDS TCA 90 bp | CAGGGCCATCGCCCTTGGCTGGGGCACCGTCGGGCCCGGACACGATaGGAGGACCCTTCTTCTCGTCACCAGACACGCTATAGATACCGT | + |
|
Preference number: 5 (lower is better) Translates to: QGHRPWLGHRRARTR*EDPSSRHQTRYRYR Trigger: ACGGTATCTATAGCGTGTCTGGTGACGAGAAGAAGGGTCCTCTCATCGTGTCCGGGCCCGACGGTGCCCCAGCCAAGGGCGATGGCCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033752.14 ENSMUST00000114465.9 ENSMUST00000114467.9 ENSMUST00000164449.8 |
||
| CDS-3UTR CAA 90 bp | AGAAGGAGAGGAGGTAGGGCCTGGAAGCAATGCAAATACCAGCTTAGTTGTGGGGCAGGGCCATCGCCCTaGGCTGGGGCACCGTCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RRRGGRAWKQCKYQLSCGAGPSP*AGAPSG Trigger: GCCCGACGGTGCCCCAGCCAAGGGCGATGGCCCTGC...CCCACAACTAAGCTGGTATTTGCATTGCTTCCAGGCCCTACCTCCTCTCCTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114465.9 ENSMUST00000114467.9 |
||
| CDS-3UTR CAA 90 bp | AGGAAGGGTCTAATTCAGCTGCAATATTCACATTGGTTCCACTGTCCCTCTCTTGCAGGGCCATCGCCCTaGGCTGGGGCACCGTCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RKGLIQLQYSHWFHCPSLAGPSP*AGAPSG Trigger: GCCCGACGGTGCCCCAGCCAAGGGCGATGGCCCTGC...AAGAGAGGGACAGTGGAACCAATGTGAATATTGCAGCTGAATTAGACCCTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033752.14 ENSMUST00000114465.9 ENSMUST00000114467.9 |
||
| CDS-3UTR CAA 90 bp | AAGGAGTGGAAATGTGGAGATGGTGGGGGCTTTTTAGAAATATACAAGCAGAAGGCAGGGCCATCGCCCTaGGCTGGGGCACCGTCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KEWKCGDGGGFLEIYKQKAGPSP*AGAPSG Trigger: GCCCGACGGTGCCCCAGCCAAGGGCGATGGCCCTGC...CTTCTGCTTGTATATTTCTAAAAAGCCCCCACCATCTCCACATTTCCACTCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033752.14 ENSMUST00000114465.9 |
||
| CDS-3UTR CAA 90 bp | CCAGCTCTGTGTGAAGGAAGCCTTTCTAAGGGCTACTTGGCTGTTTCAGGCTTGGAGAGCCTCAATACTTaGTTCTCCCAGAACTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: PALCEGSLSKGYLAVSGLESLNT*FSQNSM Trigger: CATCGAGTTCTGGGAGAACAAAGTATTGAGGCTCTC...CAAGCCTGAAACAGCCAAGTAGCCCTTAGAAAGGCTTCCTTCACACAGAGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033752.14 ENSMUST00000114465.9 |
||
| CDS CAA 90 bp | GCAAGGCGGCCGCCAGGCGCCCCCAGGCCCGCAGGGCCATCGCCCTaGGCTGGGGCACCGTCGGGCCCGGACACGATGAGAGGACCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ARRPPGAPRPAGPSP*AGAPSGPDTMRGPF Trigger: GAAGGGTCCTCTCATCGTGTCCGGGCCCGACGGTGCCCCAGCCAAGGGCGATGGCCCTGCGGGCCTGGGGGCGCCTGGCGGCCGCCTTGC 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033752.14 ENSMUST00000114465.9 ENSMUST00000114467.9 ENSMUST00000164449.8 |
||
| CDS CCA 72 bp | AGGCGCCCCCAGGCCCGCAGGGCCATCGCCCTTGGCTaGGGCACCGTCGGGCCCGGACACGATGAGAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: RRPQARRAIALG*GTVGPGHDERT Trigger: GGTCCTCTCATCGTGTCCGGGCCCGACGGTGCCCCAGCCAAGGGCGATGGCCCTGCGGGCCTGGGGGCGCCT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033752.14 ENSMUST00000114465.9 ENSMUST00000114467.9 ENSMUST00000164449.8 |
||
| CDS TCA 72 bp | CGCCCTTGGCTGGGGCACCGTCGGGCCCGGACACGATaGGAGGACCCTTCTTCTCGTCACCAGACACGCTAT | + |
|
Preference number: 6 (lower is better) Translates to: RPWLGHRRARTR*EDPSSRHQTRY Trigger: ATAGCGTGTCTGGTGACGAGAAGAAGGGTCCTCTCATCGTGTCCGGGCCCGACGGTGCCCCAGCCAAGGGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033752.14 ENSMUST00000114465.9 ENSMUST00000114467.9 ENSMUST00000164449.8 |
||