Pregenerated sensors for SLC6A7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052026Ensembl transcript IDs: ENSMUST00000025520.10
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGGCCACACCTGAACAGCATCTCGCAGGGACCCAGGACAGAGGCTaGCCCCTGTCAGGTGCCCTGCAGCATCAGGATGTCCGACGTGTG | + |
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Preference number: 1 (lower is better) Translates to: WATPEQHLAGTQDRG*PLSGALQHQDVRRV Trigger: CACACGTCGGACATCCTGATGCTGCAGGGCACCTGACAGGGGGCAGCCTCTGTCCTGGGTCCCTGCGAGATGCTGTTCAGGTGTGGCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR GCA 90 bp | ACAGCATCTCGCAGGGACCCAGGACAGAGGCTGCCCCCTGTCAGGTaGCCTGCAGCATCAGGATGTCCGACGTGTGGACCACCTCAGAGT | + |
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Preference number: 1 (lower is better) Translates to: TASRRDPGQRLPPVR*PAASGCPTCGPPQS Trigger: ACTCTGAGGTGGTCCACACGTCGGACATCCTGATGCTGCAGGGCACCTGACAGGGGGCAGCCTCTGTCCTGGGTCCCTGCGAGATGCTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR TCA 90 bp | TGGGGAGAGGCCAGGAGAGAGGTCACTCTTAGGTCATATGCTGCATaGAACGTGCCCTGCTCTCCTGGGGAATGCAGTGCGTGGGCCACA | + |
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Preference number: 1 (lower is better) Translates to: WGEARREVTLRSYAA*NVPCSPGECSAWAT Trigger: TGTGGCCCACGCACTGCATTCCCCAGGAGAGCAGGGCACGTTTCATGCAGCATATGACCTAAGAGTGACCTCTCTCCTGGCCTCTCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR TCA 90 bp | GGAGTTGGCTGGCTGGAGGCTTGGGAACAGGTCCTCTTGGGCATGTaGCTTTGGTCCAGACCTTCTCTCCCTGGCTTCAACACATCCCTC | + |
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Preference number: 1 (lower is better) Translates to: GVGWLEAWEQVLLGM*LWSRPSLPGFNTSL Trigger: GAGGGATGTGTTGAAGCCAGGGAGAGAAGGTCTGGACCAAAGTCACATGCCCAAGAGGACCTGTTCCCAAGCCTCCAGCCAGCCAACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR TCA 90 bp | CTCTGCTCTGGCAGATTGGGCCTCCTCCTGGCCCAGCGGCAGCTCTaGCCCATAAGCCTTCCCTCCTGCATGTTCTGCAATCTTTCATCT | + |
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Preference number: 1 (lower is better) Translates to: LCSGRLGLLLAQRQL*PISLPSCMFCNLSS Trigger: AGATGAAAGATTGCAGAACATGCAGGAGGGAAGGCTTATGGGTCAGAGCTGCCGCTGGGCCAGGAGGAGGCCCAATCTGCCAGAGCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR GCA 90 bp | TCATTTCTCATTCCTATCCCCATGGTGGGAGCTCTTCAGGACGCCTaGCAGCCCAAGGATGGTATCCAAACGGTGAAGGGTGGGCTCTAC | + |
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Preference number: 1 (lower is better) Translates to: SFLIPIPMVGALQDA*QPKDGIQTVKGGLY Trigger: GTAGAGCCCACCCTTCACCGTTTGGATACCATCCTTGGGCTGGCAGGCGTCCTGAAGAGCTCCCACCATGGGGATAGGAATGAGAAATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR CCA 90 bp | AGAGAAAGGGAGTTGGCTGGCTGGAGGCTTGGGAACAGGTCCTCTTaGGCATGTGACTTTGGTCCAGACCTTCTCTCCCTGGCTTCAACA | + |
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Preference number: 1 (lower is better) Translates to: RERELAGWRLGNRSS*ACDFGPDLLSLAST Trigger: TGTTGAAGCCAGGGAGAGAAGGTCTGGACCAAAGTCACATGCCCAAGAGGACCTGTTCCCAAGCCTCCAGCCAGCCAACTCCCTTTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR CCA 90 bp | CACAGCGGCAAGGGAGAAAACTCTCATTTCTCATTCCTATCCCCATaGTGGGAGCTCTTCAGGACGCCTGCCAGCCCAAGGATGGTATCC | + |
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Preference number: 1 (lower is better) Translates to: HSGKGENSHFSFLSP*WELFRTPASPRMVS Trigger: GGATACCATCCTTGGGCTGGCAGGCGTCCTGAAGAGCTCCCACCATGGGGATAGGAATGAGAAATGAGAGTTTTCTCCCTTGCCGCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR CCA 90 bp | ATAGAGGTTCCAGGAGATGTAGAGGCCACTAAGAGGGACTTATGCTaGGGACTGTCGTTGCCACGGCAACCTCCCATTGCCTGTCAGAAT | + |
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Preference number: 1 (lower is better) Translates to: IEVPGDVEATKRDLC*GLSLPRQPPIACQN Trigger: ATTCTGACAGGCAATGGGAGGTTGCCGTGGCAACGACAGTCCCCAGCATAAGTCCCTCTTAGTGGCCTCTACATCTCCTGGAACCTCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR CCA 90 bp | ACAGGTCCTCTTGGGCATGTGACTTTGGTCCAGACCTTCTCTCCCTaGCTTCAACACATCCCTCACAAACCAAGGGCTGAGCTGGATCAT | + |
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Preference number: 1 (lower is better) Translates to: TGPLGHVTLVQTFSP*LQHIPHKPRAELDH Trigger: ATGATCCAGCTCAGCCCTTGGTTTGTGAGGGATGTGTTGAAGCCAGGGAGAGAAGGTCTGGACCAAAGTCACATGCCCAAGAGGACCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR CCA 90 bp | AGCGGCAAGGGAGAAAACTCTCATTTCTCATTCCTATCCCCATGGTaGGAGCTCTTCAGGACGCCTGCCAGCCCAAGGATGGTATCCAAA | + |
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Preference number: 1 (lower is better) Translates to: SGKGENSHFSFLSPW*ELFRTPASPRMVSK Trigger: TTTGGATACCATCCTTGGGCTGGCAGGCGTCCTGAAGAGCTCCCACCATGGGGATAGGAATGAGAAATGAGAGTTTTCTCCCTTGCCGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR CCA 90 bp | CTTAACATAGGAACCCACAGAGACTTTTCTGCCCAATTCACTCCCTaGCTCTCTCTATCCAGGACCTTGGGACTCTCCAGCGTTCCACTA | + |
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Preference number: 1 (lower is better) Translates to: LNIGTHRDFSAQFTP*LSLSRTLGLSSVPL Trigger: TAGTGGAACGCTGGAGAGTCCCAAGGTCCTGGATAGAGAGAGCCAGGGAGTGAATTGGGCAGAAAAGTCTCTGTGGGTTCCTATGTTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR CCA 90 bp | TGTCCGACGTGTGGACCACCTCAGAGTCTCGGTAGCCATTGTTATTaGAAGCCACAGCGGCAAGGGAGAAAACTCTCATTTCTCATTCCT | + |
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Preference number: 1 (lower is better) Translates to: CPTCGPPQSLGSHCY*KPQRQGRKLSFLIP Trigger: AGGAATGAGAAATGAGAGTTTTCTCCCTTGCCGCTGTGGCTTCCAATAACAATGGCTACCGAGACTCTGAGGTGGTCCACACGTCGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR CCA 90 bp | TCTCTCCCTGGCTTCAACACATCCCTCACAAACCAAGGGCTGAGCTaGATCATTTCAGCTTTGAATGAGTTACCTAGTGTATGTATGTCC | + |
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Preference number: 1 (lower is better) Translates to: SLPGFNTSLTNQGLS*IISALNELPSVCMS Trigger: GGACATACATACACTAGGTAACTCATTCAAAGCTGAAATGATCCAGCTCAGCCCTTGGTTTGTGAGGGATGTGTTGAAGCCAGGGAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR-3UTR CCA 90 bp | CCTCCTCCTGGCCCAGCGGCAGCTCTGACCCATAAGCCTTCCCTCCTGCATGTTGGCTGGCTGGAGGCTTaGGAACAGGTCCTCTTGGGC | + |
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Preference number: 2 (lower is better) Translates to: PPPGPAAALTHKPSLLHVGWLEA*EQVLLG Trigger: GCCCAAGAGGACCTGTTCCCAAGCCTCCAGCCAGCC...AACATGCAGGAGGGAAGGCTTATGGGTCAGAGCTGCCGCTGGGCCAGGAGGAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR-3UTR GCA 90 bp | GAAACGTGCCCTGCTCTCCTGGGGAATGCAGTGCGTGGGCCACACCTGAACAGCCCTGTCAGAATCCCCTaGAGGCCACGGAAGGGACTG | + |
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Preference number: 2 (lower is better) Translates to: ETCPALLGNAVRGPHLNSPVRIP*RPRKGL Trigger: CAGTCCCTTCCGTGGCCTGCAGGGGATTCTGACAGG...GCTGTTCAGGTGTGGCCCACGCACTGCATTCCCCAGGAGAGCAGGGCACGTTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR-3UTR GCA 90 bp | AGGACAGAGGCTGCCCCCTGTCAGGTGCCCTGCAGCATCAGGATGTCCGACGTGGCTCTTCAGGACGCCTaGCAGCCCAAGGATGGTATC | + |
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Preference number: 2 (lower is better) Translates to: RTEAAPCQVPCSIRMSDVALQDA*QPKDGI Trigger: GATACCATCCTTGGGCTGGCAGGCGTCCTGAAGAGC...CACGTCGGACATCCTGATGCTGCAGGGCACCTGACAGGGGGCAGCCTCTGTCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR-3UTR TCA 90 bp | AACGGTGAAGGGTGGGCTCTACCCACTCCCACCCAAGCATCTAACTCCAGCCATGCCCAGCGGCAGCTCTaGCCCATAAGCCTTCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: NGEGWALPTPTQASNSSHAQRQL*PISLPS Trigger: GGAGGGAAGGCTTATGGGTCAGAGCTGCCGCTGGGC...ATGGCTGGAGTTAGATGCTTGGGTGGGAGTGGGTAGAGCCCACCCTTCACCGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR-3UTR CCA 90 bp | GAAACGTGCCCTGCTCTCCTGGGGAATGCAGTGCGTGGGCCACACCTGAACAGCAGAAAGGGAGTTGGCTaGCTGGAGGCTTGGGAACAG | + |
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Preference number: 2 (lower is better) Translates to: ETCPALLGNAVRGPHLNSRKGVG*LEAWEQ Trigger: CTGTTCCCAAGCCTCCAGCCAGCCAACTCCCTTTCT...GCTGTTCAGGTGTGGCCCACGCACTGCATTCCCCAGGAGAGCAGGGCACGTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR-3UTR CCA 90 bp | GAAACGTGCCCTGCTCTCCTGGGGAATGCAGTGCGTGGGCCACACCTGAACAGCGCCCAATTCACTCCCTaGCTCTCTCTATCCAGGACC | + |
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Preference number: 2 (lower is better) Translates to: ETCPALLGNAVRGPHLNSAQFTP*LSLSRT Trigger: GGTCCTGGATAGAGAGAGCCAGGGAGTGAATTGGGC...GCTGTTCAGGTGTGGCCCACGCACTGCATTCCCCAGGAGAGCAGGGCACGTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR CAA 90 bp | GGAGATGTAGAGGCCACTAAGAGGGACTTATGCTGGGGACTGTCGTaGCCACGGCAACCTCCCATTGCCTGTCAGAATCCCCTGCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: GDVEATKRDLCWGLS*PRQPPIACQNPLQA Trigger: GGCCTGCAGGGGATTCTGACAGGCAATGGGAGGTTGCCGTGGCAACGACAGTCCCCAGCATAAGTCCCTCTTAGTGGCCTCTACATCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR-3UTR CCA 90 bp | ATGCTGCATGAAACGTGCCCTGCTCTCCTGGGGAATGCAGTGCGTGGGCCACACCAGACCTTCTCTCCCTaGCTTCAACACATCCCTCAC | + |
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Preference number: 2 (lower is better) Translates to: MLHETCPALLGNAVRGPHQTFSP*LQHIPH Trigger: GTGAGGGATGTGTTGAAGCCAGGGAGAGAAGGTCTG...GTGTGGCCCACGCACTGCATTCCCCAGGAGAGCAGGGCACGTTTCATGCAGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR-3UTR CCA 90 bp | ATGGTGGGAGCTCTTCAGGACGCCTGCCAGCCCAAGGATGGTATCCAAACGGTGCTCTATCCAGGACCTTaGGACTCTCCAGCGTTCCAC | + |
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Preference number: 2 (lower is better) Translates to: MVGALQDACQPKDGIQTVLYPGP*DSPAFH Trigger: GTGGAACGCTGGAGAGTCCCAAGGTCCTGGATAGAG...CACCGTTTGGATACCATCCTTGGGCTGGCAGGCGTCCTGAAGAGCTCCCACCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR-3UTR TCA 90 bp | AACGGTGAAGGGTGGGCTCTACCCACTCCCACCCAAGCATCTAACTCCAGCCATAGCGTTCCACTACCCTaGCCCCGGGGGTTTAAAGTT | + |
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Preference number: 2 (lower is better) Translates to: NGEGWALPTPTQASNSSHSVPLP*PRGFKV Trigger: AACTTTAAACCCCCGGGGTCAGGGTAGTGGAACGCT...ATGGCTGGAGTTAGATGCTTGGGTGGGAGTGGGTAGAGCCCACCCTTCACCGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR-3UTR CCA 90 bp | AACGGTGAAGGGTGGGCTCTACCCACTCCCACCCAAGCATCTAACTCCAGCCATGGGAACAGGTCCTCTTaGGCATGTGACTTTGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: NGEGWALPTPTQASNSSHGNRSS*ACDFGP Trigger: TGGACCAAAGTCACATGCCCAAGAGGACCTGTTCCC...ATGGCTGGAGTTAGATGCTTGGGTGGGAGTGGGTAGAGCCCACCCTTCACCGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR-3UTR CCA 90 bp | GACGATGCCATTTGGGATTTATTGACAACCTACCAGAAGAACACAAATGGGCTGCGTGCCCTGCTCTCCTaGGGAATGCAGTGCGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: DDAIWDLLTTYQKNTNGLRALLS*GMQCVG Trigger: GCCCACGCACTGCATTCCCCAGGAGAGCAGGGCACG...CAGCCCATTTGTGTTCTTCTGGTAGGTTGTCAATAAATCCCAAATGGCATCGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR-3UTR TCA 90 bp | CCTCCTGGCCCAGCGGCAGCTCTGACCCATAAGCCTTCCCTCCTGCATGTTCTGGGATCATTTCAGCTTTaGATGAGTTACCTAGTGTAT | + |
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Preference number: 2 (lower is better) Translates to: PPGPAAALTHKPSLLHVLGSFQL*MSYLVY Trigger: ATACACTAGGTAACTCATTCAAAGCTGAAATGATCC...CAGAACATGCAGGAGGGAAGGCTTATGGGTCAGAGCTGCCGCTGGGCCAGGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR-3UTR CCA 90 bp | CTAACTCCAGCCATTAGTACCTCTCTCCTGTCCTCCACAGTCCTCCCACCTCTATTCCCTCTTATAACCTaGGAGCATCAGCATCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: LTPAISTSLLSSTVLPPLFPLIT*EHQHLQ Trigger: CTGGAGATGCTGATGCTCCCAGGTTATAAGAGGGAA...TAGAGGTGGGAGGACTGTGGAGGACAGGAGAGAGGTACTAATGGCTGGAGTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR-3UTR CCA 90 bp | ATTTCTCATTCCTATCCCCATGGTGGGAGCTCTTCAGGACGCCTGCCAGCCCAAAACCAAGGGCTGAGCTaGATCATTTCAGCTTTGAAT | + |
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Preference number: 2 (lower is better) Translates to: ISHSYPHGGSSSGRLPAQNQGLS*IISALN Trigger: ATTCAAAGCTGAAATGATCCAGCTCAGCCCTTGGTT...TTGGGCTGGCAGGCGTCCTGAAGAGCTCCCACCATGGGGATAGGAATGAGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR-3UTR GCA 90 bp | GACGATGCCATTTGGGATTTATTGACAACCTACCAGAAGAACACAAATGGGCTGATGCTGCATGAAACGTaGCCTGCTCTCCTGGGGAAT | + |
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Preference number: 2 (lower is better) Translates to: DDAIWDLLTTYQKNTNGLMLHET*PALLGN Trigger: ATTCCCCAGGAGAGCAGGGCACGTTTCATGCAGCAT...CAGCCCATTTGTGTTCTTCTGGTAGGTTGTCAATAAATCCCAAATGGCATCGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR GCA 72 bp | GGACCCAGGACAGAGGCTGCCCCCTGTCAGGTGCCCTaGAGCATCAGGATGTCCGACGTGTGGACCACCTCA | + |
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Preference number: 3 (lower is better) Translates to: GPRTEAAPCQVP*SIRMSDVWTTS Trigger: TGAGGTGGTCCACACGTCGGACATCCTGATGCTGCAGGGCACCTGACAGGGGGCAGCCTCTGTCCTGGGTCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR-3UTR CAA 90 bp | GGACAGAGGCTGCCCCCTGTCAGGTGCCCTGCAGCATCAGGATGTCCGACGTGTTGGCTGGCTGGAGGCTaGGGAACAGGTCCTCTTGGG | + |
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Preference number: 3 (lower is better) Translates to: GQRLPPVRCPAASGCPTCWLAGG*GTGPLG Trigger: CCCAAGAGGACCTGTTCCCAAGCCTCCAGCCAGCCA...ACACGTCGGACATCCTGATGCTGCAGGGCACCTGACAGGGGGCAGCCTCTGTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR GCA 72 bp | CCTGAACAGCATCTCGCAGGGACCCAGGACAGAGGCTaGCCCCTGTCAGGTGCCCTGCAGCATCAGGATGTC | + |
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Preference number: 3 (lower is better) Translates to: PEQHLAGTQDRG*PLSGALQHQDV Trigger: GACATCCTGATGCTGCAGGGCACCTGACAGGGGGCAGCCTCTGTCCTGGGTCCCTGCGAGATGCTGTTCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR CCA 72 bp | AGCATCAGCATCTCCAGCCACTCCTGGTCTCTGCTCTaGCAGATTGGGCCTCCTCCTGGCCCAGCGGCAGCT | + |
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Preference number: 3 (lower is better) Translates to: SISISSHSWSLL*QIGPPPGPAAA Trigger: AGCTGCCGCTGGGCCAGGAGGAGGCCCAATCTGCCAGAGCAGAGACCAGGAGTGGCTGGAGATGCTGATGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR TCA 72 bp | CCTGTCAGAATCCCCTGCAGGCCACGGAAGGGACTGTaGGGCCCCGACCAGCCCTCCTATTTGGTGGTCTCT | + |
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Preference number: 3 (lower is better) Translates to: PVRIPCRPRKGL*GPDQPSYLVVS Trigger: AGAGACCACCAAATAGGAGGGCTGGTCGGGGCCTCACAGTCCCTTCCGTGGCCTGCAGGGGATTCTGACAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR GCA 72 bp | ATGCTGGGGACTGTCGTTGCCACGGCAACCTCCCATTaGCTGTCAGAATCCCCTGCAGGCCACGGAAGGGAC | + |
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Preference number: 3 (lower is better) Translates to: MLGTVVATATSH*LSESPAGHGRD Trigger: GTCCCTTCCGTGGCCTGCAGGGGATTCTGACAGGCAATGGGAGGTTGCCGTGGCAACGACAGTCCCCAGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR TCA 72 bp | GGCAGATTGGGCCTCCTCCTGGCCCAGCGGCAGCTCTaGCCCATAAGCCTTCCCTCCTGCATGTTCTGCAAT | + |
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Preference number: 3 (lower is better) Translates to: GRLGLLLAQRQL*PISLPSCMFCN Trigger: ATTGCAGAACATGCAGGAGGGAAGGCTTATGGGTCAGAGCTGCCGCTGGGCCAGGAGGAGGCCCAATCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR TCA 72 bp | AGGACGCCTGCCAGCCCAAGGATGGTATCCAAACGGTaGAGGGTGGGCTCTACCCACTCCCACCCAAGCATC | + |
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Preference number: 3 (lower is better) Translates to: RTPASPRMVSKR*RVGSTHSHPSI Trigger: GATGCTTGGGTGGGAGTGGGTAGAGCCCACCCTTCACCGTTTGGATACCATCCTTGGGCTGGCAGGCGTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR CCA 72 bp | CCCAATTCACTCCCTGGCTCTCTCTATCCAGGACCTTaGGACTCTCCAGCGTTCCACTACCCTGACCCCGGG | + |
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Preference number: 3 (lower is better) Translates to: PNSLPGSLYPGP*DSPAFHYPDPG Trigger: CCCGGGGTCAGGGTAGTGGAACGCTGGAGAGTCCCAAGGTCCTGGATAGAGAGAGCCAGGGAGTGAATTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR-3UTR CAA 90 bp | CTTGGGAACAGGTCCTCTTGGGCATGTGACTTTGGTCCAGACCTTCTCTCCCTGCACGGCAACCTCCCATaGCCTGTCAGAATCCCCTGC | + |
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Preference number: 3 (lower is better) Translates to: LGNRSSWACDFGPDLLSLHGNLP*PVRIPC Trigger: GCAGGGGATTCTGACAGGCAATGGGAGGTTGCCGTG...CAGGGAGAGAAGGTCTGGACCAAAGTCACATGCCCAAGAGGACCTGTTCCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR GCA 72 bp | AGGCCACTAAGAGGGACTTATGCTGGGGACTGTCGTTaGCACGGCAACCTCCCATTGCCTGTCAGAATCCCC | + |
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Preference number: 3 (lower is better) Translates to: RPLRGTYAGDCR*HGNLPLPVRIP Trigger: GGGGATTCTGACAGGCAATGGGAGGTTGCCGTGGCAACGACAGTCCCCAGCATAAGTCCCTCTTAGTGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR CCA 72 bp | CCAGGAGATGTAGAGGCCACTAAGAGGGACTTATGCTaGGGACTGTCGTTGCCACGGCAACCTCCCATTGCC | + |
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Preference number: 3 (lower is better) Translates to: PGDVEATKRDLC*GLSLPRQPPIA Trigger: GGCAATGGGAGGTTGCCGTGGCAACGACAGTCCCCAGCATAAGTCCCTCTTAGTGGCCTCTACATCTCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR CCA 72 bp | GAGTTGGCTGGCTGGAGGCTTGGGAACAGGTCCTCTTaGGCATGTGACTTTGGTCCAGACCTTCTCTCCCTG | + |
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Preference number: 3 (lower is better) Translates to: ELAGWRLGNRSS*ACDFGPDLLSL Trigger: CAGGGAGAGAAGGTCTGGACCAAAGTCACATGCCCAAGAGGACCTGTTCCCAAGCCTCCAGCCAGCCAACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR CCA 72 bp | CTGCCAGCCCAAGGATGGTATCCAAACGGTGAAGGGTaGGCTCTACCCACTCCCACCCAAGCATCTAACTCC | + |
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Preference number: 3 (lower is better) Translates to: LPAQGWYPNGEG*ALPTPTQASNS Trigger: GGAGTTAGATGCTTGGGTGGGAGTGGGTAGAGCCCACCCTTCACCGTTTGGATACCATCCTTGGGCTGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR GCA 72 bp | ATTCCTATCCCCATGGTGGGAGCTCTTCAGGACGCCTaGCAGCCCAAGGATGGTATCCAAACGGTGAAGGGT | + |
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Preference number: 3 (lower is better) Translates to: IPIPMVGALQDA*QPKDGIQTVKG Trigger: ACCCTTCACCGTTTGGATACCATCCTTGGGCTGGCAGGCGTCCTGAAGAGCTCCCACCATGGGGATAGGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR-3UTR CAA 90 bp | CCTCCTGGCCCAGCGGCAGCTCTGACCCATAAGCCTTCCCTCCTGCATGTTCTGCCCGGGGGTTTAAAGTaGGCTTGTATGGAAATGTAT | + |
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Preference number: 3 (lower is better) Translates to: PPGPAAALTHKPSLLHVLPGGLK*ACMEMY Trigger: ATACATTTCCATACAAGCCAACTTTAAACCCCCGGG...CAGAACATGCAGGAGGGAAGGCTTATGGGTCAGAGCTGCCGCTGGGCCAGGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR GCA 72 bp | GTTCCAGGAGATGTAGAGGCCACTAAGAGGGACTTATaGTGGGGACTGTCGTTGCCACGGCAACCTCCCATT | + |
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Preference number: 3 (lower is better) Translates to: VPGDVEATKRDL*WGLSLPRQPPI Trigger: AATGGGAGGTTGCCGTGGCAACGACAGTCCCCAGCATAAGTCCCTCTTAGTGGCCTCTACATCTCCTGGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR CCA 72 bp | GGAACCCACAGAGACTTTTCTGCCCAATTCACTCCCTaGCTCTCTCTATCCAGGACCTTGGGACTCTCCAGC | + |
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Preference number: 3 (lower is better) Translates to: GTHRDFSAQFTP*LSLSRTLGLSS Trigger: GCTGGAGAGTCCCAAGGTCCTGGATAGAGAGAGCCAGGGAGTGAATTGGGCAGAAAAGTCTCTGTGGGTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| 3UTR CCA 72 bp | CTTGGGCATGTGACTTTGGTCCAGACCTTCTCTCCCTaGCTTCAACACATCCCTCACAAACCAAGGGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LGHVTLVQTFSP*LQHIPHKPRAE Trigger: CTCAGCCCTTGGTTTGTGAGGGATGTGTTGAAGCCAGGGAGAGAAGGTCTGGACCAAAGTCACATGCCCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGAGTCTCGGTAGCCATTGTTATTGGAAGCCACAGCGGCAAGGGAGAAAACCTTGGGCATGTGACTTaGGTCCAGACCTTCTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LRVSVAIVIGSHSGKGENLGHVT*VQTFSP Trigger: GGGAGAGAAGGTCTGGACCAAAGTCACATGCCCAAG...GTTTTCTCCCTTGCCGCTGTGGCTTCCAATAACAATGGCTACCGAGACTCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| 3UTR-3UTR CAA 90 bp | CCTAATCCACCCCCAAACAGACCTAAAATGCTATACAGTGCCATGCAAGTCCCCCAAAGAGAAAGGGAGTaGGCTGGCTGGAGGCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: PNPPPNRPKMLYSAMQVPQRERE*AGWRLG Trigger: CCCAAGCCTCCAGCCAGCCAACTCCCTTTCTCTTTG...GGGGACTTGCATGGCACTGTATAGCATTTTAGGTCTGTTTGGGGGTGGATTAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| 3UTR CCA 72 bp | TGTGGACCACCTCAGAGTCTCGGTAGCCATTGTTATTaGAAGCCACAGCGGCAAGGGAGAAAACTCTCATTT | + |
|
Preference number: 3 (lower is better) Translates to: CGPPQSLGSHCY*KPQRQGRKLSF Trigger: AAATGAGAGTTTTCTCCCTTGCCGCTGTGGCTTCCAATAACAATGGCTACCGAGACTCTGAGGTGGTCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| 3UTR CCA 72 bp | GGCTTCAACACATCCCTCACAAACCAAGGGCTGAGCTaGATCATTTCAGCTTTGAATGAGTTACCTAGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: GFNTSLTNQGLS*IISALNELPSV Trigger: TACACTAGGTAACTCATTCAAAGCTGAAATGATCCAGCTCAGCCCTTGGTTTGTGAGGGATGTGTTGAAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| 3UTR-3UTR CAA 90 bp | CCTAATCCACCCCCAAACAGACCTAAAATGCTATACAGTGCCATGCAAGTCCCCTGGATCATTTCAGCTTaGAATGAGTTACCTAGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: PNPPPNRPKMLYSAMQVPWIISA*NELPSV Trigger: TACACTAGGTAACTCATTCAAAGCTGAAATGATCCA...GGGGACTTGCATGGCACTGTATAGCATTTTAGGTCTGTTTGGGGGTGGATTAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR CCA 90 bp | CTGTCAGAATCCCCTGCAGGCCACGGAAGGGACTGTGAGGCCCCGACCAGCCCTCCAGGGGTCCCAGGCTaGAGAACTGGCCCAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSESPAGHGRDCEAPTSPPGVPG*RTGPGR Trigger: TCTCCCTGGGCCAGTTCTCCAGCCTGGGACCCCTGG...AGGGCTGGTCGGGGCCTCACAGTCCCTTCCGTGGCCTGCAGGGGATTCTGACAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR CCA 90 bp | CTGTCAGAATCCCCTGCAGGCCACGGAAGGGACTGTGAGGCCCCGACCAGCCCTGGCTCCCAGCCAGTGTaGCCACATACATTCCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSESPAGHGRDCEAPTSPGSQPV*PHTFPS Trigger: GGACGGGAATGTATGTGGCCACACTGGCTGGGAGCC...AGGGCTGGTCGGGGCCTCACAGTCCCTTCCGTGGCCTGCAGGGGATTCTGACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR GCA 90 bp | CTGTCAGAATCCCCTGCAGGCCACGGAAGGGACTGTGAGGCCCCGACCAGCCCTCCACGCAGTAGCCGATaGAGGACAGCAGGAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSESPAGHGRDCEAPTSPPRSSR*RTAGSP Trigger: TGGACTTCCTGCTGTCCTGCATCGGCTACTGCGTGG...AGGGCTGGTCGGGGCCTCACAGTCCCTTCCGTGGCCTGCAGGGGATTCTGACAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR CCA 90 bp | CCTCCTCCTGGCCCAGCGGCAGCTCTGACCCATAAGCCTTCCCTCCTGCATGTTCCTGCTTTGGCCACTTaGTCCACGGGCACACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PPPGPAAALTHKPSLLHVPALAT*STGTPS Trigger: GCTGGGTGTGCCCGTGGACCAAGTGGCCAAAGCAGG...AACATGCAGGAGGGAAGGCTTATGGGTCAGAGCTGCCGCTGGGCCAGGAGGAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR GCA 90 bp | GAAACGTGCCCTGCTCTCCTGGGGAATGCAGTGCGTGGGCCACACCTGAACAGCCCGTGTTCCACCAGTTaGCACAGTGCTCCCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ETCPALLGNAVRGPHLNSPCSTS*HSAPRA Trigger: TGCCCTGGGAGCACTGTGGCAACTGGTGGAACACGG...GCTGTTCAGGTGTGGCCCACGCACTGCATTCCCCAGGAGAGCAGGGCACGTTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR CCA 90 bp | GAAACGTGCCCTGCTCTCCTGGGGAATGCAGTGCGTGGGCCACACCTGAACAGCAGTGGCTTTGGTGACTaGCTCCCAGCCAGTGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ETCPALLGNAVRGPHLNSSGFGD*LPASVA Trigger: GGCCACACTGGCTGGGAGCCAGTCACCAAAGCCACT...GCTGTTCAGGTGTGGCCCACGCACTGCATTCCCCAGGAGAGCAGGGCACGTTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR TCA 90 bp | CTGGCTGGAGGCTTGGGAACAGGTCCTCTTGGGCATGTGACTTTGGTCCAGACCTCAGCAGGTCTGGGGTaGTGGGCTTGCGGAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LAGGLGTGPLGHVTLVQTSAGLG*WACGGE Trigger: CTCACCTCCGCAAGCCCATCACCCCAGACCTGCTGA...GGTCTGGACCAAAGTCACATGCCCAAGAGGACCTGTTCCCAAGCCTCCAGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR TCA 90 bp | GGACAGAGGCTGCCCCCTGTCAGGTGCCCTGCAGCATCAGGATGTCCGACGTGTCTGAGGGCTGGTACTTaGCGATGCTGTACACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GQRLPPVRCPAASGCPTCLRAGT*RCCTPA Trigger: TGCTGGTGTACAGCATCGTCAAGTACCAGCCCTCAG...ACACGTCGGACATCCTGATGCTGCAGGGCACCTGACAGGGGGCAGCCTCTGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR GCA 90 bp | AAGAGAAAGGGAGTTGGCTGGCTGGAGGCTTGGGAACAGGTCCTCTTGGGCATGGGCCAGGCCAGGGCCTaGTTTGGCCACTTGGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KRKGVGWLEAWEQVLLGMGQARA*FGHLVH Trigger: GTGGACCAAGTGGCCAAAGCAGGCCCTGGCCTGGCC...CATGCCCAAGAGGACCTGTTCCCAAGCCTCCAGCCAGCCAACTCCCTTTCTCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR GCA 90 bp | GGACAGAGGCTGCCCCCTGTCAGGTGCCCTGCAGCATCAGGATGTCCGACGTGTCGGGGAAGCGATAGCTaGCATATTCTGAGGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GQRLPPVRCPAASGCPTCRGSDS*HILRAG Trigger: ACCAGCCCTCAGAATATGGCAGCTATCGCTTCCCCG...ACACGTCGGACATCCTGATGCTGCAGGGCACCTGACAGGGGGCAGCCTCTGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR TCA 90 bp | CCTCCTCCTGGCCCAGCGGCAGCTCTGACCCATAAGCCTTCCCTCCTGCATGTTAGGGCAAATTGCTGGTaGGGGAGGCGAAGAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: PPPGPAAALTHKPSLLHVRANCW*GRRRGR Trigger: TCTACCTCTTCGCCTCCCTCACCAGCAATTTGCCCT...AACATGCAGGAGGGAAGGCTTATGGGTCAGAGCTGCCGCTGGGCCAGGAGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR TCA 90 bp | GGACAGAGGCTGCCCCCTGTCAGGTGCCCTGCAGCATCAGGATGTCCGACGTGTCACACAGATGAGTCCTaGGAACACTGCCTTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GQRLPPVRCPAASGCPTCHTDES*EHCLLG Trigger: CCCAAGAAGGCAGTGTTCTCAGGACTCATCTGTGTG...ACACGTCGGACATCCTGATGCTGCAGGGCACCTGACAGGGGGCAGCCTCTGTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR TCA 90 bp | GAAACGTGCCCTGCTCTCCTGGGGAATGCAGTGCGTGGGCCACACCTGAACAGCTGTTCTCGAAGCTGGTaGTGCCCCCGTATTTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: ETCPALLGNAVRGPHLNSCSRSW*CPRICA Trigger: TGCGCAAATACGGGGGCATCACCAGCTTCGAGAACA...GCTGTTCAGGTGTGGCCCACGCACTGCATTCCCCAGGAGAGCAGGGCACGTTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR CCA 90 bp | ATGCTGCATGAAACGTGCCCTGCTCTCCTGGGGAATGCAGTGCGTGGGCCACACAGGTCCACATCGCCCTaGTCACTGGGAGTCATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: MLHETCPALLGNAVRGPHRSTSP*SLGVIS Trigger: GCTGATGACTCCCAGTGACCAGGGCGATGTGGACCT...GTGTGGCCCACGCACTGCATTCCCCAGGAGAGCAGGGCACGTTTCATGCAGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR CCA 90 bp | TGGTATCCAAACGGTGAAGGGTGGGCTCTACCCACTCCCACCCAAGCATCTAACGGTCGGCCGATGCCCTaGCTGCCCTGTATGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WYPNGEGWALPTPTQASNGRPMP*LPCMCR Trigger: CCTGCACATACAGGGCAGCCAGGGCATCGGCCGACC...GTTAGATGCTTGGGTGGGAGTGGGTAGAGCCCACCCTTCACCGTTTGGATACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR CCA 90 bp | TGGGCCACACCTGAACAGCATCTCGCAGGGACCCAGGACAGAGGCTGCCCCCTGTACCAGCATACCAGCTaGGATCATGAGGCAAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WATPEQHLAGTQDRGCPLYQHTS*DHEARE Trigger: CTCTCTTGCCTCATGATCCCAGCTGGTATGCTGGTA...CAGGGGGCAGCCTCTGTCCTGGGTCCCTGCGAGATGCTGTTCAGGTGTGGCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR CCA 90 bp | GACGCCTGCCAGCCCAAGGATGGTATCCAAACGGTGAAGGGTGGGCTCTACCCACACGGTCCACCTCAATaGCCGTGTTCTCGAAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DACQPKDGIQTVKGGLYPHGPPQ*PCSRSW Trigger: CCAGCTTCGAGAACACGGCCATTGAGGTGGACCGTG...TGGGTAGAGCCCACCCTTCACCGTTTGGATACCATCCTTGGGCTGGCAGGCGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR GCA 90 bp | AAGAGAAAGGGAGTTGGCTGGCTGGAGGCTTGGGAACAGGTCCTCTTGGGCATGCTCTTGGGGCCTCTGTaGTCCAGGCAAAGCTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: KRKGVGWLEAWEQVLLGMLLGPL*SRQSSV Trigger: CACGGAGCTTTGCCTGGAGCACAGAGGCCCCAAGAG...CATGCCCAAGAGGACCTGTTCCCAAGCCTCCAGCCAGCCAACTCCCTTTCTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR CCA 90 bp | GAAACGTGCCCTGCTCTCCTGGGGAATGCAGTGCGTGGGCCACACCTGAACAGCCATGGTCATGGCCTGTaGGTAGACAACAAAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ETCPALLGNAVRGPHLNSHGHGL*VDNKGQ Trigger: CTGGCCTTTGTTGTCTACCCACAGGCCATGACCATG...GCTGTTCAGGTGTGGCCCACGCACTGCATTCCCCAGGAGAGCAGGGCACGTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR GCA 90 bp | ATTTCTCATTCCTATCCCCATGGTGGGAGCTCTTCAGGACGCCTGCCAGCCCAAGGCCGATGCCCTGGCTaGCCTGTATGTGCAGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: ISHSYPHGGSSSGRLPAQGRCPG*PVCAGH Trigger: ATGTCCTGCACATACAGGGCAGCCAGGGCATCGGCC...TTGGGCTGGCAGGCGTCCTGAAGAGCTCCCACCATGGGGATAGGAATGAGAAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR CCA 90 bp | AACGGTGAAGGGTGGGCTCTACCCACTCCCACCCAAGCATCTAACTCCAGCCATCATCGCCCTGGTCACTaGGAGTCATCAGCAGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NGEGWALPTPTQASNSSHHRPGH*ESSAGL Trigger: CAGACCTGCTGATGACTCCCAGTGACCAGGGCGATG...ATGGCTGGAGTTAGATGCTTGGGTGGGAGTGGGTAGAGCCCACCCTTCACCGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS-3UTR CCA 90 bp | CTCAGAGTCTCGGTAGCCATTGTTATTGGAAGCCACAGCGGCAAGGGAGAAAACGGCCAGGGCCTGCTTTaGCCACTTGGTCCACGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRVSVAIVIGSHSGKGENGQGLL*PLGPRA Trigger: TGCCCGTGGACCAAGTGGCCAAAGCAGGCCCTGGCC...GTTTTCTCCCTTGCCGCTGTGGCTTCCAATAACAATGGCTACCGAGACTCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR TCA 90 bp | TGGTATCCAAACGGTGAAGGGTGGGCTCTACCCACTCCCACCCAAGCATCTAACCACAGATGGCCAGCATaGGGAAGTAGGGCACGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WYPNGEGWALPTPTQASNHRWPA*GSRARG Trigger: TCCTCGTGCCCTACTTCCTCATGCTGGCCATCTGTG...GTTAGATGCTTGGGTGGGAGTGGGTAGAGCCCACCCTTCACCGTTTGGATACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR TCA 90 bp | ACCTTCTCTCCCTGGCTTCAACACATCCCTCACAAACCAAGGGCTGAGCTGGATTACAGAGGAACACGATaGCCCAGGCCAGCAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TFSPWLQHIPHKPRAELDYRGTR*PRPAAG Trigger: GCCTGCTGCTGGCCTGGGTCATCGTGTTCCTCTGTA...ATCCAGCTCAGCCCTTGGTTTGTGAGGGATGTGTTGAAGCCAGGGAGAGAAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR TCA 90 bp | AAGAGAAAGGGAGTTGGCTGGCTGGAGGCTTGGGAACAGGTCCTCTTGGGCATGTACCAGCTGGGATCATaGGGCAAGAGAGCAGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: KRKGVGWLEAWEQVLLGMYQLGS*GKRADP Trigger: TGGGTCTGCTCTCTTGCCTCATGATCCCAGCTGGTA...CATGCCCAAGAGGACCTGTTCCCAAGCCTCCAGCCAGCCAACTCCCTTTCTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR CCA 90 bp | TGGTATCCAAACGGTGAAGGGTGGGCTCTACCCACTCCCACCCAAGCATCTAACAGTCATCAGCAGGTCTaGGGTGATGGGCTTGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: WYPNGEGWALPTPTQASNSHQQV*GDGLAE Trigger: CTCCGCAAGCCCATCACCCCAGACCTGCTGATGACT...GTTAGATGCTTGGGTGGGAGTGGGTAGAGCCCACCCTTCACCGTTTGGATACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR CCA 90 bp | ACCTTCTCTCCCTGGCTTCAACACATCCCTCACAAACCAAGGGCTGAGCTGGATCCCAGGCTGGAGAACTaGCCCAGGGAGAGCTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TFSPWLQHIPHKPRAELDPRLEN*PRESSR Trigger: TCTTGAGCTCTCCCTGGGCCAGTTCTCCAGCCTGGG...ATCCAGCTCAGCCCTTGGTTTGTGAGGGATGTGTTGAAGCCAGGGAGAGAAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR CCA 90 bp | CTGGCTGGAGGCTTGGGAACAGGTCCTCTTGGGCATGTGACTTTGGTCCAGACCGAGGCAACATGGTCATaGCCTGTGGGTAGACAACAA | + |
|
Preference number: 4 (lower is better) Translates to: LAGGLGTGPLGHVTLVQTEATWS*PVGRQQ Trigger: TTGTTGTCTACCCACAGGCCATGACCATGTTGCCTC...GGTCTGGACCAAAGTCACATGCCCAAGAGGACCTGTTCCCAAGCCTCCAGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR CCA 90 bp | ATGCTGCATGAAACGTGCCCTGCTCTCCTGGGGAATGCAGTGCGTGGGCCACACCCATATTCTGAGGGCTaGTACTTGACGATGCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: MLHETCPALLGNAVRGPHPYSEG*YLTMLY Trigger: GTACAGCATCGTCAAGTACCAGCCCTCAGAATATGG...GTGTGGCCCACGCACTGCATTCCCCAGGAGAGCAGGGCACGTTTCATGCAGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR TCA 90 bp | CTCAGAGTCTCGGTAGCCATTGTTATTGGAAGCCACAGCGGCAAGGGAGAAAACAGGGAAAGGTGGCCGTaGAATACACCACCTTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LRVSVAIVIGSHSGKGENRERWP*NTPPCP Trigger: CGGGCAAGGTGGTGTATTTCACGGCCACCTTTCCCT...GTTTTCTCCCTTGCCGCTGTGGCTTCCAATAACAATGGCTACCGAGACTCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR TCA 90 bp | ACCTTCTCTCCCTGGCTTCAACACATCCCTCACAAACCAAGGGCTGAGCTGGATTGTAGGAAGCAAAGGTaGGGAGACCCCCAAAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TFSPWLQHIPHKPRAELDCRKQR*GDPQSP Trigger: TGGGCTTTGGGGGTCTCCTCACCTTTGCTTCCTACA...ATCCAGCTCAGCCCTTGGTTTGTGAGGGATGTGTTGAAGCCAGGGAGAGAAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR TCA 90 bp | AAGAGAAAGGGAGTTGGCTGGCTGGAGGCTTGGGAACAGGTCCTCTTGGGCATGGAAGGACCAGAAAGGTaGCAGAGGCAACATGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KRKGVGWLEAWEQVLLGMEGPER*QRQHGH Trigger: ATGACCATGTTGCCTCTGTCACCTTTCTGGTCCTTC...CATGCCCAAGAGGACCTGTTCCCAAGCCTCCAGCCAGCCAACTCCCTTTCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR TCA 90 bp | CTTGGGAACAGGTCCTCTTGGGCATGTGACTTTGGTCCAGACCTTCTCTCCCTGACATGGCCACACAGATaGGTCCTGAGAACACTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LGNRSSWACDFGPDLLSLTWPHR*VLRTLP Trigger: AGGCAGTGTTCTCAGGACTCATCTGTGTGGCCATGT...CAGGGAGAGAAGGTCTGGACCAAAGTCACATGCCCAAGAGGACCTGTTCCCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR CCA 90 bp | AGGACAGAGGCTGCCCCCTGTCAGGTGCCCTGCAGCATCAGGATGTCCGACGTGTCACTGCAGTCACTATaGTTTCTAGAAAGGCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: RTEAAPCQVPCSIRMSDVSLQSL*FLERQT Trigger: AGTTTGCCTTTCTAGAAACCATAGTGACTGCAGTGA...CACGTCGGACATCCTGATGCTGCAGGGCACCTGACAGGGGGCAGCCTCTGTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR GCA 90 bp | ACCTCTTCTGGAAAAACTGGCCTTAACATAGGAACCCACAGAGACTTTTCTGCCGCAGACCCATCAGGATaGCTAGCAGCTCGGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSSGKTGLNIGTHRDFSAADPSG*LAARPR Trigger: CCTGGGCCGAGCTGCTAGGCATCCTGATGGGTCTGC...GGCAGAAAAGTCTCTGTGGGTTCCTATGTTAAGGCCAGTTTTTCCAGAAGAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR CCA 90 bp | CTCAGAGTCTCGGTAGCCATTGTTATTGGAAGCCACAGCGGCAAGGGAGAAAACGGGCCGCAGGTAGTATaGGAACTCATCAGTCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LRVSVAIVIGSHSGKGENGPQVV*ELISHC Trigger: GCAGTGACTGATGAGTTCCCATACTACCTGCGGCCC...GTTTTCTCCCTTGCCGCTGTGGCTTCCAATAACAATGGCTACCGAGACTCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR TCA 90 bp | CTCAGAGTCTCGGTAGCCATTGTTATTGGAAGCCACAGCGGCAAGGGAGAAAACTACCCCCATCAGTGGTaGGAATCAGTCCCATCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LRVSVAIVIGSHSGKGENYPHQW*ESVPSG Trigger: ACCTGATGGGACTGATTCTCACCACTGATGGGGGTA...GTTTTCTCCCTTGCCGCTGTGGCTTCCAATAACAATGGCTACCGAGACTCTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR TCA 90 bp | CTCAGAGTCTCGGTAGCCATTGTTATTGGAAGCCACAGCGGCAAGGGAGAAAACAGTAGAGGCCTGGCTTaGAGCCTAGCATCATGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LRVSVAIVIGSHSGKGENSRGLA*SLASCG Trigger: TCCACATGATGCTAGGCTTCAAGCCAGGCCTCTACT...GTTTTCTCCCTTGCCGCTGTGGCTTCCAATAACAATGGCTACCGAGACTCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR GCA 90 bp | CCTAATCCACCCCCAAACAGACCTAAAATGCTATACAGTGCCATGCAAGTCCCCGTTGCCCCTGTCTGCTaGGAAGTCTACATCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PNPPPNRPKMLYSAMQVPVAPVC*EVYIQV Trigger: GACCTGGATGTAGACTTCGCAGCAGACAGGGGCAAC...GGGGACTTGCATGGCACTGTATAGCATTTTAGGTCTGTTTGGGGGTGGATTAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR CCA 90 bp | TCAGCCCCCAAAGCTCCCACCTCTTCTGGAAAAACTGGCCTTAACATAGGAACCAAGCCTAGCATCATGTaGATATCTCGGCAGAACCGC | + |
|
Preference number: 4 (lower is better) Translates to: SAPKAPTSSGKTGLNIGTKPSIM*ISRQNR Trigger: GCGGTTCTGCCGAGATATCCACATGATGCTAGGCTT...GGTTCCTATGTTAAGGCCAGTTTTTCCAGAAGAGGTGGGAGCTTTGGGGGCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
||
| CDS-3UTR TCA 90 bp | GGGCTGAGCTGGATCATTTCAGCTTTGAATGAGTTACCTAGTGTATGTATGTCCCATCAGTGGCTTTGGTaGCTGGCTCCCAGCCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLSWIISALNELPSVCMSHQWLW*LAPSQC Trigger: ACACTGGCTGGGAGCCAGTCACCAAAGCCACTGATG...GGACATACATACACTAGGTAACTCATTCAAAGCTGAAATGATCCAGCTCAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS-3UTR TCA 90 bp | GGGCTGAGCTGGATCATTTCAGCTTTGAATGAGTTACCTAGTGTATGTATGTCCATGGGCTTGCGGAGGTaGGCTTCTTGGAGCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: GLSWIISALNELPSVCMSMGLRR*ASWSFF Trigger: GAAGAAGCTCCAAGAAGCTCACCTCCGCAAGCCCAT...GGACATACATACACTAGGTAACTCATTCAAAGCTGAAATGATCCAGCTCAGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS-3UTR GCA 90 bp | GACGATGCCATTTGGGATTTATTGACAACCTACCAGAAGAACACAAATGGGCTGCACCAGTTGCCACAGTaGTCCCAGGGCAAATTGCTG | + |
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Preference number: 4 (lower is better) Translates to: DDAIWDLLTTYQKNTNGLHQLPQ*SQGKLL Trigger: CAGCAATTTGCCCTGGGAGCACTGTGGCAACTGGTG...CAGCCCATTTGTGTTCTTCTGGTAGGTTGTCAATAAATCCCAAATGGCATCGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS GCA 90 bp | GGCAGAGGTTCCAGCGAATCTCCCCCGGTCGGCCGATGCCCTGGCTaGCCTGTATGTGCAGGACATAGCGGCTCCAGTACTCCTCACTGG | + |
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Preference number: 5 (lower is better) Translates to: GRGSSESPPVGRCPG*PVCAGHSGSSTPHW Trigger: CCAGTGAGGAGTACTGGAGCCGCTATGTCCTGCACATACAGGGCAGCCAGGGCATCGGCCGACCGGGGGAGATTCGCTGGAACCTCTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS-3UTR CAA 90 bp | CCTCCTGGCCCAGCGGCAGCTCTGACCCATAAGCCTTCCCTCCTGCATGTTCTGTCCGTGTTCCACCAGTaGCCACAGTGCTCCCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: PPGPAAALTHKPSLLHVLSVFHQ*PQCSQG Trigger: GCCCTGGGAGCACTGTGGCAACTGGTGGAACACGGA...CAGAACATGCAGGAGGGAAGGCTTATGGGTCAGAGCTGCCGCTGGGCCAGGAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS GCA 90 bp | GCAGGACAGCAGGAAGTCCAGCTTGCCCGTCCAGTTGCCCCTGTCTaGTGCGAAGTCTACATCCAGGTCCACATCGCCCTGGTCACTGGG | + |
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Preference number: 5 (lower is better) Translates to: AGQQEVQLARPVAPV*CEVYIQVHIALVTG Trigger: CCCAGTGACCAGGGCGATGTGGACCTGGATGTAGACTTCGCAGCAGACAGGGGCAACTGGACGGGCAAGCTGGACTTCCTGCTGTCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS GCA 90 bp | GGACAGCAGGAAGTCCAGCTTGCCCGTCCAGTTGCCCCTGTCTGCTaGGAAGTCTACATCCAGGTCCACATCGCCCTGGTCACTGGGAGT | + |
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Preference number: 5 (lower is better) Translates to: GQQEVQLARPVAPVC*EVYIQVHIALVTGS Trigger: ACTCCCAGTGACCAGGGCGATGTGGACCTGGATGTAGACTTCGCAGCAGACAGGGGCAACTGGACGGGCAAGCTGGACTTCCTGCTGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS CCA 90 bp | TTGCCCCTGTCTGCTGCGAAGTCTACATCCAGGTCCACATCGCCCTaGTCACTGGGAGTCATCAGCAGGTCTGGGGTGATGGGCTTGCGG | + |
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Preference number: 5 (lower is better) Translates to: LPLSAAKSTSRSTSP*SLGVISRSGVMGLR Trigger: CCGCAAGCCCATCACCCCAGACCTGCTGATGACTCCCAGTGACCAGGGCGATGTGGACCTGGATGTAGACTTCGCAGCAGACAGGGGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS-3UTR CAA 90 bp | TGGTATCCAAACGGTGAAGGGTGGGCTCTACCCACTCCCACCCAAGCATCTAACAGGCCAGGGCCTGCTTaGGCCACTTGGTCCACGGGC | + |
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Preference number: 5 (lower is better) Translates to: WYPNGEGWALPTPTQASNRPGPA*ATWSTG Trigger: GCCCGTGGACCAAGTGGCCAAAGCAGGCCCTGGCCT...GTTAGATGCTTGGGTGGGAGTGGGTAGAGCCCACCCTTCACCGTTTGGATACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS TCA 90 bp | AGCCCTCCTCTCGAAGCACAGCTACCAGCATACCAGCTGGGATCATaGGGCAAGAGAGCAGACCCATCAGGATGCCTAGCAGCTCGGCCC | + |
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Preference number: 5 (lower is better) Translates to: SPPLEAQLPAYQLGS*GKRADPSGCLAARP Trigger: GGGCCGAGCTGCTAGGCATCCTGATGGGTCTGCTCTCTTGCCTCATGATCCCAGCTGGTATGCTGGTAGCTGTGCTTCGAGAGGAGGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS GCA 90 bp | AGTAGCCGATGCAGGACAGCAGGAAGTCCAGCTTGCCCGTCCAGTTaGCCCTGTCTGCTGCGAAGTCTACATCCAGGTCCACATCGCCCT | + |
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Preference number: 5 (lower is better) Translates to: SSRCRTAGSPACPSS*PCLLRSLHPGPHRP Trigger: AGGGCGATGTGGACCTGGATGTAGACTTCGCAGCAGACAGGGGCAACTGGACGGGCAAGCTGGACTTCCTGCTGTCCTGCATCGGCTACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS-3UTR CAA 90 bp | ACCCAGGACAGAGGCTGCCCCCTGTCAGGTGCCCTGCAGCATCAGGATGTCCGAGTGATGCCCCCGTATTaGCGCATGTGTACCATCAGT | + |
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Preference number: 5 (lower is better) Translates to: TQDRGCPLSGALQHQDVRVMPPY*RMCTIS Trigger: ACTGATGGTACACATGCGCAAATACGGGGGCATCAC...TCGGACATCCTGATGCTGCAGGGCACCTGACAGGGGGCAGCCTCTGTCCTGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS-3UTR CAA 90 bp | ATTTCTCATTCCTATCCCCATGGTGGGAGCTCTTCAGGACGCCTGCCAGCCCAAAGCAGGAAGTCCAGCTaGCCCGTCCAGTTGCCCCTG | + |
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Preference number: 5 (lower is better) Translates to: ISHSYPHGGSSSGRLPAQSRKSS*PVQLPL Trigger: CAGGGGCAACTGGACGGGCAAGCTGGACTTCCTGCT...TTGGGCTGGCAGGCGTCCTGAAGAGCTCCCACCATGGGGATAGGAATGAGAAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS-3UTR CAA 90 bp | ACCTTCTCTCCCTGGCTTCAACACATCCCTCACAAACCAAGGGCTGAGCTGGATGCCTGCTTTGGCCACTaGGTCCACGGGCACACCCAG | + |
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Preference number: 5 (lower is better) Translates to: TFSPWLQHIPHKPRAELDACFGH*VHGHTQ Trigger: CTGGGTGTGCCCGTGGACCAAGTGGCCAAAGCAGGC...ATCCAGCTCAGCCCTTGGTTTGTGAGGGATGTGTTGAAGCCAGGGAGAGAAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS TCA 90 bp | CTGCGATCTCACGGTCCACCTCAATGGCCGTGTTCTCGAAGCTGGTaGTGCCCCCGTATTTGCGCATGTGTACCATCAGTGGCTTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: LRSHGPPQWPCSRSW*CPRICACVPSVALV Trigger: CACCAAAGCCACTGATGGTACACATGCGCAAATACGGGGGCATCACCAGCTTCGAGAACACGGCCATTGAGGTGGACCGTGAGATCGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS-3UTR CAA 90 bp | CCTAATCCACCCCCAAACAGACCTAAAATGCTATACAGTGCCATGCAAGTCCCCAGCTTGCCCGTCCAGTaGCCCCTGTCTGCTGCGAAG | + |
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Preference number: 5 (lower is better) Translates to: PNPPPNRPKMLYSAMQVPSLPVQ*PLSAAK Trigger: CTTCGCAGCAGACAGGGGCAACTGGACGGGCAAGCT...GGGGACTTGCATGGCACTGTATAGCATTTTAGGTCTGTTTGGGGGTGGATTAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS-3UTR CAA 90 bp | TCAGCCCCCAAAGCTCCCACCTCTTCTGGAAAAACTGGCCTTAACATAGGAACCTGCTCCCAGGGCAAATaGCTGGTGAGGGAGGCGAAG | + |
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Preference number: 5 (lower is better) Translates to: SAPKAPTSSGKTGLNIGTCSQGK*LVREAK Trigger: CTTCGCCTCCCTCACCAGCAATTTGCCCTGGGAGCA...GGTTCCTATGTTAAGGCCAGTTTTTCCAGAAGAGGTGGGAGCTTTGGGGGCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS TCA 90 bp | GGTGAGAATCAGTCCCATCAGGTACATGGCCACACAGATGAGTCCTaGGAACACTGCCTTCTTGGGCCGCAGGTAGTATGGGAACTCATC | + |
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Preference number: 5 (lower is better) Translates to: GENQSHQVHGHTDES*EHCLLGPQVVWELI Trigger: GATGAGTTCCCATACTACCTGCGGCCCAAGAAGGCAGTGTTCTCAGGACTCATCTGTGTGGCCATGTACCTGATGGGACTGATTCTCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS-3UTR CAA 90 bp | CCTAATCCACCCCCAAACAGACCTAAAATGCTATACAGTGCCATGCAAGTCCCCTCTGAGGGCTGGTACTaGACGATGCTGTACACCAGC | + |
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Preference number: 5 (lower is better) Translates to: PNPPPNRPKMLYSAMQVPSEGWY*TMLYTS Trigger: GCTGGTGTACAGCATCGTCAAGTACCAGCCCTCAGA...GGGGACTTGCATGGCACTGTATAGCATTTTAGGTCTGTTTGGGGGTGGATTAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS CCA 90 bp | TGGGCCGCAGGTAGTATGGGAACTCATCAGTCACTGCAGTCACTATaGTTTCTAGAAAGGCAAACTGGCTATCCAGGCCAAGCGTCAGAA | + |
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Preference number: 5 (lower is better) Translates to: WAAGSMGTHQSLQSL*FLERQTGYPGQASE Trigger: TTCTGACGCTTGGCCTGGATAGCCAGTTTGCCTTTCTAGAAACCATAGTGACTGCAGTGACTGATGAGTTCCCATACTACCTGCGGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS-3UTR CAA 90 bp | ACCTCTTCTGGAAAAACTGGCCTTAACATAGGAACCCACAGAGACTTTTCTGCCGTACCATCAGTGGCTTaGGTGACTGGCTCCCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: TSSGKTGLNIGTHRDFSAVPSVA*VTGSQP Trigger: TGGCTGGGAGCCAGTCACCAAAGCCACTGATGGTAC...GGCAGAAAAGTCTCTGTGGGTTCCTATGTTAAGGCCAGTTTTTCCAGAAGAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS GCA 72 bp | TCCAGCGAATCTCCCCCGGTCGGCCGATGCCCTGGCTaGCCTGTATGTGCAGGACATAGCGGCTCCAGTACT | + |
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Preference number: 6 (lower is better) Translates to: SSESPPVGRCPG*PVCAGHSGSST Trigger: AGTACTGGAGCCGCTATGTCCTGCACATACAGGGCAGCCAGGGCATCGGCCGACCGGGGGAGATTCGCTGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS CAA 72 bp | CAGAGATGGGCCCCAGTCCATAGCAGGCCGACTGGCTaGCTGAAGTCTCTCCCAGAGCGAGCCCTCCTCTCG | + |
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Preference number: 6 (lower is better) Translates to: QRWAPVHSRPTG*LKSLPERALLS Trigger: CGAGAGGAGGGCTCGCTCTGGGAGAGACTTCAGCAAGCCAGTCGGCCTGCTATGGACTGGGGCCCATCTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS CAA 90 bp | CTCTTGGGGCCTCTGTGCTCCAGGCAAAGCTCCGTGTTCCACCAGTaGCCACAGTGCTCCCAGGGCAAATTGCTGGTGAGGGAGGCGAAG | + |
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Preference number: 6 (lower is better) Translates to: LLGPLCSRQSSVFHQ*PQCSQGKLLVREAK Trigger: CTTCGCCTCCCTCACCAGCAATTTGCCCTGGGAGCACTGTGGCAACTGGTGGAACACGGAGCTTTGCCTGGAGCACAGAGGCCCCAAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS GCA 72 bp | GAAGTCCAGCTTGCCCGTCCAGTTGCCCCTGTCTGCTaGGAAGTCTACATCCAGGTCCACATCGCCCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: EVQLARPVAPVC*EVYIQVHIALV Trigger: GACCAGGGCGATGTGGACCTGGATGTAGACTTCGCAGCAGACAGGGGCAACTGGACGGGCAAGCTGGACTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS GCA 72 bp | CAGGAAGTCCAGCTTGCCCGTCCAGTTGCCCCTGTCTaGTGCGAAGTCTACATCCAGGTCCACATCGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: QEVQLARPVAPV*CEVYIQVHIAL Trigger: CAGGGCGATGTGGACCTGGATGTAGACTTCGCAGCAGACAGGGGCAACTGGACGGGCAAGCTGGACTTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS GCA 72 bp | CGCAGTAGCCGATGCAGGACAGCAGGAAGTCCAGCTTaGCCGTCCAGTTGCCCCTGTCTGCTGCGAAGTCTA | + |
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Preference number: 6 (lower is better) Translates to: RSSRCRTAGSPA*PSSCPCLLRSL Trigger: TAGACTTCGCAGCAGACAGGGGCAACTGGACGGGCAAGCTGGACTTCCTGCTGTCCTGCATCGGCTACTGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS CCA 72 bp | CACATCGCCCTGGTCACTGGGAGTCATCAGCAGGTCTaGGGTGATGGGCTTGCGGAGGTGAGCTTCTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: HIALVTGSHQQV*GDGLAEVSFLE Trigger: CTCCAAGAAGCTCACCTCCGCAAGCCCATCACCCCAGACCTGCTGATGACTCCCAGTGACCAGGGCGATGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS GCA 72 bp | TGCAGGACAGCAGGAAGTCCAGCTTGCCCGTCCAGTTaGCCCTGTCTGCTGCGAAGTCTACATCCAGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: CRTAGSPACPSS*PCLLRSLHPGP Trigger: TGGACCTGGATGTAGACTTCGCAGCAGACAGGGGCAACTGGACGGGCAAGCTGGACTTCCTGCTGTCCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS GCA 72 bp | TCCAGGCAAAGCTCCGTGTTCCACCAGTTGCCACAGTaGTCCCAGGGCAAATTGCTGGTGAGGGAGGCGAAG | + |
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Preference number: 6 (lower is better) Translates to: SRQSSVFHQLPQ*SQGKLLVREAK Trigger: CTTCGCCTCCCTCACCAGCAATTTGCCCTGGGAGCACTGTGGCAACTGGTGGAACACGGAGCTTTGCCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS CAA 72 bp | ATGCAGGACAGCAGGAAGTCCAGCTTGCCCGTCCAGTaGCCCCTGTCTGCTGCGAAGTCTACATCCAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: MQDSRKSSLPVQ*PLSAAKSTSRS Trigger: GGACCTGGATGTAGACTTCGCAGCAGACAGGGGCAACTGGACGGGCAAGCTGGACTTCCTGCTGTCCTGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS CAA 90 bp | CTGACGGTGCTGCTGAGGTTAAGAGGCAGCACCCCATTACCACTCTaGGGGCCTCTGTGCTCCAGGCAAAGCTCCGTGTTCCACCAGTTG | + |
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Preference number: 6 (lower is better) Translates to: LTVLLRLRGSTPLPL*GPLCSRQSSVFHQL Trigger: CAACTGGTGGAACACGGAGCTTTGCCTGGAGCACAGAGGCCCCAAGAGTGGTAATGGGGTGCTGCCTCTTAACCTCAGCAGCACCGTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS CAA 90 bp | TCCACCTCAATGGCCGTGTTCTCGAAGCTGGTGATGCCCCCGTATTaGCGCATGTGTACCATCAGTGGCTTTGGTGACTGGCTCCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: STSMAVFSKLVMPPY*RMCTISGFGDWLPA Trigger: GGCTGGGAGCCAGTCACCAAAGCCACTGATGGTACACATGCGCAAATACGGGGGCATCACCAGCTTCGAGAACACGGCCATTGAGGTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS CCA 72 bp | TCTGCTGCGAAGTCTACATCCAGGTCCACATCGCCCTaGTCACTGGGAGTCATCAGCAGGTCTGGGGTGATG | + |
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Preference number: 6 (lower is better) Translates to: SAAKSTSRSTSP*SLGVISRSGVM Trigger: CATCACCCCAGACCTGCTGATGACTCCCAGTGACCAGGGCGATGTGGACCTGGATGTAGACTTCGCAGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS CAA 72 bp | CTGCTGAGGTTAAGAGGCAGCACCCCATTACCACTCTaGGGGCCTCTGTGCTCCAGGCAAAGCTCCGTGTTC | + |
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Preference number: 6 (lower is better) Translates to: LLRLRGSTPLPL*GPLCSRQSSVF Trigger: GAACACGGAGCTTTGCCTGGAGCACAGAGGCCCCAAGAGTGGTAATGGGGTGCTGCCTCTTAACCTCAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS TCA 72 bp | CACGGTCCACCTCAATGGCCGTGTTCTCGAAGCTGGTaGTGCCCCCGTATTTGCGCATGTGTACCATCAGTG | + |
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Preference number: 6 (lower is better) Translates to: HGPPQWPCSRSW*CPRICACVPSV Trigger: CACTGATGGTACACATGCGCAAATACGGGGGCATCACCAGCTTCGAGAACACGGCCATTGAGGTGGACCGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS CCA 72 bp | AAGCCTAGCATCATGTGGATATCTCGGCAGAACCGCTaGATGCCATATACCCGGGTGACAGCGAGGCACGTG | + |
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Preference number: 6 (lower is better) Translates to: KPSIMWISRQNR*MPYTRVTARHV Trigger: CACGTGCCTCGCTGTCACCCGGGTATATGGCATCCAGCGGTTCTGCCGAGATATCCACATGATGCTAGGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS CCA 72 bp | GCCCTCCTCTCGAAGCACAGCTACCAGCATACCAGCTaGGATCATGAGGCAAGAGAGCAGACCCATCAGGAT | + |
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Preference number: 6 (lower is better) Translates to: ALLSKHSYQHTS*DHEAREQTHQD Trigger: ATCCTGATGGGTCTGCTCTCTTGCCTCATGATCCCAGCTGGTATGCTGGTAGCTGTGCTTCGAGAGGAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS TCA 72 bp | CAGTCCCATCAGGTACATGGCCACACAGATGAGTCCTaGGAACACTGCCTTCTTGGGCCGCAGGTAGTATGG | + |
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Preference number: 6 (lower is better) Translates to: QSHQVHGHTDES*EHCLLGPQVVW Trigger: CCATACTACCTGCGGCCCAAGAAGGCAGTGTTCTCAGGACTCATCTGTGTGGCCATGTACCTGATGGGACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS TCA 72 bp | CTCGAAGCACAGCTACCAGCATACCAGCTGGGATCATaGGGCAAGAGAGCAGACCCATCAGGATGCCTAGCA | + |
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Preference number: 6 (lower is better) Translates to: LEAQLPAYQLGS*GKRADPSGCLA Trigger: TGCTAGGCATCCTGATGGGTCTGCTCTCTTGCCTCATGATCCCAGCTGGTATGCTGGTAGCTGTGCTTCGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS CAA 72 bp | ATGGCCGTGTTCTCGAAGCTGGTGATGCCCCCGTATTaGCGCATGTGTACCATCAGTGGCTTTGGTGACTGG | + |
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Preference number: 6 (lower is better) Translates to: MAVFSKLVMPPY*RMCTISGFGDW Trigger: CCAGTCACCAAAGCCACTGATGGTACACATGCGCAAATACGGGGGCATCACCAGCTTCGAGAACACGGCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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| CDS CCA 72 bp | GTCACTGCAGTCACTATGGTTTCTAGAAAGGCAAACTaGCTATCCAGGCCAAGCGTCAGAAGCATGAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: VTAVTMVSRKAN*LSRPSVRSMKK Trigger: CTTCTTCATGCTTCTGACGCTTGGCCTGGATAGCCAGTTTGCCTTTCTAGAAACCATAGTGACTGCAGTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025520.10 |
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