Pregenerated sensors for SLC6A6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030096Ensembl transcript IDs: ENSMUST00000032185.9, ENSMUST00000205663.2
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGTGGGCTCGGGAGGCGGCTGGCCTTCCAAATCCAGGCAGGGCCTaGGGACTTGGCCCGCTGTGTCTTTGGTCTAGAATTCGATCTGGG | + |
|
Preference number: 1 (lower is better) Translates to: EWAREAAGLPNPGRA*GLGPLCLWSRIRSG Trigger: CCCAGATCGAATTCTAGACCAAAGACACAGCGGGCCAAGTCCCCAGGCCCTGCCTGGATTTGGAAGGCCAGCCGCCTCCCGAGCCCACTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR CCA 90 bp | CCATCTGACAGGCAGGACAGGATCTGGCCTGTTCCAGGCAAGGGCTaGTTGGTGAACAGCTTAGCCCTCTCTCCAGGAGGCAGGCGGACC | + |
|
Preference number: 1 (lower is better) Translates to: PSDRQDRIWPVPGKG*LVNSLALSPGGRRT Trigger: GGTCCGCCTGCCTCCTGGAGAGAGGGCTAAGCTGTTCACCAACCAGCCCTTGCCTGGAACAGGCCAGATCCTGTCCTGCCTGTCAGATGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR TCA 90 bp | TCCTCCCTCCCAGAGAGCATGGACAGCCAGTTTCCTGTGAAGGTCTaGCTCCTAGGCGATCAGATGGAGGAGGGGAGGAGGGAGCACTGC | + |
|
Preference number: 1 (lower is better) Translates to: SSLPESMDSQFPVKV*LLGDQMEEGRREHC Trigger: GCAGTGCTCCCTCCTCCCCTCCTCCATCTGATCGCCTAGGAGTCAGACCTTCACAGGAAACTGGCTGTCCATGCTCTCTGGGAGGGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR GCA 90 bp | GGGGCCGGGGTGAGCAGGGCGGTAAGGACTGGCACACGTGGGTATTaGTCTGTGTTCCATGAATATGGAGCAAGGGCCCTCATCAGCTCT | + |
|
Preference number: 1 (lower is better) Translates to: GAGVSRAVRTGTRGY*SVFHEYGARALISS Trigger: AGAGCTGATGAGGGCCCTTGCTCCATATTCATGGAACACAGAGCAATACCCACGTGTGCCAGTCCTTACCGCCCTGCTCACCCCGGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR CCA 90 bp | GGGCCCTCTGGGGCTGCCCACAGTGCCCAGCAGGGACCCTCCATTTaGGAGGTCACATCACTCTTAGGACCAAATAACATCTCCCAGGGT | + |
|
Preference number: 1 (lower is better) Translates to: GPSGAAHSAQQGPSI*EVTSLLGPNNISQG Trigger: ACCCTGGGAGATGTTATTTGGTCCTAAGAGTGATGTGACCTCCCAAATGGAGGGTCCCTGCTGGGCACTGTGGGCAGCCCCAGAGGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR GCA 90 bp | GTGGAGATAGCTTCAACTGACCGAAACTTCCCTTCGCCTTCCCTCTaGCGTCCCCTGGGGGCAAACGCCTGTCCAACAGCCAATGCAGTG | + |
|
Preference number: 1 (lower is better) Translates to: VEIASTDRNFPSPSL*RPLGANACPTANAV Trigger: CACTGCATTGGCTGTTGGACAGGCGTTTGCCCCCAGGGGACGGCAGAGGGAAGGCGAAGGGAAGTTTCGGTCAGTTGAAGCTATCTCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR CCA 90 bp | CCTGAGTGTGACCCCCACTCTGAAGCCCCAGCAGCTCCTGTGGCCTaGCTTCGGGCAGCCATACTGAGTGTTCAAGAAAGGACAGGGATT | + |
|
Preference number: 1 (lower is better) Translates to: PECDPHSEAPAAPVA*LRAAILSVQERTGI Trigger: AATCCCTGTCCTTTCTTGAACACTCAGTATGGCTGCCCGAAGCCAGGCCACAGGAGCTGCTGGGGCTTCAGAGTGGGGGTCACACTCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR TCA 90 bp | GGAGGACAGGCTGAGCACATTGCGCTCCCAGAACTCGATGACGGGTaGGGTGAAGTTGGCAGTGCTAAGGGAGACCCAGTGACTCTCGTT | + |
|
Preference number: 1 (lower is better) Translates to: GGQAEHIALPELDDG*GEVGSAKGDPVTLV Trigger: AACGAGAGTCACTGGGTCTCCCTTAGCACTGCCAACTTCACCTCACCCGTCATCGAGTTCTGGGAGCGCAATGTGCTCAGCCTGTCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205663.2 |
||
| 3UTR CCA 90 bp | CTTCAACTGACCGAAACTTCCCTTCGCCTTCCCTCTGCCGTCCCCTaGGGGCAAACGCCTGTCCAACAGCCAATGCAGTGGCTTGGAAAT | + |
|
Preference number: 1 (lower is better) Translates to: LQLTETSLRLPSAVP*GQTPVQQPMQWLGN Trigger: ATTTCCAAGCCACTGCATTGGCTGTTGGACAGGCGTTTGCCCCCAGGGGACGGCAGAGGGAAGGCGAAGGGAAGTTTCGGTCAGTTGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR CCA 90 bp | GTGCCTTCCTGGCTTGTGTCTGCATCTTGGAGAGAGGAACTGGGCTaGCACCTGTTAGACTGGTTGCTAGAGCATTGCCCCGTCCCGAGA | + |
|
Preference number: 1 (lower is better) Translates to: VPSWLVSASWREELG*HLLDWLLEHCPVPR Trigger: TCTCGGGACGGGGCAATGCTCTAGCAACCAGTCTAACAGGTGCCAGCCCAGTTCCTCTCTCCAAGATGCAGACACAAGCCAGGAAGGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR TCA 90 bp | CAGGGCGGTAAGGACTGGCACACGTGGGTATTGCTCTGTGTTCCATaGATATGGAGCAAGGGCCCTCATCAGCTCTGGCCTTTGGTTGAC | + |
|
Preference number: 1 (lower is better) Translates to: QGGKDWHTWVLLCVP*IWSKGPHQLWPLVD Trigger: GTCAACCAAAGGCCAGAGCTGATGAGGGCCCTTGCTCCATATTCATGGAACACAGAGCAATACCCACGTGTGCCAGTCCTTACCGCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR GCA 90 bp | AGGCCAGAGGCAGAGAGGGAAAAGAAACCCTCTCAGGCTACTTCCTaGATAGCCTTGGGCTACATGGAGGTCAAAGGCCTGCCCATACAC | + |
|
Preference number: 1 (lower is better) Translates to: RPEAEREKKPSQATS*IALGYMEVKGLPIH Trigger: GTGTATGGGCAGGCCTTTGACCTCCATGTAGCCCAAGGCTATGCAGGAAGTAGCCTGAGAGGGTTTCTTTTCCCTCTCTGCCTCTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR CCA 90 bp | CACTGGCCTCCCTCACCCCGGGCCCTCACCAAAATACATTCTGCTTaGGGAATACTCTGGTCACCACCCACCATGACTCCACTCAAATAC | + |
|
Preference number: 1 (lower is better) Translates to: HWPPSPRALTKIHSA*GILWSPPTMTPLKY Trigger: GTATTTGAGTGGAGTCATGGTGGGTGGTGACCAGAGTATTCCCCAAGCAGAATGTATTTTGGTGAGGGCCCGGGGTGAGGGAGGCCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR CCA 90 bp | ATCATTCATGCTGAGGGTGGGCCAGTATTTTGGCATCTTTCTTGTTaGCTGAGGGTCCATAGCCCTGCTCTCTCCTGCCCCTCAGGTCTG | + |
|
Preference number: 1 (lower is better) Translates to: IIHAEGGPVFWHLSC*LRVHSPALSCPSGL Trigger: CAGACCTGAGGGGCAGGAGAGAGCAGGGCTATGGACCCTCAGCCAACAAGAAAGATGCCAAAATACTGGCCCACCCTCAGCATGAATGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR CCA 90 bp | CTTTCACAAGAGTTTGTCAAGAGGCAAGGAAGAATAGTGCCCTCCTaGGGTACACTTGCCAGCCTGGGGTACACTCACCCTCCTGAGCTG | + |
|
Preference number: 1 (lower is better) Translates to: LSQEFVKRQGRIVPS*GTLASLGYTHPPEL Trigger: CAGCTCAGGAGGGTGAGTGTACCCCAGGCTGGCAAGTGTACCCCAGGAGGGCACTATTCTTCCTTGCCTCTTGACAAACTCTTGTGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR CCA 90 bp | GCTGCTCTGAGATCTATCATTCATGCTGAGGGTGGGCCAGTATTTTaGCATCTTTCTTGTTGGCTGAGGGTCCATAGCCCTGCTCTCTCC | + |
|
Preference number: 1 (lower is better) Translates to: AALRSIIHAEGGPVF*HLSCWLRVHSPALS Trigger: GGAGAGAGCAGGGCTATGGACCCTCAGCCAACAAGAAAGATGCCAAAATACTGGCCCACCCTCAGCATGAATGATAGATCTCAGAGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR TCA 90 bp | GGCAAACGCCTGTCCAACAGCCAATGCAGTGGCTTGGAAATCATCTaGGGTCACTACCAAGCTGGCTCTGTACTGGAACTCAGATCCTTT | + |
|
Preference number: 1 (lower is better) Translates to: GKRLSNSQCSGLEII*GHYQAGSVLELRSF Trigger: AAAGGATCTGAGTTCCAGTACAGAGCCAGCTTGGTAGTGACCTCAGATGATTTCCAAGCCACTGCATTGGCTGTTGGACAGGCGTTTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR GCA 90 bp | TTTGAAGCCAAATATATAATAAGATGCTCTGTCCTTCAGGGAACATaGCAGAACATGCCTGTAATGACAATGACACCACTCCTCCCTCCC | + |
|
Preference number: 1 (lower is better) Translates to: FEAKYIIRCSVLQGT*QNMPVMTMTPLLPP Trigger: GGGAGGGAGGAGTGGTGTCATTGTCATTACAGGCATGTTCTGGCATGTTCCCTGAAGGACAGAGCATCTTATTATATATTTGGCTTCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR CCA 90 bp | CATAAGTGCCTTGGATCAGGGCCCTCTGGGGCTGCCCACAGTGCCCAGCAGGGAAATCCAGGCAGGGCCTaGGGACTTGGCCCGCTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: HKCLGSGPSGAAHSAQQGNPGRA*GLGPLC Trigger: ACACAGCGGGCCAAGTCCCCAGGCCCTGCCTGGATT...TCCCTGCTGGGCACTGTGGGCAGCCCCAGAGGGCCCTGATCCAAGGCACTTATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR CAA 90 bp | TCTGACAGGCAGGACAGGATCTGGCCTGTTCCAGGCAAGGGCTGGTaGGTGAACAGCTTAGCCCTCTCTCCAGGAGGCAGGCGGACCAGA | + |
|
Preference number: 2 (lower is better) Translates to: SDRQDRIWPVPGKGW*VNSLALSPGGRRTR Trigger: TCTGGTCCGCCTGCCTCCTGGAGAGAGGGCTAAGCTGTTCACCAACCAGCCCTTGCCTGGAACAGGCCAGATCCTGTCCTGCCTGTCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGCTTTCCATGGTAGGGTATGGAGCTGAGGTGAGGACTGGAGGCCAGAGGCAGCAGGGCCTGGGGACTTaGCCCGCTGTGTCTTTGGTC | + |
|
Preference number: 2 (lower is better) Translates to: WLSMVGYGAEVRTGGQRQQGLGT*PAVSLV Trigger: GACCAAAGACACAGCGGGCCAAGTCCCCAGGCCCTG...CTGCCTCTGGCCTCCAGTCCTCACCTCAGCTCCATACCCTACCATGGAAAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGGAGGTCACATCACTCTTAGGACCAAATAACATCTCCCAGGGTCTCCTGGGCGACACTGCTGGGGAGTaGGCTCGGGAGGCGGCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: WEVTSLLGPNNISQGLLGDTAGE*AREAAG Trigger: GCCAGCCGCCTCCCGAGCCCACTCCCCAGCAGTGTC...GCCCAGGAGACCCTGGGAGATGTTATTTGGTCCTAAGAGTGATGTGACCTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR TCA 90 bp | CTTCCCTCTGCCGTCCCCTGGGGGCAAACGCCTGTCCAACAGCCAATGCAGTGGCTGTGTTCTTCCTCCTaGACCAGCTCAGAAGGGACT | + |
|
Preference number: 2 (lower is better) Translates to: LPSAVPWGQTPVQQPMQWLCSSS*TSSEGT Trigger: AGTCCCTTCTGAGCTGGTTCAGGAGGAAGAACACAG...CCACTGCATTGGCTGTTGGACAGGCGTTTGCCCCCAGGGGACGGCAGAGGGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR GCA 90 bp | GAGGTATTTACAGTGTCCATAGGGACAGGGGTCTCAGGTTTGAGTGGGACTGTGAGGGCCCTCTGGGGCTaGCCACAGTGCCCAGCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: EVFTVSIGTGVSGLSGTVRALWG*PQCPAG Trigger: CCCTGCTGGGCACTGTGGGCAGCCCCAGAGGGCCCT...CACAGTCCCACTCAAACCTGAGACCCCTGTCCCTATGGACACTGTAAATACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR GCA 90 bp | GTTCCAGCGTCGATCCACACCTGTGGGTCCCCAAGGCGGCTGATGTCAGGGTACGGTCCCATTTCAGACTaGCTGGGTTGTCGATTCCGG | + |
|
Preference number: 2 (lower is better) Translates to: VPASIHTCGSPRRLMSGYGPISD*LGCRFR Trigger: CCGGAATCGACAACCCAGGCAGTCTGAAATGGGACC...GTACCCTGACATCAGCCGCCTTGGGGACCCACAGGTGTGGATCGACGCTGGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205663.2 |
||
| 3UTR CAA 90 bp | CTCGGGAGGCGGCTGGCCTTCCAAATCCAGGCAGGGCCTGGGGACTaGGCCCGCTGTGTCTTTGGTCTAGAATTCGATCTGGGAATGATT | + |
|
Preference number: 2 (lower is better) Translates to: LGRRLAFQIQAGPGD*ARCVFGLEFDLGMI Trigger: AATCATTCCCAGATCGAATTCTAGACCAAAGACACAGCGGGCCAAGTCCCCAGGCCCTGCCTGGATTTGGAAGGCCAGCCGCCTCCCGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR GCA 90 bp | TGGGAGGTCACATCACTCTTAGGACCAAATAACATCTCCCAGGGTCTCCTGGGCCCTTCGCCTTCCCTCTaGCGTCCCCTGGGGGCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: WEVTSLLGPNNISQGLLGPSPSL*RPLGAN Trigger: GTTTGCCCCCAGGGGACGGCAGAGGGAAGGCGAAGG...GCCCAGGAGACCCTGGGAGATGTTATTTGGTCCTAAGAGTGATGTGACCTCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR GCA 90 bp | AGTGCCCAGCAGGGACCCTCCATTTGGGAGGTCACATCACTCTTAGGACCAAATCAGGTGAGGGGACACTaGTGGGGAGTGGGCTCGGGA | + |
|
Preference number: 2 (lower is better) Translates to: SAQQGPSIWEVTSLLGPNQVRGH*WGVGSG Trigger: TCCCGAGCCCACTCCCCAGCAGTGTCCCCTCACCTG...ATTTGGTCCTAAGAGTGATGTGACCTCCCAAATGGAGGGTCCCTGCTGGGCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR CCA 90 bp | CATAAGTGCCTTGGATCAGGGCCCTCTGGGGCTGCCCACAGTGCCCAGCAGGGAGGTGGGCCAGTATTTTaGCATCTTTCTTGTTGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: HKCLGSGPSGAAHSAQQGGGPVF*HLSCWL Trigger: CAGCCAACAAGAAAGATGCCAAAATACTGGCCCACC...TCCCTGCTGGGCACTGTGGGCAGCCCCAGAGGGCCCTGATCCAAGGCACTTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGTCTGCGTGGCTTTCCATGGTAGGGTATGGAGCTGAGGTGAGGACTGGAGGCTGGAGCACTCCTTGCTaGGAGCTGCTGGATGGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: WSAWLSMVGYGAEVRTGGWSTPC*ELLDGS Trigger: AGAACCATCCAGCAGCTCCCAGCAAGGAGTGCTCCA...GCCTCCAGTCCTCACCTCAGCTCCATACCCTACCATGGAAAGCCACGCAGACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR TCA 90 bp | AGGCAAGGAAGAATAGTGCCCTCCTGGGGTACACTTGCCAGCCTGGGGTACACTGGTCACCACCCACCATaGCTCCACTCAAATACCGCA | + |
|
Preference number: 2 (lower is better) Translates to: RQGRIVPSWGTLASLGYTGHHPP*LHSNTA Trigger: TGCGGTATTTGAGTGGAGTCATGGTGGGTGGTGACC...AGTGTACCCCAGGCTGGCAAGTGTACCCCAGGAGGGCACTATTCTTCCTTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGTCTGCGTGGCTTTCCATGGTAGGGTATGGAGCTGAGGTGAGGACTGGAGGCGCTTGGGGAATACTCTaGTCACCACCCACCATGACT | + |
|
Preference number: 2 (lower is better) Translates to: WSAWLSMVGYGAEVRTGGAWGIL*SPPTMT Trigger: AGTCATGGTGGGTGGTGACCAGAGTATTCCCCAAGC...GCCTCCAGTCCTCACCTCAGCTCCATACCCTACCATGGAAAGCCACGCAGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR TCA 90 bp | AGGCAAGGAAGAATAGTGCCCTCCTGGGGTACACTTGCCAGCCTGGGGTACACTATCTTTCTTGTTGGCTaGGGGTCCATAGCCCTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: RQGRIVPSWGTLASLGYTIFLVG*GSIALL Trigger: GAGCAGGGCTATGGACCCTCAGCCAACAAGAAAGAT...AGTGTACCCCAGGCTGGCAAGTGTACCCCAGGAGGGCACTATTCTTCCTTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR TCA 90 bp | TGGCTTTCCATGGTAGGGTATGGAGCTGAGGTGAGGACTGGAGGCCAGAGGCAGCCGCTTCAGCTGCTCTaGGATCTATCATTCATGCTG | + |
|
Preference number: 2 (lower is better) Translates to: WLSMVGYGAEVRTGGQRQPLQLL*DLSFML Trigger: CAGCATGAATGATAGATCTCAGAGCAGCTGAAGCGG...CTGCCTCTGGCCTCCAGTCCTCACCTCAGCTCCATACCCTACCATGGAAAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR CAA 90 bp | CTGTACTGGAACTCAGATCCTTTAAGATCCAGGGTCTACAGCCACTaGGAGCACTCCTTGCTGGGAGCTGCTGGATGGTTCTGGGGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: LYWNSDPLRSRVYSH*EHSLLGAAGWFWGG Trigger: ACCACCCCAGAACCATCCAGCAGCTCCCAGCAAGGAGTGCTCCAAGTGGCTGTAGACCCTGGATCTTAAAGGATCTGAGTTCCAGTACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR CAA 90 bp | AGCAAGGGCCCTCATCAGCTCTGGCCTTTGGTTGACAGGGAAGGCTaGACAGTTTACTTAGACAATGCCCTGGACCTGCCTTCCCTCTAC | + |
|
Preference number: 2 (lower is better) Translates to: SKGPHQLWPLVDREG*TVYLDNALDLPSLY Trigger: GTAGAGGGAAGGCAGGTCCAGGGCATTGTCTAAGTAAACTGTCAAGCCTTCCCTGTCAACCAAAGGCCAGAGCTGATGAGGGCCCTTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR TCA 90 bp | TATACTGCAAGACAGGTCACACACCAAGGATCCTTCAAACACAAACGCTCCTCCGAGAGTGGGGGCCACTaGAGACAGGTGAGGGGACAC | + |
|
Preference number: 2 (lower is better) Translates to: YTARQVTHQGSFKHKRSSESGGH*RQVRGH Trigger: GTGTCCCCTCACCTGTCTTCAGTGGCCCCCACTCTC...GGAGGAGCGTTTGTGTTTGAAGGATCCTTGGTGTGTGACCTGTCTTGCAGTATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR TCA 90 bp | CACACCAAGGATCCTTCAAACACAAACGCTCCTCCCCTTCTTGATTGGTTTCAGGGTATGGAGCTGAGGTaGGGACTGGAGGCCAGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: HTKDPSNTNAPPLLDWFQGMELR*GLEARG Trigger: GCCTCTGGCCTCCAGTCCTCACCTCAGCTCCATACC...CTGAAACCAATCAAGAAGGGGAGGAGCGTTTGTGTTTGAAGGATCCTTGGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR CCA 90 bp | AATGACTCAAATGTCCAGTTCCACTTAGCTCACAGTGTAAGTCCCCACACTAGGGGGCCCAGTGGAGGCTaGGGTGAAGGTGTAGTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: NDSNVQFHLAHSVSPHTRGPSGG*GEGVVP Trigger: GGGCACTACACCTTCACCCCAGCCTCCACTGGGCCC...CCTAGTGTGGGGACTTACACTGTGAGCTAAGTGGAACTGGACATTTGAGTCATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR CCA 90 bp | CTAGCTAAGGCTCTTCACACTAGTGATGTCTTTGGCCCTCAGTTTCCTGTGGTATCAGGATGGCACAGTTaGGCCCAGTGGAGGCTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: LAKALHTSDVFGPQFPVVSGWHS*AQWRLG Trigger: CCCCAGCCTCCACTGGGCCCAACTGTGCCATCCTGA...TACCACAGGAAACTGAGGGCCAAAGACATCACTAGTGTGAAGAGCCTTAGCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR CCA 90 bp | AGGAAGGGGTGTGCACACAGAGGTATTTACAGTGTCCATAGGGACAGGGGTCTCGGCCCTCATCAGCTCTaGCCTTTGGTTGACAGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: RKGCAHRGIYSVHRDRGLGPHQL*PLVDRE Trigger: TTCCCTGTCAACCAAAGGCCAGAGCTGATGAGGGCC...GAGACCCCTGTCCCTATGGACACTGTAAATACCTCTGTGTGCACACCCCTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR GCA 90 bp | TGGTCTGCGTGGCTTTCCATGGTAGGGTATGGAGCTGAGGTGAGGACTGGAGGCGGCACACGTGGGTATTaGTCTGTGTTCCATGAATAT | + |
|
Preference number: 2 (lower is better) Translates to: WSAWLSMVGYGAEVRTGGGTRGY*SVFHEY Trigger: ATATTCATGGAACACAGAGCAATACCCACGTGTGCC...GCCTCCAGTCCTCACCTCAGCTCCATACCCTACCATGGAAAGCCACGCAGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR CCA 90 bp | TATACTGCAAGACAGGTCACACACCAAGGATCCTTCAAACACAAACGCTCCTCCCCCGAGAGGCAGGACTaGAATGCTGTCGGCCATGGT | + |
|
Preference number: 2 (lower is better) Translates to: YTARQVTHQGSFKHKRSSPERQD*NAVGHG Trigger: ACCATGGCCGACAGCATTCCAGTCCTGCCTCTCGGG...GGAGGAGCGTTTGTGTTTGAAGGATCCTTGGTGTGTGACCTGTCTTGCAGTATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR CCA 90 bp | AGGAAGGGGTGTGCACACAGAGGTATTTACAGTGTCCATAGGGACAGGGGTCTCCTTGTGTCTGCATCTTaGAGAGAGGAACTGGGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: RKGCAHRGIYSVHRDRGLLVSAS*REELGW Trigger: CCAGCCCAGTTCCTCTCTCCAAGATGCAGACACAAG...GAGACCCCTGTCCCTATGGACACTGTAAATACCTCTGTGTGCACACCCCTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR CCA 90 bp | TTTTGGGTAGGCAATGAAGGCCAAGCCAGGACCTGTACGAGTTATACTTGTACTGCCTTCACCAGCACCTaGCAGGGTCAGTCCACGGAC | + |
|
Preference number: 2 (lower is better) Translates to: FWVGNEGQARTCTSYTCTAFTST*QGQSTD Trigger: GTCCGTGGACTGACCCTGCCAGGTGCTGGTGAAGGC...AGTACAAGTATAACTCGTACAGGTCCTGGCTTGGCCTTCATTGCCTACCCAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205663.2 |
||
| 3UTR CAA 90 bp | TCAGATCCTTTAAGATCCAGGGTCTACAGCCACTTGGAGCACTCCTaGCTGGGAGCTGCTGGATGGTTCTGGGGTGGTAACTTTCACAAG | + |
|
Preference number: 2 (lower is better) Translates to: SDPLRSRVYSHLEHS*LGAAGWFWGGNFHK Trigger: CTTGTGAAAGTTACCACCCCAGAACCATCCAGCAGCTCCCAGCAAGGAGTGCTCCAAGTGGCTGTAGACCCTGGATCTTAAAGGATCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR TCA 90 bp | AGGAAGGGGTGTGCACACAGAGGTATTTACAGTGTCCATAGGGACAGGGGTCTCTTGCTCTGTGTTCCATaGATATGGAGCAAGGGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: RKGCAHRGIYSVHRDRGLLLCVP*IWSKGP Trigger: AGGGCCCTTGCTCCATATTCATGGAACACAGAGCAA...GAGACCCCTGTCCCTATGGACACTGTAAATACCTCTGTGTGCACACCCCTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR TCA 90 bp | AGCTTTTGGGTAGGCAATGAAGGCCAAGCCAGGACCTGTACGAGTTATACTTGTGTTATAGCTTCCCAGTaGGGTCATGGCCCCCAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: SFWVGNEGQARTCTSYTCVIASQ*GHGPQA Trigger: TGCCTGGGGGCCATGACCTCACTGGGAAGCTATAAC...ACAAGTATAACTCGTACAGGTCCTGGCTTGGCCTTCATTGCCTACCCAAAAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205663.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCACACTAGTGATGTCTTTGGCCCTCAGTTTCCTGTGGTACAACTTGAGGGGACTCCTGGGGTACACTTaGCAGCCTGGGGTACACTCA | + |
|
Preference number: 2 (lower is better) Translates to: FTLVMSLALSFLWYNLRGLLGYT*QPGVHS Trigger: TGAGTGTACCCCAGGCTGGCAAGTGTACCCCAGGAG...TCCCCTCAAGTTGTACCACAGGAAACTGAGGGCCAAAGACATCACTAGTGTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR GCA 90 bp | AATGACTCAAATGTCCAGTTCCACTTAGCTCACAGTGTAAGTCCCCACACTAGGCTCCTTGCTGGGAGCTaGTGGATGGTTCTGGGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: NDSNVQFHLAHSVSPHTRLLAGS*WMVLGW Trigger: CCACCCCAGAACCATCCAGCAGCTCCCAGCAAGGAG...CCTAGTGTGGGGACTTACACTGTGAGCTAAGTGGAACTGGACATTTGAGTCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR TCA 90 bp | GAGGTATTTACAGTGTCCATAGGGACAGGGGTCTCAGGTTTGAGTGGGACTGTGTTCGGGCAGCCATACTaGGTGTTCAAGAAAGGACAG | + |
|
Preference number: 2 (lower is better) Translates to: EVFTVSIGTGVSGLSGTVFGQPY*VFKKGQ Trigger: CTGTCCTTTCTTGAACACTCAGTATGGCTGCCCGAA...CACAGTCCCACTCAAACCTGAGACCCCTGTCCCTATGGACACTGTAAATACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR TCA 90 bp | TATACTGCAAGACAGGTCACACACCAAGGATCCTTCAAACACAAACGCTCCTCCCTTCCTGTCTCCATCTaGCAGGCAGGACAGGATCTG | + |
|
Preference number: 2 (lower is better) Translates to: YTARQVTHQGSFKHKRSSLPVSI*QAGQDL Trigger: CAGATCCTGTCCTGCCTGTCAGATGGAGACAGGAAG...GGAGGAGCGTTTGTGTTTGAAGGATCCTTGGTGTGTGACCTGTCTTGCAGTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR TCA 90 bp | GCGAGTGCTGCTTTCTCCTCATGCGCTGCCATGGTCTGCGTGGCTTTCCATGGTGTAAACCTGGTCCTATaGGAATCTAACGTTAGTAAA | + |
|
Preference number: 2 (lower is better) Translates to: ASAAFSSCAAMVCVAFHGVNLVL*ESNVSK Trigger: TTTACTAACGTTAGATTCTCATAGGACCAGGTTTAC...ACCATGGAAAGCCACGCAGACCATGGCAGCGCATGAGGAGAAAGCAGCACTCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR TCA 90 bp | TTCACACTAGTGATGTCTTTGGCCCTCAGTTTCCTGTGGTACAACTTGAGGGGAGGCTTGGAAATCATCTaGGGTCACTACCAAGCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: FTLVMSLALSFLWYNLRGGLEII*GHYQAG Trigger: GCCAGCTTGGTAGTGACCTCAGATGATTTCCAAGCC...TCCCCTCAAGTTGTACCACAGGAAACTGAGGGCCAAAGACATCACTAGTGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR TCA 90 bp | TTTTGGGTAGGCAATGAAGGCCAAGCCAGGACCTGTACGAGTTATACTTGTACTGAACTCGATGACGGGTaGGGTGAAGTTGGCAGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: FWVGNEGQARTCTSYTCTELDDG*GEVGSA Trigger: AGCACTGCCAACTTCACCTCACCCGTCATCGAGTTC...AGTACAAGTATAACTCGTACAGGTCCTGGCTTGGCCTTCATTGCCTACCCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205663.2 |
||
| 3UTR-3UTR CCA 90 bp | TATACTGCAAGACAGGTCACACACCAAGGATCCTTCAAACACAAACGCTCCTCCCTGGGAGCTGCTGGATaGTTCTGGGGTGGTAACTTT | + |
|
Preference number: 2 (lower is better) Translates to: YTARQVTHQGSFKHKRSSLGAAG*FWGGNF Trigger: AAAGTTACCACCCCAGAACCATCCAGCAGCTCCCAG...GGAGGAGCGTTTGTGTTTGAAGGATCCTTGGTGTGTGACCTGTCTTGCAGTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR TCA 90 bp | TGGGAGGTCACATCACTCTTAGGACCAAATAACATCTCCCAGGGTCTCCTGGGCACATGGAAATCAATATaGAAGTCCATCCTCTTCCCC | + |
|
Preference number: 2 (lower is better) Translates to: WEVTSLLGPNNISQGLLGTWKSI*KSILFP Trigger: GGGGAAGAGGATGGACTTTCATATTGATTTCCATGT...GCCCAGGAGACCCTGGGAGATGTTATTTGGTCCTAAGAGTGATGTGACCTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR GCA 90 bp | TGGGAGGTCACATCACTCTTAGGACCAAATAACATCTCCCAGGGTCTCCTGGGCATGGTGCCATTTGTCTaGCAACCCAAAATACTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: WEVTSLLGPNNISQGLLGMVPFV*QPKILK Trigger: CTTCAGTATTTTGGGTTGGCAGACAAATGGCACCAT...GCCCAGGAGACCCTGGGAGATGTTATTTGGTCCTAAGAGTGATGTGACCTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR GCA 90 bp | TATACTGCAAGACAGGTCACACACCAAGGATCCTTCAAACACAAACGCTCCTCCTCTCAGGCTACTTCCTaGATAGCCTTGGGCTACATG | + |
|
Preference number: 2 (lower is better) Translates to: YTARQVTHQGSFKHKRSSSQATS*IALGYM Trigger: CATGTAGCCCAAGGCTATGCAGGAAGTAGCCTGAGA...GGAGGAGCGTTTGTGTTTGAAGGATCCTTGGTGTGTGACCTGTCTTGCAGTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR TCA 90 bp | CTAGCTAAGGCTCTTCACACTAGTGATGTCTTTGGCCCTCAGTTTCCTGTGGTAGTACACTCACCCTCCTaGGCTGCTAATATCATTTGG | + |
|
Preference number: 2 (lower is better) Translates to: LAKALHTSDVFGPQFPVVVHSPS*AANIIW Trigger: CCAAATGATATTAGCAGCTCAGGAGGGTGAGTGTAC...TACCACAGGAAACTGAGGGCCAAAGACATCACTAGTGTGAAGAGCCTTAGCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR CCA 90 bp | AGTGCCCAGCAGGGACCCTCCATTTGGGAGGTCACATCACTCTTAGGACCAAATCAGGACGTAGGCCTATaGGTTTTCTTTTTGTACAAA | + |
|
Preference number: 2 (lower is better) Translates to: SAQQGPSIWEVTSLLGPNQDVGL*VFFLYK Trigger: TTTGTACAAAAAGAAAACCCATAGGCCTACGTCCTG...ATTTGGTCCTAAGAGTGATGTGACCTCCCAAATGGAGGGTCCCTGCTGGGCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR CCA 90 bp | AACAGCCACTGGAAGAGGATTAGAGGGTCACTTGGCAGAGTACATTGCTTTGGAGCCAATGCAGTGGCTTaGAAATCATCTGAGGTCACT | + |
|
Preference number: 2 (lower is better) Translates to: NSHWKRIRGSLGRVHCFGANAVA*KSSEVT Trigger: AGTGACCTCAGATGATTTCCAAGCCACTGCATTGGC...TCCAAAGCAATGTACTCTGCCAAGTGACCCTCTAATCCTCTTCCAGTGGCTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR GCA 90 bp | TTCACACTAGTGATGTCTTTGGCCCTCAGTTTCCTGTGGTACAACTTGAGGGGACACCAAAATACATTCTaGTTGGGGAATACTCTGGTC | + |
|
Preference number: 2 (lower is better) Translates to: FTLVMSLALSFLWYNLRGHQNTF*LGNTLV Trigger: GACCAGAGTATTCCCCAAGCAGAATGTATTTTGGTG...TCCCCTCAAGTTGTACCACAGGAAACTGAGGGCCAAAGACATCACTAGTGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR TCA 90 bp | CACACCAAGGATCCTTCAAACACAAACGCTCCTCCCCTTCTTGATTGGTTTCAGACTTACATGCAGACGTaGAAAGACAAGCATCACAAT | + |
|
Preference number: 2 (lower is better) Translates to: HTKDPSNTNAPPLLDWFQTYMQT*KDKHHN Trigger: ATTGTGATGCTTGTCTTTTCACGTCTGCATGTAAGT...CTGAAACCAATCAAGAAGGGGAGGAGCGTTTGTGTTTGAAGGATCCTTGGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR CAA 90 bp | TGGGCAGAACTTTCTGCCAGCTATATAAGCACCGAAGAATTGCTTTaGAAAAACGAGATCCATTGCTGGCAAGACCAATTCAAGTGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: WAELSASYISTEELL*KNEIHCWQDQFKWQ Trigger: TTGCCACTTGAATTGGTCTTGCCAGCAATGGATCTCGTTTTTCAAAAGCAATTCTTCGGTGCTTATATAGCTGGCAGAAAGTTCTGCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR GCA 72 bp | GCTTCAACTGACCGAAACTTCCCTTCGCCTTCCCTCTaGCGTCCCCTGGGGGCAAACGCCTGTCCAACAGCC | + |
|
Preference number: 3 (lower is better) Translates to: ASTDRNFPSPSL*RPLGANACPTA Trigger: GGCTGTTGGACAGGCGTTTGCCCCCAGGGGACGGCAGAGGGAAGGCGAAGGGAAGTTTCGGTCAGTTGAAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR CCA 72 bp | ACCGAAACTTCCCTTCGCCTTCCCTCTGCCGTCCCCTaGGGGCAAACGCCTGTCCAACAGCCAATGCAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: TETSLRLPSAVP*GQTPVQQPMQW Trigger: CCACTGCATTGGCTGTTGGACAGGCGTTTGCCCCCAGGGGACGGCAGAGGGAAGGCGAAGGGAAGTTTCGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR CCA 72 bp | CGGGAGGCGGCTGGCCTTCCAAATCCAGGCAGGGCCTaGGGACTTGGCCCGCTGTGTCTTTGGTCTAGAATT | + |
|
Preference number: 3 (lower is better) Translates to: REAAGLPNPGRA*GLGPLCLWSRI Trigger: AATTCTAGACCAAAGACACAGCGGGCCAAGTCCCCAGGCCCTGCCTGGATTTGGAAGGCCAGCCGCCTCCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGAGTTCCAGCGTCGATCCACACCTGTGGGTCCCCAAGGCGGCTGATGTCAGGACGGGTGAGGTGAAGTaGGCAGTGCTAAGGGAGACC | + |
|
Preference number: 3 (lower is better) Translates to: LSSSVDPHLWVPKAADVRTGEVK*AVLRET Trigger: GGTCTCCCTTAGCACTGCCAACTTCACCTCACCCGT...CCTGACATCAGCCGCCTTGGGGACCCACAGGTGTGGATCGACGCTGGAACTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205663.2 |
||
| 3UTR GCA 72 bp | TCCTGTGCAGAGGGGGCGAGTGCTGCTTTCTCCTCATaGGCTGCCATGGTCTGCGTGGCTTTCCATGGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: SCAEGASAAFSS*AAMVCVAFHGR Trigger: CCTACCATGGAAAGCCACGCAGACCATGGCAGCGCATGAGGAGAAAGCAGCACTCGCCCCCTCTGCACAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR GCA 72 bp | GATAGAGAAAGCCCCTTCCTGTGCAGAGGGGGCGAGTaGTGCTTTCTCCTCATGCGCTGCCATGGTCTGCGT | + |
|
Preference number: 3 (lower is better) Translates to: DRESPFLCRGGE*CFLLMRCHGLR Trigger: ACGCAGACCATGGCAGCGCATGAGGAGAAAGCAGCACTCGCCCCCTCTGCACAGGAAGGGGCTTTCTCTATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR CCA 72 bp | AGGGGGCGAGTGCTGCTTTCTCCTCATGCGCTGCCATaGTCTGCGTGGCTTTCCATGGTAGGGTATGGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: RGRVLLSPHALP*SAWLSMVGYGA Trigger: AGCTCCATACCCTACCATGGAAAGCCACGCAGACCATGGCAGCGCATGAGGAGAAAGCAGCACTCGCCCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTTTCCATGGTAGGGTATGGAGCTGAGGTGAGGACTGGAGGCCAGAGGCAGGATTACATAAGTGCCTaGGATCAGGGCCCTCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: WLSMVGYGAEVRTGGQRQDYISA*DQGPLG Trigger: CCCCAGAGGGCCCTGATCCAAGGCACTTATGTAATC...CTGCCTCTGGCCTCCAGTCCTCACCTCAGCTCCATACCCTACCATGGAAAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR TCA 72 bp | CCAGAGAGCATGGACAGCCAGTTTCCTGTGAAGGTCTaGCTCCTAGGCGATCAGATGGAGGAGGGGAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: PESMDSQFPVKV*LLGDQMEEGRR Trigger: CCTCCTCCCCTCCTCCATCTGATCGCCTAGGAGTCAGACCTTCACAGGAAACTGGCTGTCCATGCTCTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR TCA 72 bp | GCTGAGCACATTGCGCTCCCAGAACTCGATGACGGGTaGGGTGAAGTTGGCAGTGCTAAGGGAGACCCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: AEHIALPELDDG*GEVGSAKGDPV Trigger: CACTGGGTCTCCCTTAGCACTGCCAACTTCACCTCACCCGTCATCGAGTTCTGGGAGCGCAATGTGCTCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205663.2 |
||
| 3UTR GCA 72 bp | GTGGTGACACACTGTGATAGAGAAAGCCCCTTCCTGTaGAGAGGGGGCGAGTGCTGCTTTCTCCTCATGCGC | + |
|
Preference number: 3 (lower is better) Translates to: VVTHCDRESPFL*RGGECCFLLMR Trigger: GCGCATGAGGAGAAAGCAGCACTCGCCCCCTCTGCACAGGAAGGGGCTTTCTCTATCACAGTGTGTCACCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR CCA 72 bp | GCTGAGGGTGGGCCAGTATTTTGGCATCTTTCTTGTTaGCTGAGGGTCCATAGCCCTGCTCTCTCCTGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: AEGGPVFWHLSC*LRVHSPALSCP Trigger: GGGGCAGGAGAGAGCAGGGCTATGGACCCTCAGCCAACAAGAAAGATGCCAAAATACTGGCCCACCCTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR TCA 72 bp | GGGTACACTTGCCAGCCTGGGGTACACTCACCCTCCTaGGCTGCTAATATCATTTGGTCCACTGGCCTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: GYTCQPGVHSPS*AANIIWSTGLP Trigger: AGGGAGGCCAGTGGACCAAATGATATTAGCAGCTCAGGAGGGTGAGTGTACCCCAGGCTGGCAAGTGTACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR TCA 72 bp | CGAGAGGCAGGACTGGAATGCTGTCGGCCATGGTGGTaGCACACTGTGATAGAGAAAGCCCCTTCCTGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: REAGLECCRPWW*HTVIEKAPSCA Trigger: TGCACAGGAAGGGGCTTTCTCTATCACAGTGTGTCACCACCATGGCCGACAGCATTCCAGTCCTGCCTCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR GCA 72 bp | GTGAGCAGGGCGGTAAGGACTGGCACACGTGGGTATTaGTCTGTGTTCCATGAATATGGAGCAAGGGCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: VSRAVRTGTRGY*SVFHEYGARAL Trigger: GAGGGCCCTTGCTCCATATTCATGGAACACAGAGCAATACCCACGTGTGCCAGTCCTTACCGCCCTGCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR CCA 72 bp | CCCTCACCCCGGGCCCTCACCAAAATACATTCTGCTTaGGGAATACTCTGGTCACCACCCACCATGACTCCA | + |
|
Preference number: 3 (lower is better) Translates to: PSPRALTKIHSA*GILWSPPTMTP Trigger: TGGAGTCATGGTGGGTGGTGACCAGAGTATTCCCCAAGCAGAATGTATTTTGGTGAGGGCCCGGGGTGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR CCA 72 bp | CCCTGGGGGCAAACGCCTGTCCAACAGCCAATGCAGTaGCTTGGAAATCATCTGAGGTCACTACCAAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: PWGQTPVQQPMQ*LGNHLRSLPSW Trigger: CCAGCTTGGTAGTGACCTCAGATGATTTCCAAGCCACTGCATTGGCTGTTGGACAGGCGTTTGCCCCCAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR CCA 72 bp | GGGGCTGCCCACAGTGCCCAGCAGGGACCCTCCATTTaGGAGGTCACATCACTCTTAGGACCAAATAACATC | + |
|
Preference number: 3 (lower is better) Translates to: GAAHSAQQGPSI*EVTSLLGPNNI Trigger: GATGTTATTTGGTCCTAAGAGTGATGTGACCTCCCAAATGGAGGGTCCCTGCTGGGCACTGTGGGCAGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGTCTGCGTGGCTTTCCATGGTAGGGTATGGAGCTGAGGTGAGGACTGGAGGCGGGTGGGCCAGTATTTaGGCATCTTTCTTGTTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: WSAWLSMVGYGAEVRTGGGWASI*ASFLLA Trigger: AGCCAACAAGAAAGATGCCAAAATACTGGCCCACCC...GCCTCCAGTCCTCACCTCAGCTCCATACCCTACCATGGAAAGCCACGCAGACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR CAA 90 bp | TATACTGCAAGACAGGTCACACACCAAGGATCCTTCAAACACAAACGCTCCTCCGCAGGGCCTGGGGACTaGGCCCGCTGTGTCTTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: YTARQVTHQGSFKHKRSSAGPGD*ARCVFG Trigger: ACCAAAGACACAGCGGGCCAAGTCCCCAGGCCCTGC...GGAGGAGCGTTTGTGTTTGAAGGATCCTTGGTGTGTGACCTGTCTTGCAGTATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR CCA 72 bp | TGGCTTGTGTCTGCATCTTGGAGAGAGGAACTGGGCTaGCACCTGTTAGACTGGTTGCTAGAGCATTGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: WLVSASWREELG*HLLDWLLEHCP Trigger: GGGGCAATGCTCTAGCAACCAGTCTAACAGGTGCCAGCCCAGTTCCTCTCTCCAAGATGCAGACACAAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR CCA 72 bp | TACAGTGTCCATAGGGACAGGGGTCTCAGGTTTGAGTaGGACTGTGAGGGGCCTTCTCTAAGGTGCCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: YSVHRDRGLRFE*DCEGPSLRCLP Trigger: AGGAAGGCACCTTAGAGAAGGCCCCTCACAGTCCCACTCAAACCTGAGACCCCTGTCCCTATGGACACTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR TCA 72 bp | AGGCGTTTGGCCCTGGTACAACCGCTTCAGCTGCTCTaGGATCTATCATTCATGCTGAGGGTGGGCCAGTAT | + |
|
Preference number: 3 (lower is better) Translates to: RRLALVQPLQLL*DLSFMLRVGQY Trigger: ATACTGGCCCACCCTCAGCATGAATGATAGATCTCAGAGCAGCTGAAGCGGTTGTACCAGGGCCAAACGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR TCA 72 bp | AAGGACTGGCACACGTGGGTATTGCTCTGTGTTCCATaGATATGGAGCAAGGGCCCTCATCAGCTCTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: KDWHTWVLLCVP*IWSKGPHQLWP Trigger: AGGCCAGAGCTGATGAGGGCCCTTGCTCCATATTCATGGAACACAGAGCAATACCCACGTGTGCCAGTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR GCA 72 bp | GCAGAGAGGGAAAAGAAACCCTCTCAGGCTACTTCCTaGATAGCCTTGGGCTACATGGAGGTCAAAGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: AEREKKPSQATS*IALGYMEVKGL Trigger: CAGGCCTTTGACCTCCATGTAGCCCAAGGCTATGCAGGAAGTAGCCTGAGAGGGTTTCTTTTCCCTCTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR CCA 72 bp | TTCTCTAAGGTGCCTTCCTGGCTTGTGTCTGCATCTTaGAGAGAGGAACTGGGCTGGCACCTGTTAGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: FSKVPSWLVSAS*REELGWHLLDW Trigger: CCAGTCTAACAGGTGCCAGCCCAGTTCCTCTCTCCAAGATGCAGACACAAGCCAGGAAGGCACCTTAGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR CAA 90 bp | CACACCAAGGATCCTTCAAACACAAACGCTCCTCCCCTTCTTGATTGGTTTCAGCACTTGGAGCACTCCTaGCTGGGAGCTGCTGGATGG | + |
|
Preference number: 3 (lower is better) Translates to: HTKDPSNTNAPPLLDWFQHLEHS*LGAAGW Trigger: CCATCCAGCAGCTCCCAGCAAGGAGTGCTCCAAGTG...CTGAAACCAATCAAGAAGGGGAGGAGCGTTTGTGTTTGAAGGATCCTTGGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR GCA 72 bp | CTTTCTCAGGCCATTTCCAGAATGGTGCCATTTGTCTaGCAACCCAAAATACTGAAGGCTCGCCAGAGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: LSQAISRMVPFV*QPKILKARQRG Trigger: GCCCCTCTGGCGAGCCTTCAGTATTTTGGGTTGGCAGACAAATGGCACCATTCTGGAAATGGCCTGAGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR CCA 72 bp | TTGGAGCACTCCTTGCTGGGAGCTGCTGGATGGTTCTaGGGTGGTAACTTTCACAAGAGTTTGTCAAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LEHSLLGAAGWF*GGNFHKSLSRG Trigger: GCCTCTTGACAAACTCTTGTGAAAGTTACCACCCCAGAACCATCCAGCAGCTCCCAGCAAGGAGTGCTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR CCA 72 bp | AGCCACTTGGAGCACTCCTTGCTGGGAGCTGCTGGATaGTTCTGGGGTGGTAACTTTCACAAGAGTTTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: SHLEHSLLGAAG*FWGGNFHKSLS Trigger: TGACAAACTCTTGTGAAAGTTACCACCCCAGAACCATCCAGCAGCTCCCAGCAAGGAGTGCTCCAAGTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTTGTGTCTGCATCTTGGAGAGAGGAACTGGGCTGGCACCTGTTAGACTGGCCAGAATGGTGCCATTaGTCTGCCAACCCAAAATAC | + |
|
Preference number: 3 (lower is better) Translates to: WLVSASWREELGWHLLDWPEWCH*SANPKY Trigger: GTATTTTGGGTTGGCAGACAAATGGCACCATTCTGG...CCAGTCTAACAGGTGCCAGCCCAGTTCCTCTCTCCAAGATGCAGACACAAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR CAA 90 bp | CACACCAAGGATCCTTCAAACACAAACGCTCCTCCCCTTCTTGATTGGTTTCAGAGGTGCCTTCCTGGCTaGTGTCTGCATCTTGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: HTKDPSNTNAPPLLDWFQRCLPG*CLHLGE Trigger: CTCTCCAAGATGCAGACACAAGCCAGGAAGGCACCT...CTGAAACCAATCAAGAAGGGGAGGAGCGTTTGTGTTTGAAGGATCCTTGGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR CCA 72 bp | TGTCTTCTTCCAAGTAAGAGGGCAGGCGTTTGGCCCTaGTACAACCGCTTCAGCTGCTCTGAGATCTATCAT | + |
|
Preference number: 3 (lower is better) Translates to: CLLPSKRAGVWP*YNRFSCSEIYH Trigger: ATGATAGATCTCAGAGCAGCTGAAGCGGTTGTACCAGGGCCAAACGCCTGCCCTCTTACTTGGAAGAAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR CCA 72 bp | GCCCTCACCAAAATACATTCTGCTTGGGGAATACTCTaGTCACCACCCACCATGACTCCACTCAAATACCGC | + |
|
Preference number: 3 (lower is better) Translates to: ALTKIHSAWGIL*SPPTMTPLKYR Trigger: GCGGTATTTGAGTGGAGTCATGGTGGGTGGTGACCAGAGTATTCCCCAAGCAGAATGTATTTTGGTGAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR CCA 72 bp | AGATCTATCATTCATGCTGAGGGTGGGCCAGTATTTTaGCATCTTTCTTGTTGGCTGAGGGTCCATAGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: RSIIHAEGGPVF*HLSCWLRVHSP Trigger: AGGGCTATGGACCCTCAGCCAACAAGAAAGATGCCAAAATACTGGCCCACCCTCAGCATGAATGATAGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR TCA 72 bp | CCTCCTGAACCAGCTCAGAAGGGACTACACCGTTCTTaGAGATGTATCCACTATCATAGGAAAATTCCACCC | + |
|
Preference number: 3 (lower is better) Translates to: PPEPAQKGLHRS*RCIHYHRKIPP Trigger: GGGTGGAATTTTCCTATGATAGTGGATACATCTTCAAGAACGGTGTAGTCCCTTCTGAGCTGGTTCAGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR TCA 72 bp | AACCGCTTCAGCTGCTCTGAGATCTATCATTCATGCTaGGGGTGGGCCAGTATTTTGGCATCTTTCTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: NRFSCSEIYHSC*GWASILASFLL Trigger: CAACAAGAAAGATGCCAAAATACTGGCCCACCCTCAGCATGAATGATAGATCTCAGAGCAGCTGAAGCGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGGTATTTACAGTGTCCATAGGGACAGGGGTCTCAGGTTTGAGTGGGACTGTGATAAGCACCGAAGAATaGCTTTTGAAAAACGAGATC | + |
|
Preference number: 3 (lower is better) Translates to: EVFTVSIGTGVSGLSGTVISTEE*LLKNEI Trigger: GATCTCGTTTTTCAAAAGCAATTCTTCGGTGCTTAT...CACAGTCCCACTCAAACCTGAGACCCCTGTCCCTATGGACACTGTAAATACCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR-3UTR CAA 90 bp | TATACTGCAAGACAGGTCACACACCAAGGATCCTTCAAACACAAACGCTCCTCCACCGAAGAATTGCTTTaGAAAAACGAGATCCATTGC | + |
|
Preference number: 3 (lower is better) Translates to: YTARQVTHQGSFKHKRSSTEELL*KNEIHC Trigger: GCAATGGATCTCGTTTTTCAAAAGCAATTCTTCGGT...GGAGGAGCGTTTGTGTTTGAAGGATCCTTGGTGTGTGACCTGTCTTGCAGTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR TCA 72 bp | TTCAGTCACCCACAGTGGTTACTTTTAAGGTTCCGTTaGACGAAAGAAAACCAGGGTACATTACAAGTCGGT | + |
|
Preference number: 3 (lower is better) Translates to: FSHPQWLLLRFR*TKENQGTLQVG Trigger: ACCGACTTGTAATGTACCCTGGTTTTCTTTCGTTCAACGGAACCTTAAAAGTAACCACTGTGGGTGACTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR TCA 72 bp | CGAGCTCTACTTCAAAATGTTACTTACATGCAGACGTaGAAAGACAAGCATCACAATAAGGGTCATCAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: RALLQNVTYMQT*KDKHHNKGHQG Trigger: CCCCTGATGACCCTTATTGTGATGCTTGTCTTTTCACGTCTGCATGTAAGTAACATTTTGAAGTAGAGCTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR GCA 72 bp | CAGAGTCACGAGCTCTACTTCAAAATGTTACTTACATaGAGACGTGAAAAGACAAGCATCACAATAAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: QSHELYFKMLLT*RREKTSITIRV Trigger: GACCCTTATTGTGATGCTTGTCTTTTCACGTCTGCATGTAAGTAACATTTTGAAGTAGAGCTCGTGACTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR GCA 72 bp | AAATATATAATAAGATGCTCTGTCCTTCAGGGAACATaGCAGAACATGCCTGTAATGACAATGACACCACTC | + |
|
Preference number: 3 (lower is better) Translates to: KYIIRCSVLQGT*QNMPVMTMTPL Trigger: GAGTGGTGTCATTGTCATTACAGGCATGTTCTGGCATGTTCCCTGAAGGACAGAGCATCTTATTATATATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR CAA 72 bp | CAGGACAGGATCTGGCCTGTTCCAGGCAAGGGCTGGTaGGTGAACAGCTTAGCCCTCTCTCCAGGAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QDRIWPVPGKGW*VNSLALSPGGR Trigger: CCTGCCTCCTGGAGAGAGGGCTAAGCTGTTCACCAACCAGCCCTTGCCTGGAACAGGCCAGATCCTGTCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| CDS-3UTR TCA 90 bp | CATAAGTGCCTTGGATCAGGGCCCTCTGGGGCTGCCCACAGTGCCCAGCAGGGATCAGGAGGGACACAATaGCGATGGATGCGTAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HKCLGSGPSGAAHSAQQGSGGTQ*RWMRSQ Trigger: TTGGCTACGCATCCATCGTCATTGTGTCCCTCCTGA...TCCCTGCTGGGCACTGTGGGCAGCCCCAGAGGGCCCTGATCCAAGGCACTTATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| CDS-3UTR CCA 90 bp | AGCCCTCTCTCCAGGAGGCAGGCGGACCAGAGTCACGAGCTCTACTTCAAAATGGCCTTCACCAGCACCTaGCAGGGTCAGTCCACGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SPLSRRQADQSHELYFKMAFTST*QGQSTD Trigger: GTCCGTGGACTGACCCTGCCAGGTGCTGGTGAAGGC...CATTTTGAAGTAGAGCTCGTGACTCTGGTCCGCCTGCCTCCTGGAGAGAGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| CDS-3UTR CCA 90 bp | TGGTCTGCGTGGCTTTCCATGGTAGGGTATGGAGCTGAGGTGAGGACTGGAGGCGGGAGTGAAAGGGTGTaGCCCCTTCACGCTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: WSAWLSMVGYGAEVRTGGGSERV*PLHAPQ Trigger: CTGTGGAGCGTGAAGGGGCCACACCCTTTCACTCCC...GCCTCCAGTCCTCACCTCAGCTCCATACCCTACCATGGAAAGCCACGCAGACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR CAA 72 bp | CGGCTGGCCTTCCAAATCCAGGCAGGGCCTGGGGACTaGGCCCGCTGTGTCTTTGGTCTAGAATTCGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLAFQIQAGPGD*ARCVFGLEFDL Trigger: CAGATCGAATTCTAGACCAAAGACACAGCGGGCCAAGTCCCCAGGCCCTGCCTGGATTTGGAAGGCCAGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR CAA 72 bp | ACTGGGCTGGCACCTGTTAGACTGGTTGCTAGAGCATaGCCCCGTCCCGAGAGGCAGGACTGGAATGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TGLAPVRLVARA*PRPERQDWNAV Trigger: GACAGCATTCCAGTCCTGCCTCTCGGGACGGGGCAATGCTCTAGCAACCAGTCTAACAGGTGCCAGCCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| CDS-3UTR TCA 90 bp | CTGAGTTCCAGCGTCGATCCACACCTGTGGGTCCCCAAGGCGGCTGATGTCAGGTCAGGAGGGACACAATaGCGATGGATGCGTAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSSSVDPHLWVPKAADVRSGGTQ*RWMRSQ Trigger: TTGGCTACGCATCCATCGTCATTGTGTCCCTCCTGA...CCTGACATCAGCCGCCTTGGGGACCCACAGGTGTGGATCGACGCTGGAACTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205663.2 |
||
| CDS-3UTR TCA 90 bp | TGGTCTGCGTGGCTTTCCATGGTAGGGTATGGAGCTGAGGTGAGGACTGGAGGCCTTTTGGGTAGGCAATaGAGGCCAAGCCAGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: WSAWLSMVGYGAEVRTGGLLGRQ*RPSQDL Trigger: CAGGTCCTGGCTTGGCCTTCATTGCCTACCCAAAAG...GCCTCCAGTCCTCACCTCAGCTCCATACCCTACCATGGAAAGCCACGCAGACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| CDS-3UTR GCA 90 bp | CGGGGTGAGCAGGGCGGTAAGGACTGGCACACGTGGGTATTGCTCTGTGTTCCATGTTCCAGCTATGGTTaGAGTGGGCCCAGGGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RGEQGGKDWHTWVLLCVPCSSYG*SGPRED Trigger: ATCTTCCCTGGGCCCACTGCAACCATAGCTGGAACA...TGGAACACAGAGCAATACCCACGTGTGCCAGTCCTTACCGCCCTGCTCACCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| CDS-3UTR TCA 90 bp | TGGCTTGTGTCTGCATCTTGGAGAGAGGAACTGGGCTGGCACCTGTTAGACTGGGGCCAAGCCAGGACCTaGCTCAGCCACATCAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: WLVSASWREELGWHLLDWGQART*LSHISN Trigger: ATTGCTGATGTGGCTGAGTCAGGTCCTGGCTTGGCC...CCAGTCTAACAGGTGCCAGCCCAGTTCCTCTCTCCAAGATGCAGACACAAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| CDS-3UTR CCA 90 bp | AGTGCCCAGCAGGGACCCTCCATTTGGGAGGTCACATCACTCTTAGGACCAAATAGGGGATACACAGCATaGAGGAAAGGGCCAGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SAQQGPSIWEVTSLLGPNRGYTA*RKGPGP Trigger: GGGGCCTGGCCCTTTCCTCCATGCTGTGTATCCCCT...ATTTGGTCCTAAGAGTGATGTGACCTCCCAAATGGAGGGTCCCTGCTGGGCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| CDS-3UTR TCA 90 bp | AGACATTCAGACGTCCCATCCCTGCCTGTAATACCCATGGTGGTTCAGCCAGTCGTTATAGCTTCCCAGTaGGGTCATGGCCCCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RHSDVPSLPVIPMVVQPVVIASQ*GHGPQA Trigger: TGCCTGGGGGCCATGACCTCACTGGGAAGCTATAAC...GACTGGCTGAACCACCATGGGTATTACAGGCAGGGATGGGACGTCTGAATGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| CDS-3UTR GCA 90 bp | CGGGGTGAGCAGGGCGGTAAGGACTGGCACACGTGGGTATTGCTCTGTGTTCCACACAATGACGATGGATaGGTAGCCAATGCCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RGEQGGKDWHTWVLLCVPHNDDG*VANARE Trigger: TTCTCTGGCATTGGCTACGCATCCATCGTCATTGTG...TGGAACACAGAGCAATACCCACGTGTGCCAGTCCTTACCGCCCTGCTCACCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| CDS-3UTR GCA 90 bp | AGTGCCCAGCAGGGACCCTCCATTTGGGAGGTCACATCACTCTTAGGACCAAATGCAGGGTGTCCTCCATaGACTGTGGTGTGTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SAQQGPSIWEVTSLLGPNAGCPP*TVVCSS Trigger: GCTGGAACACACCACAGTGCATGGAGGACACCCTGC...ATTTGGTCCTAAGAGTGATGTGACCTCCCAAATGGAGGGTCCCTGCTGGGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR CAA 72 bp | TTAAGATCCAGGGTCTACAGCCACTTGGAGCACTCCTaGCTGGGAGCTGCTGGATGGTTCTGGGGTGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: LRSRVYSHLEHS*LGAAGWFWGGN Trigger: GTTACCACCCCAGAACCATCCAGCAGCTCCCAGCAAGGAGTGCTCCAAGTGGCTGTAGACCCTGGATCTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| CDS-3UTR GCA 90 bp | AGGGTCAGTCCACGGACCAGCAGCACCAGAAGCATGGCAAACGGGAAAGTAGCGCACAATGACGATGGATaGGTAGCCAATGCCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RVSPRTSSTRSMANGKVAHNDDG*VANARE Trigger: TTCTCTGGCATTGGCTACGCATCCATCGTCATTGTG...CGCTACTTTCCCGTTTGCCATGCTTCTGGTGCTGCTGGTCCGTGGACTGACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205663.2 |
||
| CDS-3UTR CCA 90 bp | AGGAAGGGGTGTGCACACAGAGGTATTTACAGTGTCCATAGGGACAGGGGTCTCCAGCTATGGTTGCAGTaGGCCCAGGGAAGATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RKGCAHRGIYSVHRDRGLQLWLQ*AQGRSF Trigger: GAAGGATCTTCCCTGGGCCCACTGCAACCATAGCTG...GAGACCCCTGTCCCTATGGACACTGTAAATACCTCTGTGTGCACACCCCTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| CDS-3UTR CCA 90 bp | GCGAGTGCTGCTTTCTCCTCATGCGCTGCCATGGTCTGCGTGGCTTTCCATGGTTCGACTTCAACAAACTaGCTGTCCAGTCCAAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ASAAFSSCAAMVCVAFHGSTSTN*LSSPSK Trigger: CTTGCTTGGACTGGACAGCCAGTTTGTTGAAGTCGA...ACCATGGAAAGCCACGCAGACCATGGCAGCGCATGAGGAGAAAGCAGCACTCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR CAA 72 bp | AGCACTGCTCTGGCTTCCGGGATGCCCCTCTCCATCTaGGAGTATCTGGGTTTTGTTGTGTGTGTGGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: STALASGMPLSI*EYLGFVVCVVW Trigger: CCAAACCACACACACAACAAAACCCAGATACTCCAAGATGGAGAGGGGCATCCCGGAAGCCAGAGCAGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| CDS-3UTR TCA 90 bp | AGTGCCCAGCAGGGACCCTCCATTTGGGAGGTCACATCACTCTTAGGACCAAATGTCTCCACAATGACGTaGCTGGGTTTCATGAGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SAQQGPSIWEVTSLLGPNVSTMT*LGFMSA Trigger: CGCACTCATGAAACCCAGTCACGTCATTGTGGAGAC...ATTTGGTCCTAAGAGTGATGTGACCTCCCAAATGGAGGGTCCCTGCTGGGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| CDS-3UTR CCA 90 bp | AGGCAAGGAAGAATAGTGCCCTCCTGGGGTACACTTGCCAGCCTGGGGTACACTCCTTCTGATGTGTACTaGCCTATGATGACCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RQGRIVPSWGTLASLGYTPSDVY*PMMTSK Trigger: CTTGGAGGTCATCATAGGCCAGTACACATCAGAAGG...AGTGTACCCCAGGCTGGCAAGTGTACCCCAGGAGGGCACTATTCTTCCTTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| CDS-3UTR CCA 90 bp | TGGGAGGTCACATCACTCTTAGGACCAAATAACATCTCCCAGGGTCTCCTGGGCTGGGCAGCGGCATCATaGTTACAGCTTTTGGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: WEVTSLLGPNNISQGLLGWAAAS*LQLLGR Trigger: CCTACCCAAAAGCTGTAACCATGATGCCGCTGCCCA...GCCCAGGAGACCCTGGGAGATGTTATTTGGTCCTAAGAGTGATGTGACCTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR CAA 72 bp | AACTCAGATCCTTTAAGATCCAGGGTCTACAGCCACTaGGAGCACTCCTTGCTGGGAGCTGCTGGATGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: NSDPLRSRVYSH*EHSLLGAAGWF Trigger: GAACCATCCAGCAGCTCCCAGCAAGGAGTGCTCCAAGTGGCTGTAGACCCTGGATCTTAAAGGATCTGAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR CAA 72 bp | CCTCATCAGCTCTGGCCTTTGGTTGACAGGGAAGGCTaGACAGTTTACTTAGACAATGCCCTGGACCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PHQLWPLVDREG*TVYLDNALDLP Trigger: AGGCAGGTCCAGGGCATTGTCTAAGTAAACTGTCAAGCCTTCCCTGTCAACCAAAGGCCAGAGCTGATGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| CDS-3UTR GCA 90 bp | AGTGCCCAGCAGGGACCCTCCATTTGGGAGGTCACATCACTCTTAGGACCAAATGCACAAAGTCGATCTTaGTGGACCACTTCTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SAQQGPSIWEVTSLLGPNAQSRS*WTTSPS Trigger: AGAGGGAGAAGTGGTCCAGCAAGATCGACTTTGTGC...ATTTGGTCCTAAGAGTGATGTGACCTCCCAAATGGAGGGTCCCTGCTGGGCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| CDS-3UTR TCA 90 bp | CACACCAAGGATCCTTCAAACACAAACGCTCCTCCCCTTCTTGATTGGTTTCAGGAACTCGATGACGGGTaGGGTGAAGTTGGCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HTKDPSNTNAPPLLDWFQELDDG*GEVGSA Trigger: AGCACTGCCAACTTCACCTCACCCGTCATCGAGTTC...CTGAAACCAATCAAGAAGGGGAGGAGCGTTTGTGTTTGAAGGATCCTTGGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| CDS-3UTR CCA 90 bp | AGACATTCAGACGTCCCATCCCTGCCTGTAATACCCATGGTGGTTCAGCCAGTCCATGGTTACAGCTTTTaGGTAGGCAATGAAGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RHSDVPSLPVIPMVVQPVHGYSF*VGNEGQ Trigger: TTGGCCTTCATTGCCTACCCAAAAGCTGTAACCATG...GACTGGCTGAACCACCATGGGTATTACAGGCAGGGATGGGACGTCTGAATGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| CDS-3UTR TCA 90 bp | CTAGCTAAGGCTCTTCACACTAGTGATGTCTTTGGCCCTCAGTTTCCTGTGGTAGGTACAGGTAGAATTTaGTGCCTTCACCAGCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LAKALHTSDVFGPQFPVVGTGRI*CLHQHL Trigger: CAGGTGCTGGTGAAGGCATCAAATTCTACCTGTACC...TACCACAGGAAACTGAGGGCCAAAGACATCACTAGTGTGAAGAGCCTTAGCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| CDS-3UTR GCA 90 bp | AAACGAGATCCATTGCTGGCAAGACCAATTCAAGTGGCAAAGTGTATGACAGACGGTCCCATTTCAGACTaGCTGGGTTGTCGATTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KRDPLLARPIQVAKCMTDGPISD*LGCRFR Trigger: CCGGAATCGACAACCCAGGCAGTCTGAAATGGGACC...GTCTGTCATACACTTTGCCACTTGAATTGGTCTTGCCAGCAATGGATCTCGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| CDS-3UTR TCA 90 bp | GAGGTATTTACAGTGTCCATAGGGACAGGGGTCTCAGGTTTGAGTGGGACTGTGTACACAAGATGGCTATaGAGATTTCCCGACGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: EVFTVSIGTGVSGLSGTVYTRWL*RFPDDN Trigger: GTTATCGTCGGGAAATCTTCATAGCCATCTTGTGTA...CACAGTCCCACTCAAACCTGAGACCCCTGTCCCTATGGACACTGTAAATACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| 3UTR CAA 72 bp | TTTCAGTCACCCACAGTGGTTACTTTTAAGGTTCCGTaGAACGAAAGAAAACCAGGGTACATTACAAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: FQSPTVVTFKVP*NERKPGYITSR Trigger: CCGACTTGTAATGTACCCTGGTTTTCTTTCGTTCAACGGAACCTTAAAAGTAACCACTGTGGGTGACTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| CDS-3UTR CAA 90 bp | TGGTCTGCGTGGCTTTCCATGGTAGGGTATGGAGCTGAGGTGAGGACTGGAGGCACGGGTGAGGTGAAGTaGGCAGTGCTAAGGGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: WSAWLSMVGYGAEVRTGGTGEVK*AVLRET Trigger: GGTCTCCCTTAGCACTGCCAACTTCACCTCACCCGT...GCCTCCAGTCCTCACCTCAGCTCCATACCCTACCATGGAAAGCCACGCAGACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| CDS-3UTR CAA 90 bp | CTAGCTAAGGCTCTTCACACTAGTGATGTCTTTGGCCCTCAGTTTCCTGTGGTATCCACAGCCCAGCGGTaGGGCTCCCTGGGGGTTATC | + |
|
Preference number: 5 (lower is better) Translates to: LAKALHTSDVFGPQFPVVSTAQR*GSLGVI Trigger: GATAACCCCCAGGGAGCCCAACCGCTGGGCTGTGGA...TACCACAGGAAACTGAGGGCCAAAGACATCACTAGTGTGAAGAGCCTTAGCTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| CDS-3UTR CAA 90 bp | AGGAAGGGGTGTGCACACAGAGGTATTTACAGTGTCCATAGGGACAGGGGTCTCGTCAGGGGTACATACTaGACAAGCGAGAAGACGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RKGCAHRGIYSVHRDRGLVRGTY*TSEKTK Trigger: TTTCGTCTTCTCGCTTGTCAAGTATGTACCCCTGAC...GAGACCCCTGTCCCTATGGACACTGTAAATACCTCTGTGTGCACACCCCTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| CDS-3UTR CAA 90 bp | TCTGGGGTGGTAACTTTCACAAGAGTTTGTCAAGAGGCAAGGAAGAATAGTGCCAGCACAAAGTCGATCTaGCTGGACCACTTCTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SGVVTFTRVCQEARKNSASTKSI*LDHFSL Trigger: GAGGGAGAAGTGGTCCAGCAAGATCGACTTTGTGCT...GGCACTATTCTTCCTTGCCTCTTGACAAACTCTTGTGAAAGTTACCACCCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| CDS CAA 72 bp | GCCCAGCGGTTGGGCTCCCTGGGGGTTATCAGGTATTaGATTCTCACGCGGAGCGGTCCCTCCGTCCGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: AQRLGSLGVIRY*ILTRSGPSVRQ Trigger: CTGCCGGACGGAGGGACCGCTCCGCGTGAGAATCAAATACCTGATAACCCCCAGGGAGCCCAACCGCTGGGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| CDS CAA 90 bp | CGCTCCACAGCCCAGCGGTTGGGCTCCCTGGGGGTTATCAGGTATTaGATTCTCACGCGGAGCGGTCCCTCCGTCCGGCAGAGGAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: RSTAQRLGSLGVIRY*ILTRSGPSVRQRRM Trigger: CATCCTCCTCTGCCGGACGGAGGGACCGCTCCGCGTGAGAATCAAATACCTGATAACCCCCAGGGAGCCCAACCGCTGGGCTGTGGAGCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| CDS TCA 72 bp | CCCAGCGGTTGGGCTCCCTGGGGGTTATCAGGTATTTaGTTCTCACGCGGAGCGGTCCCTCCGTCCGGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: PSGWAPWGLSGI*FSRGAVPPSGR Trigger: TCTGCCGGACGGAGGGACCGCTCCGCGTGAGAATCAAATACCTGATAACCCCCAGGGAGCCCAACCGCTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| CDS TCA 72 bp | TTCATGAGTGCGCCGTTCATGAGGGTTACTCGGGAGTaGAAGGGTGTGGCCCCTTCACGCTCCACAGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: FMSAPFMRVTRE*KGVAPSRSTAQ Trigger: CTGGGCTGTGGAGCGTGAAGGGGCCACACCCTTTCACTCCCGAGTAACCCTCATGAACGGCGCACTCATGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||
| CDS CAA 72 bp | AAGGGTGTGGCCCCTTCACGCTCCACAGCCCAGCGGTaGGGCTCCCTGGGGGTTATCAGGTATTTGATTCTC | + |
|
Preference number: 6 (lower is better) Translates to: KGVAPSRSTAQR*GSLGVIRYLIL Trigger: GAGAATCAAATACCTGATAACCCCCAGGGAGCCCAACCGCTGGGCTGTGGAGCGTGAAGGGGCCACACCCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032185.9 |
||