Pregenerated sensors for SLC6A4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020838Ensembl transcript IDs: ENSMUST00000021195.11, ENSMUST00000108402.9, ENSMUST00000129572.3
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAGACGTTCACAGACCTAATCTAAACCTGAAGCTAGCTGATGACTaGGTGGCGTTCATCCCCTCCTTCCTCTCCTCACATATCCAAGTC | + |
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Preference number: 1 (lower is better) Translates to: TDVHRPNLNLKLADD*VAFIPSFLSSHIQV Trigger: GACTTGGATATGTGAGGAGAGGAAGGAGGGGATGAACGCCACCCAGTCATCAGCTAGCTTCAGGTTTAGATTAGGTCTGTGAACGTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| 3UTR CCA 90 bp | TGTAATGGGCCCGGAGTGTTGGAATTGAGGGGACACAGACAACAATaGACAGACACAAGAGCTCACACATATATATCAGTTTTCAGTGTA | + |
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Preference number: 1 (lower is better) Translates to: CNGPGVLELRGHRQQ*TDTRAHTYISVFSV Trigger: TACACTGAAAACTGATATATATGTGTGAGCTCTTGTGTCTGTCCATTGTTGTCTGTGTCCCCTCAATTCCAACACTCCGGGCCCATTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| 3UTR-3UTR CCA 90 bp | TCTTTACGTCTTCCTTTCTTAACCTCACAGCAGCACGTGGGTTACAGGGTTCTAGGGGAGGAGTCAAGGTaGGGCTTTTCAGAGATGAGG | + |
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Preference number: 2 (lower is better) Translates to: SLRLPFLTSQQHVGYRVLGEESR*GFSEMR Trigger: CCTCATCTCTGAAAAGCCCCACCTTGACTCCTCCCC...TAGAACCCTGTAACCCACGTGCTGCTGTGAGGTTAAGAAAGGAAGACGTAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| 3UTR-3UTR CCA 90 bp | TCTTCCTTTCTTAACCTCACAGCAGCACGTGGGTTACAGGGTTCTAGTAGATTCGGGGAGGAGTCAAGGTaGGGCTTTTCAGAGATGAGG | + |
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Preference number: 2 (lower is better) Translates to: SSFLNLTAARGLQGSSRFGEESR*GFSEMR Trigger: CCTCATCTCTGAAAAGCCCCACCTTGACTCCTCCCC...GAATCTACTAGAACCCTGTAACCCACGTGCTGCTGTGAGGTTAAGAAAGGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| 3UTR-3UTR CCA 90 bp | TACCCAGAACATGATACAGACGTTCACAGACCTAATCTAAACCTGAAGCTAGCTGTCCAAGAGAGTTCATaGAAAGAAGTGGTTGGAACC | + |
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Preference number: 2 (lower is better) Translates to: YPEHDTDVHRPNLNLKLAVQESS*KEVVGT Trigger: GGTTCCAACCACTTCTTTCCATGAACTCTCTTGGAC...AGCTAGCTTCAGGTTTAGATTAGGTCTGTGAACGTCTGTATCATGTTCTGGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| 3UTR-3UTR CCA 90 bp | CAACAATGGACAGACACAAGAGCTCACACATATATATCAGTTTTCAGTGTAGCGAGGACTGTGACTCCATaGAGAAAGACCTTACATCAT | + |
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Preference number: 2 (lower is better) Translates to: QQWTDTRAHTYISVFSVARTVTP*RKTLHH Trigger: ATGATGTAAGGTCTTTCTCCATGGAGTCACAGTCCT...CGCTACACTGAAAACTGATATATATGTGTGAGCTCTTGTGTCTGTCCATTGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| 3UTR-3UTR CCA 90 bp | ATGCTACTGAGAAAATATATATGGCTAGCAAGACATCCCTGTTTTCTCTTAGGTAGGACTGTGACTCCATaGAGAAAGACCTTACATCAT | + |
|
Preference number: 2 (lower is better) Translates to: MLLRKYIWLARHPCFLLGRTVTP*RKTLHH Trigger: ATGATGTAAGGTCTTTCTCCATGGAGTCACAGTCCT...ACCTAAGAGAAAACAGGGATGTCTTGCTAGCCATATATATTTTCTCAGTAGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| 3UTR CCA 72 bp | CACAGACCTAATCTAAACCTGAAGCTAGCTGATGACTaGGTGGCGTTCATCCCCTCCTTCCTCTCCTCACAT | + |
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Preference number: 3 (lower is better) Translates to: HRPNLNLKLADD*VAFIPSFLSSH Trigger: ATGTGAGGAGAGGAAGGAGGGGATGAACGCCACCCAGTCATCAGCTAGCTTCAGGTTTAGATTAGGTCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| 3UTR-3UTR CAA 90 bp | GTTCACAGACCTAATCTAAACCTGAAGCTAGCTGATGACTGGGTGGCGTTCATCCATGGAAAGAAGTGGTaGGAACCCACAAGAGTCTGG | + |
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Preference number: 3 (lower is better) Translates to: VHRPNLNLKLADDWVAFIHGKKW*EPTRVW Trigger: CCAGACTCTTGTGGGTTCCAACCACTTCTTTCCATG...GATGAACGCCACCCAGTCATCAGCTAGCTTCAGGTTTAGATTAGGTCTGTGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| 3UTR CCA 72 bp | CCCGGAGTGTTGGAATTGAGGGGACACAGACAACAATaGACAGACACAAGAGCTCACACATATATATCAGTT | + |
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Preference number: 3 (lower is better) Translates to: PGVLELRGHRQQ*TDTRAHTYISV Trigger: AACTGATATATATGTGTGAGCTCTTGTGTCTGTCCATTGTTGTCTGTGTCCCCTCAATTCCAACACTCCGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| 3UTR-3UTR CAA 90 bp | CTACAGAGTTCTATGCTACTGAGAAAATATATATGGCTAGCAAGACATCCCTGTCATGGAAAGAAGTGGTaGGAACCCACAAGAGTCTGG | + |
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Preference number: 3 (lower is better) Translates to: LQSSMLLRKYIWLARHPCHGKKW*EPTRVW Trigger: CCAGACTCTTGTGGGTTCCAACCACTTCTTTCCATG...ACAGGGATGTCTTGCTAGCCATATATATTTTCTCAGTAGCATAGAACTCTGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| 3UTR TCA 72 bp | CTGAAGGCTTTAGAAGCAAACAGATGCAGGGCAATATaGTCATACCCAGAACATGATACAGACGTTCACAGA | + |
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Preference number: 3 (lower is better) Translates to: LKALEANRCRAI*SYPEHDTDVHR Trigger: TCTGTGAACGTCTGTATCATGTTCTGGGTATGATCATATTGCCCTGCATCTGTTTGCTTCTAAAGCCTTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR GCA 90 bp | TCCTCTCCTCACATATCCAAGTCAGCTCAGCCGTGTCACCAGCTAATGTGGCAGAGCCACGGTGAGCACTaGTGGCCCCGTGGCGTACTC | + |
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Preference number: 4 (lower is better) Translates to: SSPHISKSAQPCHQLMWQSHGEH*WPRGVL Trigger: GAGTACGCCACGGGGCCAGCAGTGCTCACCGTGGCT...CTGCCACATTAGCTGGTGACACGGCTGAGCTGACTTGGATATGTGAGGAGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR CCA 90 bp | CCTTTCTTAACCTCACAGCAGCACGTGGGTTACAGGGTTCTAGTAGATTCCGGCGGTGGTGGTGGCAGCTaGCGTAGAGTGTGGCGCTTC | + |
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Preference number: 4 (lower is better) Translates to: PFLTSQQHVGYRVLVDSGGGGGS*RRVWRF Trigger: GAAGCGCCACACTCTACGCCAGCTGCCACCACCACC...GCCGGAATCTACTAGAACCCTGTAACCCACGTGCTGCTGTGAGGTTAAGAAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR CCA 90 bp | ACGTCTTCCTTTCTTAACCTCACAGCAGCACGTGGGTTACAGGGTTCTAGTAGAGCACTGCTGGCCCCGTaGCGTACTCCTCCAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: TSSFLNLTAARGLQGSSRALLAP*RTPPAG Trigger: CCCTGCTGGAGGAGTACGCCACGGGGCCAGCAGTGC...TCTACTAGAACCCTGTAACCCACGTGCTGCTGTGAGGTTAAGAAAGGAAGACGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR TCA 90 bp | AGTGTAGCGTCTTTACGTCTTCCTTTCTTAACCTCACAGCAGCACGTGGGTTACGAGCCAGCTGCCAGCTaGTGGTCCCCAGGTCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: SVASLRLPFLTSQQHVGYEPAAS*WSPGPG Trigger: TCCAGGACCTGGGGACCATCAGCTGGCAGCTGGCTC...GTAACCCACGTGCTGCTGTGAGGTTAAGAAAGGAAGACGTAAAGACGCTACACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR GCA 90 bp | CCTAATCTAAACCTGAAGCTAGCTGATGACTGGGTGGCGTTCATCCCCTCCTTCAGGCCCTGCCTTGTCTaGTGGTGTGGGGACACCCTT | + |
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Preference number: 4 (lower is better) Translates to: PNLNLKLADDWVAFIPSFRPCLV*WCGDTL Trigger: AAGGGTGTCCCCACACCAGCAGACAAGGCAGGGCCT...GAAGGAGGGGATGAACGCCACCCAGTCATCAGCTAGCTTCAGGTTTAGATTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR GCA 90 bp | CAGTGTAGCGTCTTTACGTCTTCCTTTCTTAACCTCACAGCAGCACGTGGGTTAAGCCACGGTGAGCACTaGTGGCCCCGTGGCGTACTC | + |
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Preference number: 4 (lower is better) Translates to: QCSVFTSSFLNLTAARGLSHGEH*WPRGVL Trigger: GAGTACGCCACGGGGCCAGCAGTGCTCACCGTGGCT...TAACCCACGTGCTGCTGTGAGGTTAAGAAAGGAAGACGTAAAGACGCTACACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR CCA 90 bp | CCTTTCTTAACCTCACAGCAGCACGTGGGTTACAGGGTTCTAGTAGATTCCGGCATGCACCCATTTCGGTaGTACTGGCCCAGGGCGAGC | + |
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Preference number: 4 (lower is better) Translates to: PFLTSQQHVGYRVLVDSGMHPFR*YWPRAS Trigger: GCTCGCCCTGGGCCAGTACCACCGAAATGGGTGCAT...GCCGGAATCTACTAGAACCCTGTAACCCACGTGCTGCTGTGAGGTTAAGAAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR CCA 90 bp | GAGAGTTCATGGAAAGAAGTGGTTGGAACCCACAAGAGTCTGGGCACCATAGTCCCCTGCCTTGTCTGCTaGTGTGGGGACACCCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: ESSWKEVVGTHKSLGTIVPCLVC*CGDTLL Trigger: CAGAAGGGTGTCCCCACACCAGCAGACAAGGCAGGG...GACTATGGTGCCCAGACTCTTGTGGGTTCCAACCACTTCTTTCCATGAACTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR CCA 90 bp | TCCTCTCCTCACATATCCAAGTCAGCTCAGCCGTGTCACCAGCTAATGTGGCAGCCTGGGCGAAGTAGTTaGTGCAGTTGCCAGTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: SSPHISKSAQPCHQLMWQPGRSS*CSCQCS Trigger: GGAACACTGGCAACTGCACCAACTACTTCGCCCAGG...CTGCCACATTAGCTGGTGACACGGCTGAGCTGACTTGGATATGTGAGGAGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR GCA 90 bp | ACGTCTTCCTTTCTTAACCTCACAGCAGCACGTGGGTTACAGGGTTCTAGTAGAAGGCCCTGCCTTGTCTaGTGGTGTGGGGACACCCTT | + |
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Preference number: 4 (lower is better) Translates to: TSSFLNLTAARGLQGSSRRPCLV*WCGDTL Trigger: AAGGGTGTCCCCACACCAGCAGACAAGGCAGGGCCT...TCTACTAGAACCCTGTAACCCACGTGCTGCTGTGAGGTTAAGAAAGGAAGACGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR CCA 90 bp | TCTTCCTTTCTTAACCTCACAGCAGCACGTGGGTTACAGGGTTCTAGTAGATTCGGTGGTGGTGGCAGCTaGCGTAGAGTGTGGCGCTTC | + |
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Preference number: 4 (lower is better) Translates to: SSFLNLTAARGLQGSSRFGGGGS*RRVWRF Trigger: GAAGCGCCACACTCTACGCCAGCTGCCACCACCACC...GAATCTACTAGAACCCTGTAACCCACGTGCTGCTGTGAGGTTAAGAAAGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR CCA 90 bp | CAGTGTAGCGTCTTTACGTCTTCCTTTCTTAACCTCACAGCAGCACGTGGGTTACCATTTCGGTGGTACTaGCCCAGGGCGAGCTCCATG | + |
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Preference number: 4 (lower is better) Translates to: QCSVFTSSFLNLTAARGLPFRWY*PRASSM Trigger: CATGGAGCTCGCCCTGGGCCAGTACCACCGAAATGG...TAACCCACGTGCTGCTGTGAGGTTAAGAAAGGAAGACGTAAAGACGCTACACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR CCA 90 bp | TCCTCTCCTCACATATCCAAGTCAGCTCAGCCGTGTCACCAGCTAATGTGGCAGTGCAGTTCACCACACTaGTCACCAGGGCATCTTGGT | + |
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Preference number: 4 (lower is better) Translates to: SSPHISKSAQPCHQLMWQCSSPH*SPGHLG Trigger: ACCAAGATGCCCTGGTGACCAGTGTGGTGAACTGCA...CTGCCACATTAGCTGGTGACACGGCTGAGCTGACTTGGATATGTGAGGAGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR TCA 90 bp | TCTTTACGTCTTCCTTTCTTAACCTCACAGCAGCACGTGGGTTACAGGGTTCTATCCCGTTCCCCTTGGTaGATCTCAGCCACCAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: SLRLPFLTSQQHVGYRVLSRSPW*ISATRV Trigger: CACCCTGGTGGCTGAGATTCACCAAGGGGAACGGGA...TAGAACCCTGTAACCCACGTGCTGCTGTGAGGTTAAGAAAGGAAGACGTAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR TCA 90 bp | TACCCAGAACATGATACAGACGTTCACAGACCTAATCTAAACCTGAAGCTAGCTGAGCCAGCTGCCAGCTaGTGGTCCCCAGGTCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: YPEHDTDVHRPNLNLKLAEPAAS*WSPGPG Trigger: TCCAGGACCTGGGGACCATCAGCTGGCAGCTGGCTC...AGCTAGCTTCAGGTTTAGATTAGGTCTGTGAACGTCTGTATCATGTTCTGGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR GCA 90 bp | CCTTTCTTAACCTCACAGCAGCACGTGGGTTACAGGGTTCTAGTAGATTCCGGCGGGCGAAGTAGTTGGTaGAGTTGCCAGTGTTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: PFLTSQQHVGYRVLVDSGGRSSW*SCQCSK Trigger: CTTGGAACACTGGCAACTGCACCAACTACTTCGCCC...GCCGGAATCTACTAGAACCCTGTAACCCACGTGCTGCTGTGAGGTTAAGAAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR GCA 90 bp | TCTTCCTTTCTTAACCTCACAGCAGCACGTGGGTTACAGGGTTCTAGTAGATTCATGCAGAGAGCCAGCTaGCAGCTGATGGTCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SSFLNLTAARGLQGSSRFMQRAS*QLMVPR Trigger: CCTGGGGACCATCAGCTGGCAGCTGGCTCTCTGCAT...GAATCTACTAGAACCCTGTAACCCACGTGCTGCTGTGAGGTTAAGAAAGGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR GCA 90 bp | GAGAGTTCATGGAAAGAAGTGGTTGGAACCCACAAGAGTCTGGGCACCATAGTCGCACAAACCATTCCCTaGGCTTGGCCCAGATGTGAG | + |
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Preference number: 4 (lower is better) Translates to: ESSWKEVVGTHKSLGTIVAQTIP*AWPRCE Trigger: CTCACATCTGGGCCAAGCGCAGGGAATGGTTTGTGC...GACTATGGTGCCCAGACTCTTGTGGGTTCCAACCACTTCTTTCCATGAACTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR CCA 90 bp | GTGGTTTATGTATTCATGAACACTGAAGGCTTTAGAAGCAAACAGATGCAGGGCCACGGTGAGCACTGCTaGCCCCGTGGCGTACTCCTC | + |
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Preference number: 4 (lower is better) Translates to: VVYVFMNTEGFRSKQMQGHGEHC*PRGVLL Trigger: GAGGAGTACGCCACGGGGCCAGCAGTGCTCACCGTG...GCCCTGCATCTGTTTGCTTCTAAAGCCTTCAGTGTTCATGAATACATAAACCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR TCA 90 bp | TCCTTTCTTAACCTCACAGCAGCACGTGGGTTACAGGGTTCTAGTAGATTCCGGCCACGGCATAGCCAATaGCAGACAGGAGGAAATCCA | + |
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Preference number: 4 (lower is better) Translates to: SFLNLTAARGLQGSSRFRPRHSQ*QTGGNP Trigger: TGGATTTCCTCCTGTCTGTCATTGGCTATGCCGTGG...CCGGAATCTACTAGAACCCTGTAACCCACGTGCTGCTGTGAGGTTAAGAAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR TCA 90 bp | AGTGTAGCGTCTTTACGTCTTCCTTTCTTAACCTCACAGCAGCACGTGGGTTACCCCCAAAGATGGCCATaGTGGTGTAAGGGAGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: SVASLRLPFLTSQQHVGYPQRWP*WCKGGG Trigger: TCCTCCTCCCTTACACCATCATGGCCATCTTTGGGG...GTAACCCACGTGCTGCTGTGAGGTTAAGAAAGGAAGACGTAAAGACGCTACACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR TCA 90 bp | TCCTTTCTTAACCTCACAGCAGCACGTGGGTTACAGGGTTCTAGTAGATTCCGGTGGAGTCCCTTTGACTaGTGGATCTGCAGGACATGG | + |
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Preference number: 4 (lower is better) Translates to: SFLNLTAARGLQGSSRFRWSPFD*WICRTW Trigger: CCATGTCCTGCAGATCCATCAGTCAAAGGGACTCCA...CCGGAATCTACTAGAACCCTGTAACCCACGTGCTGCTGTGAGGTTAAGAAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR TCA 90 bp | CCTTTCTTAACCTCACAGCAGCACGTGGGTTACAGGGTTCTAGTAGATTCCGGCAGAGAGAAAAAGATCTaGGCCGCAGCATCAACCCAC | + |
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Preference number: 4 (lower is better) Translates to: PFLTSQQHVGYRVLVDSGREKKI*AAASTH Trigger: GTGGGTTGATGCTGCGGCTCAGATCTTTTTCTCTCT...GCCGGAATCTACTAGAACCCTGTAACCCACGTGCTGCTGTGAGGTTAAGAAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR TCA 90 bp | ACGTCTTCCTTTCTTAACCTCACAGCAGCACGTGGGTTACAGGGTTCTAGTAGACATCCAACACAGCTGTaGTCACACCTTCCAGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: TSSFLNLTAARGLQGSSRHPTQL*SHLPGL Trigger: CAGGCCTGGAAGGTGTGATCACAGCTGTGTTGGATG...TCTACTAGAACCCTGTAACCCACGTGCTGCTGTGAGGTTAAGAAAGGAAGACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR CCA 90 bp | TCAGTTTTCAGTGTAGCGTCTTTACGTCTTCCTTTCTTAACCTCACAGCAGCACCCCTGCCTTGTCTGCTaGTGTGGGGACACCCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: SVFSVASLRLPFLTSQQHPCLVC*CGDTLL Trigger: CAGAAGGGTGTCCCCACACCAGCAGACAAGGCAGGG...GTGCTGCTGTGAGGTTAAGAAAGGAAGACGTAAAGACGCTACACTGAAAACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR CCA 90 bp | CCTAATCTAAACCTGAAGCTAGCTGATGACTGGGTGGCGTTCATCCCCTCCTTCCTCCTTAAGTGTCCCTaGAGTGCTGATCAGCCGATA | + |
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Preference number: 4 (lower is better) Translates to: PNLNLKLADDWVAFIPSFLLKCP*SADQPI Trigger: TATCGGCTGATCAGCACTCCAGGGACACTTAAGGAG...GAAGGAGGGGATGAACGCCACCCAGTCATCAGCTAGCTTCAGGTTTAGATTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR TCA 90 bp | TACCCAGAACATGATACAGACGTTCACAGACCTAATCTAAACCTGAAGCTAGCTTCCCGTTCCCCTTGGTaGATCTCAGCCACCAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: YPEHDTDVHRPNLNLKLASRSPW*ISATRV Trigger: CACCCTGGTGGCTGAGATTCACCAAGGGGAACGGGA...AGCTAGCTTCAGGTTTAGATTAGGTCTGTGAACGTCTGTATCATGTTCTGGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR TCA 90 bp | GTTCACAGACCTAATCTAAACCTGAAGCTAGCTGATGACTGGGTGGCGTTCATCCGCTTGGCCCAGATGTaGGGAAACTCATCCAACACA | + |
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Preference number: 4 (lower is better) Translates to: VHRPNLNLKLADDWVAFIRLAQM*GNSSNT Trigger: TGTGTTGGATGAGTTTCCTCACATCTGGGCCAAGCG...GATGAACGCCACCCAGTCATCAGCTAGCTTCAGGTTTAGATTAGGTCTGTGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR GCA 90 bp | CCTTTCTTAACCTCACAGCAGCACGTGGGTTACAGGGTTCTAGTAGATTCCGGCGCTTGTACTGGGAACTaGGGAGTACCCATTGGATAT | + |
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Preference number: 4 (lower is better) Translates to: PFLTSQQHVGYRVLVDSGACTGN*GVPIGY Trigger: ATATCCAATGGGTACTCCGCAGTTCCCAGTACAAGC...GCCGGAATCTACTAGAACCCTGTAACCCACGTGCTGCTGTGAGGTTAAGAAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR CCA 90 bp | ACGTCTTCCTTTCTTAACCTCACAGCAGCACGTGGGTTACAGGGTTCTAGTAGATGCAGTTCACCACACTaGTCACCAGGGCATCTTGGT | + |
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Preference number: 4 (lower is better) Translates to: TSSFLNLTAARGLQGSSRCSSPH*SPGHLG Trigger: ACCAAGATGCCCTGGTGACCAGTGTGGTGAACTGCA...TCTACTAGAACCCTGTAACCCACGTGCTGCTGTGAGGTTAAGAAAGGAAGACGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR TCA 90 bp | CCTTTCTTAACCTCACAGCAGCACGTGGGTTACAGGGTTCTAGTAGATTCCGGCTCTGACAGCACTTTCTaGGAATTCAAAGGTGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: PFLTSQQHVGYRVLVDSGSDSTF*EFKGVV Trigger: GACCACACCTTTGAATTCTCAGAAAGTGCTGTCAGA...GCCGGAATCTACTAGAACCCTGTAACCCACGTGCTGCTGTGAGGTTAAGAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR GCA 90 bp | CAGTGTAGCGTCTTTACGTCTTCCTTTCTTAACCTCACAGCAGCACGTGGGTTAGTGGGGACACCCTTCTaGAGAACACCATTTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QCSVFTSSFLNLTAARGLVGTPF*RTPFSW Trigger: CCAAGAAAATGGTGTTCTGCAGAAGGGTGTCCCCAC...TAACCCACGTGCTGCTGTGAGGTTAAGAAAGGAAGACGTAAAGACGCTACACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
||
| CDS-3UTR GCA 90 bp | CCTAATCTAAACCTGAAGCTAGCTGATGACTGGGTGGCGTTCATCCCCTCCTTCAGTAGTTGGTGCAGTTaGCAGTGTTCCAAGAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PNLNLKLADDWVAFIPSFSSWCS*QCSKSS Trigger: AGAACTCTTGGAACACTGGCAACTGCACCAACTACT...GAAGGAGGGGATGAACGCCACCCAGTCATCAGCTAGCTTCAGGTTTAGATTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
||
| CDS-3UTR GCA 90 bp | AGTGTAGCGTCTTTACGTCTTCCTTTCTTAACCTCACAGCAGCACGTGGGTTACAGACGAAGCTCGTCATaGAGTTCACCACACTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SVASLRLPFLTSQQHVGYRRSSS*SSPHWS Trigger: TGACCAGTGTGGTGAACTGCATGACGAGCTTCGTCT...GTAACCCACGTGCTGCTGTGAGGTTAAGAAAGGAAGACGTAAAGACGCTACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
||
| CDS-3UTR CCA 90 bp | GCTACTGAGAAAATATATATGGCTAGCAAGACATCCCTGTTTTCTCTTAGGTGGATGCACCCATTTCGGTaGTACTGGCCCAGGGCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ATEKIYMASKTSLFSLRWMHPFR*YWPRAS Trigger: GCTCGCCCTGGGCCAGTACCACCGAAATGGGTGCAT...CCACCTAAGAGAAAACAGGGATGTCTTGCTAGCCATATATATTTTCTCAGTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
||
| CDS-3UTR TCA 90 bp | TACCCAGAACATGATACAGACGTTCACAGACCTAATCTAAACCTGAAGCTAGCTCATCCAACACAGCTGTaGTCACACCTTCCAGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: YPEHDTDVHRPNLNLKLAHPTQL*SHLPGL Trigger: CAGGCCTGGAAGGTGTGATCACAGCTGTGTTGGATG...AGCTAGCTTCAGGTTTAGATTAGGTCTGTGAACGTCTGTATCATGTTCTGGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
||
| CDS-3UTR TCA 90 bp | TCAGTTTTCAGTGTAGCGTCTTTACGTCTTCCTTTCTTAACCTCACAGCAGCACCGCTTGGCCCAGATGTaGGGAAACTCATCCAACACA | + |
|
Preference number: 4 (lower is better) Translates to: SVFSVASLRLPFLTSQQHRLAQM*GNSSNT Trigger: TGTGTTGGATGAGTTTCCTCACATCTGGGCCAAGCG...GTGCTGCTGTGAGGTTAAGAAAGGAAGACGTAAAGACGCTACACTGAAAACTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR GCA 90 bp | CTACAGAGTTCTATGCTACTGAGAAAATATATATGGCTAGCAAGACATCCCTGTATGCAGAGAGCCAGCTaGCAGCTGATGGTCCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LQSSMLLRKYIWLARHPCMQRAS*QLMVPR Trigger: CCTGGGGACCATCAGCTGGCAGCTGGCTCTCTGCAT...ACAGGGATGTCTTGCTAGCCATATATATTTTCTCAGTAGCATAGAACTCTGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
||
| CDS-3UTR GCA 90 bp | GTGGTTTATGTATTCATGAACACTGAAGGCTTTAGAAGCAAACAGATGCAGGGCGCACAAACCATTCCCTaGGCTTGGCCCAGATGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VVYVFMNTEGFRSKQMQGAQTIP*AWPRCE Trigger: CTCACATCTGGGCCAAGCGCAGGGAATGGTTTGTGC...GCCCTGCATCTGTTTGCTTCTAAAGCCTTCAGTGTTCATGAATACATAAACCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
||
| CDS-3UTR GCA 90 bp | ACGTCTTCCTTTCTTAACCTCACAGCAGCACGTGGGTTACAGGGTTCTAGTAGAAGTAGTTGGTGCAGTTaGCAGTGTTCCAAGAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TSSFLNLTAARGLQGSSRSSWCS*QCSKSS Trigger: AGAACTCTTGGAACACTGGCAACTGCACCAACTACT...TCTACTAGAACCCTGTAACCCACGTGCTGCTGTGAGGTTAAGAAAGGAAGACGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
||
| CDS-3UTR GCA 90 bp | TCAGTTTTCAGTGTAGCGTCTTTACGTCTTCCTTTCTTAACCTCACAGCAGCACAGACGAAGCTCGTCATaGAGTTCACCACACTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SVFSVASLRLPFLTSQQHRRSSS*SSPHWS Trigger: TGACCAGTGTGGTGAACTGCATGACGAGCTTCGTCT...GTGCTGCTGTGAGGTTAAGAAAGGAAGACGTAAAGACGCTACACTGAAAACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
||
| CDS-3UTR CCA 90 bp | ATGCTACTGAGAAAATATATATGGCTAGCAAGACATCCCTGTTTTCTCTTAGGTCCATTTCGGTGGTACTaGCCCAGGGCGAGCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: MLLRKYIWLARHPCFLLGPFRWY*PRASSM Trigger: CATGGAGCTCGCCCTGGGCCAGTACCACCGAAATGG...ACCTAAGAGAAAACAGGGATGTCTTGCTAGCCATATATATTTTCTCAGTAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
||
| CDS-3UTR CCA 90 bp | GTGGTTTATGTATTCATGAACACTGAAGGCTTTAGAAGCAAACAGATGCAGGGCGCAGGTGACGTGGAATaGAGTGTCCAGGTGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VVYVFMNTEGFRSKQMQGAGDVE*SVQVML Trigger: CAACATCACCTGGACACTCCATTCCACGTCACCTGC...GCCCTGCATCTGTTTGCTTCTAAAGCCTTCAGTGTTCATGAATACATAAACCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
||
| CDS-3UTR TCA 90 bp | AGTAGATTCCGGCTACAGAGTTCTATGCTACTGAGAAAATATATATGGCTAGCACCCCAAAGATGGCCATaGTGGTGTAAGGGAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRFRLQSSMLLRKYIWLAPQRWP*WCKGGG Trigger: TCCTCCTCCCTTACACCATCATGGCCATCTTTGGGG...TGCTAGCCATATATATTTTCTCAGTAGCATAGAACTCTGTAGCCGGAATCTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
||
| CDS-3UTR TCA 90 bp | AGTGTAGCGTCTTTACGTCTTCCTTTCTTAACCTCACAGCAGCACGTGGGTTACCGATATAAAAGGCAATaGTGCAGATGGCATAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SVASLRLPFLTSQQHVGYRYKRQ*CRWHSQ Trigger: TTGGCTATGCCATCTGCATCATTGCCTTTTATATCG...GTAACCCACGTGCTGCTGTGAGGTTAAGAAAGGAAGACGTAAAGACGCTACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
||
| CDS-3UTR GCA 90 bp | CAACAATGGACAGACACAAGAGCTCACACATATATATCAGTTTTCAGTGTAGCGGGGCGAAGTAGTTGGTaGAGTTGCCAGTGTTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QQWTDTRAHTYISVFSVAGRSSW*SCQCSK Trigger: CTTGGAACACTGGCAACTGCACCAACTACTTCGCCC...CGCTACACTGAAAACTGATATATATGTGTGAGCTCTTGTGTCTGTCCATTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR CCA 90 bp | CAACAATGGACAGACACAAGAGCTCACACATATATATCAGTTTTCAGTGTAGCGCTGCGGAGTACCCATTaGATATTTGTCCAGGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QQWTDTRAHTYISVFSVALRSTH*IFVQAL Trigger: CAGGGCCTGGACAAATATCCAATGGGTACTCCGCAG...CGCTACACTGAAAACTGATATATATGTGTGAGCTCTTGTGTCTGTCCATTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
||
| CDS-3UTR TCA 90 bp | GACACAAGAGCTCACACATATATATCAGTTTTCAGTGTAGCGTCTTTACGTCTTAGAGCGCCCAGGCTATaGTGGTGTTATAGTAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DTRAHTYISVFSVASLRLRAPRL*WCYSRR Trigger: CCTCCTACTATAACACCATCATAGCCTGGGCGCTCT...AAGACGTAAAGACGCTACACTGAAAACTGATATATATGTGTGAGCTCTTGTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
||
| CDS-3UTR TCA 90 bp | AGTAGATTCCGGCTACAGAGTTCTATGCTACTGAGAAAATATATATGGCTAGCATGGAGTCCCTTTGACTaGTGGATCTGCAGGACATGG | + |
|
Preference number: 4 (lower is better) Translates to: SRFRLQSSMLLRKYIWLAWSPFD*WICRTW Trigger: CCATGTCCTGCAGATCCATCAGTCAAAGGGACTCCA...TGCTAGCCATATATATTTTCTCAGTAGCATAGAACTCTGTAGCCGGAATCTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
||
| CDS-3UTR TCA 90 bp | CAACAATGGACAGACACAAGAGCTCACACATATATATCAGTTTTCAGTGTAGCGAGAGAGAAAAAGATCTaGGCCGCAGCATCAACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QQWTDTRAHTYISVFSVAREKKI*AAASTH Trigger: GTGGGTTGATGCTGCGGCTCAGATCTTTTTCTCTCT...CGCTACACTGAAAACTGATATATATGTGTGAGCTCTTGTGTCTGTCCATTGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
||
| CDS-3UTR TCA 90 bp | ATGCTACTGAGAAAATATATATGGCTAGCAAGACATCCCTGTTTTCTCTTAGGTCTCCTGATGTCAGTGTaGGCAGGGATCCCAAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: MLLRKYIWLARHPCFLLGLLMSV*AGIPRC Trigger: GCATCTTGGGATCCCTGCTCACACTGACATCAGGAG...ACCTAAGAGAAAACAGGGATGTCTTGCTAGCCATATATATTTTCTCAGTAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR CCA 90 bp | AGTAGATTCCGGCTACAGAGTTCTATGCTACTGAGAAAATATATATGGCTAGCAGCAGGTGACGTGGAATaGAGTGTCCAGGTGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SRFRLQSSMLLRKYIWLAAGDVE*SVQVML Trigger: CAACATCACCTGGACACTCCATTCCACGTCACCTGC...TGCTAGCCATATATATTTTCTCAGTAGCATAGAACTCTGTAGCCGGAATCTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR TCA 90 bp | TCAGTTTTCAGTGTAGCGTCTTTACGTCTTCCTTTCTTAACCTCACAGCAGCACCGATATAAAAGGCAATaGTGCAGATGGCATAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SVFSVASLRLPFLTSQQHRYKRQ*CRWHSQ Trigger: TTGGCTATGCCATCTGCATCATTGCCTTTTATATCG...GTGCTGCTGTGAGGTTAAGAAAGGAAGACGTAAAGACGCTACACTGAAAACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR TCA 90 bp | ATGCTACTGAGAAAATATATATGGCTAGCAAGACATCCCTGTTTTCTCTTAGGTAGAGCGCCCAGGCTATaGTGGTGTTATAGTAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: MLLRKYIWLARHPCFLLGRAPRL*WCYSRR Trigger: CCTCCTACTATAACACCATCATAGCCTGGGCGCTCT...ACCTAAGAGAAAACAGGGATGTCTTGCTAGCCATATATATTTTCTCAGTAGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR CCA 90 bp | CAGTGTAGCGTCTTTACGTCTTCCTTTCTTAACCTCACAGCAGCACGTGGGTTAAGAGTTTCTGCCAGTTaGGTTTCAAGTAAAAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: QCSVFTSSFLNLTAARGLRVSAS*VSSKRQ Trigger: TTGTCTTTTACTTGAAACCCAACTGGCAGAAACTCT...TAACCCACGTGCTGCTGTGAGGTTAAGAAAGGAAGACGTAAAGACGCTACACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR CCA 90 bp | TCAGTTTTCAGTGTAGCGTCTTTACGTCTTCCTTTCTTAACCTCACAGCAGCACAAAGAATGTGGATGCTaGCATGTTAGCTATTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SVFSVASLRLPFLTSQQHKECGC*HVSYCL Trigger: GAGGCAATAGCTAACATGCCAGCATCCACATTCTTT...GTGCTGCTGTGAGGTTAAGAAAGGAAGACGTAAAGACGCTACACTGAAAACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR CCA 90 bp | AGTAGATTCCGGCTACAGAGTTCTATGCTACTGAGAAAATATATATGGCTAGCACTCCTTAAGTGTCCCTaGAGTGCTGATCAGCCGATA | + |
|
Preference number: 4 (lower is better) Translates to: SRFRLQSSMLLRKYIWLALLKCP*SADQPI Trigger: TATCGGCTGATCAGCACTCCAGGGACACTTAAGGAG...TGCTAGCCATATATATTTTCTCAGTAGCATAGAACTCTGTAGCCGGAATCTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| 3UTR CAA 72 bp | ATTTATATAGTTTGTAATGGGCCCGGAGTGTTGGAATaGAGGGGACACAGACAACAATGGACAGACACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: IYIVCNGPGVLE*RGHRQQWTDTR Trigger: TCTTGTGTCTGTCCATTGTTGTCTGTGTCCCCTCAATTCCAACACTCCGGGCCCATTACAAACTATATAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR CCA 90 bp | TCAGTTTTCAGTGTAGCGTCTTTACGTCTTCCTTTCTTAACCTCACAGCAGCACAGAACACCATTTTCTTaGCAGTCCTCTTTGTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SVFSVASLRLPFLTSQQHRTPFS*QSSLSL Trigger: TAAGGACAAAGAGGACTGCCAAGAAAATGGTGTTCT...GTGCTGCTGTGAGGTTAAGAAAGGAAGACGTAAAGACGCTACACTGAAAACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR GCA 90 bp | ATGCTACTGAGAAAATATATATGGCTAGCAAGACATCCCTGTTTTCTCTTAGGTGCTTGTACTGGGAACTaGGGAGTACCCATTGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: MLLRKYIWLARHPCFLLGACTGN*GVPIGY Trigger: ATATCCAATGGGTACTCCGCAGTTCCCAGTACAAGC...ACCTAAGAGAAAACAGGGATGTCTTGCTAGCCATATATATTTTCTCAGTAGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR TCA 90 bp | ATGCTACTGAGAAAATATATATGGCTAGCAAGACATCCCTGTTTTCTCTTAGGTTCTGACAGCACTTTCTaGGAATTCAAAGGTGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: MLLRKYIWLARHPCFLLGSDSTF*EFKGVV Trigger: GACCACACCTTTGAATTCTCAGAAAGTGCTGTCAGA...ACCTAAGAGAAAACAGGGATGTCTTGCTAGCCATATATATTTTCTCAGTAGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR CCA 90 bp | TCATACCCAGAACATGATACAGACGTTCACAGACCTAATCTAAACCTGAAGCTAAGAACACCATTTTCTTaGCAGTCCTCTTTGTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SYPEHDTDVHRPNLNLKLRTPFS*QSSLSL Trigger: TAAGGACAAAGAGGACTGCCAAGAAAATGGTGTTCT...TAGCTTCAGGTTTAGATTAGGTCTGTGAACGTCTGTATCATGTTCTGGGTATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
||
| CDS-3UTR CCA 90 bp | AGTAGATTCCGGCTACAGAGTTCTATGCTACTGAGAAAATATATATGGCTAGCAAAAGAATGTGGATGCTaGCATGTTAGCTATTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRFRLQSSMLLRKYIWLAKECGC*HVSYCL Trigger: GAGGCAATAGCTAACATGCCAGCATCCACATTCTTT...TGCTAGCCATATATATTTTCTCAGTAGCATAGAACTCTGTAGCCGGAATCTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
||
| CDS-3UTR CCA 90 bp | CAACAATGGACAGACACAAGAGCTCACACATATATATCAGTTTTCAGTGTAGCGAGAGTTTCTGCCAGTTaGGTTTCAAGTAAAAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: QQWTDTRAHTYISVFSVARVSAS*VSSKRQ Trigger: TTGTCTTTTACTTGAAACCCAACTGGCAGAAACTCT...CGCTACACTGAAAACTGATATATATGTGTGAGCTCTTGTGTCTGTCCATTGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS CCA 90 bp | CCAAGACACGACGACGGCCTCGATGAGAGCCACGGTGAGCACTGCTaGCCCCGTGGCGTACTCCTCCAGCAGGGTCACCACATACGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PRHDDGLDESHGEHC*PRGVLLQQGHHIRP Trigger: GGGGCGTATGTGGTGACCCTGCTGGAGGAGTACGCCACGGGGCCAGCAGTGCTCACCGTGGCTCTCATCGAGGCCGTCGTCGTGTCTTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
||
| CDS GCA 90 bp | GAACCAAGACACGACGACGGCCTCGATGAGAGCCACGGTGAGCACTaGTGGCCCCGTGGCGTACTCCTCCAGCAGGGTCACCACATACGC | + |
|
Preference number: 5 (lower is better) Translates to: EPRHDDGLDESHGEH*WPRGVLLQQGHHIR Trigger: GCGTATGTGGTGACCCTGCTGGAGGAGTACGCCACGGGGCCAGCAGTGCTCACCGTGGCTCTCATCGAGGCCGTCGTCGTGTCTTGGTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
||
| CDS CCA 90 bp | GTGAATCTCAGCCACCAGGGTGGTGGTGGCAGCTGGCGTAGAGTGTaGCGCTTCATCCCCAGCGCTTGTACTGGGAACTGCGGAGTACCC | + |
|
Preference number: 5 (lower is better) Translates to: VNLSHQGGGGSWRRV*RFIPSACTGNCGVP Trigger: GGGTACTCCGCAGTTCCCAGTACAAGCGCTGGGGATGAAGCGCCACACTCTACGCCAGCTGCCACCACCACCCTGGTGGCTGAGATTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 ENSMUST00000129572.3 |
||
| CDS CCA 90 bp | CCGTTCCCCTTGGTGAATCTCAGCCACCAGGGTGGTGGTGGCAGCTaGCGTAGAGTGTGGCGCTTCATCCCCAGCGCTTGTACTGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PFPLVNLSHQGGGGS*RRVWRFIPSACTGN Trigger: GTTCCCAGTACAAGCGCTGGGGATGAAGCGCCACACTCTACGCCAGCTGCCACCACCACCCTGGTGGCTGAGATTCACCAAGGGGAACGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 ENSMUST00000129572.3 |
||
| CDS GCA 90 bp | TGGCGTAGAGTGTGGCGCTTCATCCCCAGCGCTTGTACTGGGAACTaGGGAGTACCCATTGGATATTTGTCCAGGCCCTGCCTTGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: WRRVWRFIPSACTGN*GVPIGYLSRPCLVC Trigger: GCAGACAAGGCAGGGCCTGGACAAATATCCAATGGGTACTCCGCAGTTCCCAGTACAAGCGCTGGGGATGAAGCGCCACACTCTACGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 ENSMUST00000129572.3 |
||
| CDS TCA 90 bp | CCCTGCGCTTGGCCCAGATGTGAGGAAACTCATCCAACACAGCTGTaGTCACACCTTCCAGGCCTGCGAACGTACTATCCAAACCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: PCAWPRCEETHPTQL*SHLPGLRTYYPNPA Trigger: CGCTGGGTTTGGATAGTACGTTCGCAGGCCTGGAAGGTGTGATCACAGCTGTGTTGGATGAGTTTCCTCACATCTGGGCCAAGCGCAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
||
| CDS GCA 90 bp | TGTACTGGGAACTGCGGAGTACCCATTGGATATTTGTCCAGGCCCTaGCTTGTCTGCTGGTGTGGGGACACCCTTCTGCAGAACACCATT | + |
|
Preference number: 5 (lower is better) Translates to: CTGNCGVPIGYLSRP*LVCWCGDTLLQNTI Trigger: AATGGTGTTCTGCAGAAGGGTGTCCCCACACCAGCAGACAAGGCAGGGCCTGGACAAATATCCAATGGGTACTCCGCAGTTCCCAGTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 ENSMUST00000129572.3 |
||
| CDS TCA 90 bp | GCAAGTAAAACTCCTCAGCAGGTGACGTGGAATGGAGTGTCCAGGTaGTGTTGTCCTGGGCGAAGTAGTTGGTGCAGTTGCCAGTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ASKTPQQVTWNGVSR*CCPGRSSWCSCQCS Trigger: GGAACACTGGCAACTGCACCAACTACTTCGCCCAGGACAACATCACCTGGACACTCCATTCCACGTCACCTGCTGAGGAGTTTTACTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
||
| CDS TCA 90 bp | ATGACCACGATGAGCACAAACCATTCCCTGCGCTTGGCCCAGATGTaGGGAAACTCATCCAACACAGCTGTGATCACACCTTCCAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: MTTMSTNHSLRLAQM*GNSSNTAVITPSRP Trigger: AGGCCTGGAAGGTGTGATCACAGCTGTGTTGGATGAGTTTCCTCACATCTGGGCCAAGCGCAGGGAATGGTTTGTGCTCATCGTGGTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
||
| CDS GCA 90 bp | AACTGCGGAGTACCCATTGGATATTTGTCCAGGCCCTGCCTTGTCTaGTGGTGTGGGGACACCCTTCTGCAGAACACCATTTTCTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: NCGVPIGYLSRPCLV*WCGDTLLQNTIFLA Trigger: TGCCAAGAAAATGGTGTTCTGCAGAAGGGTGTCCCCACACCAGCAGACAAGGCAGGGCCTGGACAAATATCCAATGGGTACTCCGCAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 ENSMUST00000129572.3 |
||
| CDS CCA 90 bp | AGTACCCATTGGATATTTGTCCAGGCCCTGCCTTGTCTGCTGGTGTaGGGACACCCTTCTGCAGAACACCATTTTCTTGGCAGTCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: STHWIFVQALPCLLV*GHPSAEHHFLGSPL Trigger: AAGAGGACTGCCAAGAAAATGGTGTTCTGCAGAAGGGTGTCCCCACACCAGCAGACAAGGCAGGGCCTGGACAAATATCCAATGGGTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 ENSMUST00000129572.3 |
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| CDS-3UTR CAA 90 bp | TCCTCTCCTCACATATCCAAGTCAGCTCAGCCGTGTCACCAGCTAATGTGGCAGTCTTGGCAGTCCTCTTaGTCCTTACACTCTGACAGC | + |
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Preference number: 5 (lower is better) Translates to: SSPHISKSAQPCHQLMWQSWQSS*SLHSDS Trigger: GCTGTCAGAGTGTAAGGACAAAGAGGACTGCCAAGA...CTGCCACATTAGCTGGTGACACGGCTGAGCTGACTTGGATATGTGAGGAGAGGA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR CAA 90 bp | TCTTCCTTTCTTAACCTCACAGCAGCACGTGGGTTACAGGGTTCTAGTAGATTCGGTCTCCCGTTCCCCTaGGTGAATCTCAGCCACCAG | + |
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Preference number: 5 (lower is better) Translates to: SSFLNLTAARGLQGSSRFGLPFP*VNLSHQ Trigger: CTGGTGGCTGAGATTCACCAAGGGGAACGGGAGACC...GAATCTACTAGAACCCTGTAACCCACGTGCTGCTGTGAGGTTAAGAAAGGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR CAA 90 bp | TCATACCCAGAACATGATACAGACGTTCACAGACCTAATCTAAACCTGAAGCTATGTCCAGGCCCTGCCTaGTCTGCTGGTGTGGGGACA | + |
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Preference number: 5 (lower is better) Translates to: SYPEHDTDVHRPNLNLKLCPGPA*SAGVGT Trigger: TGTCCCCACACCAGCAGACAAGGCAGGGCCTGGACA...TAGCTTCAGGTTTAGATTAGGTCTGTGAACGTCTGTATCATGTTCTGGGTATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR CAA 90 bp | CAGTGTAGCGTCTTTACGTCTTCCTTTCTTAACCTCACAGCAGCACGTGGGTTATCTTGGCAGTCCTCTTaGTCCTTACACTCTGACAGC | + |
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Preference number: 5 (lower is better) Translates to: QCSVFTSSFLNLTAARGLSWQSS*SLHSDS Trigger: GCTGTCAGAGTGTAAGGACAAAGAGGACTGCCAAGA...TAACCCACGTGCTGCTGTGAGGTTAAGAAAGGAAGACGTAAAGACGCTACACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR CAA 90 bp | CCTAATCTAAACCTGAAGCTAGCTGATGACTGGGTGGCGTTCATCCCCTCCTTCCAGAACACCATTTTCTaGGCAGTCCTCTTTGTCCTT | + |
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Preference number: 5 (lower is better) Translates to: PNLNLKLADDWVAFIPSFQNTIF*AVLFVL Trigger: AAGGACAAAGAGGACTGCCAAGAAAATGGTGTTCTG...GAAGGAGGGGATGAACGCCACCCAGTCATCAGCTAGCTTCAGGTTTAGATTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR CAA 90 bp | TACCCAGAACATGATACAGACGTTCACAGACCTAATCTAAACCTGAAGCTAGCTGGTCCTGGAGTCCCTTaGACTGATGGATCTGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: YPEHDTDVHRPNLNLKLAGPGVP*TDGSAG Trigger: TCCTGCAGATCCATCAGTCAAAGGGACTCCAGGACC...AGCTAGCTTCAGGTTTAGATTAGGTCTGTGAACGTCTGTATCATGTTCTGGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR CAA 90 bp | GTGGTTTATGTATTCATGAACACTGAAGGCTTTAGAAGCAAACAGATGCAGGGCGGTCCTGGAGTCCCTTaGACTGATGGATCTGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: VVYVFMNTEGFRSKQMQGGPGVP*TDGSAG Trigger: TCCTGCAGATCCATCAGTCAAAGGGACTCCAGGACC...GCCCTGCATCTGTTTGCTTCTAAAGCCTTCAGTGTTCATGAATACATAAACCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR CAA 90 bp | TACCCAGAACATGATACAGACGTTCACAGACCTAATCTAAACCTGAAGCTAGCTGTACCCATTGGATATTaGTCCAGGCCCTGCCTTGTC | + |
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Preference number: 5 (lower is better) Translates to: YPEHDTDVHRPNLNLKLAVPIGY*SRPCLV Trigger: GACAAGGCAGGGCCTGGACAAATATCCAATGGGTAC...AGCTAGCTTCAGGTTTAGATTAGGTCTGTGAACGTCTGTATCATGTTCTGGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR CAA 90 bp | ATGCTACTGAGAAAATATATATGGCTAGCAAGACATCCCTGTTTTCTCTTAGGTGGTCTCCCGTTCCCCTaGGTGAATCTCAGCCACCAG | + |
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Preference number: 5 (lower is better) Translates to: MLLRKYIWLARHPCFLLGGLPFP*VNLSHQ Trigger: CTGGTGGCTGAGATTCACCAAGGGGAACGGGAGACC...ACCTAAGAGAAAACAGGGATGTCTTGCTAGCCATATATATTTTCTCAGTAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR CAA 90 bp | TCAGTTTTCAGTGTAGCGTCTTTACGTCTTCCTTTCTTAACCTCACAGCAGCACCAGAACACCATTTTCTaGGCAGTCCTCTTTGTCCTT | + |
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Preference number: 5 (lower is better) Translates to: SVFSVASLRLPFLTSQQHQNTIF*AVLFVL Trigger: AAGGACAAAGAGGACTGCCAAGAAAATGGTGTTCTG...GTGCTGCTGTGAGGTTAAGAAAGGAAGACGTAAAGACGCTACACTGAAAACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR CAA 90 bp | CTACAGAGTTCTATGCTACTGAGAAAATATATATGGCTAGCAAGACATCCCTGTGTACCCATTGGATATTaGTCCAGGCCCTGCCTTGTC | + |
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Preference number: 5 (lower is better) Translates to: LQSSMLLRKYIWLARHPCVPIGY*SRPCLV Trigger: GACAAGGCAGGGCCTGGACAAATATCCAATGGGTAC...ACAGGGATGTCTTGCTAGCCATATATATTTTCTCAGTAGCATAGAACTCTGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR CAA 90 bp | TCATACCCAGAACATGATACAGACGTTCACAGACCTAATCTAAACCTGAAGCTAACCTTGCCAGACGTTTaGACTCCTTTCCAGATGCTG | + |
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Preference number: 5 (lower is better) Translates to: SYPEHDTDVHRPNLNLKLTLPDV*TPFQML Trigger: CAGCATCTGGAAAGGAGTCAAAACGTCTGGCAAGGT...TAGCTTCAGGTTTAGATTAGGTCTGTGAACGTCTGTATCATGTTCTGGGTATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR CAA 90 bp | TCATACCCAGAACATGATACAGACGTTCACAGACCTAATCTAAACCTGAAGCTATTGGAAAAGCCGGAGTaGGGGTGGACTCATCAAAAA | + |
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Preference number: 5 (lower is better) Translates to: SYPEHDTDVHRPNLNLKLLEKPE*GWTHQK Trigger: TTTTTGATGAGTCCACCCCAACTCCGGCTTTTCCAA...TAGCTTCAGGTTTAGATTAGGTCTGTGAACGTCTGTATCATGTTCTGGGTATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS-3UTR CAA 90 bp | GCTACTGAGAAAATATATATGGCTAGCAAGACATCCCTGTTTTCTCTTAGGTGGTTGGAAAAGCCGGAGTaGGGGTGGACTCATCAAAAA | + |
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Preference number: 5 (lower is better) Translates to: ATEKIYMASKTSLFSLRWLEKPE*GWTHQK Trigger: TTTTTGATGAGTCCACCCCAACTCCGGCTTTTCCAA...CCACCTAAGAGAAAACAGGGATGTCTTGCTAGCCATATATATTTTCTCAGTAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS CCA 90 bp | TGTTTCAGGAGTGATACTTTTAATAATGCGCTCCTTAAGTGTCCCTaGAGTGCTGATCAGCCGATAAATGATGTATATAGGGATGCAGAT | + |
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Preference number: 5 (lower is better) Translates to: CFRSDTFNNALLKCP*SADQPINDVYRDAD Trigger: ATCTGCATCCCTATATACATCATTTATCGGCTGATCAGCACTCCAGGGACACTTAAGGAGCGCATTATTAAAAGTATCACTCCTGAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS GCA 72 bp | CACGACGACGGCCTCGATGAGAGCCACGGTGAGCACTaGTGGCCCCGTGGCGTACTCCTCCAGCAGGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: HDDGLDESHGEH*WPRGVLLQQGH Trigger: GTGACCCTGCTGGAGGAGTACGCCACGGGGCCAGCAGTGCTCACCGTGGCTCTCATCGAGGCCGTCGTCGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS CCA 72 bp | GACGACGGCCTCGATGAGAGCCACGGTGAGCACTGCTaGCCCCGTGGCGTACTCCTCCAGCAGGGTCACCAC | + |
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Preference number: 6 (lower is better) Translates to: DDGLDESHGEHC*PRGVLLQQGHH Trigger: GTGGTGACCCTGCTGGAGGAGTACGCCACGGGGCCAGCAGTGCTCACCGTGGCTCTCATCGAGGCCGTCGTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS CCA 72 bp | AGCCACCAGGGTGGTGGTGGCAGCTGGCGTAGAGTGTaGCGCTTCATCCCCAGCGCTTGTACTGGGAACTGC | + |
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Preference number: 6 (lower is better) Translates to: SHQGGGGSWRRV*RFIPSACTGNC Trigger: GCAGTTCCCAGTACAAGCGCTGGGGATGAAGCGCCACACTCTACGCCAGCTGCCACCACCACCCTGGTGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 ENSMUST00000129572.3 |
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| CDS CCA 72 bp | TTGGTGAATCTCAGCCACCAGGGTGGTGGTGGCAGCTaGCGTAGAGTGTGGCGCTTCATCCCCAGCGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: LVNLSHQGGGGS*RRVWRFIPSAC Trigger: ACAAGCGCTGGGGATGAAGCGCCACACTCTACGCCAGCTGCCACCACCACCCTGGTGGCTGAGATTCACCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 ENSMUST00000129572.3 |
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| CDS CAA 90 bp | GGCGCTTCATCCCCAGCGCTTGTACTGGGAACTGCGGAGTACCCATaGGATATTTGTCCAGGCCCTGCCTTGTCTGCTGGTGTGGGGACA | + |
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Preference number: 6 (lower is better) Translates to: GASSPALVLGTAEYP*DICPGPALSAGVGT Trigger: TGTCCCCACACCAGCAGACAAGGCAGGGCCTGGACAAATATCCAATGGGTACTCCGCAGTTCCCAGTACAAGCGCTGGGGATGAAGCGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 ENSMUST00000129572.3 |
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| CDS CAA 90 bp | ATCCCCAGCGCTTGTACTGGGAACTGCGGAGTACCCATTGGATATTaGTCCAGGCCCTGCCTTGTCTGCTGGTGTGGGGACACCCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: IPSACTGNCGVPIGY*SRPCLVCWCGDTLL Trigger: CAGAAGGGTGTCCCCACACCAGCAGACAAGGCAGGGCCTGGACAAATATCCAATGGGTACTCCGCAGTTCCCAGTACAAGCGCTGGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 ENSMUST00000129572.3 |
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| CDS GCA 72 bp | GTGTGGCGCTTCATCCCCAGCGCTTGTACTGGGAACTaGGGAGTACCCATTGGATATTTGTCCAGGCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: VWRFIPSACTGN*GVPIGYLSRPC Trigger: GCAGGGCCTGGACAAATATCCAATGGGTACTCCGCAGTTCCCAGTACAAGCGCTGGGGATGAAGCGCCACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 ENSMUST00000129572.3 |
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| CDS TCA 72 bp | GTACTCCTCCAGCAGGGTCACCACATACGCCCCTCCTaGTGTCAGTGTGAGCAGGGATCCCAAGATGCAAGT | + |
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Preference number: 6 (lower is better) Translates to: VLLQQGHHIRPS*CQCEQGSQDAS Trigger: ACTTGCATCTTGGGATCCCTGCTCACACTGACATCAGGAGGGGCGTATGTGGTGACCCTGCTGGAGGAGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS GCA 72 bp | GGCCCTGCCTTGTCTGCTGGTGTGGGGACACCCTTCTaGAGAACACCATTTTCTTGGCAGTCCTCTTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: GPALSAGVGTPF*RTPFSWQSSLS Trigger: GGACAAAGAGGACTGCCAAGAAAATGGTGTTCTGCAGAAGGGTGTCCCCACACCAGCAGACAAGGCAGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 ENSMUST00000129572.3 |
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| CDS GCA 72 bp | AACTGCGGAGTACCCATTGGATATTTGTCCAGGCCCTaGCTTGTCTGCTGGTGTGGGGACACCCTTCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: NCGVPIGYLSRP*LVCWCGDTLLQ Trigger: CTGCAGAAGGGTGTCCCCACACCAGCAGACAAGGCAGGGCCTGGACAAATATCCAATGGGTACTCCGCAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 ENSMUST00000129572.3 |
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| CDS CAA 72 bp | GCTTGTACTGGGAACTGCGGAGTACCCATTGGATATTaGTCCAGGCCCTGCCTTGTCTGCTGGTGTGGGGAC | + |
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Preference number: 6 (lower is better) Translates to: ACTGNCGVPIGY*SRPCLVCWCGD Trigger: GTCCCCACACCAGCAGACAAGGCAGGGCCTGGACAAATATCCAATGGGTACTCCGCAGTTCCCAGTACAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 ENSMUST00000129572.3 |
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| CDS CAA 72 bp | TCCCCAGCGCTTGTACTGGGAACTGCGGAGTACCCATaGGATATTTGTCCAGGCCCTGCCTTGTCTGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: SPALVLGTAEYP*DICPGPALSAG Trigger: ACCAGCAGACAAGGCAGGGCCTGGACAAATATCCAATGGGTACTCCGCAGTTCCCAGTACAAGCGCTGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 ENSMUST00000129572.3 |
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| CDS TCA 72 bp | ACTCCTCAGCAGGTGACGTGGAATGGAGTGTCCAGGTaGTGTTGTCCTGGGCGAAGTAGTTGGTGCAGTTGC | + |
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Preference number: 6 (lower is better) Translates to: TPQQVTWNGVSR*CCPGRSSWCSC Trigger: GCAACTGCACCAACTACTTCGCCCAGGACAACATCACCTGGACACTCCATTCCACGTCACCTGCTGAGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS TCA 72 bp | CTGCCAGCTGATGGTCCCCAGGTCCTGGAGTCCCTTTaGCTGATGGATCTGCAGGACATGGCGCAAGTAAAA | + |
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Preference number: 6 (lower is better) Translates to: LPADGPQVLESL*LMDLQDMAQVK Trigger: TTTTACTTGCGCCATGTCCTGCAGATCCATCAGTCAAAGGGACTCCAGGACCTGGGGACCATCAGCTGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS CCA 72 bp | TGGATATTTGTCCAGGCCCTGCCTTGTCTGCTGGTGTaGGGACACCCTTCTGCAGAACACCATTTTCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: WIFVQALPCLLV*GHPSAEHHFLG Trigger: GCCAAGAAAATGGTGTTCTGCAGAAGGGTGTCCCCACACCAGCAGACAAGGCAGGGCCTGGACAAATATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 ENSMUST00000129572.3 |
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| CDS TCA 72 bp | ATGAGCACAAACCATTCCCTGCGCTTGGCCCAGATGTaGGGAAACTCATCCAACACAGCTGTGATCACACCT | + |
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Preference number: 6 (lower is better) Translates to: MSTNHSLRLAQM*GNSSNTAVITP Trigger: AGGTGTGATCACAGCTGTGTTGGATGAGTTTCCTCACATCTGGGCCAAGCGCAGGGAATGGTTTGTGCTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS GCA 72 bp | GATGGCAAAGAATGTGGATGCTGGCATGTTAGCTATTaGCTCCGCATATGTGATGAAAAGGAGGCTGGGGCC | + |
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Preference number: 6 (lower is better) Translates to: DGKECGCWHVSY*LRICDEKEAGA Trigger: GGCCCCAGCCTCCTTTTCATCACATATGCGGAGGCAATAGCTAACATGCCAGCATCCACATTCTTTGCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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| CDS CCA 72 bp | AGCATTCATGCGGATGTCCCCACACGGAATTTCCGTTaGTGTTTCAGGAGTGATACTTTTAATAATGCGCTC | + |
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Preference number: 6 (lower is better) Translates to: SIHADVPTRNFR*CFRSDTFNNAL Trigger: GAGCGCATTATTAAAAGTATCACTCCTGAAACACCAACGGAAATTCCGTGTGGGGACATCCGCATGAATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021195.11 ENSMUST00000108402.9 |
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