Pregenerated sensors for SLC6A20B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025243Ensembl transcript IDs: ENSMUST00000026273.11, ENSMUST00000163397.9, ENSMUST00000168824.9
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGCGCTGGCTCCCACTGCACTCCTCCATTCTCCTGGATGGACGGTaGGATGTTGAGTGTTTTCCTGTACCAGAAGTACTGTGTCGACGA | + |
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Preference number: 1 (lower is better) Translates to: QRWLPLHSSILLDGR*DVECFPVPEVLCRR Trigger: TCGTCGACACAGTACTTCTGGTACAGGAAAACACTCAACATCTCACCGTCCATCCAGGAGAATGGAGGAGTGCAGTGGGAGCCAGCGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163397.9 ENSMUST00000168824.9 |
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| 3UTR TCA 90 bp | GCTCCCACTGCACTCCTCCATTCTCCTGGATGGACGGTGAGATGTTaGGTGTTTTCCTGTACCAGAAGTACTGTGTCGACGAAGCCTTCT | + |
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Preference number: 1 (lower is better) Translates to: APTALLHSPGWTVRC*VFSCTRSTVSTKPS Trigger: AGAAGGCTTCGTCGACACAGTACTTCTGGTACAGGAAAACACTCAACATCTCACCGTCCATCCAGGAGAATGGAGGAGTGCAGTGGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163397.9 ENSMUST00000168824.9 |
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| 3UTR CCA 90 bp | GATGTAGTCACTCAGGTAGAAGATAAAGAGGCCGACGATGAGCAGTaGACTCACAAACGCCCACATGACCTTCCAGTACCAGCTGAGGGT | + |
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Preference number: 1 (lower is better) Translates to: DVVTQVEDKEADDEQ*THKRPHDLPVPAEG Trigger: ACCCTCAGCTGGTACTGGAAGGTCATGTGGGCGTTTGTGAGTCCACTGCTCATCGTCGGCCTCTTTATCTTCTACCTGAGTGACTACATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168824.9 |
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| 3UTR GCA 90 bp | TGGCTTGGAAGACTCCATGATGCAGAACTGGAGTCTTTACTGACCTaGTTTCCACGTGAGCCCAAGGTCTTCTTAAAGCCTTTATCCAAA | + |
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Preference number: 1 (lower is better) Translates to: WLGRLHDAELESLLT*FPREPKVFLKPLSK Trigger: TTTGGATAAAGGCTTTAAGAAGACCTTGGGCTCACGTGGAAAGCAGGTCAGTAAAGACTCCAGTTCTGCATCATGGAGTCTTCCAAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| 3UTR CCA 90 bp | AGTCATCTTACTAGCACCAATCTTCTCTTGCAGCACTTTAAGGGCTaGGTAAGGCCAGACCACCAAGTTGCTAAATCCTTTGAACATCCC | + |
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Preference number: 1 (lower is better) Translates to: SHLTSTNLLLQHFKG*VRPDHQVAKSFEHP Trigger: GGGATGTTCAAAGGATTTAGCAACTTGGTGGTCTGGCCTTACCCAGCCCTTAAAGTGCTGCAAGAGAAGATTGGTGCTAGTAAGATGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163397.9 ENSMUST00000168824.9 |
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| 3UTR GCA 90 bp | TCTGTCTCTTATGCTAAAGGTCCAAAGTCGCCTCTTTTTAAGAACTaGTCCATTGTGGGAAATACACTAGACTGGCCAGCTGCTTCCTCT | + |
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Preference number: 1 (lower is better) Translates to: SVSYAKGPKSPLFKN*SIVGNTLDWPAASS Trigger: AGAGGAAGCAGCTGGCCAGTCTAGTGTATTTCCCACAATGGAGCAGTTCTTAAAAAGAGGCGACTTTGGACCTTTAGCATAAGAGACAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| 3UTR GCA 90 bp | TCTAATGTGTGGGAACACTTCACTGTACTTGTTTGGGTAAGTAGATaGCAGGTAGTTCTTCACCTCCTCCAGGTTGCTGACTGTCAGAAA | + |
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Preference number: 1 (lower is better) Translates to: SNVWEHFTVLVWVSR*QVVLHLLQVADCQK Trigger: TTTCTGACAGTCAGCAACCTGGAGGAGGTGAAGAACTACCTGGCATCTACTTACCCAAACAAGTACAGTGAAGTGTTCCCACACATTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168824.9 |
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| 3UTR CCA 90 bp | AAAAGTATACGTCATGGAAGAGGAGGAATAAAAGCTGTTGGGAAGTaGTGGTGCACACCTTTATTCCCAGCACTTGGGATGCACGTAGAT | + |
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Preference number: 1 (lower is better) Translates to: KSIRHGRGGIKAVGK*WCTPLFPALGMHVD Trigger: ATCTACGTGCATCCCAAGTGCTGGGAATAAAGGTGTGCACCACCACTTCCCAACAGCTTTTATTCCTCCTCTTCCATGACGTATACTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| 3UTR CCA 90 bp | CCAGAAAGAAAAGATAGACTGAATTTGTGTTTGTGGAAAGCGGCTTaGCTTGGAAGACTCCATGATGCAGAACTGGAGTCTTTACTGACC | + |
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Preference number: 1 (lower is better) Translates to: PERKDRLNLCLWKAA*LGRLHDAELESLLT Trigger: GGTCAGTAAAGACTCCAGTTCTGCATCATGGAGTCTTCCAAGCCAAGCCGCTTTCCACAAACACAAATTCAGTCTATCTTTTCTTTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| 3UTR TCA 90 bp | AGTACCTCCTGTGGTTTTGGGCTGGGTGATGTCTTAGAATTGATCTaGTATTACCGCTTTGATGATCTCGTTACCGTTGGGATGGTTATA | + |
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Preference number: 1 (lower is better) Translates to: STSCGFGLGDVLELI*YYRFDDLVTVGMVI Trigger: TATAACCATCCCAACGGTAACGAGATCATCAAAGCGGTAATATCAGATCAATTCTAAGACATCACCCAGCCCAAAACCACAGGAGGTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| 3UTR TCA 90 bp | GCTCTATCACCCTGTCAAGGTTTATGTTGGCTGTCAATAAGTGTCTaGAATTTAGTGCTTCCAGGTAGCCATAGTTCTCCAAATCAAGGA | + |
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Preference number: 1 (lower is better) Translates to: ALSPCQGLCWLSISV*NLVLPGSHSSPNQG Trigger: TCCTTGATTTGGAGAACTATGGCTACCTGGAAGCACTAAATTTCAGACACTTATTGACAGCCAACATAAACCTTGACAGGGTGATAGAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| 3UTR CCA 90 bp | TTGAAGCCCAGCTGTGTCTACTGTAATATATTACTCAAAAGCTACTaGGCGTTTTACAGTAAGCACTTCATGTCAACAGCTACAGCAAAC | + |
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Preference number: 1 (lower is better) Translates to: LKPSCVYCNILLKSY*AFYSKHFMSTATAN Trigger: GTTTGCTGTAGCTGTTGACATGAAGTGCTTACTGTAAAACGCCCAGTAGCTTTTGAGTAATATATTACAGTAGACACAGCTGGGCTTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| 3UTR GCA 90 bp | CTACCATTCTGTAACATGTGGGTATCTTGTCAGCAAGAACCAGATTaGAAAGTCCCAGTCTTAAGACTTAGAGAATCAATCACTATCTTC | + |
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Preference number: 1 (lower is better) Translates to: LPFCNMWVSCQQEPD*KVPVLRLRESITIF Trigger: GAAGATAGTGATTGATTCTCTAAGTCTTAAGACTGGGACTTTGCAATCTGGTTCTTGCTGACAAGATACCCACATGTTACAGAATGGTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| 3UTR-3UTR GCA 90 bp | CAGGCCAGGGTGAGGCACAGCGCTGGCTCCCACTGCACTCCTCCATTCTCCTGGTGCTGCCCTGCCGCATaGGCTGTCCCACGGCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: QARVRHSAGSHCTPPFSWCCPAA*AVPRPA Trigger: AGCTGGCCGTGGGACAGCGCATGCGGCAGGGCAGCA...CCAGGAGAATGGAGGAGTGCAGTGGGAGCCAGCGCTGTGCCTCACCCTGGCCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163397.9 ENSMUST00000168824.9 |
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| 3UTR-3UTR GCA 90 bp | GGTGAGGCACAGCGCTGGCTCCCACTGCACTCCTCCATTCTCCTGGATGGACGGTCCAGGCACCAATGCTaGCCTGCCGCATGCGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: GEAQRWLPLHSSILLDGRSRHQC*PAACAV Trigger: GACAGCGCATGCGGCAGGGCAGCATTGGTGCCTGGA...CCGTCCATCCAGGAGAATGGAGGAGTGCAGTGGGAGCCAGCGCTGTGCCTCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163397.9 ENSMUST00000168824.9 |
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| 3UTR-3UTR GCA 90 bp | GACGATGAGCAGTGGACTCACAAACGCCCACATGACCTTCCAGTACCAGCTGAGGCACCAATGCTGCCCTaGCGCATGCGCTGTCCCACG | + |
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Preference number: 2 (lower is better) Translates to: DDEQWTHKRPHDLPVPAEAPMLP*RMRCPT Trigger: CGTGGGACAGCGCATGCGGCAGGGCAGCATTGGTGC...CTCAGCTGGTACTGGAAGGTCATGTGGGCGTTTGTGAGTCCACTGCTCATCGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168824.9 |
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| 3UTR-3UTR GCA 90 bp | AGATTCGGTGCCTCTCAGGATGCACAGATAGACCATCAGCCAGGCCAGGGTGAGTCCAGGCACCAATGCTaGCCTGCCGCATGCGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: RFGASQDAQIDHQPGQGESRHQC*PAACAV Trigger: GACAGCGCATGCGGCAGGGCAGCATTGGTGCCTGGA...CTCACCCTGGCCTGGCTGATGGTCTATCTGTGCATCCTGAGAGGCACCGAATCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163397.9 ENSMUST00000168824.9 |
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| 3UTR-3UTR CCA 90 bp | GTGAGGCACAGCGCTGGCTCCCACTGCACTCCTCCATTCTCCTGGATGGACGGTCTCCAGGTACAGGAGTaGCATCCCCTCCACAATGAG | + |
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Preference number: 2 (lower is better) Translates to: VRHSAGSHCTPPFSWMDGLQVQE*HPLHNE Trigger: CTCATTGTGGAGGGGATGCCACTCCTGTACCTGGAG...ACCGTCCATCCAGGAGAATGGAGGAGTGCAGTGGGAGCCAGCGCTGTGCCTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163397.9 ENSMUST00000168824.9 |
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| 3UTR-3UTR CCA 90 bp | AGTCACCACGTGGCCCTGAGTAGCATCCCAGGCTTGGTACTGCAGCGTTCCCGTCACGGCAGGGGATCCTaGAAGGAGTGGAAGAGGTAC | + |
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Preference number: 2 (lower is better) Translates to: SHHVALSSIPGLVLQRSRHGRGS*KEWKRY Trigger: GTACCTCTTCCACTCCTTCCAGGATCCCCTGCCGTG...ACGGGAACGCTGCAGTACCAAGCCTGGGATGCTACTCAGGGCCACGTGGTGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168824.9 |
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| 3UTR-3UTR TCA 90 bp | AGTCACCACGTGGCCCTGAGTAGCATCCCAGGCTTGGTACTGCAGCGTTCCCGTTCTCTACCAGCACAATaGGCAGCAGAGACAGCGTGG | + |
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Preference number: 2 (lower is better) Translates to: SHHVALSSIPGLVLQRSRSLPAQ*AAETAW Trigger: CCACGCTGTCTCTGCTGCTCATTGTGCTGGTAGAGA...ACGGGAACGCTGCAGTACCAAGCCTGGGATGCTACTCAGGGCCACGTGGTGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168824.9 |
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| 3UTR-3UTR GCA 90 bp | TGCGTGGCTGCATTGATCCAGGCCTTGGGGTTGGCTAGCTGCTCAATCTTAGGTTCCTCCAGGCACCAATaGTGCCCTGCCGCATGCGCT | + |
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Preference number: 2 (lower is better) Translates to: CVAALIQALGLASCSILGSSRHQ*CPAACA Trigger: AGCGCATGCGGCAGGGCAGCATTGGTGCCTGGAGGA...ACCTAAGATTGAGCAGCTAGCCAACCCCAAGGCCTGGATCAATGCAGCCACGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168824.9 |
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| 3UTR-3UTR CCA 90 bp | GACGATGAGCAGTGGACTCACAAACGCCCACATGACCTTCCAGTACCAGCTGAGCCATTGGTGGCTCCATaGAGTGTGAGGCCCCGGACC | + |
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Preference number: 2 (lower is better) Translates to: DDEQWTHKRPHDLPVPAEPLVAP*SVRPRT Trigger: GGTCCGGGGCCTCACACTCCATGGAGCCACCAATGG...CTCAGCTGGTACTGGAAGGTCATGTGGGCGTTTGTGAGTCCACTGCTCATCGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168824.9 |
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| 3UTR-3UTR GCA 90 bp | GTACTGTGTCGACGAAGCCTTCTCACACTCCTCATCGTAGCCTGTGTGATTACTTGCTGCCCTGCCGCATaGGCTGTCCCACGGCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: VLCRRSLLTLLIVACVITCCPAA*AVPRPA Trigger: AGCTGGCCGTGGGACAGCGCATGCGGCAGGGCAGCA...AGTAATCACACAGGCTACGATGAGGAGTGTGAGAAGGCTTCGTCGACACAGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163397.9 ENSMUST00000168824.9 |
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| 3UTR-3UTR TCA 90 bp | GGCACAGCGCTGGCTCCCACTGCACTCCTCCATTCTCCTGGATGGACGGTGAGAACTCCCTTTACCCACTaGGTCATCTTACTAGCACCA | + |
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Preference number: 2 (lower is better) Translates to: GTALAPTALLHSPGWTVRTPFTH*VILLAP Trigger: TGGTGCTAGTAAGATGACTCAGTGGGTAAAGGGAGT...TCTCACCGTCCATCCAGGAGAATGGAGGAGTGCAGTGGGAGCCAGCGCTGTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163397.9 ENSMUST00000168824.9 |
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| 3UTR-3UTR TCA 90 bp | AGTCACCACGTGGCCCTGAGTAGCATCCCAGGCTTGGTACTGCAGCGTTCCCGTACTCCCTTTACCCACTaGGTCATCTTACTAGCACCA | + |
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Preference number: 2 (lower is better) Translates to: SHHVALSSIPGLVLQRSRTPFTH*VILLAP Trigger: TGGTGCTAGTAAGATGACTCAGTGGGTAAAGGGAGT...ACGGGAACGCTGCAGTACCAAGCCTGGGATGCTACTCAGGGCCACGTGGTGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168824.9 |
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| 3UTR-3UTR TCA 90 bp | AAGAGGCCGACGATGAGCAGTGGACTCACAAACGCCCACATGACCTTCCAGTACGAGGCATACCAAACCTaGAATGGCCTCCTTGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: KRPTMSSGLTNAHMTFQYEAYQT*NGLLGQ Trigger: CTGCCCAAGGAGGCCATTTCAGGTTTGGTATGCCTC...GTACTGGAAGGTCATGTGGGCGTTTGTGAGTCCACTGCTCATCGTCGGCCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168824.9 |
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| 3UTR-3UTR CCA 90 bp | ACGATGAGCAGTGGACTCACAAACGCCCACATGACCTTCCAGTACCAGCTGAGGGCTTCTGGCAGTCGTTaGAGGGTTCGTTGTAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: TMSSGLTNAHMTFQYQLRASGSR*RVRCSW Trigger: CCAGCTACAACGAACCCTCCAACGACTGCCAGAAGC...CCTCAGCTGGTACTGGAAGGTCATGTGGGCGTTTGTGAGTCCACTGCTCATCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168824.9 |
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| 3UTR-3UTR TCA 90 bp | GACGATGAGCAGTGGACTCACAAACGCCCACATGACCTTCCAGTACCAGCTGAGGCAGGTAGCTGGAGATaGTCTTGCTGTCAGTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: DDEQWTHKRPHDLPVPAEAGSWR*SCCQSE Trigger: CTCTGACTGACAGCAAGATCATCTCCAGCTACCTGC...CTCAGCTGGTACTGGAAGGTCATGTGGGCGTTTGTGAGTCCACTGCTCATCGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168824.9 |
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| 3UTR CAA 90 bp | AGGATAATCCTTAGTCACCACGTGGCCCTGAGTAGCATCCCAGGCTaGGTACTGCAGCGTTCCCGTGAGGATGTAGTCACTCAGGTAGAA | + |
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Preference number: 2 (lower is better) Translates to: RIILSHHVALSSIPG*VLQRSREDVVTQVE Trigger: TTCTACCTGAGTGACTACATCCTCACGGGAACGCTGCAGTACCAAGCCTGGGATGCTACTCAGGGCCACGTGGTGACTAAGGATTATCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168824.9 |
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| 3UTR-3UTR CCA 90 bp | ACTCCTCATCGTAGCCTGTGTGATTACTATTCAGTGGGCAGACAGACCACGGCACTCCAGGTACAGGAGTaGCATCCCCTCCACAATGAG | + |
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Preference number: 2 (lower is better) Translates to: TPHRSLCDYYSVGRQTTALQVQE*HPLHNE Trigger: CTCATTGTGGAGGGGATGCCACTCCTGTACCTGGAG...TGCCGTGGTCTGTCTGCCCACTGAATAGTAATCACACAGGCTACGATGAGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163397.9 ENSMUST00000168824.9 |
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| 3UTR-3UTR CCA 90 bp | AAGAGGCCGACGATGAGCAGTGGACTCACAAACGCCCACATGACCTTCCAGTACGTGATTACTATTCAGTaGGCAGACAGACCACGGCAG | + |
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Preference number: 2 (lower is better) Translates to: KRPTMSSGLTNAHMTFQYVITIQ*ADRPRQ Trigger: CTGCCGTGGTCTGTCTGCCCACTGAATAGTAATCAC...GTACTGGAAGGTCATGTGGGCGTTTGTGAGTCCACTGCTCATCGTCGGCCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168824.9 |
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| 3UTR-3UTR CCA 90 bp | AGTAGATGCCAGGTAGTTCTTCACCTCCTCCAGGTTGCTGACTGTCAGAAAGCCATGAGGGCATGCTTCTaGCAGTCGTTGGAGGGTTCG | + |
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Preference number: 2 (lower is better) Translates to: SRCQVVLHLLQVADCQKAMRACF*QSLEGS Trigger: CGAACCCTCCAACGACTGCCAGAAGCATGCCCTCAT...GGCTTTCTGACAGTCAGCAACCTGGAGGAGGTGAAGAACTACCTGGCATCTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168824.9 |
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| 3UTR CAA 90 bp | GTGTACCCTGCAGAGTTGGCTGCTTTTCTGCTCCCTAGCTATACTTaGGCTCTCACAACAGTGACGCTAACTTCTCTTGGGACACTCTCA | + |
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Preference number: 2 (lower is better) Translates to: VYPAELAAFLLPSYT*ALTTVTLTSLGTLS Trigger: TGAGAGTGTCCCAAGAGAAGTTAGCGTCACTGTTGTGAGAGCCAAAGTATAGCTAGGGAGCAGAAAAGCAGCCAACTCTGCAGGGTACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| 3UTR-3UTR TCA 90 bp | AGTGTTTTCCTGTACCAGAAGTACTGTGTCGACGAAGCCTTCTCACACTCCTCAGTGGCTGTGAAACAGTaGCTGACAGGAAGTCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: SVFLYQKYCVDEAFSHSSVAVKQ*LTGSLW Trigger: CCACAGACTTCCTGTCAGTCACTGTTTCACAGCCAC...TGAGGAGTGTGAGAAGGCTTCGTCGACACAGTACTTCTGGTACAGGAAAACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168824.9 |
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| 3UTR CAA 90 bp | AACTCCCTTTACCCACTGAGTCATCTTACTAGCACCAATCTTCTCTaGCAGCACTTTAAGGGCTGGGTAAGGCCAGACCACCAAGTTGCT | + |
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Preference number: 2 (lower is better) Translates to: NSLYPLSHLTSTNLL*QHFKGWVRPDHQVA Trigger: AGCAACTTGGTGGTCTGGCCTTACCCAGCCCTTAAAGTGCTGCAAGAGAAGATTGGTGCTAGTAAGATGACTCAGTGGGTAAAGGGAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163397.9 ENSMUST00000168824.9 |
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| 3UTR-3UTR CCA 90 bp | AATAAGCATAGTTTGTTCCAAAGATGGAACATTGAAGCCCAGCTGTGTCTACTGTGTTTGAACCCAGGCTaGCATCGGCTGCTCCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: NKHSLFQRWNIEAQLCLLCLNPG*HRLLPP Trigger: GGGAGGGAGCAGCCGATGCCAGCCTGGGTTCAAACA...CAGTAGACACAGCTGGGCTTCAATGTTCCATCTTTGGAACAAACTATGCTTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| 3UTR-3UTR CCA 90 bp | ACGATGAGCAGTGGACTCACAAACGCCCACATGACCTTCCAGTACCAGCTGAGGGCAGTTTCTAATGTGTaGGAACACTTCACTGTACTT | + |
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Preference number: 2 (lower is better) Translates to: TMSSGLTNAHMTFQYQLRAVSNV*EHFTVL Trigger: AAGTACAGTGAAGTGTTCCCACACATTAGAAACTGC...CCTCAGCTGGTACTGGAAGGTCATGTGGGCGTTTGTGAGTCCACTGCTCATCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168824.9 |
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| 3UTR-3UTR CCA 90 bp | TATTATTGGTTCCTCATTGAGACATGCAGGCCTCAGAGAAGGTCTTGTACTAGACTTCAGGGCTGGCACTaGGAGGAAGGTCTTCACACT | + |
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Preference number: 2 (lower is better) Translates to: YYWFLIETCRPQRRSCTRLQGWH*EEGLHT Trigger: AGTGTGAAGACCTTCCTCCCAGTGCCAGCCCTGAAG...TCTAGTACAAGACCTTCTCTGAGGCCTGCATGTCTCAATGAGGAACCAATAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| 3UTR CAA 90 bp | TCCTCATTGAGACATGCAGGCCTCAGAGAAGGTCTTGTACTAGATTaGATTCTCACTTGGGGTAGCAGTTGCTTTTCCATGCATGGCACT | + |
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Preference number: 2 (lower is better) Translates to: SSLRHAGLREGLVLD*ILTWGSSCFSMHGT Trigger: AGTGCCATGCATGGAAAAGCAACTGCTACCCCAAGTGAGAATCAAATCTAGTACAAGACCTTCTCTGAGGCCTGCATGTCTCAATGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| 3UTR-3UTR TCA 90 bp | ATAAGCATAGTTTGTTCCAAAGATGGAACATTGAAGCCCAGCTGTGTCTACTGTGTGGCTGTGAAACAGTaGCTGACAGGAAGTCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: ISIVCSKDGTLKPSCVYCVAVKQ*LTGSLW Trigger: CCACAGACTTCCTGTCAGTCACTGTTTCACAGCCAC...ACAGTAGACACAGCTGGGCTTCAATGTTCCATCTTTGGAACAAACTATGCTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| 3UTR-3UTR TCA 90 bp | AAAGATAGACTGAATTTGTGTTTGTGGAAAGCGGCTTGGCTTGGAAGACTCCATGACCTGCTTTCCACGTaGGCCCAAGGTCTTCTTAAA | + |
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Preference number: 2 (lower is better) Translates to: KDRLNLCLWKAAWLGRLHDLLST*AQGLLK Trigger: TTTAAGAAGACCTTGGGCTCACGTGGAAAGCAGGTC...ATGGAGTCTTCCAAGCCAAGCCGCTTTCCACAAACACAAATTCAGTCTATCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| 3UTR-3UTR TCA 90 bp | AAAGATAGACTGAATTTGTGTTTGTGGAAAGCGGCTTGGCTTGGAAGACTCCATAACTGGAGTCTTTACTaGCCTGCTTTCCACGTGAGC | + |
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Preference number: 2 (lower is better) Translates to: KDRLNLCLWKAAWLGRLHNWSLY*PAFHVS Trigger: GCTCACGTGGAAAGCAGGTCAGTAAAGACTCCAGTT...ATGGAGTCTTCCAAGCCAAGCCGCTTTCCACAAACACAAATTCAGTCTATCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| 3UTR-3UTR GCA 90 bp | TATTATTGGTTCCTCATTGAGACATGCAGGCCTCAGAGAAGGTCTTGTACTAGAGTTGGGAAGTGGTGGTaGACACCTTTATTCCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: YYWFLIETCRPQRRSCTRVGKWW*TPLFPA Trigger: TGCTGGGAATAAAGGTGTGCACCACCACTTCCCAAC...TCTAGTACAAGACCTTCTCTGAGGCCTGCATGTCTCAATGAGGAACCAATAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| 3UTR-3UTR GCA 90 bp | CTCAGAGAAGGTCTTGTACTAGATTTGATTCTCACTTGGGGTAGCAGTTGCTTTCCTTCCTGTGTACCCTaGAGAGTTGGCTGCTTTTCT | + |
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Preference number: 2 (lower is better) Translates to: LREGLVLDLILTWGSSCFPSCVP*RVGCFS Trigger: AGAAAAGCAGCCAACTCTGCAGGGTACACAGGAAGG...AAAGCAACTGCTACCCCAAGTGAGAATCAAATCTAGTACAAGACCTTCTCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| 3UTR-3UTR CCA 90 bp | AAAGATAGACTGAATTTGTGTTTGTGGAAAGCGGCTTGGCTTGGAAGACTCCATGCTGTTGGGAAGTGGTaGTGCACACCTTTATTCCCA | + |
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Preference number: 2 (lower is better) Translates to: KDRLNLCLWKAAWLGRLHAVGKW*CTPLFP Trigger: TGGGAATAAAGGTGTGCACCACCACTTCCCAACAGC...ATGGAGTCTTCCAAGCCAAGCCGCTTTCCACAAACACAAATTCAGTCTATCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| 3UTR-3UTR CCA 90 bp | AATAAGCATAGTTTGTTCCAAAGATGGAACATTGAAGCCCAGCTGTGTCTACTGCATGATCTTCAGGGCTaGCACTGGGAGGAAGGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: NKHSLFQRWNIEAQLCLLHDLQG*HWEEGL Trigger: AAGACCTTCCTCCCAGTGCCAGCCCTGAAGATCATG...CAGTAGACACAGCTGGGCTTCAATGTTCCATCTTTGGAACAAACTATGCTTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR CCA 90 bp | TATTATTGGTTCCTCATTGAGACATGCAGGCCTCAGAGAAGGTCTTGTACTAGATGTACCCTGCAGAGTTaGCTGCTTTTCTGCTCCCTA | + |
|
Preference number: 2 (lower is better) Translates to: YYWFLIETCRPQRRSCTRCTLQS*LLFCSL Trigger: TAGGGAGCAGAAAAGCAGCCAACTCTGCAGGGTACA...TCTAGTACAAGACCTTCTCTGAGGCCTGCATGTCTCAATGAGGAACCAATAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR TCA 90 bp | CTCAGAGAAGGTCTTGTACTAGATTTGATTCTCACTTGGGGTAGCAGTTGCTTTAGCAAACACCAAATCTaGACCACTAGTGTGGCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: LREGLVLDLILTWGSSCFSKHQI*TTSVAA Trigger: AGCAGCCACACTAGTGGTTCAGATTTGGTGTTTGCT...AAAGCAACTGCTACCCCAAGTGAGAATCAAATCTAGTACAAGACCTTCTCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR CCA 90 bp | AAAGATAGACTGAATTTGTGTTTGTGGAAAGCGGCTTGGCTTGGAAGACTCCATTTGCTTTTCCATGCATaGCACTCTGGCTCTATCACC | + |
|
Preference number: 2 (lower is better) Translates to: KDRLNLCLWKAAWLGRLHLLFHA*HSGSIT Trigger: GGTGATAGAGCCAGAGTGCCATGCATGGAAAAGCAA...ATGGAGTCTTCCAAGCCAAGCCGCTTTCCACAAACACAAATTCAGTCTATCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR TCA 90 bp | TATTATTGGTTCCTCATTGAGACATGCAGGCCTCAGAGAAGGTCTTGTACTAGATCCAAGGACAAGTTTTaGCAGTTGTCACTTCAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: YYWFLIETCRPQRRSCTRSKDKF*QLSLQV Trigger: GACCTGAAGTGACAACTGTCAAAACTTGTCCTTGGA...TCTAGTACAAGACCTTCTCTGAGGCCTGCATGTCTCAATGAGGAACCAATAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR TCA 90 bp | AAAGATAGACTGAATTTGTGTTTGTGGAAAGCGGCTTGGCTTGGAAGACTCCATTGGTTTTGGGCTGGGTaGTGTCTTAGAATTGATCTG | + |
|
Preference number: 2 (lower is better) Translates to: KDRLNLCLWKAAWLGRLHWFWAG*CLRIDL Trigger: CAGATCAATTCTAAGACATCACCCAGCCCAAAACCA...ATGGAGTCTTCCAAGCCAAGCCGCTTTCCACAAACACAAATTCAGTCTATCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR GCA 90 bp | AAAGATAGACTGAATTTGTGTTTGTGGAAAGCGGCTTGGCTTGGAAGACTCCATAGTTGGCTGCTTTTCTaGTCCCTAGCTATACTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: KDRLNLCLWKAAWLGRLHSWLLF*SLAILW Trigger: CCAAAGTATAGCTAGGGAGCAGAAAAGCAGCCAACT...ATGGAGTCTTCCAAGCCAAGCCGCTTTCCACAAACACAAATTCAGTCTATCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR CCA 90 bp | TATTATTGGTTCCTCATTGAGACATGCAGGCCTCAGAGAAGGTCTTGTACTAGATTTATTCCCAGCACTTaGGATGCACGTAGATCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: YYWFLIETCRPQRRSCTRFIPST*DARRSE Trigger: CTCAGATCTACGTGCATCCCAAGTGCTGGGAATAAA...TCTAGTACAAGACCTTCTCTGAGGCCTGCATGTCTCAATGAGGAACCAATAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR CCA 90 bp | AATAAGCATAGTTTGTTCCAAAGATGGAACATTGAAGCCCAGCTGTGTCTACTGAGGAATAAAAGCTGTTaGGAAGTGGTGGTGCACACC | + |
|
Preference number: 2 (lower is better) Translates to: NKHSLFQRWNIEAQLCLLRNKSC*EVVVHT Trigger: GGTGTGCACCACCACTTCCCAACAGCTTTTATTCCT...CAGTAGACACAGCTGGGCTTCAATGTTCCATCTTTGGAACAAACTATGCTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR TCA 90 bp | AATAAGCATAGTTTGTTCCAAAGATGGAACATTGAAGCCCAGCTGTGTCTACTGCACTCTCAGTTTTCCTaGCAGAAAGAAGCCTTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: NKHSLFQRWNIEAQLCLLHSQFS*QKEAFA Trigger: AGCAAAGGCTTCTTTCTGTCAGGAAAACTGAGAGTG...CAGTAGACACAGCTGGGCTTCAATGTTCCATCTTTGGAACAAACTATGCTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR GCA 90 bp | CTCAGAGAAGGTCTTGTACTAGATTTGATTCTCACTTGGGGTAGCAGTTGCTTTCAGCAAGAACCAGATTaGAAAGTCCCAGTCTTAAGA | + |
|
Preference number: 2 (lower is better) Translates to: LREGLVLDLILTWGSSCFQQEPD*KVPVLR Trigger: TCTTAAGACTGGGACTTTGCAATCTGGTTCTTGCTG...AAAGCAACTGCTACCCCAAGTGAGAATCAAATCTAGTACAAGACCTTCTCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR GCA 90 bp | AATAAGCATAGTTTGTTCCAAAGATGGAACATTGAAGCCCAGCTGTGTCTACTGACATCAATATGTGTGTaGGTGCTCAAAGAGTCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: NKHSLFQRWNIEAQLCLLTSICV*VLKESQ Trigger: CTGGGACTCTTTGAGCACGCACACACATATTGATGT...CAGTAGACACAGCTGGGCTTCAATGTTCCATCTTTGGAACAAACTATGCTTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR TCA 90 bp | TATTATTGGTTCCTCATTGAGACATGCAGGCCTCAGAGAAGGTCTTGTACTAGAAAGTCTAGGGCAGTGTaGGTTGAAAATCAAAACTCT | + |
|
Preference number: 2 (lower is better) Translates to: YYWFLIETCRPQRRSCTRKSRAV*VENQNS Trigger: AGAGTTTTGATTTTCAACTCACACTGCCCTAGACTT...TCTAGTACAAGACCTTCTCTGAGGCCTGCATGTCTCAATGAGGAACCAATAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR TCA 90 bp | TATTATTGGTTCCTCATTGAGACATGCAGGCCTCAGAGAAGGTCTTGTACTAGAATGCATAAAACAGACTaGAAACTACGCTTCAGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: YYWFLIETCRPQRRSCTRMHKTD*KLRFRS Trigger: GCTTCTGAAGCGTAGTTTTCAGTCTGTTTTATGCAT...TCTAGTACAAGACCTTCTCTGAGGCCTGCATGTCTCAATGAGGAACCAATAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR CCA 90 bp | AAAGATAGACTGAATTTGTGTTTGTGGAAAGCGGCTTGGCTTGGAAGACTCCATAAGCCTCAGCATTTATaGTCAGAGTTAGGTTTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: KDRLNLCLWKAAWLGRLHKPQHL*SELGFC Trigger: ACAGAAACCTAACTCTGACCATAAATGCTGAGGCTT...ATGGAGTCTTCCAAGCCAAGCCGCTTTCCACAAACACAAATTCAGTCTATCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR CCA 90 bp | AAAGATAGACTGAATTTGTGTTTGTGGAAAGCGGCTTGGCTTGGAAGACTCCATTGCTTCAAGAAATACTaGATGGGTGAAGTAAGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: KDRLNLCLWKAAWLGRLHCFKKY*MGEVRE Trigger: CTCTCTTACTTCACCCATCCAGTATTTCTTGAAGCA...ATGGAGTCTTCCAAGCCAAGCCGCTTTCCACAAACACAAATTCAGTCTATCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR TCA 90 bp | ATAAGCATAGTTTGTTCCAAAGATGGAACATTGAAGCCCAGCTGTGTCTACTGTGAAATACTGGATGGGTaGAGTAAGAGAGTGTTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: ISIVCSKDGTLKPSCVYCEILDG*SKRVFE Trigger: TTCAAACACTCTCTTACTTCACCCATCCAGTATTTC...ACAGTAGACACAGCTGGGCTTCAATGTTCCATCTTTGGAACAAACTATGCTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR TCA 90 bp | ATAAGCATAGTTTGTTCCAAAGATGGAACATTGAAGCCCAGCTGTGTCTACTGTTTGACAGCCCTGCAGTaGTCTTCTTTAACTCATTTA | + |
|
Preference number: 2 (lower is better) Translates to: ISIVCSKDGTLKPSCVYCLTALQ*SSLTHL Trigger: TAAATGAGTTAAAGAAGATCACTGCAGGGCTGTCAA...ACAGTAGACACAGCTGGGCTTCAATGTTCCATCTTTGGAACAAACTATGCTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR GCA 90 bp | AATAAGCATAGTTTGTTCCAAAGATGGAACATTGAAGCCCAGCTGTGTCTACTGATGTATTTTCTTCTGTaGTCGCTTCCAAGGACAAGT | + |
|
Preference number: 2 (lower is better) Translates to: NKHSLFQRWNIEAQLCLLMYFLL*SLPRTS Trigger: ACTTGTCCTTGGAAGCGAGCACAGAAGAAAATACAT...CAGTAGACACAGCTGGGCTTCAATGTTCCATCTTTGGAACAAACTATGCTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR GCA 90 bp | ATAAGCATAGTTTGTTCCAAAGATGGAACATTGAAGCCCAGCTGTGTCTACTGTCAAAGAGATACAGGTTaGAGGGTGATAAGGAAGTAT | + |
|
Preference number: 2 (lower is better) Translates to: ISIVCSKDGTLKPSCVYCQRDTG*RVIRKY Trigger: ATACTTCCTTATCACCCTGCAACCTGTATCTCTTTG...ACAGTAGACACAGCTGGGCTTCAATGTTCCATCTTTGGAACAAACTATGCTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR CCA 90 bp | CTCAGAGAAGGTCTTGTACTAGATTTGATTCTCACTTGGGGTAGCAGTTGCTTTCTATTTTGTATTGTTTaGTCTACAGCTCATTTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: LREGLVLDLILTWGSSCFLFCIV*STAHFP Trigger: GGGAAAATGAGCTGTAGACCAAACAATACAAAATAG...AAAGCAACTGCTACCCCAAGTGAGAATCAAATCTAGTACAAGACCTTCTCTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR GCA 90 bp | ATAAGCATAGTTTGTTCCAAAGATGGAACATTGAAGCCCAGCTGTGTCTACTGTTTTAGAGTTGAACTGTaGACACACATCAATATGTGT | + |
|
Preference number: 2 (lower is better) Translates to: ISIVCSKDGTLKPSCVYCFRVEL*THINMC Trigger: ACACATATTGATGTGTGTGCACAGTTCAACTCTAAA...ACAGTAGACACAGCTGGGCTTCAATGTTCCATCTTTGGAACAAACTATGCTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR GCA 90 bp | ATAAGCATAGTTTGTTCCAAAGATGGAACATTGAAGCCCAGCTGTGTCTACTGTACAGAAAGAAGCCTTTaGTCAGAAATGACACAATTT | + |
|
Preference number: 2 (lower is better) Translates to: ISIVCSKDGTLKPSCVYCTERSL*SEMTQF Trigger: AAATTGTGTCATTTCTGAGCAAAGGCTTCTTTCTGT...ACAGTAGACACAGCTGGGCTTCAATGTTCCATCTTTGGAACAAACTATGCTTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR CCA 90 bp | AATAAGCATAGTTTGTTCCAAAGATGGAACATTGAAGCCCAGCTGTGTCTACTGTTTTCTAACCGCTGTTaGTACTGTTTCTCTGTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: NKHSLFQRWNIEAQLCLLFSNRC*YCFSVF Trigger: AAAAACAGAGAAACAGTACCAACAGCGGTTAGAAAA...CAGTAGACACAGCTGGGCTTCAATGTTCCATCTTTGGAACAAACTATGCTTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCCAGGGTGAGGCACAGCGCTGGCTCCCACTGCACTCCTCCATTCTCCTGGAGCACCAATCTTCTCTaGCAGCACTTTAAGGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: QARVRHSAGSHCTPPFSWSTNLL*QHFKGW Trigger: CCAGCCCTTAAAGTGCTGCAAGAGAAGATTGGTGCT...CCAGGAGAATGGAGGAGTGCAGTGGGAGCCAGCGCTGTGCCTCACCCTGGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163397.9 ENSMUST00000168824.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCAGGCCAGGGTGAGGCACAGCGCTGGCTCCCACTGCACTCCTCCATTCTCGGCCAGACCACCAAGTaGCTAAATCCTTTGAACATC | + |
|
Preference number: 3 (lower is better) Translates to: QPGQGEAQRWLPLHSSILGQTTK*LNPLNI Trigger: GATGTTCAAAGGATTTAGCAACTTGGTGGTCTGGCC...GAGAATGGAGGAGTGCAGTGGGAGCCAGCGCTGTGCCTCACCCTGGCCTGGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163397.9 ENSMUST00000168824.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTCACCACGTGGCCCTGAGTAGCATCCCAGGCTTGGTACTGCAGCGTTCCCGTCAGGTGTTGATGACATaGAAGTACACAGAGGCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: SHHVALSSIPGLVLQRSRQVLMT*KYTEAK Trigger: TTTGGCCTCTGTGTACTTCAATGTCATCAACACCTG...ACGGGAACGCTGCAGTACCAAGCCTGGGATGCTACTCAGGGCCACGTGGTGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168824.9 |
||
| 3UTR GCA 72 bp | GTGGCTGCATTGATCCAGGCCTTGGGGTTGGCTAGCTaGTCAATCTTAGGTGTGAACATGTATGCCAGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: VAALIQALGLAS*SILGVNMYARP Trigger: TGGCCTGGCATACATGTTCACACCTAAGATTGAGCAGCTAGCCAACCCCAAGGCCTGGATCAATGCAGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168824.9 |
||
| 3UTR-3UTR CAA 90 bp | TGCGTGGCTGCATTGATCCAGGCCTTGGGGTTGGCTAGCTGCTCAATCTTAGGTAAGTTGCTAAATCCTTaGAACATCCCTCCTGAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: CVAALIQALGLASCSILGKLLNP*NIPPEC Trigger: GCACTCAGGAGGGATGTTCAAAGGATTTAGCAACTT...ACCTAAGATTGAGCAGCTAGCCAACCCCAAGGCCTGGATCAATGCAGCCACGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168824.9 |
||
| 3UTR-3UTR CAA 90 bp | GCCGTTCCTGTCCCCACCATGCTTCCCATACCCAGTGTTAGCAACATGAAGAAGGGCCAGACCACCAAGTaGCTAAATCCTTTGAACATC | + |
|
Preference number: 3 (lower is better) Translates to: AVPVPTMLPIPSVSNMKKGQTTK*LNPLNI Trigger: GATGTTCAAAGGATTTAGCAACTTGGTGGTCTGGCC...CTTCTTCATGTTGCTAACACTGGGTATGGGAAGCATGGTGGGGACAGGAACGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168824.9 |
||
| 3UTR TCA 72 bp | GCACTCCTCCATTCTCCTGGATGGACGGTGAGATGTTaGGTGTTTTCCTGTACCAGAAGTACTGTGTCGACG | + |
|
Preference number: 3 (lower is better) Translates to: ALLHSPGWTVRC*VFSCTRSTVST Trigger: CGTCGACACAGTACTTCTGGTACAGGAAAACACTCAACATCTCACCGTCCATCCAGGAGAATGGAGGAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163397.9 ENSMUST00000168824.9 |
||
| 3UTR TCA 72 bp | AAGTTTCTAGTAGCTGCCTCTTGGCTTCAGCCAGCTTaGGCTGCTGTAGTGCCCGAGCAGCTTATATGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: KFLVAASWLQPA*AAVVPEQLICH Trigger: ATGACATATAAGCTGCTCGGGCACTACAGCAGCTCAAGCTGGCTGAAGCCAAGAGGCAGCTACTAGAAACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR TCA 72 bp | GTGTTTGTGGAAAGCGGCTTGGCTTGGAAGACTCCATaGTGCAGAACTGGAGTCTTTACTGACCTGCTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: VFVESGLAWKTP*CRTGVFTDLLS Trigger: GGAAAGCAGGTCAGTAAAGACTCCAGTTCTGCATCATGGAGTCTTCCAAGCCAAGCCGCTTTCCACAAACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR CCA 72 bp | CATGGAAGAGGAGGAATAAAAGCTGTTGGGAAGTGGTaGTGCACACCTTTATTCCCAGCACTTGGGATGCAC | + |
|
Preference number: 3 (lower is better) Translates to: HGRGGIKAVGKW*CTPLFPALGMH Trigger: GTGCATCCCAAGTGCTGGGAATAAAGGTGTGCACCACCACTTCCCAACAGCTTTTATTCCTCCTCTTCCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR CCA 72 bp | CGTCATGGAAGAGGAGGAATAAAAGCTGTTGGGAAGTaGTGGTGCACACCTTTATTCCCAGCACTTGGGATG | + |
|
Preference number: 3 (lower is better) Translates to: RHGRGGIKAVGK*WCTPLFPALGM Trigger: CATCCCAAGTGCTGGGAATAAAGGTGTGCACCACCACTTCCCAACAGCTTTTATTCCTCCTCTTCCATGACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR CAA 90 bp | ACTGTGTCGACGAAGCCTTCTCACACTCCTCATCGTAGCCTGTGTGATTACTATAGCACCAATCTTCTCTaGCAGCACTTTAAGGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: TVSTKPSHTPHRSLCDYYSTNLL*QHFKGW Trigger: CCAGCCCTTAAAGTGCTGCAAGAGAAGATTGGTGCT...ATAGTAATCACACAGGCTACGATGAGGAGTGTGAGAAGGCTTCGTCGACACAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163397.9 ENSMUST00000168824.9 |
||
| 3UTR GCA 72 bp | AGACTCCATGATGCAGAACTGGAGTCTTTACTGACCTaGTTTCCACGTGAGCCCAAGGTCTTCTTAAAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: RLHDAELESLLT*FPREPKVFLKP Trigger: AGGCTTTAAGAAGACCTTGGGCTCACGTGGAAAGCAGGTCAGTAAAGACTCCAGTTCTGCATCATGGAGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR CAA 90 bp | AAAGATAGACTGAATTTGTGTTTGTGGAAAGCGGCTTGGCTTGGAAGACTCCATGTGTACCCTGCAGAGTaGGCTGCTTTTCTGCTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: KDRLNLCLWKAAWLGRLHVYPAE*AAFLLP Trigger: AGGGAGCAGAAAAGCAGCCAACTCTGCAGGGTACAC...ATGGAGTCTTCCAAGCCAAGCCGCTTTCCACAAACACAAATTCAGTCTATCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR GCA 72 bp | CTTGTACTAGATTTGATTCTCACTTGGGGTAGCAGTTaGTTTTCCATGCATGGCACTCTGGCTCTATCACCC | + |
|
Preference number: 3 (lower is better) Translates to: LVLDLILTWGSS*FSMHGTLALSP Trigger: GGGTGATAGAGCCAGAGTGCCATGCATGGAAAAGCAACTGCTACCCCAAGTGAGAATCAAATCTAGTACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR CCA 72 bp | ACTAGCACCAATCTTCTCTTGCAGCACTTTAAGGGCTaGGTAAGGCCAGACCACCAAGTTGCTAAATCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: TSTNLLLQHFKG*VRPDHQVAKSF Trigger: AAAGGATTTAGCAACTTGGTGGTCTGGCCTTACCCAGCCCTTAAAGTGCTGCAAGAGAAGATTGGTGCTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163397.9 ENSMUST00000168824.9 |
||
| 3UTR-3UTR CAA 90 bp | AATAAGCATAGTTTGTTCCAAAGATGGAACATTGAAGCCCAGCTGTGTCTACTGGAAGTAAGAGAGTGTTaGAACCCAGGCTGGCATCGG | + |
|
Preference number: 3 (lower is better) Translates to: NKHSLFQRWNIEAQLCLLEVREC*NPGWHR Trigger: CCGATGCCAGCCTGGGTTCAAACACTCTCTTACTTC...CAGTAGACACAGCTGGGCTTCAATGTTCCATCTTTGGAACAAACTATGCTTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR CAA 90 bp | TACCCACTGAGTCATCTTACTAGCACCAATCTTCTCTTGCAGCACTTTAAGGGCAAGTTGCTAAATCCTTaGAACATCCCTCCTGAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: YPLSHLTSTNLLLQHFKGKLLNP*NIPPEC Trigger: GCACTCAGGAGGGATGTTCAAAGGATTTAGCAACTT...GCCCTTAAAGTGCTGCAAGAGAAGATTGGTGCTAGTAAGATGACTCAGTGGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163397.9 ENSMUST00000168824.9 |
||
| 3UTR-3UTR CAA 90 bp | AATAAGCATAGTTTGTTCCAAAGATGGAACATTGAAGCCCAGCTGTGTCTACTGCTCCCTAGCTATACTTaGGCTCTCACAACAGTGACG | + |
|
Preference number: 3 (lower is better) Translates to: NKHSLFQRWNIEAQLCLLLPSYT*ALTTVT Trigger: CGTCACTGTTGTGAGAGCCAAAGTATAGCTAGGGAG...CAGTAGACACAGCTGGGCTTCAATGTTCCATCTTTGGAACAAACTATGCTTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR CAA 90 bp | AAAGATAGACTGAATTTGTGTTTGTGGAAAGCGGCTTGGCTTGGAAGACTCCATTCCAAAGATGGAACATaGAAGCCCAGCTGTGTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: KDRLNLCLWKAAWLGRLHSKDGT*KPSCVY Trigger: GTAGACACAGCTGGGCTTCAATGTTCCATCTTTGGA...ATGGAGTCTTCCAAGCCAAGCCGCTTTCCACAAACACAAATTCAGTCTATCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR TCA 72 bp | TGTGGTTTTGGGCTGGGTGATGTCTTAGAATTGATCTaGTATTACCGCTTTGATGATCTCGTTACCGTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: CGFGLGDVLELI*YYRFDDLVTVG Trigger: CCCAACGGTAACGAGATCATCAAAGCGGTAATATCAGATCAATTCTAAGACATCACCCAGCCCAAAACCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR CCA 72 bp | AAAGATAGACTGAATTTGTGTTTGTGGAAAGCGGCTTaGCTTGGAAGACTCCATGATGCAGAACTGGAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: KDRLNLCLWKAA*LGRLHDAELES Trigger: AGACTCCAGTTCTGCATCATGGAGTCTTCCAAGCCAAGCCGCTTTCCACAAACACAAATTCAGTCTATCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR CAA 90 bp | TATTATTGGTTCCTCATTGAGACATGCAGGCCTCAGAGAAGGTCTTGTACTAGACAGGTAACTGTAAGGTaGAATTTGCTCCTGGCATCT | + |
|
Preference number: 3 (lower is better) Translates to: YYWFLIETCRPQRRSCTRQVTVR*NLLLAS Trigger: AGATGCCAGGAGCAAATTCAACCTTACAGTTACCTG...TCTAGTACAAGACCTTCTCTGAGGCCTGCATGTCTCAATGAGGAACCAATAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR CAA 90 bp | AATAAGCATAGTTTGTTCCAAAGATGGAACATTGAAGCCCAGCTGTGTCTACTGCCTGTAGTACTCATTTaGGACAAGTCTAGGGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: NKHSLFQRWNIEAQLCLLPVVLI*DKSRAV Trigger: CACTGCCCTAGACTTGTCCAAAATGAGTACTACAGG...CAGTAGACACAGCTGGGCTTCAATGTTCCATCTTTGGAACAAACTATGCTTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR TCA 72 bp | CCCTGTCAAGGTTTATGTTGGCTGTCAATAAGTGTCTaGAATTTAGTGCTTCCAGGTAGCCATAGTTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: PCQGLCWLSISV*NLVLPGSHSSP Trigger: TGGAGAACTATGGCTACCTGGAAGCACTAAATTTCAGACACTTATTGACAGCCAACATAAACCTTGACAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR CCA 72 bp | ATAATTAATGTTCTAAAACGTATATACCTGGCCTGGTaGCACATGACCTGTTGTGCTAGTATGGGGAGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: IINVLKRIYLAW*HMTCCASMGRL Trigger: TAGCCTCCCCATACTAGCACAACAGGTCATGTGCCACCAGGCCAGGTATATACGTTTTAGAACATTAATTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR CAA 90 bp | ATAAGCATAGTTTGTTCCAAAGATGGAACATTGAAGCCCAGCTGTGTCTACTGTTCAGCAAGAACCAGATaGCAAAGTCCCAGTCTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: ISIVCSKDGTLKPSCVYCSARTR*QSPSLK Trigger: CTTAAGACTGGGACTTTGCAATCTGGTTCTTGCTGA...ACAGTAGACACAGCTGGGCTTCAATGTTCCATCTTTGGAACAAACTATGCTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR CAA 90 bp | TATTATTGGTTCCTCATTGAGACATGCAGGCCTCAGAGAAGGTCTTGTACTAGATTCCAAGGACAAGTTTaGACAGTTGTCACTTCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: YYWFLIETCRPQRRSCTRFQGQV*TVVTSG Trigger: ACCTGAAGTGACAACTGTCAAAACTTGTCCTTGGAA...TCTAGTACAAGACCTTCTCTGAGGCCTGCATGTCTCAATGAGGAACCAATAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR CAA 90 bp | TATTATTGGTTCCTCATTGAGACATGCAGGCCTCAGAGAAGGTCTTGTACTAGATCAAAGAGATACAGGTaGCAGGGTGATAAGGAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: YYWFLIETCRPQRRSCTRSKRYR*QGDKEV Trigger: TACTTCCTTATCACCCTGCAACCTGTATCTCTTTGA...TCTAGTACAAGACCTTCTCTGAGGCCTGCATGTCTCAATGAGGAACCAATAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR CAA 90 bp | ATAAGCATAGTTTGTTCCAAAGATGGAACATTGAAGCCCAGCTGTGTCTACTGTCCCCACATCTCTATTTaGTATTGTTTGGTCTACAGC | + |
|
Preference number: 3 (lower is better) Translates to: ISIVCSKDGTLKPSCVYCPHISI*YCLVYS Trigger: GCTGTAGACCAAACAATACAAAATAGAGATGTGGGG...ACAGTAGACACAGCTGGGCTTCAATGTTCCATCTTTGGAACAAACTATGCTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR CAA 90 bp | TATTATTGGTTCCTCATTGAGACATGCAGGCCTCAGAGAAGGTCTTGTACTAGACGTCATCCCACACAGTaGTTCTTAATAGTAAAATCA | + |
|
Preference number: 3 (lower is better) Translates to: YYWFLIETCRPQRRSCTRRHPTQ*FLIVKS Trigger: TGATTTTACTATTAAGAACAACTGTGTGGGATGACG...TCTAGTACAAGACCTTCTCTGAGGCCTGCATGTCTCAATGAGGAACCAATAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR CAA 90 bp | TATTATTGGTTCCTCATTGAGACATGCAGGCCTCAGAGAAGGTCTTGTACTAGAATTCTCAATTTAGAGTaGAACTGTGCACACACATCA | + |
|
Preference number: 3 (lower is better) Translates to: YYWFLIETCRPQRRSCTRILNLE*NCAHTS Trigger: TGATGTGTGTGCACAGTTCAACTCTAAATTGAGAAT...TCTAGTACAAGACCTTCTCTGAGGCCTGCATGTCTCAATGAGGAACCAATAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR-3UTR CAA 90 bp | ATAAGCATAGTTTGTTCCAAAGATGGAACATTGAAGCCCAGCTGTGTCTACTGTCTAGGGCAGTGTGAGTaGAAAATCAAAACTCTGATT | + |
|
Preference number: 3 (lower is better) Translates to: ISIVCSKDGTLKPSCVYCLGQCE*KIKTLI Trigger: AATCAGAGTTTTGATTTTCAACTCACACTGCCCTAG...ACAGTAGACACAGCTGGGCTTCAATGTTCCATCTTTGGAACAAACTATGCTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR CCA 72 bp | AGCTGTGTCTACTGTAATATATTACTCAAAAGCTACTaGGCGTTTTACAGTAAGCACTTCATGTCAACAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SCVYCNILLKSY*AFYSKHFMSTA Trigger: AGCTGTTGACATGAAGTGCTTACTGTAAAACGCCCAGTAGCTTTTGAGTAATATATTACAGTAGACACAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| CDS-3UTR TCA 90 bp | GGCACAGCGCTGGCTCCCACTGCACTCCTCCATTCTCCTGGATGGACGGTGAGAGGTCTTCCTGGGTGCTaGCCAGGTCCTCCAGCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GTALAPTALLHSPGWTVRGLPGC*PGPPAP Trigger: AGGCGCTGGAGGACCTGGTCAGCACCCAGGAAGACC...TCTCACCGTCCATCCAGGAGAATGGAGGAGTGCAGTGGGAGCCAGCGCTGTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163397.9 ENSMUST00000168824.9 |
||
| CDS-3UTR CCA 90 bp | CAGGCCAGGGTGAGGCACAGCGCTGGCTCCCACTGCACTCCTCCATTCTCCTGGTCCACAACCCCAGGGTaGGCACACTCTGTTGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: QARVRHSAGSHCTPPFSWSTTPG*AHSVDL Trigger: GAGGTCAACAGAGTGTGCCCACCCTGGGGTTGTGGA...CCAGGAGAATGGAGGAGTGCAGTGGGAGCCAGCGCTGTGCCTCACCCTGGCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163397.9 ENSMUST00000168824.9 |
||
| CDS-3UTR TCA 90 bp | GACGATGAGCAGTGGACTCACAAACGCCCACATGACCTTCCAGTACCAGCTGAGGGTCTTCCTGGGTGCTaGCCAGGTCCTCCAGCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DDEQWTHKRPHDLPVPAEGLPGC*PGPPAP Trigger: AGGCGCTGGAGGACCTGGTCAGCACCCAGGAAGACC...CTCAGCTGGTACTGGAAGGTCATGTGGGCGTTTGTGAGTCCACTGCTCATCGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168824.9 |
||
| CDS-3UTR GCA 90 bp | CTATTCAGTGGGCAGACAGACCACGGCAGGGGATCCGACACCACTGAGGTAGGGGGAAGCGCCATACATTaGCCAGGCCCACAGCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFSGQTDHGRGSDTTEVGGSAIH*PGPQHR Trigger: CCTATGCTGTGGGCCTGGGCAATGTATGGCGCTTCC...CCCTACCTCAGTGGTGTCGGATCCCCTGCCGTGGTCTGTCTGCCCACTGAATAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163397.9 |
||
| CDS-3UTR GCA 90 bp | ACGATGAGCAGTGGACTCACAAACGCCCACATGACCTTCCAGTACCAGCTGAGGGGAAGCGCCATACATTaGCCAGGCCCACAGCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: TMSSGLTNAHMTFQYQLRGSAIH*PGPQHR Trigger: CCTATGCTGTGGGCCTGGGCAATGTATGGCGCTTCC...CCTCAGCTGGTACTGGAAGGTCATGTGGGCGTTTGTGAGTCCACTGCTCATCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168824.9 |
||
| 3UTR CAA 72 bp | TGCTCAATCTTAGGTGTGAACATGTATGCCAGGCCATaGGTGGCTCCATGGAGTGTGAGGCCCCGGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CSILGVNMYARP*VAPWSVRPRTR Trigger: CCTGGTCCGGGGCCTCACACTCCATGGAGCCACCAATGGCCTGGCATACATGTTCACACCTAAGATTGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168824.9 |
||
| 3UTR CAA 72 bp | CTTAGTCACCACGTGGCCCTGAGTAGCATCCCAGGCTaGGTACTGCAGCGTTCCCGTGAGGATGTAGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: LSHHVALSSIPG*VLQRSREDVVT Trigger: AGTGACTACATCCTCACGGGAACGCTGCAGTACCAAGCCTGGGATGCTACTCAGGGCCACGTGGTGACTAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168824.9 |
||
| CDS-3UTR CCA 90 bp | ACTCCTCATCGTAGCCTGTGTGATTACTATTCAGTGGGCAGACAGACCACGGCATCCACAACCCCAGGGTaGGCACACTCTGTTGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: TPHRSLCDYYSVGRQTTASTTPG*AHSVDL Trigger: GAGGTCAACAGAGTGTGCCCACCCTGGGGTTGTGGA...TGCCGTGGTCTGTCTGCCCACTGAATAGTAATCACACAGGCTACGATGAGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163397.9 ENSMUST00000168824.9 |
||
| 3UTR CAA 72 bp | CCAGCCTCCATGGTGAACACCATGCCAATGGCACAGTaGAGGAGGCATACCAAACCTGAAATGGCCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PASMVNTMPMAQ*RRHTKPEMASL Trigger: CAAGGAGGCCATTTCAGGTTTGGTATGCCTCCTCAACTGTGCCATTGGCATGGTGTTCACCATGGAGGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168824.9 |
||
| CDS-3UTR TCA 90 bp | TGTTTTCCTGTACCAGAAGTACTGTGTCGACGAAGCCTTCTCACACTCCTCATCGTGGGCACACTCTGTTaGCCTCGGTCTTCCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CFPVPEVLCRRSLLTLLIVGTLC*PRSSWV Trigger: CACCCAGGAAGACCGAGGTCAACAGAGTGTGCCCAC...GATGAGGAGTGTGAGAAGGCTTCGTCGACACAGTACTTCTGGTACAGGAAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163397.9 ENSMUST00000168824.9 |
||
| CDS-3UTR CCA 90 bp | ACTGTGTCGACGAAGCCTTCTCACACTCCTCATCGTAGCCTGTGTGATTACTATGGGGTTGTCCCACTTTaGCCGCACCTTCTCCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: TVSTKPSHTPHRSLCDYYGVVPL*PHLLHN Trigger: GTTGTGGAGAAGGTGCGGCCAAAGTGGGACAACCCC...ATAGTAATCACACAGGCTACGATGAGGAGTGTGAGAAGGCTTCGTCGACACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163397.9 ENSMUST00000168824.9 |
||
| CDS-3UTR TCA 90 bp | AATAAGCATAGTTTGTTCCAAAGATGGAACATTGAAGCCCAGCTGTGTCTACTGGGTCTTCCTGGGTGCTaGCCAGGTCCTCCAGCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NKHSLFQRWNIEAQLCLLGLPGC*PGPPAP Trigger: AGGCGCTGGAGGACCTGGTCAGCACCCAGGAAGACC...CAGTAGACACAGCTGGGCTTCAATGTTCCATCTTTGGAACAAACTATGCTTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR CAA 72 bp | TTCAAGAAATACTGGATGGGTGAAGTAAGAGAGTGTTaGAACCCAGGCTGGCATCGGCTGCTCCCTCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FKKYWMGEVREC*NPGWHRLLPPH Trigger: ATGGGGAGGGAGCAGCCGATGCCAGCCTGGGTTCAAACACTCTCTTACTTCACCCATCCAGTATTTCTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR CAA 72 bp | GAAGTTTCTAGTAGCTGCCTCTTGGCTTCAGCCAGCTaGAGCTGCTGTAGTGCCCGAGCAGCTTATATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: EVSSSCLLASAS*SCCSARAAYMS Trigger: TGACATATAAGCTGCTCGGGCACTACAGCAGCTCAAGCTGGCTGAAGCCAAGAGGCAGCTACTAGAAACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| CDS-3UTR TCA 90 bp | AAAGATAGACTGAATTTGTGTTTGTGGAAAGCGGCTTGGCTTGGAAGACTCCATGTGGGCACACTCTGTTaGCCTCGGTCTTCCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KDRLNLCLWKAAWLGRLHVGTLC*PRSSWV Trigger: CACCCAGGAAGACCGAGGTCAACAGAGTGTGCCCAC...ATGGAGTCTTCCAAGCCAAGCCGCTTTCCACAAACACAAATTCAGTCTATCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| CDS-3UTR TCA 90 bp | TATTATTGGTTCCTCATTGAGACATGCAGGCCTCAGAGAAGGTCTTGTACTAGATCTGCGTGGCTGCATTaGTCCAGGCCTTGGGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: YYWFLIETCRPQRRSCTRSAWLH*SRPWGW Trigger: CCAACCCCAAGGCCTGGATCAATGCAGCCACGCAGA...TCTAGTACAAGACCTTCTCTGAGGCCTGCATGTCTCAATGAGGAACCAATAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| CDS-3UTR TCA 90 bp | AAAGATAGACTGAATTTGTGTTTGTGGAAAGCGGCTTGGCTTGGAAGACTCCATTGTCAGTCAGAGGGGTaGGGATGGCCGTTCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KDRLNLCLWKAAWLGRLHCQSEG*GWPFLS Trigger: GGACAGGAACGGCCATCCTCACCCCTCTGACTGACA...ATGGAGTCTTCCAAGCCAAGCCGCTTTCCACAAACACAAATTCAGTCTATCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| CDS-3UTR TCA 90 bp | AATAAGCATAGTTTGTTCCAAAGATGGAACATTGAAGCCCAGCTGTGTCTACTGCCTTCCAGTACCAGCTaGGGGTGCGGCCAGTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: NKHSLFQRWNIEAQLCLLPSSTS*GCGQSW Trigger: CCATGACTGGCCGCACCCTCAGCTGGTACTGGAAGG...CAGTAGACACAGCTGGGCTTCAATGTTCCATCTTTGGAACAAACTATGCTTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| CDS-3UTR CCA 90 bp | ATAAGCATAGTTTGTTCCAAAGATGGAACATTGAAGCCCAGCTGTGTCTACTGTCCATTGGTGGCTCCATaGAGTGTGAGGCCCCGGACC | + |
|
Preference number: 4 (lower is better) Translates to: ISIVCSKDGTLKPSCVYCPLVAP*SVRPRT Trigger: GGTCCGGGGCCTCACACTCCATGGAGCCACCAATGG...ACAGTAGACACAGCTGGGCTTCAATGTTCCATCTTTGGAACAAACTATGCTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR CAA 72 bp | GCAGAGTTGGCTGCTTTTCTGCTCCCTAGCTATACTTaGGCTCTCACAACAGTGACGCTAACTTCTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AELAAFLLPSYT*ALTTVTLTSLG Trigger: CCCAAGAGAAGTTAGCGTCACTGTTGTGAGAGCCAAAGTATAGCTAGGGAGCAGAAAAGCAGCCAACTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR CAA 72 bp | GATCTAGAGTCATTTGAAGTTTCTAGTAGCTGCCTCTaGGCTTCAGCCAGCTTGAGCTGCTGTAGTGCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: DLESFEVSSSCL*ASASLSCCSAR Trigger: TCGGGCACTACAGCAGCTCAAGCTGGCTGAAGCCAAGAGGCAGCTACTAGAAACTTCAAATGACTCTAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| 3UTR CAA 72 bp | AAGATCTGCGTGGCTGCATTGATCCAGGCCTTGGGGTaGGCTAGCTGCTCAATCTTAGGTGTGAACATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KICVAALIQALG*ASCSILGVNMY Trigger: ATACATGTTCACACCTAAGATTGAGCAGCTAGCCAACCCCAAGGCCTGGATCAATGCAGCCACGCAGATCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168824.9 |
||
| CDS-3UTR GCA 90 bp | AAAGATAGACTGAATTTGTGTTTGTGGAAAGCGGCTTGGCTTGGAAGACTCCATGGAAGCGCCATACATTaGCCAGGCCCACAGCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: KDRLNLCLWKAAWLGRLHGSAIH*PGPQHR Trigger: CCTATGCTGTGGGCCTGGGCAATGTATGGCGCTTCC...ATGGAGTCTTCCAAGCCAAGCCGCTTTCCACAAACACAAATTCAGTCTATCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| CDS-3UTR GCA 90 bp | AAAGATAGACTGAATTTGTGTTTGTGGAAAGCGGCTTGGCTTGGAAGACTCCATTCCCAGGCTTGGTACTaGAGCGTTCCCGTGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: KDRLNLCLWKAAWLGRLHSQAWY*SVPVRM Trigger: CATCCTCACGGGAACGCTGCAGTACCAAGCCTGGGA...ATGGAGTCTTCCAAGCCAAGCCGCTTTCCACAAACACAAATTCAGTCTATCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| CDS-3UTR CCA 90 bp | AAAGATAGACTGAATTTGTGTTTGTGGAAAGCGGCTTGGCTTGGAAGACTCCATTCCACAACCCCAGGGTaGGCACACTCTGTTGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: KDRLNLCLWKAAWLGRLHSTTPG*AHSVDL Trigger: GAGGTCAACAGAGTGTGCCCACCCTGGGGTTGTGGA...ATGGAGTCTTCCAAGCCAAGCCGCTTTCCACAAACACAAATTCAGTCTATCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| CDS-3UTR CCA 90 bp | CTCAGAGAAGGTCTTGTACTAGATTTGATTCTCACTTGGGGTAGCAGTTGCTTTGGGGTTGTCCCACTTTaGCCGCACCTTCTCCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: LREGLVLDLILTWGSSCFGVVPL*PHLLHN Trigger: GTTGTGGAGAAGGTGCGGCCAAAGTGGGACAACCCC...AAAGCAACTGCTACCCCAAGTGAGAATCAAATCTAGTACAAGACCTTCTCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| CDS-3UTR TCA 90 bp | CTCAGAGAAGGTCTTGTACTAGATTTGATTCTCACTTGGGGTAGCAGTTGCTTTGAGGCATACCAAACCTaGAATGGCCTCCTTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LREGLVLDLILTWGSSCFEAYQT*NGLLGQ Trigger: CTGCCCAAGGAGGCCATTTCAGGTTTGGTATGCCTC...AAAGCAACTGCTACCCCAAGTGAGAATCAAATCTAGTACAAGACCTTCTCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| CDS-3UTR TCA 90 bp | TATTATTGGTTCCTCATTGAGACATGCAGGCCTCAGAGAAGGTCTTGTACTAGATCTCTACCAGCACAATaGGCAGCAGAGACAGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YYWFLIETCRPQRRSCTRSLPAQ*AAETAW Trigger: CCACGCTGTCTCTGCTGCTCATTGTGCTGGTAGAGA...TCTAGTACAAGACCTTCTCTGAGGCCTGCATGTCTCAATGAGGAACCAATAATA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| CDS-3UTR CCA 90 bp | CTCAGAGAAGGTCTTGTACTAGATTTGATTCTCACTTGGGGTAGCAGTTGCTTTGCTTCTGGCAGTCGTTaGAGGGTTCGTTGTAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LREGLVLDLILTWGSSCFASGSR*RVRCSW Trigger: CCAGCTACAACGAACCCTCCAACGACTGCCAGAAGC...AAAGCAACTGCTACCCCAAGTGAGAATCAAATCTAGTACAAGACCTTCTCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| CDS-3UTR CCA 90 bp | ATAAGCATAGTTTGTTCCAAAGATGGAACATTGAAGCCCAGCTGTGTCTACTGTGTAGCATCCCAGGCTTaGTACTGCAGCGTTCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: ISIVCSKDGTLKPSCVYCVASQA*YCSVPV Trigger: CACGGGAACGCTGCAGTACCAAGCCTGGGATGCTAC...ACAGTAGACACAGCTGGGCTTCAATGTTCCATCTTTGGAACAAACTATGCTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| CDS-3UTR CCA 90 bp | AATAAGCATAGTTTGTTCCAAAGATGGAACATTGAAGCCCAGCTGTGTCTACTGGAGGGATGCACATGGTaGAGGAGGCTACCAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NKHSLFQRWNIEAQLCLLEGCTW*RRLPEA Trigger: GGCTTCTGGTAGCCTCCTCCACCATGTGCATCCCTC...CAGTAGACACAGCTGGGCTTCAATGTTCCATCTTTGGAACAAACTATGCTTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| CDS-3UTR CCA 90 bp | AAAGATAGACTGAATTTGTGTTTGTGGAAAGCGGCTTGGCTTGGAAGACTCCATCCAGAGGGATGCACATaGTGGAGGAGGCTACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KDRLNLCLWKAAWLGRLHPEGCT*WRRLPE Trigger: TTCTGGTAGCCTCCTCCACCATGTGCATCCCTCTGG...ATGGAGTCTTCCAAGCCAAGCCGCTTTCCACAAACACAAATTCAGTCTATCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| CDS-3UTR TCA 90 bp | AAAGATAGACTGAATTTGTGTTTGTGGAAAGCGGCTTGGCTTGGAAGACTCCATAGCCGTGTCCAGCTCTaGTTCCAAGCTGCAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KDRLNLCLWKAAWLGRLHSRVQL*FQAAVS Trigger: AGAAACTGCAGCTTGGAATCAGAGCTGGACACGGCT...ATGGAGTCTTCCAAGCCAAGCCGCTTTCCACAAACACAAATTCAGTCTATCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| CDS-3UTR TCA 90 bp | TATTATTGGTTCCTCATTGAGACATGCAGGCCTCAGAGAAGGTCTTGTACTAGAGCAGGTAGCTGGAGATaGTCTTGCTGTCAGTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: YYWFLIETCRPQRRSCTRAGSWR*SCCQSE Trigger: CTCTGACTGACAGCAAGATCATCTCCAGCTACCTGC...TCTAGTACAAGACCTTCTCTGAGGCCTGCATGTCTCAATGAGGAACCAATAATA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
||
| CDS-3UTR TCA 90 bp | AAAGATAGACTGAATTTGTGTTTGTGGAAAGCGGCTTGGCTTGGAAGACTCCATTGCCAATGGCACAGTTaGGGAGGCATACCAAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: KDRLNLCLWKAAWLGRLHCQWHS*GGIPNL Trigger: CAGGTTTGGTATGCCTCCTCAACTGTGCCATTGGCA...ATGGAGTCTTCCAAGCCAAGCCGCTTTCCACAAACACAAATTCAGTCTATCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| CDS-3UTR GCA 90 bp | CTCAGAGAAGGTCTTGTACTAGATTTGATTCTCACTTGGGGTAGCAGTTGCTTTAGGTGTGAACATGTATaGCAGGCCATTGGTGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LREGLVLDLILTWGSSCFRCEHV*QAIGGS Trigger: GGAGCCACCAATGGCCTGGCATACATGTTCACACCT...AAAGCAACTGCTACCCCAAGTGAGAATCAAATCTAGTACAAGACCTTCTCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| CDS-3UTR GCA 90 bp | AAAGATAGACTGAATTTGTGTTTGTGGAAAGCGGCTTGGCTTGGAAGACTCCATGACACAATGAGGGCATaGTTCTGGCAGTCGTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: KDRLNLCLWKAAWLGRLHDTMRA*FWQSLE Trigger: CTCCAACGACTGCCAGAAGCATGCCCTCATTGTGTC...ATGGAGTCTTCCAAGCCAAGCCGCTTTCCACAAACACAAATTCAGTCTATCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| CDS-3UTR CCA 90 bp | CTCAGAGAAGGTCTTGTACTAGATTTGATTCTCACTTGGGGTAGCAGTTGCTTTGGATCCTGGAAGGAGTaGAAGAGGTACCAAAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: LREGLVLDLILTWGSSCFGSWKE*KRYQRA Trigger: GGCTCTTTGGTACCTCTTCCACTCCTTCCAGGATCC...AAAGCAACTGCTACCCCAAGTGAGAATCAAATCTAGTACAAGACCTTCTCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| CDS-3UTR CCA 90 bp | AATAAGCATAGTTTGTTCCAAAGATGGAACATTGAAGCCCAGCTGTGTCTACTGATGAGGGCATGCTTCTaGCAGTCGTTGGAGGGTTCG | + |
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Preference number: 4 (lower is better) Translates to: NKHSLFQRWNIEAQLCLLMRACF*QSLEGS Trigger: CGAACCCTCCAACGACTGCCAGAAGCATGCCCTCAT...CAGTAGACACAGCTGGGCTTCAATGTTCCATCTTTGGAACAAACTATGCTTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| CDS-3UTR TCA 90 bp | TATTATTGGTTCCTCATTGAGACATGCAGGCCTCAGAGAAGGTCTTGTACTAGAGAAGAAGTAGAGCACTaGCCAGAGCTGGGAAACTTC | + |
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Preference number: 4 (lower is better) Translates to: YYWFLIETCRPQRRSCTREEVEH*PELGNF Trigger: GAAGTTTCCCAGCTCTGGTCAGTGCTCTACTTCTTC...TCTAGTACAAGACCTTCTCTGAGGCCTGCATGTCTCAATGAGGAACCAATAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| CDS-3UTR CCA 90 bp | AAAGATAGACTGAATTTGTGTTTGTGGAAAGCGGCTTGGCTTGGAAGACTCCATGTGATTACTATTCAGTaGGCAGACAGACCACGGCAG | + |
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Preference number: 4 (lower is better) Translates to: KDRLNLCLWKAAWLGRLHVITIQ*ADRPRQ Trigger: CTGCCGTGGTCTGTCTGCCCACTGAATAGTAATCAC...ATGGAGTCTTCCAAGCCAAGCCGCTTTCCACAAACACAAATTCAGTCTATCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| 3UTR CAA 72 bp | TCCCAGACTGGTCCAGAAAGAAAAGATAGACTGAATTaGTGTTTGTGGAAAGCGGCTTGGCTTGGAAGACTC | + |
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Preference number: 4 (lower is better) Translates to: SQTGPERKDRLN*CLWKAAWLGRL Trigger: GAGTCTTCCAAGCCAAGCCGCTTTCCACAAACACAAATTCAGTCTATCTTTTCTTTCTGGACCAGTCTGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| CDS-3UTR TCA 90 bp | CTCAGAGAAGGTCTTGTACTAGATTTGATTCTCACTTGGGGTAGCAGTTGCTTTTGGACGGTGAGATGTTaGGTGTTTTCCTGTACCAGA | + |
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Preference number: 4 (lower is better) Translates to: LREGLVLDLILTWGSSCFWTVRC*VFSCTR Trigger: TCTGGTACAGGAAAACACTCAACATCTCACCGTCCA...AAAGCAACTGCTACCCCAAGTGAGAATCAAATCTAGTACAAGACCTTCTCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| CDS-3UTR TCA 90 bp | TATTATTGGTTCCTCATTGAGACATGCAGGCCTCAGAGAAGGTCTTGTACTAGACCAGTGTTAGCAACATaGAGAAGTAGAGCACTGACC | + |
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Preference number: 4 (lower is better) Translates to: YYWFLIETCRPQRRSCTRPVLAT*RSRALT Trigger: GGTCAGTGCTCTACTTCTTCATGTTGCTAACACTGG...TCTAGTACAAGACCTTCTCTGAGGCCTGCATGTCTCAATGAGGAACCAATAATA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| CDS-3UTR CCA 90 bp | ATAAGCATAGTTTGTTCCAAAGATGGAACATTGAAGCCCAGCTGTGTCTACTGTAGGGTTCGTTGTAGCTaGCAAAAGCAATCAGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: ISIVCSKDGTLKPSCVYCRVRCS*QKQSGH Trigger: GTGGCCTGATTGCTTTTGCCAGCTACAACGAACCCT...ACAGTAGACACAGCTGGGCTTCAATGTTCCATCTTTGGAACAAACTATGCTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| 3UTR CAA 72 bp | TGGCACTCTGGCTCTATCACCCTGTCAAGGTTTATGTaGGCTGTCAATAAGTGTCTGAAATTTAGTGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: WHSGSITLSRFM*AVNKCLKFSAS Trigger: GGAAGCACTAAATTTCAGACACTTATTGACAGCCAACATAAACCTTGACAGGGTGATAGAGCCAGAGTGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| 3UTR CAA 72 bp | TGTATTTTCTTCTGTGCTCGCTTCCAAGGACAAGTTTaGACAGTTGTCACTTCAGGTCTCATTCTATCCATG | + |
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Preference number: 4 (lower is better) Translates to: CIFFCARFQGQV*TVVTSGLILSM Trigger: CATGGATAGAATGAGACCTGAAGTGACAACTGTCAAAACTTGTCCTTGGAAGCGAGCACAGAAGAAAATACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| CDS-3UTR TCA 90 bp | TATTATTGGTTCCTCATTGAGACATGCAGGCCTCAGAGAAGGTCTTGTACTAGATGGCTGTATAGTCATTaGATAGGTCAAACCAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: YYWFLIETCRPQRRSCTRWLYSH*IGQTSS Trigger: ACTACTGGTTTGACCTATTCAATGACTATACAGCCA...TCTAGTACAAGACCTTCTCTGAGGCCTGCATGTCTCAATGAGGAACCAATAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| CDS TCA 90 bp | ACCCCAGGGTGGGCACACTCTGTTGACCTCGGTCTTCCTGGGTGCTaGCCAGGTCCTCCAGCGCCTCCCCAGGGCTGGAGCTCCTCATCC | + |
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Preference number: 5 (lower is better) Translates to: TPGWAHSVDLGLPGC*PGPPAPPQGWSSSS Trigger: GGATGAGGAGCTCCAGCCCTGGGGAGGCGCTGGAGGACCTGGTCAGCACCCAGGAAGACCGAGGTCAACAGAGTGTGCCCACCCTGGGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026273.11 ENSMUST00000163397.9 ENSMUST00000168824.9 |
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| CDS TCA 90 bp | CTTTGGCCGCACCTTCTCCACAACCCCAGGGTGGGCACACTCTGTTaGCCTCGGTCTTCCTGGGTGCTGACCAGGTCCTCCAGCGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: LWPHLLHNPRVGTLC*PRSSWVLTRSSSAS Trigger: GGAGGCGCTGGAGGACCTGGTCAGCACCCAGGAAGACCGAGGTCAACAGAGTGTGCCCACCCTGGGGTTGTGGAGAAGGTGCGGCCAAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026273.11 ENSMUST00000163397.9 ENSMUST00000168824.9 |
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| CDS-3UTR CAA 90 bp | CAGCCAGGCCAGGGTGAGGCACAGCGCTGGCTCCCACTGCACTCCTCCATTCTCGGTGGGCACACTCTGTaGACCTCGGTCTTCCTGGGT | + |
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Preference number: 5 (lower is better) Translates to: QPGQGEAQRWLPLHSSILGGHTL*TSVFLG Trigger: ACCCAGGAAGACCGAGGTCAACAGAGTGTGCCCACC...GAGAATGGAGGAGTGCAGTGGGAGCCAGCGCTGTGCCTCACCCTGGCCTGGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163397.9 ENSMUST00000168824.9 |
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| CDS-3UTR CAA 90 bp | GGGCATGCTTCTGGCAGTCGTTGGAGGGTTCGTTGTAGCTGGCAAAAGCAATCAGGTGGGCACACTCTGTaGACCTCGGTCTTCCTGGGT | + |
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Preference number: 5 (lower is better) Translates to: GHASGSRWRVRCSWQKQSGGHTL*TSVFLG Trigger: ACCCAGGAAGACCGAGGTCAACAGAGTGTGCCCACC...TGATTGCTTTTGCCAGCTACAACGAACCCTCCAACGACTGCCAGAAGCATGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168824.9 |
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| CDS-3UTR CAA 90 bp | TATTATTGGTTCCTCATTGAGACATGCAGGCCTCAGAGAAGGTCTTGTACTAGAGGTGGGCACACTCTGTaGACCTCGGTCTTCCTGGGT | + |
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Preference number: 5 (lower is better) Translates to: YYWFLIETCRPQRRSCTRGGHTL*TSVFLG Trigger: ACCCAGGAAGACCGAGGTCAACAGAGTGTGCCCACC...TCTAGTACAAGACCTTCTCTGAGGCCTGCATGTCTCAATGAGGAACCAATAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| CDS-3UTR CAA 90 bp | CTCAGAGAAGGTCTTGTACTAGATTTGATTCTCACTTGGGGTAGCAGTTGCTTTGCATTGATCCAGGCCTaGGGGTTGGCTAGCTGCTCA | + |
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Preference number: 5 (lower is better) Translates to: LREGLVLDLILTWGSSCFALIQA*GLASCS Trigger: TGAGCAGCTAGCCAACCCCAAGGCCTGGATCAATGC...AAAGCAACTGCTACCCCAAGTGAGAATCAAATCTAGTACAAGACCTTCTCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| CDS-3UTR CAA 90 bp | CTCAGAGAAGGTCTTGTACTAGATTTGATTCTCACTTGGGGTAGCAGTTGCTTTATGTATGCCAGGCCATaGGTGGCTCCATGGAGTGTG | + |
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Preference number: 5 (lower is better) Translates to: LREGLVLDLILTWGSSCFMYARP*VAPWSV Trigger: CACACTCCATGGAGCCACCAATGGCCTGGCATACAT...AAAGCAACTGCTACCCCAAGTGAGAATCAAATCTAGTACAAGACCTTCTCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| CDS-3UTR CAA 90 bp | AAAGATAGACTGAATTTGTGTTTGTGGAAAGCGGCTTGGCTTGGAAGACTCCATATCCAGGCCTTGGGGTaGGCTAGCTGCTCAATCTTA | + |
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Preference number: 5 (lower is better) Translates to: KDRLNLCLWKAAWLGRLHIQALG*ASCSIL Trigger: TAAGATTGAGCAGCTAGCCAACCCCAAGGCCTGGAT...ATGGAGTCTTCCAAGCCAAGCCGCTTTCCACAAACACAAATTCAGTCTATCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| CDS-3UTR CAA 90 bp | ATAAGCATAGTTTGTTCCAAAGATGGAACATTGAAGCCCAGCTGTGTCTACTGTATGCCAATGGCACAGTaGAGGAGGCATACCAAACCT | + |
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Preference number: 5 (lower is better) Translates to: ISIVCSKDGTLKPSCVYCMPMAQ*RRHTKP Trigger: AGGTTTGGTATGCCTCCTCAACTGTGCCATTGGCAT...ACAGTAGACACAGCTGGGCTTCAATGTTCCATCTTTGGAACAAACTATGCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| CDS-3UTR CAA 90 bp | TATTATTGGTTCCTCATTGAGACATGCAGGCCTCAGAGAAGGTCTTGTACTAGACAGGTGTTGATGACATaGAAGTACACAGAGGCCAAA | + |
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Preference number: 5 (lower is better) Translates to: YYWFLIETCRPQRRSCTRQVLMT*KYTEAK Trigger: TTTGGCCTCTGTGTACTTCAATGTCATCAACACCTG...TCTAGTACAAGACCTTCTCTGAGGCCTGCATGTCTCAATGAGGAACCAATAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| CDS-3UTR CAA 90 bp | CTCAGAGAAGGTCTTGTACTAGATTTGATTCTCACTTGGGGTAGCAGTTGCTTTAACTGTTCTCTGATCTaGAAGTGGCGTGTGACAAAA | + |
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Preference number: 5 (lower is better) Translates to: LREGLVLDLILTWGSSCFNCSLI*KWRVTK Trigger: TTTTGTCACACGCCACTTCAAGATCAGAGAACAGTT...AAAGCAACTGCTACCCCAAGTGAGAATCAAATCTAGTACAAGACCTTCTCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026273.11 |
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| CDS TCA 72 bp | TGGGCACACTCTGTTGACCTCGGTCTTCCTGGGTGCTaGCCAGGTCCTCCAGCGCCTCCCCAGGGCTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: WAHSVDLGLPGC*PGPPAPPQGWS Trigger: GCTCCAGCCCTGGGGAGGCGCTGGAGGACCTGGTCAGCACCCAGGAAGACCGAGGTCAACAGAGTGTGCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026273.11 ENSMUST00000163397.9 ENSMUST00000168824.9 |
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| CDS CAA 90 bp | ACTTTGGCCGCACCTTCTCCACAACCCCAGGGTGGGCACACTCTGTaGACCTCGGTCTTCCTGGGTGCTGACCAGGTCCTCCAGCGCCTC | + |
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Preference number: 6 (lower is better) Translates to: TLAAPSPQPQGGHTL*TSVFLGADQVLQRL Trigger: GAGGCGCTGGAGGACCTGGTCAGCACCCAGGAAGACCGAGGTCAACAGAGTGTGCCCACCCTGGGGTTGTGGAGAAGGTGCGGCCAAAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026273.11 ENSMUST00000163397.9 ENSMUST00000168824.9 |
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| CDS TCA 72 bp | CACCTTCTCCACAACCCCAGGGTGGGCACACTCTGTTaGCCTCGGTCTTCCTGGGTGCTGACCAGGTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: HLLHNPRVGTLC*PRSSWVLTRSS Trigger: GGAGGACCTGGTCAGCACCCAGGAAGACCGAGGTCAACAGAGTGTGCCCACCCTGGGGTTGTGGAGAAGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026273.11 ENSMUST00000163397.9 ENSMUST00000168824.9 |
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| CDS CCA 72 bp | TCCCACTTTGGCCGCACCTTCTCCACAACCCCAGGGTaGGCACACTCTGTTGACCTCGGTCTTCCTGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: SHFGRTFSTTPG*AHSVDLGLPGC Trigger: GCACCCAGGAAGACCGAGGTCAACAGAGTGTGCCCACCCTGGGGTTGTGGAGAAGGTGCGGCCAAAGTGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026273.11 ENSMUST00000163397.9 ENSMUST00000168824.9 |
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| CDS CAA 72 bp | GCACCTTCTCCACAACCCCAGGGTGGGCACACTCTGTaGACCTCGGTCTTCCTGGGTGCTGACCAGGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: APSPQPQGGHTL*TSVFLGADQVL Trigger: GAGGACCTGGTCAGCACCCAGGAAGACCGAGGTCAACAGAGTGTGCCCACCCTGGGGTTGTGGAGAAGGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026273.11 ENSMUST00000163397.9 ENSMUST00000168824.9 |
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| CDS CAA 72 bp | TACAGACAAGTAGGAACTGCAGGGGGTTGTCCCACTTaGGCCGCACCTTCTCCACAACCCCAGGGTGGGCAC | + |
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Preference number: 6 (lower is better) Translates to: YRQVGTAGGCPT*AAPSPQPQGGH Trigger: GTGCCCACCCTGGGGTTGTGGAGAAGGTGCGGCCAAAGTGGGACAACCCCCTGCAGTTCCTACTTGTCTGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026273.11 ENSMUST00000163397.9 ENSMUST00000168824.9 |
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| CDS CAA 90 bp | CATAGGAGATACAGACAAGTAGGAACTGCAGGGGGTTGTCCCACTTaGGCCGCACCTTCTCCACAACCCCAGGGTGGGCACACTCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: HRRYRQVGTAGGCPT*AAPSPQPQGGHTLL Trigger: CAACAGAGTGTGCCCACCCTGGGGTTGTGGAGAAGGTGCGGCCAAAGTGGGACAACCCCCTGCAGTTCCTACTTGTCTGTATCTCCTATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026273.11 ENSMUST00000163397.9 ENSMUST00000168824.9 |
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