Pregenerated sensors for SLC6A20A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036814Ensembl transcript IDs: ENSMUST00000040960.13, ENSMUST00000170591.2, ENSMUST00000171647.9
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGGAAGGCACAACAGTGACTATACTGAGAGGAGGGAACGGACTCTaGTGTGCTTCACAAGGGATGGGCCCACTCTTCAAGCCTGGAAAC | + |
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Preference number: 1 (lower is better) Translates to: QEGTTVTILRGGNGL*CASQGMGPLFKPGN Trigger: GTTTCCAGGCTTGAAGAGTGGGCCCATCCCTTGTGAAGCACAGCAGAGTCCGTTCCCTCCTCTCAGTATAGTCACTGTTGTGCCTTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
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| 3UTR CCA 90 bp | TGCCCACATTTGCTATTGGTAGAAGAAAGGAACAAAGGACATCTCTaGTTGATGTTCCAAGTGATGTCTACGCATTTTCAACGGTGTCTG | + |
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Preference number: 1 (lower is better) Translates to: CPHLLLVEERNKGHL*LMFQVMSTHFQRCL Trigger: CAGACACCGTTGAAAATGCGTAGACATCACTTGGAACATCAACCAGAGATGTCCTTTGTTCCTTTCTTCTACCAATAGCAAATGTGGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
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| 3UTR CCA 90 bp | AATCCCCTGGAACTGGAGTTGTTGGAGGTTGTAGATTTCCCAATATaGATGTTAGGAACCAAATGTTGGTCCTCTGCAAATGTAGTAAAG | + |
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Preference number: 1 (lower is better) Translates to: NPLELELLEVVDFPI*MLGTKCWSSANVVK Trigger: CTTTACTACATTTGCAGAGGACCAACATTTGGTTCCTAACATCCATATTGGGAAATCTACAACCTCCAACAACTCCAGTTCCAGGGGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
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| 3UTR GCA 90 bp | TGTAGATTTCCCAATATGGATGTTAGGAACCAAATGTTGGTCCTCTaGAAATGTAGTAAAGATTTAGCCAGGAAAATTTCTCTTCAGCCC | + |
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Preference number: 1 (lower is better) Translates to: CRFPNMDVRNQMLVL*KCSKDLARKISLQP Trigger: GGGCTGAAGAGAAATTTTCCTGGCTAAATCTTTACTACATTTGCAGAGGACCAACATTTGGTTCCTAACATCCATATTGGGAAATCTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
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| 3UTR-3UTR CCA 90 bp | AAGCTCCCTAATCTTCTTTACAGACTCAGGAGGCCCCAGACCAGCACTCCAGCCGACTGTGAAACAGAGTaGCTGACTTCCGGTCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: KLPNLLYRLRRPQTSTPADCETE*LTSGLW Trigger: CCAGAGACCGGAAGTCAGCCACTCTGTTTCACAGTC...GGCTGGAGTGCTGGTCTGGGGCCTCCTGAGTCTGTAAAGAAGATTAGGGAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
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| 3UTR-3UTR CCA 90 bp | CAGGAAGGCACAACAGTGACTATACTGAGAGGAGGGAACGGACTCTGCTGTGCTCCCACTCTTCAAGCCTaGAAACAGCCTGATGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: QEGTTVTILRGGNGLCCAPTLQA*KQPDEK Trigger: TTTCTCATCAGGCTGTTTCCAGGCTTGAAGAGTGGG...AGCACAGCAGAGTCCGTTCCCTCCTCTCAGTATAGTCACTGTTGTGCCTTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
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| 3UTR-3UTR CCA 90 bp | GAGAAAGGTGACTTCCATTGGAACCCCAGAAAAAGTCTCTTAGTATTATATCCTGACTGTGAAACAGAGTaGCTGACTTCCGGTCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: EKGDFHWNPRKSLLVLYPDCETE*LTSGLW Trigger: CCAGAGACCGGAAGTCAGCCACTCTGTTTCACAGTC...AGGATATAATACTAAGAGACTTTTTCTGGGGTTCCAATGGAAGTCACCTTTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
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| 3UTR-3UTR CCA 90 bp | TCAGCCCTGCAAAAGGCCCTTCTAGTGCCCACATTTGCTATTGGTAGAAGAAAGAACAAAGGACATCTCTaGTTGATGTTCCAAGTGATG | + |
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Preference number: 2 (lower is better) Translates to: SALQKALLVPTFAIGRRKNKGHL*LMFQVM Trigger: CATCACTTGGAACATCAACCAGAGATGTCCTTTGTT...CTTTCTTCTACCAATAGCAAATGTGGGCACTAGAAGGGCCTTTTGCAGGGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
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| 3UTR CAA 90 bp | CAACAAGGACAGGAGATGATGTTGAATCCCCTGGAACTGGAGTTGTaGGAGGTTGTAGATTTCCCAATATGGATGTTAGGAACCAAATGT | + |
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Preference number: 2 (lower is better) Translates to: QQGQEMMLNPLELEL*EVVDFPIWMLGTKC Trigger: ACATTTGGTTCCTAACATCCATATTGGGAAATCTACAACCTCCAACAACTCCAGTTCCAGGGGATTCAACATCATCTCCTGTCCTTGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
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| 3UTR-3UTR TCA 90 bp | TTCAATTCCATGAGCTCAGGGGAGCAAGGATTGTTAGTACAGGAAGAACTCTCATTATGCAGAAGTGAATaGAGGTGGTTGCAAGTGATG | + |
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Preference number: 2 (lower is better) Translates to: FNSMSSGEQGLLVQEELSLCRSE*RWLQVM Trigger: CATCACTTGCAACCACCTTCATTCACTTCTGCATAA...TGAGAGTTCTTCCTGTACTAACAATCCTTGCTCCCCTGAGCTCATGGAATTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
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| 3UTR-3UTR CCA 90 bp | GATTCAGAGAAAGGTGACTTCCATTGGAACCCCAGAAAAAGTCTCTTAGTATTAACAAAGACCTTCAGATaGGAGAGGATGGATGGTCCC | + |
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Preference number: 2 (lower is better) Translates to: DSEKGDFHWNPRKSLLVLTKTFR*ERMDGP Trigger: GGGACCATCCATCCTCTCCCATCTGAAGGTCTTTGT...TAATACTAAGAGACTTTTTCTGGGGTTCCAATGGAAGTCACCTTTCTCTGAATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
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| 3UTR CAA 90 bp | CCACATTTGCTATTGGTAGAAGAAAGGAACAAAGGACATCTCTGGTaGATGTTCCAAGTGATGTCTACGCATTTTCAACGGTGTCTGCAA | + |
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Preference number: 2 (lower is better) Translates to: PHLLLVEERNKGHLW*MFQVMSTHFQRCLQ Trigger: TTGCAGACACCGTTGAAAATGCGTAGACATCACTTGGAACATCAACCAGAGATGTCCTTTGTTCCTTTCTTCTACCAATAGCAAATGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
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| 3UTR-3UTR TCA 90 bp | GAAAATTTCTCTTCAGCCCTGCAAAAGGCCCTTCTAGTGCCCACATTTGCTATTATGCTTCAAAACCTCTaGCTCTGGTTGAAAAGCAAT | + |
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Preference number: 2 (lower is better) Translates to: ENFSSALQKALLVPTFAIMLQNL*LWLKSN Trigger: ATTGCTTTTCAACCAGAGTCAGAGGTTTTGAAGCAT...AATAGCAAATGTGGGCACTAGAAGGGCCTTTTGCAGGGCTGAAGAGAAATTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
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| 3UTR-3UTR TCA 90 bp | GAGAAAGGTGACTTCCATTGGAACCCCAGAAAAAGTCTCTTAGTATTATATCCTACCTCTGACTCTGGTTaGAAAGCAATTACCTACCCT | + |
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Preference number: 2 (lower is better) Translates to: EKGDFHWNPRKSLLVLYPTSDSG*KAITYP Trigger: AGGGTAGGTAATTGCTTTTCAACCAGAGTCAGAGGT...AGGATATAATACTAAGAGACTTTTTCTGGGGTTCCAATGGAAGTCACCTTTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
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| 3UTR-3UTR TCA 90 bp | TTCAATTCCATGAGCTCAGGGGAGCAAGGATTGTTAGTACAGGAAGAACTCTCAAATATTATGCAGAAGTaGATGAAGGTGGTTGCAAGT | + |
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Preference number: 2 (lower is better) Translates to: FNSMSSGEQGLLVQEELSNIMQK*MKVVAS Trigger: ACTTGCAACCACCTTCATTCACTTCTGCATAATATT...TGAGAGTTCTTCCTGTACTAACAATCCTTGCTCCCCTGAGCTCATGGAATTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
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| 3UTR-3UTR TCA 90 bp | GATTTCCCAATATGGATGTTAGGAACCAAATGTTGGTCCTCTGCAAATGTAGTACATTCACATGGTGCATaGATAACAGCCATAAATACG | + |
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Preference number: 2 (lower is better) Translates to: DFPIWMLGTKCWSSANVVHSHGA*ITAINT Trigger: CGTATTTATGGCTGTTATTCATGCACCATGTGAATG...TACTACATTTGCAGAGGACCAACATTTGGTTCCTAACATCCATATTGGGAAATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
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| 3UTR CAA 90 bp | GTTGGAGGTTGTAGATTTCCCAATATGGATGTTAGGAACCAAATGTaGGTCCTCTGCAAATGTAGTAAAGATTTAGCCAGGAAAATTTCT | + |
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Preference number: 2 (lower is better) Translates to: VGGCRFPNMDVRNQM*VLCKCSKDLARKIS Trigger: AGAAATTTTCCTGGCTAAATCTTTACTACATTTGCAGAGGACCAACATTTGGTTCCTAACATCCATATTGGGAAATCTACAACCTCCAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
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| 3UTR CCA 72 bp | CTGTGCTTCACAAGGGATGGGCCCACTCTTCAAGCCTaGAAACAGCCTGATGAGAAATCAGGAGTAAACATT | + |
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Preference number: 3 (lower is better) Translates to: LCFTRDGPTLQA*KQPDEKSGVNI Trigger: AATGTTTACTCCTGATTTCTCATCAGGCTGTTTCCAGGCTTGAAGAGTGGGCCCATCCCTTGTGAAGCACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
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| 3UTR TCA 72 bp | TGGCCCACTGTGAGGAACCTTAGATTCAGAGAAAGGTaGCTTCCATTGGAACCCCAGAAAAAGTCTCTTAGT | + |
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Preference number: 3 (lower is better) Translates to: WPTVRNLRFRER*LPLEPQKKSLS Trigger: ACTAAGAGACTTTTTCTGGGGTTCCAATGGAAGTCACCTTTCTCTGAATCTAAGGTTCCTCACAGTGGGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
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| 3UTR TCA 72 bp | CTGTCTGTTTCCATAAGTAAAACTGTCCCACAGACGTaGCTTCTCTTCACCACTGGAAATGCTCAGTGTGTA | + |
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Preference number: 3 (lower is better) Translates to: LSVSISKTVPQT*LLFTTGNAQCV Trigger: TACACACTGAGCATTTCCAGTGGTGAAGAGAAGTCACGTCTGTGGGACAGTTTTACTTATGGAAACAGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
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| 3UTR CCA 72 bp | GAACTGGAGTTGTTGGAGGTTGTAGATTTCCCAATATaGATGTTAGGAACCAAATGTTGGTCCTCTGCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: ELELLEVVDFPI*MLGTKCWSSAN Trigger: ATTTGCAGAGGACCAACATTTGGTTCCTAACATCCATATTGGGAAATCTACAACCTCCAACAACTCCAGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
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| 3UTR-3UTR CAA 90 bp | TCTTATGTTTTACAAACTGTGATCATTCTGAAACCAGGTATCAAGAAAAGCTGGTCAGGGGAGCAAGGATaGTTAGTACAGGAAGAACTC | + |
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Preference number: 3 (lower is better) Translates to: SYVLQTVIILKPGIKKSWSGEQG*LVQEEL Trigger: GAGTTCTTCCTGTACTAACAATCCTTGCTCCCCTGA...CCAGCTTTTCTTGATACCTGGTTTCAGAATGATCACAGTTTGTAAAACATAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
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| 3UTR-3UTR CAA 90 bp | GATTTCCCAATATGGATGTTAGGAACCAAATGTTGGTCCTCTGCAAATGTAGTAAAAGGACATCTCTGGTaGATGTTCCAAGTGATGTCT | + |
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Preference number: 3 (lower is better) Translates to: DFPIWMLGTKCWSSANVVKGHLW*MFQVMS Trigger: AGACATCACTTGGAACATCAACCAGAGATGTCCTTT...TACTACATTTGCAGAGGACCAACATTTGGTTCCTAACATCCATATTGGGAAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
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| 3UTR CCA 72 bp | TTGCTATTGGTAGAAGAAAGGAACAAAGGACATCTCTaGTTGATGTTCCAAGTGATGTCTACGCATTTTCAA | + |
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Preference number: 3 (lower is better) Translates to: LLLVEERNKGHL*LMFQVMSTHFQ Trigger: TTGAAAATGCGTAGACATCACTTGGAACATCAACCAGAGATGTCCTTTGTTCCTTTCTTCTACCAATAGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
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| 3UTR GCA 72 bp | TATAAGTTATCTGATACTCCGAATAAAGTTGGCTGTTaGGTCGGATTTTATCTCATTTTTAGGCTCCATGCT | + |
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Preference number: 3 (lower is better) Translates to: YKLSDTPNKVGC*VGFYLIFRLHA Trigger: AGCATGGAGCCTAAAAATGAGATAAAATCCGACGCAACAGCCAACTTTATTCGGAGTATCAGATAACTTATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
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| 3UTR TCA 72 bp | AAATCTAATATGTCACCTTATATGCTTCAAAACCTCTaGCTCTGGTTGAAAAGCAATTACCTACCCTCTAGT | + |
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Preference number: 3 (lower is better) Translates to: KSNMSPYMLQNL*LWLKSNYLPSS Trigger: ACTAGAGGGTAGGTAATTGCTTTTCAACCAGAGTCAGAGGTTTTGAAGCATATAAGGTGACATATTAGATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
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| CDS-3UTR GCA 90 bp | AAGCTCCCTAATCTTCTTTACAGACTCAGGAGGCCCCAGACCAGCACTCCAGCCTGCTGCCCTGCCGCATaGGCTGTCCCACGGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: KLPNLLYRLRRPQTSTPACCPAA*AVPRPA Trigger: AGCTGGCCGTGGGACAGCGCATGCGGCAGGGCAGCA...GGCTGGAGTGCTGGTCTGGGGCCTCCTGAGTCTGTAAAGAAGATTAGGGAGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
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| CDS-3UTR GCA 90 bp | AAGCTCCCTAATCTTCTTTACAGACTCAGGAGGCCCCAGACCAGCACTCCAGCCTCCAGGCACCAATGCTaGCCTGCCGCATGCGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: KLPNLLYRLRRPQTSTPASRHQC*PAACAV Trigger: GACAGCGCATGCGGCAGGGCAGCATTGGTGCCTGGA...GGCTGGAGTGCTGGTCTGGGGCCTCCTGAGTCTGTAAAGAAGATTAGGGAGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
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| CDS-3UTR TCA 90 bp | TCTTCTGCCAAGCTCCCTAATCTTCTTTACAGACTCAGGAGGCCCCAGACCAGCGTCACCAACTGCCCCTaGGTAGCATCCCAGGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: SSAKLPNLLYRLRRPQTSVTNCP*VASQAW Trigger: CCAAGCCTGGGATGCTACTCAGGGGCAGTTGGTGAC...GCTGGTCTGGGGCCTCCTGAGTCTGTAAAGAAGATTAGGGAGCTTGGCAGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
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| CDS-3UTR GCA 90 bp | CAACAAGGACAGGAGATGATGTTGAATCCCCTGGAACTGGAGTTGTTGGAGGTTTGCTGCCCTGCCGCATaGGCTGTCCCACGGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: QQGQEMMLNPLELELLEVCCPAA*AVPRPA Trigger: AGCTGGCCGTGGGACAGCGCATGCGGCAGGGCAGCA...AACCTCCAACAACTCCAGTTCCAGGGGATTCAACATCATCTCCTGTCCTTGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
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| CDS-3UTR GCA 90 bp | CTAATCTTCTTTACAGACTCAGGAGGCCCCAGACCAGCACTCCAGCCAAGAAGTTCCTCCAGGCACCAATaGTGCCCTGCCGCATGCGCT | + |
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Preference number: 4 (lower is better) Translates to: LIFFTDSGGPRPALQPRSSSRHQ*CPAACA Trigger: AGCGCATGCGGCAGGGCAGCATTGGTGCCTGGAGGA...ACTTCTTGGCTGGAGTGCTGGTCTGGGGCCTCCTGAGTCTGTAAAGAAGATTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
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| CDS-3UTR CCA 90 bp | AAGCTCCCTAATCTTCTTTACAGACTCAGGAGGCCCCAGACCAGCACTCCAGCCCACGGCAGGGGATCCTaGAAGGAGTGGAAGAGGTAC | + |
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Preference number: 4 (lower is better) Translates to: KLPNLLYRLRRPQTSTPAHGRGS*KEWKRY Trigger: GTACCTCTTCCACTCCTTCCAGGATCCCCTGCCGTG...GGCTGGAGTGCTGGTCTGGGGCCTCCTGAGTCTGTAAAGAAGATTAGGGAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
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| CDS-3UTR GCA 90 bp | TCTTCTGCCAAGCTCCCTAATCTTCTTTACAGACTCAGGAGGCCCCAGACCAGCCCACGGCGTAGGAGATaGAGGCGAACACGAACTGCA | + |
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Preference number: 4 (lower is better) Translates to: SSAKLPNLLYRLRRPQTSPRRRR*RRTRTA Trigger: TGCAGTTCGTGTTCGCCTGCATCTCCTACGCCGTGG...GCTGGTCTGGGGCCTCCTGAGTCTGTAAAGAAGATTAGGGAGCTTGGCAGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
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| CDS-3UTR CCA 90 bp | AAGCTCCCTAATCTTCTTTACAGACTCAGGAGGCCCCAGACCAGCACTCCAGCCCTCCAGGTACAGGAGTaGCATCCCCTCCACAATGAG | + |
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Preference number: 4 (lower is better) Translates to: KLPNLLYRLRRPQTSTPALQVQE*HPLHNE Trigger: CTCATTGTGGAGGGGATGCCACTCCTGTACCTGGAG...GGCTGGAGTGCTGGTCTGGGGCCTCCTGAGTCTGTAAAGAAGATTAGGGAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
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| CDS-3UTR CCA 90 bp | TCTTCTGCCAAGCTCCCTAATCTTCTTTACAGACTCAGGAGGCCCCAGACCAGCGTGGTTGCTGTTCAGTaGGCAGACAGACCACGGCAG | + |
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Preference number: 4 (lower is better) Translates to: SSAKLPNLLYRLRRPQTSVVAVQ*ADRPRQ Trigger: CTGCCGTGGTCTGTCTGCCCACTGAACAGCAACCAC...GCTGGTCTGGGGCCTCCTGAGTCTGTAAAGAAGATTAGGGAGCTTGGCAGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
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| CDS-3UTR CCA 90 bp | TCTTCTGCCAAGCTCCCTAATCTTCTTTACAGACTCAGGAGGCCCCAGACCAGCCCATTGGTGGCTCCATaGAGTGTAAGGCCACGGACC | + |
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Preference number: 4 (lower is better) Translates to: SSAKLPNLLYRLRRPQTSPLVAP*SVRPRT Trigger: GGTCCGTGGCCTTACACTCCATGGAGCCACCAATGG...GCTGGTCTGGGGCCTCCTGAGTCTGTAAAGAAGATTAGGGAGCTTGGCAGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040960.13 |
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| CDS-3UTR CCA 90 bp | AAGCTCCCTAATCTTCTTTACAGACTCAGGAGGCCCCAGACCAGCACTCCAGCCGTAGCATCCCAGGCTTaGTACTGCAGTGTTCCCGTG | + |
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Preference number: 4 (lower is better) Translates to: KLPNLLYRLRRPQTSTPAVASQA*YCSVPV Trigger: CACGGGAACACTGCAGTACCAAGCCTGGGATGCTAC...GGCTGGAGTGCTGGTCTGGGGCCTCCTGAGTCTGTAAAGAAGATTAGGGAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
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| CDS-3UTR TCA 90 bp | AAGCTCCCTAATCTTCTTTACAGACTCAGGAGGCCCCAGACCAGCACTCCAGCCAAAACCCAAGCCCAGTaGGAAGAAGATCTGCGTGGC | + |
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Preference number: 4 (lower is better) Translates to: KLPNLLYRLRRPQTSTPAKTQAQ*EEDLRG Trigger: GCCACGCAGATCTTCTTCTCACTGGGCTTGGGTTTT...GGCTGGAGTGCTGGTCTGGGGCCTCCTGAGTCTGTAAAGAAGATTAGGGAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
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| CDS-3UTR TCA 90 bp | CTAATCTTCTTTACAGACTCAGGAGGCCCCAGACCAGCACTCCAGCCAAGAAGTTCCCAGCCTCCATGGTaGACACCATGCCAACAGCAC | + |
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Preference number: 4 (lower is better) Translates to: LIFFTDSGGPRPALQPRSSQPPW*TPCQQH Trigger: GTGCTGTTGGCATGGTGTTCACCATGGAGGCTGGGA...ACTTCTTGGCTGGAGTGCTGGTCTGGGGCCTCCTGAGTCTGTAAAGAAGATTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
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| CDS-3UTR CCA 90 bp | TCTTCTGCCAAGCTCCCTAATCTTCTTTACAGACTCAGGAGGCCCCAGACCAGCGTAGCATCCCAGGCTTaGTACTGCAGTGTTCCCGTG | + |
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Preference number: 4 (lower is better) Translates to: SSAKLPNLLYRLRRPQTSVASQA*YCSVPV Trigger: CACGGGAACACTGCAGTACCAAGCCTGGGATGCTAC...GCTGGTCTGGGGCCTCCTGAGTCTGTAAAGAAGATTAGGGAGCTTGGCAGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
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| CDS-3UTR CCA 90 bp | CAGGAAGGCACAACAGTGACTATACTGAGAGGAGGGAACGGACTCTGCTGTGCTTCCAGGCCTTGGGGTTaGCTAGCTGTTCCATCTTGC | + |
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Preference number: 4 (lower is better) Translates to: QEGTTVTILRGGNGLCCASRPWG*LAVPSC Trigger: GCAAGATGGAACAGCTAGCCAACCCCAAGGCCTGGA...AGCACAGCAGAGTCCGTTCCCTCCTCTCAGTATAGTCACTGTTGTGCCTTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
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| CDS-3UTR GCA 90 bp | CTAATCTTCTTTACAGACTCAGGAGGCCCCAGACCAGCACTCCAGCCAAGAAGTCGGTGCCTCTCAGGATaGACAGATAGACCATCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LIFFTDSGGPRPALQPRSRCLSG*TDRPSA Trigger: GGCTGATGGTCTATCTGTGCATCCTGAGAGGCACCG...ACTTCTTGGCTGGAGTGCTGGTCTGGGGCCTCCTGAGTCTGTAAAGAAGATTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
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| CDS-3UTR GCA 90 bp | CTAATCTTCTTTACAGACTCAGGAGGCCCCAGACCAGCACTCCAGCCAAGAAGTTCCCAGGCTTGGTACTaGAGTGTTCCCGTGAGGATG | + |
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Preference number: 4 (lower is better) Translates to: LIFFTDSGGPRPALQPRSSQAWY*SVPVRM Trigger: CATCCTCACGGGAACACTGCAGTACCAAGCCTGGGA...ACTTCTTGGCTGGAGTGCTGGTCTGGGGCCTCCTGAGTCTGTAAAGAAGATTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
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| CDS-3UTR GCA 90 bp | CTAATCTTCTTTACAGACTCAGGAGGCCCCAGACCAGCACTCCAGCCAAGAAGTCAAAAGCGATCAGGCTaGCAAAACCCAAGCCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: LIFFTDSGGPRPALQPRSQKRSG*QNPSPV Trigger: CACTGGGCTTGGGTTTTGGCAGCCTGATCGCTTTTG...ACTTCTTGGCTGGAGTGCTGGTCTGGGGCCTCCTGAGTCTGTAAAGAAGATTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
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| CDS-3UTR GCA 90 bp | AAGCTCCCTAATCTTCTTTACAGACTCAGGAGGCCCCAGACCAGCACTCCAGCCCTGTGTTTCCAAGCATaGTTCCGATACCCAGCATCA | + |
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Preference number: 4 (lower is better) Translates to: KLPNLLYRLRRPQTSTPALCFQA*FRYPAS Trigger: TGATGCTGGGTATCGGAAGCATGCTTGGAAACACAG...GGCTGGAGTGCTGGTCTGGGGCCTCCTGAGTCTGTAAAGAAGATTAGGGAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
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| CDS-3UTR CCA 90 bp | TCTTCTGCCAAGCTCCCTAATCTTCTTTACAGACTCAGGAGGCCCCAGACCAGCACTCCTCCATTCTCCTaGATGGACGGTGAGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSAKLPNLLYRLRRPQTSTPPFS*MDGEML Trigger: CAACATCTCACCGTCCATCCAGGAGAATGGAGGAGT...GCTGGTCTGGGGCCTCCTGAGTCTGTAAAGAAGATTAGGGAGCTTGGCAGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
||
| CDS-3UTR CCA 90 bp | TCTTCTGCCAAGCTCCCTAATCTTCTTTACAGACTCAGGAGGCCCCAGACCAGCGCTTCTGGCAGTTGTTaGAGGGTTCATTGTAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSAKLPNLLYRLRRPQTSASGSC*RVHCSW Trigger: CCAGCTACAATGAACCCTCCAACAACTGCCAGAAGC...GCTGGTCTGGGGCCTCCTGAGTCTGTAAAGAAGATTAGGGAGCTTGGCAGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
||
| CDS-3UTR CCA 90 bp | CAGGAAGGCACAACAGTGACTATACTGAGAGGAGGGAACGGACTCTGCTGTGCTGCTTCTGGCAGTTGTTaGAGGGTTCATTGTAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QEGTTVTILRGGNGLCCAASGSC*RVHCSW Trigger: CCAGCTACAATGAACCCTCCAACAACTGCCAGAAGC...AGCACAGCAGAGTCCGTTCCCTCCTCTCAGTATAGTCACTGTTGTGCCTTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
||
| CDS-3UTR CCA 90 bp | CAACAAGGACAGGAGATGATGTTGAATCCCCTGGAACTGGAGTTGTTGGAGGTTCTCCAGGTACAGGAGTaGCATCCCCTCCACAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: QQGQEMMLNPLELELLEVLQVQE*HPLHNE Trigger: CTCATTGTGGAGGGGATGCCACTCCTGTACCTGGAG...AACCTCCAACAACTCCAGTTCCAGGGGATTCAACATCATCTCCTGTCCTTGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
||
| CDS-3UTR CCA 90 bp | CTAATCTTCTTTACAGACTCAGGAGGCCCCAGACCAGCACTCCAGCCAAGAAGTATACCAAACCTGAAATaGCCTCCTTGGGCAGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LIFFTDSGGPRPALQPRSIPNLK*PPWAGS Trigger: GCTACCTGCCCAAGGAGGCCATTTCAGGTTTGGTAT...ACTTCTTGGCTGGAGTGCTGGTCTGGGGCCTCCTGAGTCTGTAAAGAAGATTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
||
| CDS-3UTR TCA 90 bp | GAATCCCCTGGAACTGGAGTTGTTGGAGGTTGTAGATTTCCCAATATGGATGTTTGTCAGTCAGAGGGGTaGGGATGGCCGCTGTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ESPGTGVVGGCRFPNMDVCQSEG*GWPLCF Trigger: GAAACACAGCGGCCATCCTCACCCCTCTGACTGACA...AACATCCATATTGGGAAATCTACAACCTCCAACAACTCCAGTTCCAGGGGATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
||
| CDS-3UTR GCA 90 bp | TTCAATTCCATGAGCTCAGGGGAGCAAGGATTGTTAGTACAGGAAGAACTCTCACCACGGCGTAGGAGATaGAGGCGAACACGAACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FNSMSSGEQGLLVQEELSPRRRR*RRTRTA Trigger: TGCAGTTCGTGTTCGCCTGCATCTCCTACGCCGTGG...TGAGAGTTCTTCCTGTACTAACAATCCTTGCTCCCCTGAGCTCATGGAATTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
||
| CDS-3UTR GCA 90 bp | GATTCAGAGAAAGGTGACTTCCATTGGAACCCCAGAAAAAGTCTCTTAGTATTAGCACCAATGCTGCCCTaGCGCATGCGCTGTCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: DSEKGDFHWNPRKSLLVLAPMLP*RMRCPT Trigger: CGTGGGACAGCGCATGCGGCAGGGCAGCATTGGTGC...TAATACTAAGAGACTTTTTCTGGGGTTCCAATGGAAGTCACCTTTCTCTGAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
||
| CDS-3UTR CCA 90 bp | GAAAATTTCTCTTCAGCCCTGCAAAAGGCCCTTCTAGTGCCCACATTTGCTATTGGGTGCGGCCAGTCATaGCCCGAAGGTCACTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ENFSSALQKALLVPTFAIGCGQS*PEGHFQ Trigger: TTGAAAGTGACCTTCGGGCCATGACTGGCCGCACCC...AATAGCAAATGTGGGCACTAGAAGGGCCTTTTGCAGGGCTGAAGAGAAATTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
||
| CDS-3UTR TCA 90 bp | TCTTCTGCCAAGCTCCCTAATCTTCTTTACAGACTCAGGAGGCCCCAGACCAGCTGGCCGCATAGTCATTaGATATGTCAAACCAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSAKLPNLLYRLRRPQTSWPHSH*ICQTSS Trigger: ACTACTGGTTTGACATATTCAATGACTATGCGGCCA...GCTGGTCTGGGGCCTCCTGAGTCTGTAAAGAAGATTAGGGAGCTTGGCAGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
||
| CDS-3UTR GCA 90 bp | GATTTCCCAATATGGATGTTAGGAACCAAATGTTGGTCCTCTGCAAATGTAGTATCCTCCAGGCACCAATaGTGCCCTGCCGCATGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: DFPIWMLGTKCWSSANVVSSRHQ*CPAACA Trigger: AGCGCATGCGGCAGGGCAGCATTGGTGCCTGGAGGA...TACTACATTTGCAGAGGACCAACATTTGGTTCCTAACATCCATATTGGGAAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
||
| CDS-3UTR GCA 90 bp | GAAAATTTCTCTTCAGCCCTGCAAAAGGCCCTTCTAGTGCCCACATTTGCTATTGAAGATCTGCGTGGCTaGATTGATCCAGGCCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ENFSSALQKALLVPTFAIEDLRG*IDPGLG Trigger: CCCAAGGCCTGGATCAATGCAGCCACGCAGATCTTC...AATAGCAAATGTGGGCACTAGAAGGGCCTTTTGCAGGGCTGAAGAGAAATTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
||
| CDS-3UTR GCA 90 bp | CTAATCTTCTTTACAGACTCAGGAGGCCCCAGACCAGCACTCCAGCCAAGAAGTGACACAATAATGGCATaGTTCTGGCAGTTGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LIFFTDSGGPRPALQPRSDTIMA*FWQLLE Trigger: CTCCAACAACTGCCAGAAGCATGCCATTATTGTGTC...ACTTCTTGGCTGGAGTGCTGGTCTGGGGCCTCCTGAGTCTGTAAAGAAGATTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
||
| CDS-3UTR GCA 90 bp | CTAATCTTCTTTACAGACTCAGGAGGCCCCAGACCAGCACTCCAGCCAAGAAGTGTTTGGGTAAGTAGATaGCAGGTAGTTCTTCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: LIFFTDSGGPRPALQPRSVWVSR*QVVLHL Trigger: GAGGTGAAGAACTACCTGGCATCTACTTACCCAAAC...ACTTCTTGGCTGGAGTGCTGGTCTGGGGCCTCCTGAGTCTGTAAAGAAGATTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
||
| CDS-3UTR CCA 90 bp | CAACAAGGACAGGAGATGATGTTGAATCCCCTGGAACTGGAGTTGTTGGAGGTTACTCCTCCATTCTCCTaGATGGACGGTGAGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QQGQEMMLNPLELELLEVTPPFS*MDGEML Trigger: CAACATCTCACCGTCCATCCAGGAGAATGGAGGAGT...AACCTCCAACAACTCCAGTTCCAGGGGATTCAACATCATCTCCTGTCCTTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
||
| CDS-3UTR CCA 90 bp | CAACAAGGACAGGAGATGATGTTGAATCCCCTGGAACTGGAGTTGTTGGAGGTTATACCAAACCTGAAATaGCCTCCTTGGGCAGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: QQGQEMMLNPLELELLEVIPNLK*PPWAGS Trigger: GCTACCTGCCCAAGGAGGCCATTTCAGGTTTGGTAT...AACCTCCAACAACTCCAGTTCCAGGGGATTCAACATCATCTCCTGTCCTTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
||
| CDS-3UTR TCA 90 bp | GAGAAAGGTGACTTCCATTGGAACCCCAGAAAAAGTCTCTTAGTATTATATCCTGTCACCAACTGCCCCTaGGTAGCATCCCAGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EKGDFHWNPRKSLLVLYPVTNCP*VASQAW Trigger: CCAAGCCTGGGATGCTACTCAGGGGCAGTTGGTGAC...AGGATATAATACTAAGAGACTTTTTCTGGGGTTCCAATGGAAGTCACCTTTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
||
| CDS-3UTR GCA 90 bp | CTAGAATCAAGAAAACAACGGTCTTCAATACTGGCCTTAACCTTTGATGACAAATCCAGGCACCAATGCTaGCCTGCCGCATGCGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LESRKQRSSILALTFDDKSRHQC*PAACAV Trigger: GACAGCGCATGCGGCAGGGCAGCATTGGTGCCTGGA...TTTGTCATCAAAGGTTAAGGCCAGTATTGAAGACCGTTGTTTTCTTGATTCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
||
| CDS-3UTR GCA 90 bp | TTCAATTCCATGAGCTCAGGGGAGCAAGGATTGTTAGTACAGGAAGAACTCTCACAAAAGCGATCAGGCTaGCAAAACCCAAGCCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FNSMSSGEQGLLVQEELSQKRSG*QNPSPV Trigger: CACTGGGCTTGGGTTTTGGCAGCCTGATCGCTTTTG...TGAGAGTTCTTCCTGTACTAACAATCCTTGCTCCCCTGAGCTCATGGAATTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
||
| CDS-3UTR CCA 90 bp | CAGGAAGGCACAACAGTGACTATACTGAGAGGAGGGAACGGACTCTGCTGTGCTTTCACTGTACTTGTTTaGGTAAGTAGATGCCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QEGTTVTILRGGNGLCCAFTVLV*VSRCQV Trigger: TACCTGGCATCTACTTACCCAAACAAGTACAGTGAA...AGCACAGCAGAGTCCGTTCCCTCCTCTCAGTATAGTCACTGTTGTGCCTTCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
||
| CDS-3UTR CCA 90 bp | CAGGAAGGCACAACAGTGACTATACTGAGAGGAGGGAACGGACTCTGCTGTGCTGCAGTTTCTAATGTGTaGGAACACTTCACTGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: QEGTTVTILRGGNGLCCAAVSNV*EHFTVL Trigger: AAGTACAGTGAAGTGTTCCCACACATTAGAAACTGC...AGCACAGCAGAGTCCGTTCCCTCCTCTCAGTATAGTCACTGTTGTGCCTTCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
||
| CDS-3UTR CCA 90 bp | GATTCAGAGAAAGGTGACTTCCATTGGAACCCCAGAAAAAGTCTCTTAGTATTAGGGTGCGGCCAGTCATaGCCCGAAGGTCACTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: DSEKGDFHWNPRKSLLVLGCGQS*PEGHFQ Trigger: TTGAAAGTGACCTTCGGGCCATGACTGGCCGCACCC...TAATACTAAGAGACTTTTTCTGGGGTTCCAATGGAAGTCACCTTTCTCTGAATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
||
| CDS-3UTR TCA 90 bp | CTAGAATCAAGAAAACAACGGTCTTCAATACTGGCCTTAACCTTTGATGACAAATGTCAGTCAGAGGGGTaGGGATGGCCGCTGTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LESRKQRSSILALTFDDKCQSEG*GWPLCF Trigger: GAAACACAGCGGCCATCCTCACCCCTCTGACTGACA...TTTGTCATCAAAGGTTAAGGCCAGTATTGAAGACCGTTGTTTTCTTGATTCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
||
| CDS-3UTR TCA 90 bp | GATTCAGAGAAAGGTGACTTCCATTGGAACCCCAGAAAAAGTCTCTTAGTATTATCTCTACCAGCACAATaGGCAGCAGAGACAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DSEKGDFHWNPRKSLLVLSLPAQ*AAETGW Trigger: CCACCCTGTCTCTGCTGCTCATTGTGCTGGTAGAGA...TAATACTAAGAGACTTTTTCTGGGGTTCCAATGGAAGTCACCTTTCTCTGAATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
||
| CDS-3UTR TCA 90 bp | GATTTCCCAATATGGATGTTAGGAACCAAATGTTGGTCCTCTGCAAATGTAGTATCTCTACCAGCACAATaGGCAGCAGAGACAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DFPIWMLGTKCWSSANVVSLPAQ*AAETGW Trigger: CCACCCTGTCTCTGCTGCTCATTGTGCTGGTAGAGA...TACTACATTTGCAGAGGACCAACATTTGGTTCCTAACATCCATATTGGGAAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
||
| CDS-3UTR GCA 90 bp | GATTCAGAGAAAGGTGACTTCCATTGGAACCCCAGAAAAAGTCTCTTAGTATTACGTAGCCTGTGTGGTTaGTGTTCAGTGGGCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: DSEKGDFHWNPRKSLLVLRSLCG*CSVGRQ Trigger: CTGTCTGCCCACTGAACAGCAACCACACAGGCTACG...TAATACTAAGAGACTTTTTCTGGGGTTCCAATGGAAGTCACCTTTCTCTGAATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
||
| CDS-3UTR GCA 90 bp | GAGAAAGGTGACTTCCATTGGAACCCCAGAAAAAGTCTCTTAGTATTATATCCTGAAGATCTGCGTGGCTaGATTGATCCAGGCCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EKGDFHWNPRKSLLVLYPEDLRG*IDPGLG Trigger: CCCAAGGCCTGGATCAATGCAGCCACGCAGATCTTC...AGGATATAATACTAAGAGACTTTTTCTGGGGTTCCAATGGAAGTCACCTTTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
||
| CDS-3UTR CCA 90 bp | CTAGAATCAAGAAAACAACGGTCTTCAATACTGGCCTTAACCTTTGATGACAAACACGGCAGGGGATCCTaGAAGGAGTGGAAGAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LESRKQRSSILALTFDDKHGRGS*KEWKRY Trigger: GTACCTCTTCCACTCCTTCCAGGATCCCCTGCCGTG...TTTGTCATCAAAGGTTAAGGCCAGTATTGAAGACCGTTGTTTTCTTGATTCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
||
| CDS-3UTR TCA 90 bp | GATTTCCCAATATGGATGTTAGGAACCAAATGTTGGTCCTCTGCAAATGTAGTAAAAACCCAAGCCCAGTaGGAAGAAGATCTGCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: DFPIWMLGTKCWSSANVVKTQAQ*EEDLRG Trigger: GCCACGCAGATCTTCTTCTCACTGGGCTTGGGTTTT...TACTACATTTGCAGAGGACCAACATTTGGTTCCTAACATCCATATTGGGAAATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
||
| CDS-3UTR GCA 90 bp | CTAGAATCAAGAAAACAACGGTCTTCAATACTGGCCTTAACCTTTGATGACAAACGTAGCCTGTGTGGTTaGTGTTCAGTGGGCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: LESRKQRSSILALTFDDKRSLCG*CSVGRQ Trigger: CTGTCTGCCCACTGAACAGCAACCACACAGGCTACG...TTTGTCATCAAAGGTTAAGGCCAGTATTGAAGACCGTTGTTTTCTTGATTCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
||
| CDS-3UTR GCA 90 bp | CTAGAATCAAGAAAACAACGGTCTTCAATACTGGCCTTAACCTTTGATGACAAACGGTGCCTCTCAGGATaGACAGATAGACCATCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LESRKQRSSILALTFDDKRCLSG*TDRPSA Trigger: GGCTGATGGTCTATCTGTGCATCCTGAGAGGCACCG...TTTGTCATCAAAGGTTAAGGCCAGTATTGAAGACCGTTGTTTTCTTGATTCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
||
| CDS-3UTR GCA 90 bp | CTAGAATCAAGAAAACAACGGTCTTCAATACTGGCCTTAACCTTTGATGACAAATCCCAGGCTTGGTACTaGAGTGTTCCCGTGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LESRKQRSSILALTFDDKSQAWY*SVPVRM Trigger: CATCCTCACGGGAACACTGCAGTACCAAGCCTGGGA...TTTGTCATCAAAGGTTAAGGCCAGTATTGAAGACCGTTGTTTTCTTGATTCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
||
| 3UTR CAA 72 bp | CAGGAGATGATGTTGAATCCCCTGGAACTGGAGTTGTaGGAGGTTGTAGATTTCCCAATATGGATGTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QEMMLNPLELEL*EVVDFPIWMLG Trigger: TCCTAACATCCATATTGGGAAATCTACAACCTCCAACAACTCCAGTTCCAGGGGATTCAACATCATCTCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
||
| CDS-3UTR CCA 90 bp | GATTTCCCAATATGGATGTTAGGAACCAAATGTTGGTCCTCTGCAAATGTAGTAAGGGTTCATTGTAGCTaGCAAAAGCGATCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DFPIWMLGTKCWSSANVVRVHCS*QKRSGC Trigger: GCAGCCTGATCGCTTTTGCCAGCTACAATGAACCCT...TACTACATTTGCAGAGGACCAACATTTGGTTCCTAACATCCATATTGGGAAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
||
| CDS-3UTR CCA 90 bp | GAAAATTTCTCTTCAGCCCTGCAAAAGGCCCTTCTAGTGCCCACATTTGCTATTCAAGGTCAAAAGAATTaGTCAGCAGCAGAATCACCT | + |
|
Preference number: 4 (lower is better) Translates to: ENFSSALQKALLVPTFAIQGQKN*SAAESP Trigger: AGGTGATTCTGCTGCTGACCAATTCTTTTGACCTTG...AATAGCAAATGTGGGCACTAGAAGGGCCTTTTGCAGGGCTGAAGAGAAATTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
||
| CDS-3UTR CCA 90 bp | GAATCCCCTGGAACTGGAGTTGTTGGAGGTTGTAGATTTCCCAATATGGATGTTAGCACTGACCAGAGCTaGGAAACTTCCATGTTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: ESPGTGVVGGCRFPNMDVSTDQS*ETSMFL Trigger: TAAAAACATGGAAGTTTCCCAGCTCTGGTCAGTGCT...AACATCCATATTGGGAAATCTACAACCTCCAACAACTCCAGTTCCAGGGGATTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
||
| CDS-3UTR GCA 90 bp | GAGAAAGGTGACTTCCATTGGAACCCCAGAAAAAGTCTCTTAGTATTATATCCTCTGTGTTTCCAAGCATaGTTCCGATACCCAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: EKGDFHWNPRKSLLVLYPLCFQA*FRYPAS Trigger: TGATGCTGGGTATCGGAAGCATGCTTGGAAACACAG...AGGATATAATACTAAGAGACTTTTTCTGGGGTTCCAATGGAAGTCACCTTTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
||
| CDS-3UTR CCA 90 bp | CTAGAATCAAGAAAACAACGGTCTTCAATACTGGCCTTAACCTTTGATGACAAAAGGGTTCATTGTAGCTaGCAAAAGCGATCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LESRKQRSSILALTFDDKRVHCS*QKRSGC Trigger: GCAGCCTGATCGCTTTTGCCAGCTACAATGAACCCT...TTTGTCATCAAAGGTTAAGGCCAGTATTGAAGACCGTTGTTTTCTTGATTCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
||
| 3UTR CAA 72 bp | CTATTGGTAGAAGAAAGGAACAAAGGACATCTCTGGTaGATGTTCCAAGTGATGTCTACGCATTTTCAACGG | + |
|
Preference number: 4 (lower is better) Translates to: LLVEERNKGHLW*MFQVMSTHFQR Trigger: CCGTTGAAAATGCGTAGACATCACTTGGAACATCAACCAGAGATGTCCTTTGTTCCTTTCTTCTACCAATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
||
| CDS-3UTR GCA 90 bp | GATTCAGAGAAAGGTGACTTCCATTGGAACCCCAGAAAAAGTCTCTTAGTATTAGACACAATAATGGCATaGTTCTGGCAGTTGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DSEKGDFHWNPRKSLLVLDTIMA*FWQLLE Trigger: CTCCAACAACTGCCAGAAGCATGCCATTATTGTGTC...TAATACTAAGAGACTTTTTCTGGGGTTCCAATGGAAGTCACCTTTCTCTGAATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
||
| CDS-3UTR GCA 90 bp | GAGAAAGGTGACTTCCATTGGAACCCCAGAAAAAGTCTCTTAGTATTATATCCTGTTTGGGTAAGTAGATaGCAGGTAGTTCTTCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: EKGDFHWNPRKSLLVLYPVWVSR*QVVLHL Trigger: GAGGTGAAGAACTACCTGGCATCTACTTACCCAAAC...AGGATATAATACTAAGAGACTTTTTCTGGGGTTCCAATGGAAGTCACCTTTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
||
| CDS-3UTR CCA 90 bp | GATTCAGAGAAAGGTGACTTCCATTGGAACCCCAGAAAAAGTCTCTTAGTATTAATAATGGCATGCTTCTaGCAGTTGTTGGAGGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DSEKGDFHWNPRKSLLVLIMACF*QLLEGS Trigger: TGAACCCTCCAACAACTGCCAGAAGCATGCCATTAT...TAATACTAAGAGACTTTTTCTGGGGTTCCAATGGAAGTCACCTTTCTCTGAATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
||
| CDS-3UTR CCA 90 bp | GAGAAAGGTGACTTCCATTGGAACCCCAGAAAAAGTCTCTTAGTATTATATCCTATAATGGCATGCTTCTaGCAGTTGTTGGAGGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: EKGDFHWNPRKSLLVLYPIMACF*QLLEGS Trigger: TGAACCCTCCAACAACTGCCAGAAGCATGCCATTAT...AGGATATAATACTAAGAGACTTTTTCTGGGGTTCCAATGGAAGTCACCTTTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
||
| CDS-3UTR TCA 90 bp | GATTTCCCAATATGGATGTTAGGAACCAAATGTTGGTCCTCTGCAAATGTAGTATGGCCGCATAGTCATTaGATATGTCAAACCAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: DFPIWMLGTKCWSSANVVWPHSH*ICQTSS Trigger: ACTACTGGTTTGACATATTCAATGACTATGCGGCCA...TACTACATTTGCAGAGGACCAACATTTGGTTCCTAACATCCATATTGGGAAATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
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| CDS-3UTR CCA 90 bp | GATTCAGAGAAAGGTGACTTCCATTGGAACCCCAGAAAAAGTCTCTTAGTATTAAGCACTGACCAGAGCTaGGAAACTTCCATGTTTTTA | + |
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Preference number: 4 (lower is better) Translates to: DSEKGDFHWNPRKSLLVLSTDQS*ETSMFL Trigger: TAAAAACATGGAAGTTTCCCAGCTCTGGTCAGTGCT...TAATACTAAGAGACTTTTTCTGGGGTTCCAATGGAAGTCACCTTTCTCTGAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
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| CDS-3UTR CCA 90 bp | CTAGAATCAAGAAAACAACGGTCTTCAATACTGGCCTTAACCTTTGATGACAAACAAGGTCAAAAGAATTaGTCAGCAGCAGAATCACCT | + |
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Preference number: 4 (lower is better) Translates to: LESRKQRSSILALTFDDKQGQKN*SAAESP Trigger: AGGTGATTCTGCTGCTGACCAATTCTTTTGACCTTG...TTTGTCATCAAAGGTTAAGGCCAGTATTGAAGACCGTTGTTTTCTTGATTCTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
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| CDS-3UTR CCA 90 bp | GAGAAAGGTGACTTCCATTGGAACCCCAGAAAAAGTCTCTTAGTATTATATCCTTTCACTGTACTTGTTTaGGTAAGTAGATGCCAGGTA | + |
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Preference number: 4 (lower is better) Translates to: EKGDFHWNPRKSLLVLYPFTVLV*VSRCQV Trigger: TACCTGGCATCTACTTACCCAAACAAGTACAGTGAA...AGGATATAATACTAAGAGACTTTTTCTGGGGTTCCAATGGAAGTCACCTTTCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
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| 3UTR CAA 72 bp | TGTAGATTTCCCAATATGGATGTTAGGAACCAAATGTaGGTCCTCTGCAAATGTAGTAAAGATTTAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: CRFPNMDVRNQM*VLCKCSKDLAR Trigger: CCTGGCTAAATCTTTACTACATTTGCAGAGGACCAACATTTGGTTCCTAACATCCATATTGGGAAATCTACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
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| CDS-3UTR CCA 90 bp | CTAGAATCAAGAAAACAACGGTCTTCAATACTGGCCTTAACCTTTGATGACAAAGCAGTTTCTAATGTGTaGGAACACTTCACTGTACTT | + |
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Preference number: 4 (lower is better) Translates to: LESRKQRSSILALTFDDKAVSNV*EHFTVL Trigger: AAGTACAGTGAAGTGTTCCCACACATTAGAAACTGC...TTTGTCATCAAAGGTTAAGGCCAGTATTGAAGACCGTTGTTTTCTTGATTCTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
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| CDS GCA 90 bp | GTGTCGACGAAGCCTTCTCACACTCCTCATCGTAGCCTGTGTGGTTaGTGTTCAGTGGGCAGACAGACCACGGCAGGGGATCCTGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: VSTKPSHTPHRSLCG*CSVGRQTTAGDPGR Trigger: CCTTCCAGGATCCCCTGCCGTGGTCTGTCTGCCCACTGAACAGCAACCACACAGGCTACGATGAGGAGTGTGAGAAGGCTTCGTCGACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040960.13 ENSMUST00000170591.2 ENSMUST00000171647.9 |
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| CDS-3UTR CAA 90 bp | AAGCTCCCTAATCTTCTTTACAGACTCAGGAGGCCCCAGACCAGCACTCCAGCCATCTGCGTGGCTGCATaGATCCAGGCCTTGGGGTTG | + |
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Preference number: 5 (lower is better) Translates to: KLPNLLYRLRRPQTSTPAICVAA*IQALGL Trigger: CAACCCCAAGGCCTGGATCAATGCAGCCACGCAGAT...GGCTGGAGTGCTGGTCTGGGGCCTCCTGAGTCTGTAAAGAAGATTAGGGAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
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| CDS-3UTR CAA 90 bp | TCTTCTGCCAAGCTCCCTAATCTTCTTTACAGACTCAGGAGGCCCCAGACCAGCATCCAGGCCTTGGGGTaGGCTAGCTGTTCCATCTTA | + |
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Preference number: 5 (lower is better) Translates to: SSAKLPNLLYRLRRPQTSIQALG*ASCSIL Trigger: TAAGATGGAACAGCTAGCCAACCCCAAGGCCTGGAT...GCTGGTCTGGGGCCTCCTGAGTCTGTAAAGAAGATTAGGGAGCTTGGCAGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040960.13 |
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| CDS-3UTR CAA 90 bp | CTAATCTTCTTTACAGACTCAGGAGGCCCCAGACCAGCACTCCAGCCAAGAAGTGCTAGCTGTTCCATCTaGCCAGTAGATTCGGTGCCT | + |
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Preference number: 5 (lower is better) Translates to: LIFFTDSGGPRPALQPRSASCSI*PVDSVP Trigger: AGGCACCGAATCTACTGGCAAGATGGAACAGCTAGC...ACTTCTTGGCTGGAGTGCTGGTCTGGGGCCTCCTGAGTCTGTAAAGAAGATTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
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| CDS GCA 90 bp | AAGGCCACGGACCAAGTAGATAATAAGAACACAGTAAGGCATCGATaGGGTGAAGTAGACCACCTTGCCAGTAGATTCGGTGCCTCTCAG | + |
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Preference number: 5 (lower is better) Translates to: KATDQVDNKNTVRHR*GEVDHLASRFGASQ Trigger: CTGAGAGGCACCGAATCTACTGGCAAGGTGGTCTACTTCACCGCATCGATGCCTTACTGTGTTCTTATTATCTACTTGGTCCGTGGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000170591.2 |
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| CDS-3UTR CAA 90 bp | CTAATCTTCTTTACAGACTCAGGAGGCCCCAGACCAGCACTCCAGCCAAGAAGTATGGACGGTGAGATGTaGAGTGTTTTCCTGTACCAG | + |
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Preference number: 5 (lower is better) Translates to: LIFFTDSGGPRPALQPRSMDGEM*SVFLYQ Trigger: CTGGTACAGGAAAACACTCAACATCTCACCGTCCAT...ACTTCTTGGCTGGAGTGCTGGTCTGGGGCCTCCTGAGTCTGTAAAGAAGATTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
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| CDS-3UTR CAA 90 bp | GAAAATTTCTCTTCAGCCCTGCAAAAGGCCCTTCTAGTGCCCACATTTGCTATTAGTAGCATCCCAGGCTaGGTACTGCAGTGTTCCCGT | + |
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Preference number: 5 (lower is better) Translates to: ENFSSALQKALLVPTFAISSIPG*VLQCSR Trigger: ACGGGAACACTGCAGTACCAAGCCTGGGATGCTACT...AATAGCAAATGTGGGCACTAGAAGGGCCTTTTGCAGGGCTGAAGAGAAATTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
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| CDS-3UTR CAA 90 bp | CAACAAGGACAGGAGATGATGTTGAATCCCCTGGAACTGGAGTTGTTGGAGGTTATGGACGGTGAGATGTaGAGTGTTTTCCTGTACCAG | + |
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Preference number: 5 (lower is better) Translates to: QQGQEMMLNPLELELLEVMDGEM*SVFLYQ Trigger: CTGGTACAGGAAAACACTCAACATCTCACCGTCCAT...AACCTCCAACAACTCCAGTTCCAGGGGATTCAACATCATCTCCTGTCCTTGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
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| CDS-3UTR CAA 90 bp | GATTCAGAGAAAGGTGACTTCCATTGGAACCCCAGAAAAAGTCTCTTAGTATTAGCATTGATCCAGGCCTaGGGGTTGGCTAGCTGTTCC | + |
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Preference number: 5 (lower is better) Translates to: DSEKGDFHWNPRKSLLVLALIQA*GLASCS Trigger: GGAACAGCTAGCCAACCCCAAGGCCTGGATCAATGC...TAATACTAAGAGACTTTTTCTGGGGTTCCAATGGAAGTCACCTTTCTCTGAATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
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| CDS-3UTR CAA 90 bp | CAACAAGGACAGGAGATGATGTTGAATCCCCTGGAACTGGAGTTGTTGGAGGTTTCAAGGTCAAAAGAATaGGTCAGCAGCAGAATCACC | + |
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Preference number: 5 (lower is better) Translates to: QQGQEMMLNPLELELLEVSRSKE*VSSRIT Trigger: GGTGATTCTGCTGCTGACCAATTCTTTTGACCTTGA...AACCTCCAACAACTCCAGTTCCAGGGGATTCAACATCATCTCCTGTCCTTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
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| CDS-3UTR CAA 90 bp | GAGAAAGGTGACTTCCATTGGAACCCCAGAAAAAGTCTCTTAGTATTATATCCTAGTAGCATCCCAGGCTaGGTACTGCAGTGTTCCCGT | + |
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Preference number: 5 (lower is better) Translates to: EKGDFHWNPRKSLLVLYPSSIPG*VLQCSR Trigger: ACGGGAACACTGCAGTACCAAGCCTGGGATGCTACT...AGGATATAATACTAAGAGACTTTTTCTGGGGTTCCAATGGAAGTCACCTTTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
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| CDS-3UTR CAA 90 bp | GATTTCCCAATATGGATGTTAGGAACCAAATGTTGGTCCTCTGCAAATGTAGTAATCCAGGCCTTGGGGTaGGCTAGCTGTTCCATCTTG | + |
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Preference number: 5 (lower is better) Translates to: DFPIWMLGTKCWSSANVVIQALG*ASCSIL Trigger: CAAGATGGAACAGCTAGCCAACCCCAAGGCCTGGAT...TACTACATTTGCAGAGGACCAACATTTGGTTCCTAACATCCATATTGGGAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
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| CDS-3UTR CAA 90 bp | TCTTATGTTTTACAAACTGTGATCATTCTGAAACCAGGTATCAAGAAAAGCTGGATCTGCGTGGCTGCATaGATCCAGGCCTTGGGGTTG | + |
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Preference number: 5 (lower is better) Translates to: SYVLQTVIILKPGIKKSWICVAA*IQALGL Trigger: CAACCCCAAGGCCTGGATCAATGCAGCCACGCAGAT...CCAGCTTTTCTTGATACCTGGTTTCAGAATGATCACAGTTTGTAAAACATAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
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| CDS-3UTR CAA 90 bp | GAGAAAGGTGACTTCCATTGGAACCCCAGAAAAAGTCTCTTAGTATTATATCCTTTCACCTCCTCCAGGTaGCTGACTGTCAGAAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: EKGDFHWNPRKSLLVLYPFTSSR*LTVRKP Trigger: TGGCTTTCTGACAGTCAGCAACCTGGAGGAGGTGAA...AGGATATAATACTAAGAGACTTTTTCTGGGGTTCCAATGGAAGTCACCTTTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
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| CDS-3UTR CAA 90 bp | GATTCAGAGAAAGGTGACTTCCATTGGAACCCCAGAAAAAGTCTCTTAGTATTAATGTACATCAGGCCATaGGTGGCTCCATGGAGTGTA | + |
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Preference number: 5 (lower is better) Translates to: DSEKGDFHWNPRKSLLVLMYIRP*VAPWSV Trigger: TACACTCCATGGAGCCACCAATGGCCTGATGTACAT...TAATACTAAGAGACTTTTTCTGGGGTTCCAATGGAAGTCACCTTTCTCTGAATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040960.13 |
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| CDS-3UTR CAA 90 bp | CTAGAATCAAGAAAACAACGGTCTTCAATACTGGCCTTAACCTTTGATGACAAATTCACCTCCTCCAGGTaGCTGACTGTCAGAAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: LESRKQRSSILALTFDDKFTSSR*LTVRKP Trigger: TGGCTTTCTGACAGTCAGCAACCTGGAGGAGGTGAA...TTTGTCATCAAAGGTTAAGGCCAGTATTGAAGACCGTTGTTTTCTTGATTCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
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| CDS-3UTR CAA 90 bp | GATTCAGAGAAAGGTGACTTCCATTGGAACCCCAGAAAAAGTCTCTTAGTATTATCAAGGTCAAAAGAATaGGTCAGCAGCAGAATCACC | + |
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Preference number: 5 (lower is better) Translates to: DSEKGDFHWNPRKSLLVLSRSKE*VSSRIT Trigger: GGTGATTCTGCTGCTGACCAATTCTTTTGACCTTGA...TAATACTAAGAGACTTTTTCTGGGGTTCCAATGGAAGTCACCTTTCTCTGAATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
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| CDS CAA 90 bp | GGGGTAATCCTTGGTCACCAACTGCCCCTGAGTAGCATCCCAGGCTaGGTACTGCAGTGTTCCCGTGAGGATGTAGTCACTCAGGTAGAA | + |
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Preference number: 6 (lower is better) Translates to: GVILGHQLPLSSIPG*VLQCSREDVVTQVE Trigger: TTCTACCTGAGTGACTACATCCTCACGGGAACACTGCAGTACCAAGCCTGGGATGCTACTCAGGGGCAGTTGGTGACCAAGGATTACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
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| CDS CAA 72 bp | AAGATCTGCGTGGCTGCATTGATCCAGGCCTTGGGGTaGGCTAGCTGTTCCATCTTGCCAGTAGATTCGGTG | + |
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Preference number: 6 (lower is better) Translates to: KICVAALIQALG*ASCSILPVDSV Trigger: CACCGAATCTACTGGCAAGATGGAACAGCTAGCCAACCCCAAGGCCTGGATCAATGCAGCCACGCAGATCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171647.9 |
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| CDS CAA 72 bp | CCAGCCTCCATGGTGAACACCATGCCAACAGCACAGTaGATGAGGCATACCAAACCTGAAATGGCCTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: PASMVNTMPTAQ*MRHTKPEMASL Trigger: CAAGGAGGCCATTTCAGGTTTGGTATGCCTCATCAACTGTGCTGTTGGCATGGTGTTCACCATGGAGGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000171647.9 |
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| CDS CAA 72 bp | AAGATCTGCGTGGCTGCATTGATCCAGGCCTTGGGGTaGGCTAGCTGTTCCATCTTAGGTGTGAACATGTAC | + |
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Preference number: 6 (lower is better) Translates to: KICVAALIQALG*ASCSILGVNMY Trigger: GTACATGTTCACACCTAAGATGGAACAGCTAGCCAACCCCAAGGCCTGGATCAATGCAGCCACGCAGATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040960.13 ENSMUST00000170591.2 |
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