Pregenerated sensors for SLC6A19 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021565Ensembl transcript IDs: ENSMUST00000022048.6, ENSMUST00000124406.8
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTACTCAGGGAATCGGTGTGTAGAGAAGGGTGTAAGAGGGCTCCGTaGTTCAGCAGTAGGAGCCTCAGCTTTCTGGTGGGTGAGATGTGG | + |
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Preference number: 1 (lower is better) Translates to: VLRESVCREGCKRAP*FSSRSLSFLVGEMW Trigger: CCACATCTCACCCACCAGAAAGCTGAGGCTCCTACTGCTGAATCACGGAGCCCTCTTACACCCTTCTCTACACACCGATTCCCTGAGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| 3UTR TCA 90 bp | GAGGCTTCAGAGGCCCAGAGGAGGAACCCCCTGAAATTACTAGTGTaGGACTCTTCATATTCTCCCAGGGCCAACCCCCATCTTATGCCT | + |
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Preference number: 1 (lower is better) Translates to: EASEAQRRNPLKLLV*DSSYSPRANPHLMP Trigger: AGGCATAAGATGGGGGTTGGCCCTGGGAGAATATGAAGAGTCTCACACTAGTAATTTCAGGGGGTTCCTCCTCTGGGCCTCTGAAGCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| 3UTR CCA 90 bp | ACATACTCACCTCCTACCTTCCACTCAGAGGGAAGGAGACCAGACTaGGCCCTCCACATAATCACTTTTGGCTCTCTGCAGGGAAAGGTA | + |
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Preference number: 1 (lower is better) Translates to: TYSPPTFHSEGRRPD*ALHIITFGSLQGKV Trigger: TACCTTTCCCTGCAGAGAGCCAAAAGTGATTATGTGGAGGGCCCAGTCTGGTCTCCTTCCCTCTGAGTGGAAGGTAGGAGGTGAGTATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| 3UTR CCA 90 bp | TACAGCACACTCCAGGCACATGTCAGGCAGAGCAGGATCCACCACTaGATGGAGCCTGAGTCACTGATGGAAGTGGAGATATTAAGAGTC | + |
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Preference number: 1 (lower is better) Translates to: YSTLQAHVRQSRIHH*MEPESLMEVEILRV Trigger: GACTCTTAATATCTCCACTTCCATCAGTGACTCAGGCTCCATCCAGTGGTGGATCCTGCTCTGCCTGACATGTGCCTGGAGTGTGCTGTA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124406.8 |
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| 3UTR TCA 90 bp | GATTTACAGACTCATTCCCTCTTCATAAGTGTACAGAGTGGCCCCTaGTTCAGAAGAGAAGGGAAGGTCAGCTTGGCTGAGCAGCCAGCT | + |
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Preference number: 1 (lower is better) Translates to: DLQTHSLFISVQSGP*FRREGKVSLAEQPA Trigger: AGCTGGCTGCTCAGCCAAGCTGACCTTCCCTTCTCTTCTGAATCAGGGGCCACTCTGTACACTTATGAAGAGGGAATGAGTCTGTAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| 3UTR-3UTR GCA 90 bp | AGCCCTCACAGCAAGGGGCAGAGGGATGCCTGGGTAGTGACAGCATTACCAGGAATGGGTCCTGCATCTTaGTTCCTCCACACACCATCT | + |
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Preference number: 2 (lower is better) Translates to: SPHSKGQRDAWVVTALPGMGPAS*FLHTPS Trigger: AGATGGTGTGTGGAGGAAGCAAGATGCAGGACCCAT...TCCTGGTAATGCTGTCACTACCCAGGCATCCCTCTGCCCCTTGCTGTGAGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| 3UTR CAA 90 bp | GGACCAAAGACTTCTAGGCTTCAGTCACTGGGGTGCCCATTTTCCTaGGAGTGTTCTCAACAGCAGTGGCCACAGCTGAGTTACCCTGTA | + |
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Preference number: 2 (lower is better) Translates to: GPKTSRLQSLGCPFS*ECSQQQWPQLSYPV Trigger: TACAGGGTAACTCAGCTGTGGCCACTGCTGTTGAGAACACTCCAAGGAAAATGGGCACCCCAGTGACTGAAGCCTAGAAGTCTTTGGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| 3UTR-3UTR TCA 90 bp | CCATTTTCCTTGGAGTGTTCTCAACAGCAGTGGCCACAGCTGAGTTACCCTGTAGTACAGAGTGGCCCCTaGTTCAGAAGAGAAGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: PFSLECSQQQWPQLSYPVVQSGP*FRREGK Trigger: CTTCCCTTCTCTTCTGAATCAGGGGCCACTCTGTAC...TACAGGGTAACTCAGCTGTGGCCACTGCTGTTGAGAACACTCCAAGGAAAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| 3UTR-3UTR TCA 90 bp | CCCATTTTCCTTGGAGTGTTCTCAACAGCAGTGGCCACAGCTGAGTTACCCTGTTGTATCAGGTCTGACTaGGACAAGTCTTCTCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: PIFLGVFSTAVATAELPCCIRSD*DKSSQP Trigger: AGGCTGAGAAGACTTGTCTCAGTCAGACCTGATACA...ACAGGGTAACTCAGCTGTGGCCACTGCTGTTGAGAACACTCCAAGGAAAATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| 3UTR CAA 90 bp | TGGAGACATGAGTCCATAAGGCATGAACCAGAGAAATCAGAGAATTaGGTTGGCCTCCAGCAAGACCACACAGGACCAGAAAGGAATCTC | + |
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Preference number: 2 (lower is better) Translates to: WRHESIRHEPEKSEN*VGLQQDHTGPERNL Trigger: GAGATTCCTTTCTGGTCCTGTGTGGTCTTGCTGGAGGCCAACCAAATTCTCTGATTTCTCTGGTTCATGCCTTATGGACTCATGTCTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| 3UTR-3UTR TCA 90 bp | ATGGAGCCTGAGTCACTGATGGAAGTGGAGATATTAAGAGTCTCTCGGTACCAGCATGGCAGAGGTTCCTaGAAGGAGTTGAAGAAGTAC | + |
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Preference number: 2 (lower is better) Translates to: MEPESLMEVEILRVSRYQHGRGS*KELKKY Trigger: GTACTTCTTCAACTCCTTTCAGGAACCTCTGCCATG...CTGGTACCGAGAGACTCTTAATATCTCCACTTCCATCAGTGACTCAGGCTCCAT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124406.8 |
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| 3UTR-3UTR CCA 90 bp | AGTCTTCTCAGCCTTGTCAGTCCACCAGCTTCCTGTGCTTCTTACAGAGCAGAACCACATAATCACTTTTaGCTCTCTGCAGGGAAAGGT | + |
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Preference number: 2 (lower is better) Translates to: SLLSLVSPPASCASYRAEPHNHF*LSAGKG Trigger: ACCTTTCCCTGCAGAGAGCCAAAAGTGATTATGTGG...TTCTGCTCTGTAAGAAGCACAGGAAGCTGGTGGACTGACAAGGCTGAGAAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| 3UTR-3UTR TCA 90 bp | TCCTTGGAGTGTTCTCAACAGCAGTGGCCACAGCTGAGTTACCCTGTAACCCTCGTATACACATCTGTGTaGCATGAATACATGTATCTG | + |
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Preference number: 2 (lower is better) Translates to: SLECSQQQWPQLSYPVTLVYTSV*HEYMYL Trigger: CAGATACATGTATTCATGTCACACAGATGTGTATAC...GAGGGTTACAGGGTAACTCAGCTGTGGCCACTGCTGTTGAGAACACTCCAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| 3UTR-3UTR GCA 90 bp | GCCCACCACAGTTTCTTACCCTTTTCTGTGAGGATTTTCAGAAAGTCAAATTCACCTGGCTTCACTGACTaGCACAGGACCAAAGACTTC | + |
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Preference number: 2 (lower is better) Translates to: AHHSFLPFSVRIFRKSNSPGFTD*HRTKDF Trigger: GAAGTCTTTGGTCCTGTGGCAGTCAGTGAAGCCAGG...TGAATTTGACTTTCTGAAAATCCTCACAGAAAAGGGTAAGAAACTGTGGTGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| 3UTR-3UTR CCA 90 bp | CCCATTTTCCTTGGAGTGTTCTCAACAGCAGTGGCCACAGCTGAGTTACCCTGTCAATGTGTACAAAGATaGCATAGGCATGTACACATA | + |
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Preference number: 2 (lower is better) Translates to: PIFLGVFSTAVATAELPCQCVQR*HRHVHI Trigger: TATGTGTACATGCCTATGCCATCTTTGTACACATTG...ACAGGGTAACTCAGCTGTGGCCACTGCTGTTGAGAACACTCCAAGGAAAATGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| 3UTR CAA 90 bp | CAGTGGCCACAGCTGAGTTACCCTGTAACCCTCCTTTTCCAACATTaGGCTAAAGATTTACAGACTCATTCCCTCTTCATAAGTGTACAG | + |
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Preference number: 2 (lower is better) Translates to: QWPQLSYPVTLLFQH*AKDLQTHSLFISVQ Trigger: CTGTACACTTATGAAGAGGGAATGAGTCTGTAAATCTTTAGCCAAATGTTGGAAAAGGAGGGTTACAGGGTAACTCAGCTGTGGCCACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| 3UTR GCA 72 bp | ACCTCGGTCCAGCCCTCACAGCAAGGGGCAGAGGGATaGCTGGGTAGTGACAGCATTACCAGGAGCCAGGCC | + |
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Preference number: 3 (lower is better) Translates to: TSVQPSQQGAEG*LGSDSITRSQA Trigger: GGCCTGGCTCCTGGTAATGCTGTCACTACCCAGGCATCCCTCTGCCCCTTGCTGTGAGGGCTGGACCGAGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| 3UTR CCA 72 bp | CGGTCCAGCCCTCACAGCAAGGGGCAGAGGGATGCCTaGGTAGTGACAGCATTACCAGGAGCCAGGCCTGCA | + |
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Preference number: 3 (lower is better) Translates to: RSSPHSKGQRDA*VVTALPGARPA Trigger: TGCAGGCCTGGCTCCTGGTAATGCTGTCACTACCCAGGCATCCCTCTGCCCCTTGCTGTGAGGGCTGGACCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| 3UTR GCA 72 bp | TGCCTGGGTAGTGACAGCATTACCAGGAGCCAGGCCTaGAGCACATACTCACCTCCTACCTTCCACTCAGAG | + |
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Preference number: 3 (lower is better) Translates to: CLGSDSITRSQA*STYSPPTFHSE Trigger: CTCTGAGTGGAAGGTAGGAGGTGAGTATGTGCTGCAGGCCTGGCTCCTGGTAATGCTGTCACTACCCAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| 3UTR TCA 72 bp | GTAGGGAGGAGCAGACATAGCCCTCCCTGGCTTCACTaGCTGCCACAGGACCAAAGACTTCTAGGCTTCAGT | + |
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Preference number: 3 (lower is better) Translates to: VGRSRHSPPWLH*LPQDQRLLGFS Trigger: ACTGAAGCCTAGAAGTCTTTGGTCCTGTGGCAGTCAGTGAAGCCAGGGAGGGCTATGTCTGCTCCTCCCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| 3UTR CCA 72 bp | CCTCCTACCTTCCACTCAGAGGGAAGGAGACCAGACTaGGCCCTCCACATAATCACTTTTGGCTCTCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: PPTFHSEGRRPD*ALHIITFGSLQ Trigger: CTGCAGAGAGCCAAAAGTGATTATGTGGAGGGCCCAGTCTGGTCTCCTTCCCTCTGAGTGGAAGGTAGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| 3UTR TCA 72 bp | GAATCGGTGTGTAGAGAAGGGTGTAAGAGGGCTCCGTaGTTCAGCAGTAGGAGCCTCAGCTTTCTGGTGGGT | + |
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Preference number: 3 (lower is better) Translates to: ESVCREGCKRAP*FSSRSLSFLVG Trigger: ACCCACCAGAAAGCTGAGGCTCCTACTGCTGAATCACGGAGCCCTCTTACACCCTTCTCTACACACCGATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| 3UTR TCA 72 bp | GAGGCCCAGAGGAGGAACCCCCTGAAATTACTAGTGTaGGACTCTTCATATTCTCCCAGGGCCAACCCCCAT | + |
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Preference number: 3 (lower is better) Translates to: EAQRRNPLKLLV*DSSYSPRANPH Trigger: ATGGGGGTTGGCCCTGGGAGAATATGAAGAGTCTCACACTAGTAATTTCAGGGGGTTCCTCCTCTGGGCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| 3UTR CCA 72 bp | GGGTGCCCATTTTCCTTGGAGTGTTCTCAACAGCAGTaGCCACAGCTGAGTTACCCTGTAACCCTCCTTTTC | + |
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Preference number: 3 (lower is better) Translates to: GCPFSLECSQQQ*PQLSYPVTLLF Trigger: GAAAAGGAGGGTTACAGGGTAACTCAGCTGTGGCCACTGCTGTTGAGAACACTCCAAGGAAAATGGGCACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| 3UTR CCA 72 bp | CTGCCACAGGACCAAAGACTTCTAGGCTTCAGTCACTaGGGTGCCCATTTTCCTTGGAGTGTTCTCAACAGC | + |
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Preference number: 3 (lower is better) Translates to: LPQDQRLLGFSH*GAHFPWSVLNS Trigger: GCTGTTGAGAACACTCCAAGGAAAATGGGCACCCCAGTGACTGAAGCCTAGAAGTCTTTGGTCCTGTGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| 3UTR CCA 72 bp | AGCAGTAGGAGCCTCAGCTTTCTGGTGGGTGAGATGTaGCTGGTGTCACCAAATAGAAGGCACATGACTGGT | + |
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Preference number: 3 (lower is better) Translates to: SSRSLSFLVGEM*LVSPNRRHMTG Trigger: ACCAGTCATGTGCCTTCTATTTGGTGACACCAGCCACATCTCACCCACCAGAAAGCTGAGGCTCCTACTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| 3UTR-3UTR CAA 90 bp | CCATTTTCCTTGGAGTGTTCTCAACAGCAGTGGCCACAGCTGAGTTACCCTGTACATGGGTCCTGCATCTaGCTTCCTCCACACACCATC | + |
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Preference number: 3 (lower is better) Translates to: PFSLECSQQQWPQLSYPVHGSCI*LPPHTI Trigger: GATGGTGTGTGGAGGAAGCAAGATGCAGGACCCATG...TACAGGGTAACTCAGCTGTGGCCACTGCTGTTGAGAACACTCCAAGGAAAATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| 3UTR GCA 72 bp | ACAGGACCAAAGACTTCTAGGCTTCAGTCACTGGGGTaGCCATTTTCCTTGGAGTGTTCTCAACAGCAGTGG | + |
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Preference number: 3 (lower is better) Translates to: TGPKTSRLQSLG*PFSLECSQQQW Trigger: CCACTGCTGTTGAGAACACTCCAAGGAAAATGGGCACCCCAGTGACTGAAGCCTAGAAGTCTTTGGTCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| 3UTR TCA 72 bp | ACTCATTCCCTCTTCATAAGTGTACAGAGTGGCCCCTaGTTCAGAAGAGAAGGGAAGGTCAGCTTGGCTGAG | + |
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Preference number: 3 (lower is better) Translates to: THSLFISVQSGP*FRREGKVSLAE Trigger: CTCAGCCAAGCTGACCTTCCCTTCTCTTCTGAATCAGGGGCCACTCTGTACACTTATGAAGAGGGAATGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| 3UTR GCA 72 bp | ACTCTTCATATTCTCCCAGGGCCAACCCCCATCTTATaGCTCTGTATGGTTCTTAAGGTGATAGTACTCAGG | + |
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Preference number: 3 (lower is better) Translates to: TLHILPGPTPIL*LCMVLKVIVLR Trigger: CCTGAGTACTATCACCTTAAGAACCATACAGAGGCATAAGATGGGGGTTGGCCCTGGGAGAATATGAAGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| 3UTR CCA 72 bp | TTTACAGACTCATTCCCTCTTCATAAGTGTACAGAGTaGCCCCTGATTCAGAAGAGAAGGGAAGGTCAGCTT | + |
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Preference number: 3 (lower is better) Translates to: FTDSFPLHKCTE*PLIQKRREGQL Trigger: AAGCTGACCTTCCCTTCTCTTCTGAATCAGGGGCCACTCTGTACACTTATGAAGAGGGAATGAGTCTGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| 3UTR-3UTR CAA 90 bp | GAGGAACCCCCTGAAATTACTAGTGTGAGACTCTTCATATTCTCCCAGGGCCAACTCCTTTTCCAACATTaGGCTAAAGATTTACAGACT | + |
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Preference number: 3 (lower is better) Translates to: EEPPEITSVRLFIFSQGQLLFQH*AKDLQT Trigger: AGTCTGTAAATCTTTAGCCAAATGTTGGAAAAGGAG...TTGGCCCTGGGAGAATATGAAGAGTCTCACACTAGTAATTTCAGGGGGTTCCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS-3UTR TCA 90 bp | TTACAGAGCAGAAGAACCTCGGTCCAGCCCTCACAGCAAGGGGCAGAGGGATGCAGCTGGAGAAGGAGATaGGGCCCCCGAAGGCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: LQSRRTSVQPSQQGAEGCSWRRR*GPRRPV Trigger: CACTGGCCTTCGGGGGCCTCATCTCCTTCTCCAGCT...GCATCCCTCTGCCCCTTGCTGTGAGGGCTGGACCGAGGTTCTTCTGCTCTGTAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS-3UTR CCA 90 bp | CCAGGCCTGCAGCACATACTCACCTCCTACCTTCCACTCAGAGGGAAGGAGACCGAGCACCGACCACAGTaGGGACACTGGCATCTTCGT | + |
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Preference number: 4 (lower is better) Translates to: PGLQHILTSYLPLRGKETEHRPQ*GHWHLR Trigger: ACGAAGATGCCAGTGTCCCCACTGTGGTCGGTGCTC...GGTCTCCTTCCCTCTGAGTGGAAGGTAGGAGGTGAGTATGTGCTGCAGGCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS-3UTR GCA 90 bp | CAGGCCTGCAGCACATACTCACCTCCTACCTTCCACTCAGAGGGAAGGAGACCAGAAGACCTGAGCACCTaGATCCAGCCACGTGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: QACSTYSPPTFHSEGRRPEDLST*IQPRVG Trigger: CCCAACACGTGGCTGGATGCAGGTGCTCAGGTCTTC...TGGTCTCCTTCCCTCTGAGTGGAAGGTAGGAGGTGAGTATGTGCTGCAGGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS-3UTR GCA 90 bp | TTACAGAGCAGAAGAACCTCGGTCCAGCCCTCACAGCAAGGGGCAGAGGGATGCTCTCTGAAGTCACATTaGCCTCCGGCAGGTCGAACC | + |
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Preference number: 4 (lower is better) Translates to: LQSRRTSVQPSQQGAEGCSLKSH*PPAGRT Trigger: GGTTCGACCTGCCGGAGGGCAATGTGACTTCAGAGA...GCATCCCTCTGCCCCTTGCTGTGAGGGCTGGACCGAGGTTCTTCTGCTCTGTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS-3UTR CCA 90 bp | AGCCCTCACAGCAAGGGGCAGAGGGATGCCTGGGTAGTGACAGCATTACCAGGAAGCAGGATCCACCACTaGATGGAGCCTGAGTCACTG | + |
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Preference number: 4 (lower is better) Translates to: SPHSKGQRDAWVVTALPGSRIHH*MEPESL Trigger: CAGTGACTCAGGCTCCATCCAGTGGTGGATCCTGCT...TCCTGGTAATGCTGTCACTACCCAGGCATCCCTCTGCCCCTTGCTGTGAGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS-3UTR CCA 90 bp | TTACAGAGCAGAAGAACCTCGGTCCAGCCCTCACAGCAAGGGGCAGAGGGATGCCCACAGTGGGGACACTaGCATCTTCGTGATGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: LQSRRTSVQPSQQGAEGCPQWGH*HLRDGF Trigger: GAAGCCATCACGAAGATGCCAGTGTCCCCACTGTGG...GCATCCCTCTGCCCCTTGCTGTGAGGGCTGGACCGAGGTTCTTCTGCTCTGTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS-3UTR TCA 90 bp | CTTCTTACAGAGCAGAAGAACCTCGGTCCAGCCCTCACAGCAAGGGGCAGAGGGAAAAGCCCACACAGGTaGGCATGTACTGGGCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: LLTEQKNLGPALTARGRGKSPHR*ACTGPC Trigger: ACAAGGCCCAGTACATGCTCACCTGTGTGGGCTTTT...CCCTCTGCCCCTTGCTGTGAGGGCTGGACCGAGGTTCTTCTGCTCTGTAAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS-3UTR CCA 90 bp | CCTCGGTCCAGCCCTCACAGCAAGGGGCAGAGGGATGCCTGGGTAGTGACAGCAAAGATGTTGGGCTTATaGCCGATCATGAACTCGATG | + |
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Preference number: 4 (lower is better) Translates to: PRSSPHSKGQRDAWVVTAKMLGL*PIMNSM Trigger: CATCGAGTTCATGATCGGCCATAAGCCCAACATCTT...TGCTGTCACTACCCAGGCATCCCTCTGCCCCTTGCTGTGAGGGCTGGACCGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS-3UTR TCA 90 bp | CCCATTTTCCTTGGAGTGTTCTCAACAGCAGTGGCCACAGCTGAGTTACCCTGTGCCCCCGAAGGCCAGTaGGAAGGAGTAGAAGACCTG | + |
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Preference number: 4 (lower is better) Translates to: PIFLGVFSTAVATAELPCAPEGQ*EGVEDL Trigger: CAGGTCTTCTACTCCTTCTCACTGGCCTTCGGGGGC...ACAGGGTAACTCAGCTGTGGCCACTGCTGTTGAGAACACTCCAAGGAAAATGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS-3UTR GCA 90 bp | AGAAGTAGTCCACGGAAGAGCTCTTGGCACACTCTTCCACATAGCCTGTCTGGTCACCCATGCTGCCCTTaGGTAGCCTCCTCCATGGCT | + |
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Preference number: 4 (lower is better) Translates to: RSSPRKSSWHTLPHSLSGHPCCP*VASSMA Trigger: AGCCATGGAGGAGGCTACGCAAGGGCAGCATGGGTG...ACCAGACAGGCTATGTGGAAGAGTGTGCCAAGAGCTCTTCCGTGGACTACTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124406.8 |
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| CDS-3UTR TCA 90 bp | AGCTTCCTGTGCTTCTTACAGAGCAGAAGAACCTCGGTCCAGCCCTCACAGCAACCACTGGATGGAGCCTaGGTCACTGATGGAAGTGGA | + |
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Preference number: 4 (lower is better) Translates to: SFLCFLQSRRTSVQPSQQPLDGA*VTDGSG Trigger: TCCACTTCCATCAGTGACTCAGGCTCCATCCAGTGG...TTGCTGTGAGGGCTGGACCGAGGTTCTTCTGCTCTGTAAGAAGCACAGGAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS-3UTR TCA 90 bp | CCATTTTCCTTGGAGTGTTCTCAACAGCAGTGGCCACAGCTGAGTTACCCTGTAAGGGCAGGGTGGAGGTaGTGTACACAGCCTTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PFSLECSQQQWPQLSYPVRAGWR*CTQPSQ Trigger: CTGGGAAGGCTGTGTACATCACCTCCACCCTGCCCT...TACAGGGTAACTCAGCTGTGGCCACTGCTGTTGAGAACACTCCAAGGAAAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS-3UTR TCA 90 bp | TTACAGAGCAGAAGAACCTCGGTCCAGCCCTCACAGCAAGGGGCAGAGGGATGCGAGTCAAGCCACGGATaGGAAAGATGGTCAGTACAA | + |
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Preference number: 4 (lower is better) Translates to: LQSRRTSVQPSQQGAEGCESSHG*ERWSVQ Trigger: TTGTACTGACCATCTTTCTCATCCGTGGCTTGACTC...GCATCCCTCTGCCCCTTGCTGTGAGGGCTGGACCGAGGTTCTTCTGCTCTGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS-3UTR CCA 90 bp | TTTTCCTTGGAGTGTTCTCAACAGCAGTGGCCACAGCTGAGTTACCCTGTAACCCCCTTCAGAGCAGGGTaGATGGAGCTCCACACACCC | + |
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Preference number: 4 (lower is better) Translates to: FSLECSQQQWPQLSYPVTPFRAG*MELHTP Trigger: GGGTGTGTGGAGCTCCATCCACCCTGCTCTGAAGGG...GGTTACAGGGTAACTCAGCTGTGGCCACTGCTGTTGAGAACACTCCAAGGAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS-3UTR CCA 90 bp | CCAGGCCTGCAGCACATACTCACCTCCTACCTTCCACTCAGAGGGAAGGAGACCAGAGAGAGCCAGTACTaGCCCGAATTCAGTGTGAAA | + |
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Preference number: 4 (lower is better) Translates to: PGLQHILTSYLPLRGKETRESQY*PEFSVK Trigger: TTTCACACTGAATTCGGGCCAGTACTGGCTCTCTCT...GGTCTCCTTCCCTCTGAGTGGAAGGTAGGAGGTGAGTATGTGCTGCAGGCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS-3UTR TCA 90 bp | CCATTTTCCTTGGAGTGTTCTCAACAGCAGTGGCCACAGCTGAGTTACCCTGTATGGCTCGGAAGCCAATaGTGGAGTAGACCACGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PFSLECSQQQWPQLSYPVWLGSQ*WSRPRW Trigger: CCACCGTGGTCTACTCCATCATTGGCTTCCGAGCCA...TACAGGGTAACTCAGCTGTGGCCACTGCTGTTGAGAACACTCCAAGGAAAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS-3UTR CCA 90 bp | TCCTTGGAGTGTTCTCAACAGCAGTGGCCACAGCTGAGTTACCCTGTAACCCTCCAGAAGGATGAGGAATaGGATCATGAAGGCCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLECSQQQWPQLSYPVTLQKDEE*DHEGPS Trigger: GGAGGGGCCTTCATGATCCCATTCCTCATCCTTCTG...GAGGGTTACAGGGTAACTCAGCTGTGGCCACTGCTGTTGAGAACACTCCAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS-3UTR CCA 90 bp | TCCTTGGAGTGTTCTCAACAGCAGTGGCCACAGCTGAGTTACCCTGTAACCCTCGTAGCCTCTGACCGATaGCAAACTCCAGGTACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLECSQQQWPQLSYPVTLVASDR*QTPGTA Trigger: TGCTGTACCTGGAGTTTGCCATCGGTCAGAGGCTAC...GAGGGTTACAGGGTAACTCAGCTGTGGCCACTGCTGTTGAGAACACTCCAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS-3UTR CCA 90 bp | CCATTTTCCTTGGAGTGTTCTCAACAGCAGTGGCCACAGCTGAGTTACCCTGTATCAGAGCAGGGTGGATaGAGCTCCACACACCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: PFSLECSQQQWPQLSYPVSEQGG*SSTHPC Trigger: GCATGGGTGTGTGGAGCTCCATCCACCCTGCTCTGA...TACAGGGTAACTCAGCTGTGGCCACTGCTGTTGAGAACACTCCAAGGAAAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS-3UTR CCA 90 bp | TTTTCCTTGGAGTGTTCTCAACAGCAGTGGCCACAGCTGAGTTACCCTGTAACCTGGCAAAGCAGGGGATaGAGAGGCAGGGTACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FSLECSQQQWPQLSYPVTWQSRG*RGRVLQ Trigger: CTGGAGTACCCTGCCTCTCCATCCCCTGCTTTGCCA...GGTTACAGGGTAACTCAGCTGTGGCCACTGCTGTTGAGAACACTCCAAGGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| 3UTR CAA 72 bp | ACTTCTAGGCTTCAGTCACTGGGGTGCCCATTTTCCTaGGAGTGTTCTCAACAGCAGTGGCCACAGCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TSRLQSLGCPFS*ECSQQQWPQLS Trigger: ACTCAGCTGTGGCCACTGCTGTTGAGAACACTCCAAGGAAAATGGGCACCCCAGTGACTGAAGCCTAGAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS-3UTR TCA 90 bp | AGAAGTAGTCCACGGAAGAGCTCTTGGCACACTCTTCCACATAGCCTGTCTGGTAAAAGCCCACACAGGTaGGCATGTACTGGGCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RSSPRKSSWHTLPHSLSGKSPHR*ACTGPC Trigger: ACAAGGCCCAGTACATGCTCACCTGTGTGGGCTTTT...ACCAGACAGGCTATGTGGAAGAGTGTGCCAAGAGCTCTTCCGTGGACTACTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124406.8 |
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| CDS-3UTR TCA 90 bp | TCCTTGGAGTGTTCTCAACAGCAGTGGCCACAGCTGAGTTACCCTGTAACCCTCCTGTCTGGTTCTGGTTaGGTGGACATTCACTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SLECSQQQWPQLSYPVTLLSGSG*VDIHSM Trigger: CATGGAGTGAATGTCCACTCAACCAGAACCAGACAG...GAGGGTTACAGGGTAACTCAGCTGTGGCCACTGCTGTTGAGAACACTCCAAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
||
| CDS-3UTR CCA 90 bp | ATGGAGCCTGAGTCACTGATGGAAGTGGAGATATTAAGAGTCTCTCGGTACCAGCCTTGTTGTCCCATTTaGGCCTGGAGCCGGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: MEPESLMEVEILRVSRYQPCCPI*AWSRPL Trigger: AAGAGGCCGGCTCCAGGCCCAAATGGGACAACAAGG...CTGGTACCGAGAGACTCTTAATATCTCCACTTCCATCAGTGACTCAGGCTCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124406.8 |
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| CDS-3UTR TCA 90 bp | CCATTTTCCTTGGAGTGTTCTCAACAGCAGTGGCCACAGCTGAGTTACCCTGTACTGTGGACAGTGTATTaGCCAGCCCATGGTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PFSLECSQQQWPQLSYPVLWTVY*PAHGGH Trigger: ATGACCACCATGGGCTGGTCAATACACTGTCCACAG...TACAGGGTAACTCAGCTGTGGCCACTGCTGTTGAGAACACTCCAAGGAAAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
||
| CDS-3UTR CCA 90 bp | AGCTTCCTGTGCTTCTTACAGAGCAGAAGAACCTCGGTCCAGCCCTCACAGCAACACCCAGTTGGGGTATaGAATCTTCTGAGATTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SFLCFLQSRRTSVQPSQQHPVGV*NLLRFR Trigger: CCGAAATCTCAGAAGATTCCATACCCCAACTGGGTG...TTGCTGTGAGGGCTGGACCGAGGTTCTTCTGCTCTGTAAGAAGCACAGGAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
||
| CDS-3UTR TCA 90 bp | TTTTCCTTGGAGTGTTCTCAACAGCAGTGGCCACAGCTGAGTTACCCTGTAACCCATGGCAGAGGTTCCTaGAAGGAGTTGAAGAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: FSLECSQQQWPQLSYPVTHGRGS*KELKKY Trigger: GTACTTCTTCAACTCCTTTCAGGAACCTCTGCCATG...GGTTACAGGGTAACTCAGCTGTGGCCACTGCTGTTGAGAACACTCCAAGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS-3UTR TCA 90 bp | CCATTTTCCTTGGAGTGTTCTCAACAGCAGTGGCCACAGCTGAGTTACCCTGTAATGTCCCCAAGCAGATaGGGCCTGTCAACAATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PFSLECSQQQWPQLSYPVMSPSR*GLSTIL Trigger: AAGAATTGTTGACAGGCCTCATCTGCTTGGGGACAT...TACAGGGTAACTCAGCTGTGGCCACTGCTGTTGAGAACACTCCAAGGAAAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
||
| CDS-3UTR GCA 90 bp | CCATTTTCCTTGGAGTGTTCTCAACAGCAGTGGCCACAGCTGAGTTACCCTGTAACTCTCCACGTGACTTaGCAGAAGATGTTGGGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: PFSLECSQQQWPQLSYPVTLHVT*QKMLGL Trigger: TAAGCCCAACATCTTCTGGCAAGTCACGTGGAGAGT...TACAGGGTAACTCAGCTGTGGCCACTGCTGTTGAGAACACTCCAAGGAAAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
||
| CDS-3UTR CCA 90 bp | CCATTTTCCTTGGAGTGTTCTCAACAGCAGTGGCCACAGCTGAGTTACCCTGTACTGCATACACCCAGTTaGGGTATGGAATCTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PFSLECSQQQWPQLSYPVLHTPS*GMESSE Trigger: CTCAGAAGATTCCATACCCCAACTGGGTGTATGCAG...TACAGGGTAACTCAGCTGTGGCCACTGCTGTTGAGAACACTCCAAGGAAAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| 3UTR CAA 72 bp | GAGTCCATAAGGCATGAACCAGAGAAATCAGAGAATTaGGTTGGCCTCCAGCAAGACCACACAGGACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ESIRHEPEKSEN*VGLQQDHTGPE Trigger: TTCTGGTCCTGTGTGGTCTTGCTGGAGGCCAACCAAATTCTCTGATTTCTCTGGTTCATGCCTTATGGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS-3UTR TCA 90 bp | GAGCCTGAGTCACTGATGGAAGTGGAGATATTAAGAGTCTCTCGGTACCAGAAGCCTCTTCCTTTTCAATaGCCTCTAACTCATCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EPESLMEVEILRVSRYQKPLPFQ*PLTHPE Trigger: CTCTGGATGAGTTAGAGGTCATTGAAAAGGAAGAGG...CTTCTGGTACCGAGAGACTCTTAATATCTCCACTTCCATCAGTGACTCAGGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124406.8 |
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| CDS-3UTR GCA 90 bp | GAGGAACCCCCTGAAATTACTAGTGTGAGACTCTTCATATTCTCCCAGGGCCAACTGAAACTTCAGTTGTaGATAGGCCTGGGGATTAGT | + |
|
Preference number: 4 (lower is better) Translates to: EEPPEITSVRLFIFSQGQLKLQL*IGLGIS Trigger: ACTAATCCCCAGGCCTATGCACAACTGAAGTTTCAG...TTGGCCCTGGGAGAATATGAAGAGTCTCACACTAGTAATTTCAGGGGGTTCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS-3UTR TCA 90 bp | TTTTCCTTGGAGTGTTCTCAACAGCAGTGGCCACAGCTGAGTTACCCTGTAACCTGGTCATCAGACTTCTaGCAACAATTTCTGATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FSLECSQQQWPQLSYPVTWSSDF*QQFLMN Trigger: GTTCATCAGAAATTGTTGTCAGAAGTCTGATGACCA...GGTTACAGGGTAACTCAGCTGTGGCCACTGCTGTTGAGAACACTCCAAGGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS-3UTR CCA 90 bp | AGTGGTAGGCACTTCCATCAAGAGCATGTAAAAATATTTTCACATGTGTGCAATCCTTGTTGTCCCATTTaGGCCTGGAGCCGGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SGRHFHQEHVKIFSHVCNPCCPI*AWSRPL Trigger: AAGAGGCCGGCTCCAGGCCCAAATGGGACAACAAGG...ATTGCACACATGTGAAAATATTTTTACATGCTCTTGATGGAAGTGCCTACCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS-3UTR TCA 90 bp | GCCCACCACAGTTTCTTACCCTTTTCTGTGAGGATTTTCAGAAAGTCAAATTCAGGGTATGGAATCTTCTaGGATTTCGGGAACTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AHHSFLPFSVRIFRKSNSGYGIF*DFGNSS Trigger: TGAGGAGTTCCCGAAATCTCAGAAGATTCCATACCC...TGAATTTGACTTTCTGAAAATCCTCACAGAAAAGGGTAAGAAACTGTGGTGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS-3UTR GCA 90 bp | AGTGGTAGGCACTTCCATCAAGAGCATGTAAAAATATTTTCACATGTGTGCAATCACAGTGACCACAACTaGATACACCCAGTTGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SGRHFHQEHVKIFSHVCNHSDHN*IHPVGV Trigger: TACCCCAACTGGGTGTATGCAGTTGTGGTCACTGTG...ATTGCACACATGTGAAAATATTTTTACATGCTCTTGATGGAAGTGCCTACCACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS-3UTR TCA 90 bp | AGTGGTAGGCACTTCCATCAAGAGCATGTAAAAATATTTTCACATGTGTGCAATCCTCTTCCTTTTCAATaGCCTCTAACTCATCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SGRHFHQEHVKIFSHVCNPLPFQ*PLTHPE Trigger: CTCTGGATGAGTTAGAGGTCATTGAAAAGGAAGAGG...ATTGCACACATGTGAAAATATTTTTACATGCTCTTGATGGAAGTGCCTACCACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS CCA 90 bp | ACACGAACATGGAGGCGATGCCTATACCCTTCAGAGCAGGGTGGATaGAGCTCCACACACCCATGCTGCCCTTGCGTAGCCTCTGACCGA | + |
|
Preference number: 5 (lower is better) Translates to: TRTWRRCLYPSEQGG*SSTHPCCPCVASDR Trigger: TCGGTCAGAGGCTACGCAAGGGCAGCATGGGTGTGTGGAGCTCCATCCACCCTGCTCTGAAGGGTATAGGCATCGCCTCCATGTTCGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS TCA 90 bp | GGGTGGATGGAGCTCCACACACCCATGCTGCCCTTGCGTAGCCTCTaGCCGATGGCAAACTCCAGGTACAGCAAAGGAATTCCCTCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GWMELHTPMLPLRSL*PMANSRYSKGIPSN Trigger: GTTCGAGGGAATTCCTTTGCTGTACCTGGAGTTTGCCATCGGTCAGAGGCTACGCAAGGGCAGCATGGGTGTGTGGAGCTCCATCCACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS-3UTR CAA 90 bp | CCAGGCCTGCAGCACATACTCACCTCCTACCTTCCACTCAGAGGGAAGGAGACCATGTACTGGGCCTTGTaGTCCCATTTGGGCCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PGLQHILTSYLPLRGKETMYWAL*SHLGLE Trigger: CTCCAGGCCCAAATGGGACAACAAGGCCCAGTACAT...GGTCTCCTTCCCTCTGAGTGGAAGGTAGGAGGTGAGTATGTGCTGCAGGCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS CCA 90 bp | TGGAGCTCCACACACCCATGCTGCCCTTGCGTAGCCTCTGACCGATaGCAAACTCCAGGTACAGCAAAGGAATTCCCTCGAACACCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: WSSTHPCCPCVASDR*QTPGTAKEFPRTPE Trigger: TTCTGGTGTTCGAGGGAATTCCTTTGCTGTACCTGGAGTTTGCCATCGGTCAGAGGCTACGCAAGGGCAGCATGGGTGTGTGGAGCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS-3UTR CAA 90 bp | AGTCTTCTCAGCCTTGTCAGTCCACCAGCTTCCTGTGCTTCTTACAGAGCAGAAGCCTTGTTGTCCCATTaGGGCCTGGAGCCGGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLLSLVSPPASCASYRAEALLSH*GLEPAS Trigger: AGAGGCCGGCTCCAGGCCCAAATGGGACAACAAGGC...TTCTGCTCTGTAAGAAGCACAGGAAGCTGGTGGACTGACAAGGCTGAGAAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS-3UTR CAA 90 bp | CTTCTTACAGAGCAGAAGAACCTCGGTCCAGCCCTCACAGCAAGGGGCAGAGGGACTTGCCAGAAGATGTaGGGCTTATGGCCGATCATG | + |
|
Preference number: 5 (lower is better) Translates to: LLTEQKNLGPALTARGRGTCQKM*GLWPIM Trigger: CATGATCGGCCATAAGCCCAACATCTTCTGGCAAGT...CCCTCTGCCCCTTGCTGTGAGGGCTGGACCGAGGTTCTTCTGCTCTGTAAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS-3UTR CAA 90 bp | GAGCCTGAGTCACTGATGGAAGTGGAGATATTAAGAGTCTCTCGGTACCAGAAGGCCTTGTTGTCCCATTaGGGCCTGGAGCCGGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: EPESLMEVEILRVSRYQKALLSH*GLEPAS Trigger: AGAGGCCGGCTCCAGGCCCAAATGGGACAACAAGGC...CTTCTGGTACCGAGAGACTCTTAATATCTCCACTTCCATCAGTGACTCAGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124406.8 |
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| CDS-3UTR CAA 90 bp | TCCTTGGAGTGTTCTCAACAGCAGTGGCCACAGCTGAGTTACCCTGTAACCCTCGCTGTGGACAGTGTATaGACCAGCCCATGGTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLECSQQQWPQLSYPVTLAVDSV*TSPWWS Trigger: TGACCACCATGGGCTGGTCAATACACTGTCCACAGC...GAGGGTTACAGGGTAACTCAGCTGTGGCCACTGCTGTTGAGAACACTCCAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS TCA 90 bp | GGGATTAGTGGCATTGCACCACTGTTGGTAGGCCTCAAAGTTCTCTaGAGTCACATTGCCCTCCGGCAGGTCGAACCCATTGATGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GISGIAPLLVGLKVL*SHIALRQVEPIDEG Trigger: ACCCTCATCAATGGGTTCGACCTGCCGGAGGGCAATGTGACTTCAGAGAACTTTGAGGCCTACCAACAGTGGTGCAATGCCACTAATCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
||
| CDS TCA 90 bp | CCATCTCACAATTATTGTGCACAGAGTTGTAGCTGGAGAAGGAGATaGGGCCCCCGAAGGCCAGTGAGAAGGAGTAGAAGACCTGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PSHNYCAQSCSWRRR*GPRRPVRRSRRPEH Trigger: GTGCTCAGGTCTTCTACTCCTTCTCACTGGCCTTCGGGGGCCTCATCTCCTTCTCCAGCTACAACTCTGTGCACAATAATTGTGAGATGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS CCA 90 bp | AGAGGAATGGAGCCAGCAAAGCTGTCCAGGAGAGAGAGCCAGTACTaGCCCGAATTCAGTGTGAAAATGAAGGCGATGAGATATGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: RGMEPAKLSRRESQY*PEFSVKMKAMRYVP Trigger: GGGGACATATCTCATCGCCTTCATTTTCACACTGAATTCGGGCCAGTACTGGCTCTCTCTCCTGGACAGCTTTGCTGGCTCCATTCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS TCA 90 bp | GTCAACAATTCTTTGGGCCACTTCTTAGGGGTGATATTGAGGTCCTaGAGGGGTACGACCACACCCTCCATGTTCCCAAACATGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VNNSLGHFLGVILRS*RGTTTPSMFPNMEE Trigger: CTCCTCCATGTTTGGGAACATGGAGGGTGTGGTCGTACCCCTTCAGGACCTCAATATCACCCCTAAGAAGTGGCCCAAAGAATTGTTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS GCA 90 bp | AAGATGACCAGCATGATCAGTGGACTGACCACTCTCCACGTGACTTaGCAGAAGATGTTGGGCTTATGGCCGATCATGAACTCGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KMTSMISGLTTLHVT*QKMLGLWPIMNSMS Trigger: GGACATCGAGTTCATGATCGGCCATAAGCCCAACATCTTCTGGCAAGTCACGTGGAGAGTGGTCAGTCCACTGATCATGCTGGTCATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS CCA 90 bp | GGACTGACCACTCTCCACGTGACTTGCCAGAAGATGTTGGGCTTATaGCCGATCATGAACTCGATGTCCTTGTTGAACCTGTCAACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GLTTLHVTCQKMLGL*PIMNSMSLLNLSTP Trigger: TGGAGTTGACAGGTTCAACAAGGACATCGAGTTCATGATCGGCCATAAGCCCAACATCTTCTGGCAAGTCACGTGGAGAGTGGTCAGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS-3UTR CAA 90 bp | GAGCCTGAGTCACTGATGGAAGTGGAGATATTAAGAGTCTCTCGGTACCAGAAGATGTACTGGGCCTTGTaGTCCCATTTGGGCCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: EPESLMEVEILRVSRYQKMYWAL*SHLGLE Trigger: CTCCAGGCCCAAATGGGACAACAAGGCCCAGTACAT...CTTCTGGTACCGAGAGACTCTTAATATCTCCACTTCCATCAGTGACTCAGGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124406.8 |
||
| CDS-3UTR CAA 90 bp | CCATTTTCCTTGGAGTGTTCTCAACAGCAGTGGCCACAGCTGAGTTACCCTGTACACTCTCCACGTGACTaGCCAGAAGATGTTGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PFSLECSQQQWPQLSYPVHSPRD*PEDVGL Trigger: AAGCCCAACATCTTCTGGCAAGTCACGTGGAGAGTG...TACAGGGTAACTCAGCTGTGGCCACTGCTGTTGAGAACACTCCAAGGAAAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
||
| CDS TCA 90 bp | CAACTCCATACACGTAGACGACGGCAAACATCTCACAAAAGGCGATaGTTAGCAGAGGAATGGAGCCAGCAAAGCTGTCCAGGAGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QLHTRRRRQTSHKRR*LAEEWSQQSCPGER Trigger: TCTCTCTCCTGGACAGCTTTGCTGGCTCCATTCCTCTGCTAATCATCGCCTTTTGTGAGATGTTTGCCGTCGTCTACGTGTATGGAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
||
| CDS CCA 90 bp | TACTCCAGCCACAGTGACCACAACTGCATACACCCAGTTGGGGTATaGAATCTTCTGAGATTTCGGGAACTCCTCATAGTTAGGGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: YSSHSDHNCIHPVGV*NLLRFRELLIVRVP Trigger: TGGGACCCTAACTATGAGGAGTTCCCGAAATCTCAGAAGATTCCATACCCCAACTGGGTGTATGCAGTTGTGGTCACTGTGGCTGGAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
||
| CDS GCA 90 bp | CTCAGAAAGGAAGCTGTTAATGTCACAGGTCTGAAACTTCAGTTGTaGATAGGCCTGGGGATTAGTGGCATTGCACCACTGTTGGTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LRKEAVNVTGLKLQL*IGLGISGIAPLLVG Trigger: GCCTACCAACAGTGGTGCAATGCCACTAATCCCCAGGCCTATGCACAACTGAAGTTTCAGACCTGTGACATTAACAGCTTCCTTTCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
||
| CDS-3UTR CAA 90 bp | CATAAGTGTACAGAGTGGCCCCTGATTCAGAAGAGAAGGGAAGGTCAGCTTGGCACAGATGTGAAGCCATaGATGACAGACACGATCACA | + |
|
Preference number: 5 (lower is better) Translates to: HKCTEWPLIQKRREGQLGTDVKP*MTDTIT Trigger: TGTGATCGTGTCTGTCATCAATGGCTTCACATCTGT...GCCAAGCTGACCTTCCCTTCTCTTCTGAATCAGGGGCCACTCTGTACACTTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
||
| CDS-3UTR CAA 90 bp | AGTCTTCTCAGCCTTGTCAGTCCACCAGCTTCCTGTGCTTCTTACAGAGCAGAAAACTCGATGTCCTTGTaGAACCTGTCAACTCCATAC | + |
|
Preference number: 5 (lower is better) Translates to: SLLSLVSPPASCASYRAENSMSL*NLSTPY Trigger: GTATGGAGTTGACAGGTTCAACAAGGACATCGAGTT...TTCTGCTCTGTAAGAAGCACAGGAAGCTGGTGGACTGACAAGGCTGAGAAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
||
| CDS-3UTR CAA 90 bp | AGTCTTCTCAGCCTTGTCAGTCCACCAGCTTCCTGTGCTTCTTACAGAGCAGAAATGAACTCGATGTCCTaGTTGAACCTGTCAACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLLSLVSPPASCASYRAEMNSMS*LNLSTP Trigger: TGGAGTTGACAGGTTCAACAAGGACATCGAGTTCAT...TTCTGCTCTGTAAGAAGCACAGGAAGCTGGTGGACTGACAAGGCTGAGAAGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
||
| CDS-3UTR CAA 90 bp | GAGGAACCCCCTGAAATTACTAGTGTGAGACTCTTCATATTCTCCCAGGGCCAACTCAGCTCTGTGATATaGGGTGTGAAAAGGAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: EEPPEITSVRLFIFSQGQLSSVI*GVKRKT Trigger: TGTCTTCCTTTTCACACCCAATATCACAGAGCTGAG...TTGGCCCTGGGAGAATATGAAGAGTCTCACACTAGTAATTTCAGGGGGTTCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS-3UTR CAA 90 bp | GCCCACCACAGTTTCTTACCCTTTTCTGTGAGGATTTTCAGAAAGTCAAATTCAGGCAGGTCGAACCCATaGATGAGGGTCAGGATGTTC | + |
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Preference number: 5 (lower is better) Translates to: AHHSFLPFSVRIFRKSNSGRSNP*MRVRMF Trigger: GAACATCCTGACCCTCATCAATGGGTTCGACCTGCC...TGAATTTGACTTTCTGAAAATCCTCACAGAAAAGGGTAAGAAACTGTGGTGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS-3UTR CAA 90 bp | AGTGGTAGGCACTTCCATCAAGAGCATGTAAAAATATTTTCACATGTGTGCAATCCTGTCTGGTTCTGGTaGAGTGGACATTCACTCCAT | + |
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Preference number: 5 (lower is better) Translates to: SGRHFHQEHVKIFSHVCNPVWFW*SGHSLH Trigger: ATGGAGTGAATGTCCACTCAACCAGAACCAGACAGG...ATTGCACACATGTGAAAATATTTTTACATGCTCTTGATGGAAGTGCCTACCACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS CCA 72 bp | TGGAGGCGATGCCTATACCCTTCAGAGCAGGGTGGATaGAGCTCCACACACCCATGCTGCCCTTGCGTAGCC | + |
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Preference number: 6 (lower is better) Translates to: WRRCLYPSEQGG*SSTHPCCPCVA Trigger: GGCTACGCAAGGGCAGCATGGGTGTGTGGAGCTCCATCCACCCTGCTCTGAAGGGTATAGGCATCGCCTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS TCA 72 bp | AGCAGGGGATGGAGAGGCAGGGTACTCCAGCCACAGTaGCCACAACTGCATACACCCAGTTGGGGTATGGAA | + |
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Preference number: 6 (lower is better) Translates to: SRGWRGRVLQPQ*PQLHTPSWGME Trigger: TTCCATACCCCAACTGGGTGTATGCAGTTGTGGTCACTGTGGCTGGAGTACCCTGCCTCTCCATCCCCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS CAA 90 bp | CCCTCCGGCAGGTCGAACCCATTGATGAGGGTCAGGATGTTCGTGTaGACACAGTCATCAAAGCGCTCAGTGGCTCGGAAGCCAATGATG | + |
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Preference number: 6 (lower is better) Translates to: PSGRSNPLMRVRMFV*TQSSKRSVARKPMM Trigger: CATCATTGGCTTCCGAGCCACTGAGCGCTTTGATGACTGTGTCAACACGAACATCCTGACCCTCATCAATGGGTTCGACCTGCCGGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS TCA 72 bp | GAGCTCCACACACCCATGCTGCCCTTGCGTAGCCTCTaGCCGATGGCAAACTCCAGGTACAGCAAAGGAATT | + |
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Preference number: 6 (lower is better) Translates to: ELHTPMLPLRSL*PMANSRYSKGI Trigger: AATTCCTTTGCTGTACCTGGAGTTTGCCATCGGTCAGAGGCTACGCAAGGGCAGCATGGGTGTGTGGAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS TCA 72 bp | TGCCGTTGGTGGCACCCTTCAGAGTCAAGCCACGGATaGGAAAGATGGTCAGTACAACATAGGGCAGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: CRWWHPSESSHG*ERWSVQHRAGW Trigger: CCACCCTGCCCTATGTTGTACTGACCATCTTTCTCATCCGTGGCTTGACTCTGAAGGGTGCCACCAACGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS TCA 72 bp | CACAGTCATCAAAGCGCTCAGTGGCTCGGAAGCCAATaGTGGAGTAGACCACGGTGGCCGCATACACAGATG | + |
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Preference number: 6 (lower is better) Translates to: HSHQSAQWLGSQ*WSRPRWPHTQM Trigger: CATCTGTGTATGCGGCCACCGTGGTCTACTCCATCATTGGCTTCCGAGCCACTGAGCGCTTTGATGACTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS CAA 90 bp | GCACCTGCATCCAGCCACGTGTTGGGGTTGCTCAGCTCTGTGATATaGGGTGTGAAAAGGAAGACAATGCCGTTGGTGGCACCCTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: APASSHVLGLLSSVI*GVKRKTMPLVAPFR Trigger: TCTGAAGGGTGCCACCAACGGCATTGTCTTCCTTTTCACACCCAATATCACAGAGCTGAGCAACCCCAACACGTGGCTGGATGCAGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS TCA 72 bp | CCCATTTGGGCCTGGAGCCGGCCTCTTCCTTTTCAATaGCCTCTAACTCATCCAGAGATGGAATCCGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: PIWAWSRPLPFQ*PLTHPEMESAP Trigger: AGGAGCGGATTCCATCTCTGGATGAGTTAGAGGTCATTGAAAAGGAAGAGGCCGGCTCCAGGCCCAAATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022048.6 ENSMUST00000124406.8 |
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| CDS TCA 72 bp | GAAAGATGGTCAGTACAACATAGGGCAGGGTGGAGGTaGTGTACACAGCCTTCCCAGTGGTCTCGATGCCAC | + |
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Preference number: 6 (lower is better) Translates to: ERWSVQHRAGWR*CTQPSQWSRCH Trigger: GTGGCATCGAGACCACTGGGAAGGCTGTGTACATCACCTCCACCCTGCCCTATGTTGTACTGACCATCTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS TCA 72 bp | GGCATTGCACCACTGTTGGTAGGCCTCAAAGTTCTCTaGAGTCACATTGCCCTCCGGCAGGTCGAACCCATT | + |
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Preference number: 6 (lower is better) Translates to: GIAPLLVGLKVL*SHIALRQVEPI Trigger: AATGGGTTCGACCTGCCGGAGGGCAATGTGACTTCAGAGAACTTTGAGGCCTACCAACAGTGGTGCAATGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS GCA 72 bp | GGAGAGGCAGGGTACTCCAGCCACAGTGACCACAACTaGATACACCCAGTTGGGGTATGGAATCTTCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: GEAGYSSHSDHN*IHPVGVWNLLR Trigger: TCTCAGAAGATTCCATACCCCAACTGGGTGTATGCAGTTGTGGTCACTGTGGCTGGAGTACCCTGCCTCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS TCA 72 bp | TCTTTGGGCCACTTCTTAGGGGTGATATTGAGGTCCTaGAGGGGTACGACCACACCCTCCATGTTCCCAAAC | + |
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Preference number: 6 (lower is better) Translates to: SLGHFLGVILRS*RGTTTPSMFPN Trigger: GTTTGGGAACATGGAGGGTGTGGTCGTACCCCTTCAGGACCTCAATATCACCCCTAAGAAGTGGCCCAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS CCA 72 bp | GAGCCAGCAAAGCTGTCCAGGAGAGAGAGCCAGTACTaGCCCGAATTCAGTGTGAAAATGAAGGCGATGAGA | + |
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Preference number: 6 (lower is better) Translates to: EPAKLSRRESQY*PEFSVKMKAMR Trigger: TCTCATCGCCTTCATTTTCACACTGAATTCGGGCCAGTACTGGCTCTCTCTCCTGGACAGCTTTGCTGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS CAA 72 bp | TCCAGCCACGTGTTGGGGTTGCTCAGCTCTGTGATATaGGGTGTGAAAAGGAAGACAATGCCGTTGGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: SSHVLGLLSSVI*GVKRKTMPLVA Trigger: TGCCACCAACGGCATTGTCTTCCTTTTCACACCCAATATCACAGAGCTGAGCAACCCCAACACGTGGCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS CAA 72 bp | AGGTCGAACCCATTGATGAGGGTCAGGATGTTCGTGTaGACACAGTCATCAAAGCGCTCAGTGGCTCGGAAG | + |
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Preference number: 6 (lower is better) Translates to: RSNPLMRVRMFV*TQSSKRSVARK Trigger: CTTCCGAGCCACTGAGCGCTTTGATGACTGTGTCAACACGAACATCCTGACCCTCATCAATGGGTTCGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS CAA 72 bp | TCTGAAGTCACATTGCCCTCCGGCAGGTCGAACCCATaGATGAGGGTCAGGATGTTCGTGTTGACACAGTCA | + |
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Preference number: 6 (lower is better) Translates to: SEVTLPSGRSNP*MRVRMFVLTQS Trigger: TGACTGTGTCAACACGAACATCCTGACCCTCATCAATGGGTTCGACCTGCCGGAGGGCAATGTGACTTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS CAA 72 bp | GGACTGACCACTCTCCACGTGACTTGCCAGAAGATGTaGGGCTTATGGCCGATCATGAACTCGATGTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: GLTTLHVTCQKM*GLWPIMNSMSL Trigger: CAAGGACATCGAGTTCATGATCGGCCATAAGCCCAACATCTTCTGGCAAGTCACGTGGAGAGTGGTCAGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS CAA 90 bp | TCAAAGTTCTCTGAAGTCACATTGCCCTCCGGCAGGTCGAACCCATaGATGAGGGTCAGGATGTTCGTGTTGACACAGTCATCAAAGCGC | + |
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Preference number: 6 (lower is better) Translates to: SKFSEVTLPSGRSNP*MRVRMFVLTQSSKR Trigger: GCGCTTTGATGACTGTGTCAACACGAACATCCTGACCCTCATCAATGGGTTCGACCTGCCGGAGGGCAATGTGACTTCAGAGAACTTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS CAA 90 bp | GAAGATGACCAGCATGATCAGTGGACTGACCACTCTCCACGTGACTaGCCAGAAGATGTTGGGCTTATGGCCGATCATGAACTCGATGTC | + |
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Preference number: 6 (lower is better) Translates to: EDDQHDQWTDHSPRD*PEDVGLMADHELDV Trigger: GACATCGAGTTCATGATCGGCCATAAGCCCAACATCTTCTGGCAAGTCACGTGGAGAGTGGTCAGTCCACTGATCATGCTGGTCATCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS GCA 72 bp | AGCATGATCAGTGGACTGACCACTCTCCACGTGACTTaGCAGAAGATGTTGGGCTTATGGCCGATCATGAAC | + |
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Preference number: 6 (lower is better) Translates to: SMISGLTTLHVT*QKMLGLWPIMN Trigger: GTTCATGATCGGCCATAAGCCCAACATCTTCTGGCAAGTCACGTGGAGAGTGGTCAGTCCACTGATCATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS CAA 72 bp | CAGCATGATCAGTGGACTGACCACTCTCCACGTGACTaGCCAGAAGATGTTGGGCTTATGGCCGATCATGAA | + |
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Preference number: 6 (lower is better) Translates to: QHDQWTDHSPRD*PEDVGLMADHE Trigger: TTCATGATCGGCCATAAGCCCAACATCTTCTGGCAAGTCACGTGGAGAGTGGTCAGTCCACTGATCATGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS CAA 90 bp | ATGATCAGTGGACTGACCACTCTCCACGTGACTTGCCAGAAGATGTaGGGCTTATGGCCGATCATGAACTCGATGTCCTTGTTGAACCTG | + |
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Preference number: 6 (lower is better) Translates to: MISGLTTLHVTCQKM*GLWPIMNSMSLLNL Trigger: CAGGTTCAACAAGGACATCGAGTTCATGATCGGCCATAAGCCCAACATCTTCTGGCAAGTCACGTGGAGAGTGGTCAGTCCACTGATCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS GCA 72 bp | GAAGCTGTTAATGTCACAGGTCTGAAACTTCAGTTGTaGATAGGCCTGGGGATTAGTGGCATTGCACCACTG | + |
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Preference number: 6 (lower is better) Translates to: EAVNVTGLKLQL*IGLGISGIAPL Trigger: CAGTGGTGCAATGCCACTAATCCCCAGGCCTATGCACAACTGAAGTTTCAGACCTGTGACATTAACAGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS CAA 90 bp | ACCCTCAGAAAGGAAGCTGTTAATGTCACAGGTCTGAAACTTCAGTaGTGCATAGGCCTGGGGATTAGTGGCATTGCACCACTGTTGGTA | + |
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Preference number: 6 (lower is better) Translates to: TLRKEAVNVTGLKLQ*CIGLGISGIAPLLV Trigger: TACCAACAGTGGTGCAATGCCACTAATCCCCAGGCCTATGCACAACTGAAGTTTCAGACCTGTGACATTAACAGCTTCCTTTCTGAGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS CCA 72 bp | CACAGTGACCACAACTGCATACACCCAGTTGGGGTATaGAATCTTCTGAGATTTCGGGAACTCCTCATAGTT | + |
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Preference number: 6 (lower is better) Translates to: HSDHNCIHPVGV*NLLRFRELLIV Trigger: AACTATGAGGAGTTCCCGAAATCTCAGAAGATTCCATACCCCAACTGGGTGTATGCAGTTGTGGTCACTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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| CDS CAA 72 bp | AAGGAAGCTGTTAATGTCACAGGTCTGAAACTTCAGTaGTGCATAGGCCTGGGGATTAGTGGCATTGCACCA | + |
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Preference number: 6 (lower is better) Translates to: KEAVNVTGLKLQ*CIGLGISGIAP Trigger: TGGTGCAATGCCACTAATCCCCAGGCCTATGCACAACTGAAGTTTCAGACCTGTGACATTAACAGCTTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022048.6 |
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