Pregenerated sensors for SLC6A16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000094152Ensembl transcript IDs: ENSMUST00000179310.4, ENSMUST00000213347.2
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAGCCAGGAATGTGCTGCAAAGCCAGCGGGCCCCACAGCTCTGCTaGCCTGAGCAATCCAGGCTGGTGATCGCTTTAAGCTGCTGTTCA | + |
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Preference number: 1 (lower is better) Translates to: PARNVLQSQRAPQLC*PEQSRLVIALSCCS Trigger: TGAACAGCAGCTTAAAGCGATCACCAGCCTGGATTGCTCAGGGCAGCAGAGCTGTGGGGCCCGCTGGCTTTGCAGCACATTCCTGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| 3UTR GCA 90 bp | GGGGATGCACTGTATGACAATGGAAGATCCCAGCCAGGAATGTGCTaGAAAGCCAGCGGGCCCCACAGCTCTGCTGCCCTGAGCAATCCA | + |
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Preference number: 1 (lower is better) Translates to: GDALYDNGRSQPGMC*KASGPHSSAALSNP Trigger: TGGATTGCTCAGGGCAGCAGAGCTGTGGGGCCCGCTGGCTTTGCAGCACATTCCTGGCTGGGATCTTCCATTGTCATACAGTGCATCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| 3UTR GCA 90 bp | CAGGAGACTCTCAGACCAGGAGCAGGGCTGGCAGGACAACCTCGGTaGACTGAGCGAGGGTCTGGGGATGCACTGTATGACAATGGAAGA | + |
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Preference number: 1 (lower is better) Translates to: QETLRPGAGLAGQPR*TERGSGDALYDNGR Trigger: TCTTCCATTGTCATACAGTGCATCCCCAGACCCTCGCTCAGTGCACCGAGGTTGTCCTGCCAGCCCTGCTCCTGGTCTGAGAGTCTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| 3UTR GCA 90 bp | TCTGGGGATGCACTGTATGACAATGGAAGATCCCAGCCAGGAATGTaGTGCAAAGCCAGCGGGCCCCACAGCTCTGCTGCCCTGAGCAAT | + |
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Preference number: 1 (lower is better) Translates to: SGDALYDNGRSQPGM*CKASGPHSSAALSN Trigger: ATTGCTCAGGGCAGCAGAGCTGTGGGGCCCGCTGGCTTTGCAGCACATTCCTGGCTGGGATCTTCCATTGTCATACAGTGCATCCCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| 3UTR GCA 90 bp | CAGCTCTGCTGCCCTGAGCAATCCAGGCTGGTGATCGCTTTAAGCTaGTGTTCAGAGCTGCCTCTTTGGTCTGCTGTAAGAGATGCAAGA | + |
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Preference number: 1 (lower is better) Translates to: QLCCPEQSRLVIALS*CSELPLWSAVRDAR Trigger: TCTTGCATCTCTTACAGCAGACCAAAGAGGCAGCTCTGAACAGCAGCTTAAAGCGATCACCAGCCTGGATTGCTCAGGGCAGCAGAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| 3UTR-3UTR GCA 90 bp | CACCGTGCAGGAGACTCTCAGACCAGGAGCAGGGCTGGCAGGACAACCTCGGTGTCCCAGCCAGGAATGTaGTGCAAAGCCAGCGGGCCC | + |
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Preference number: 2 (lower is better) Translates to: HRAGDSQTRSRAGRTTSVSQPGM*CKASGP Trigger: GGGCCCGCTGGCTTTGCAGCACATTCCTGGCTGGGA...CACCGAGGTTGTCCTGCCAGCCCTGCTCCTGGTCTGAGAGTCTCCTGCACGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| 3UTR CAA 90 bp | ATCCAGGCTGGTGATCGCTTTAAGCTGCTGTTCAGAGCTGCCTCTTaGGTCTGCTGTAAGAGATGCAAGATGTCTGGCCTAATGAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: IQAGDRFKLLFRAAS*VCCKRCKMSGLMRE Trigger: TTCCCTCATTAGGCCAGACATCTTGCATCTCTTACAGCAGACCAAAGAGGCAGCTCTGAACAGCAGCTTAAAGCGATCACCAGCCTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| 3UTR CCA 72 bp | TCACCGTGCAGGAGACTCTCAGACCAGGAGCAGGGCTaGCAGGACAACCTCGGTGCACTGAGCGAGGGTCTG | + |
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Preference number: 3 (lower is better) Translates to: SPCRRLSDQEQG*QDNLGALSEGL Trigger: CAGACCCTCGCTCAGTGCACCGAGGTTGTCCTGCCAGCCCTGCTCCTGGTCTGAGAGTCTCCTGCACGGTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| 3UTR TCA 72 bp | GCTGCAAAGCCAGCGGGCCCCACAGCTCTGCTGCCCTaGGCAATCCAGGCTGGTGATCGCTTTAAGCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: AAKPAGPTALLP*AIQAGDRFKLL Trigger: CAGCAGCTTAAAGCGATCACCAGCCTGGATTGCTCAGGGCAGCAGAGCTGTGGGGCCCGCTGGCTTTGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| 3UTR GCA 72 bp | CTCAGACCAGGAGCAGGGCTGGCAGGACAACCTCGGTaGACTGAGCGAGGGTCTGGGGATGCACTGTATGAC | + |
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Preference number: 3 (lower is better) Translates to: LRPGAGLAGQPR*TERGSGDALYD Trigger: GTCATACAGTGCATCCCCAGACCCTCGCTCAGTGCACCGAGGTTGTCCTGCCAGCCCTGCTCCTGGTCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| 3UTR GCA 72 bp | TTTATTAGCCAGCAGCCCCACCCTTCCCCGTCACCGTaGAGGAGACTCTCAGACCAGGAGCAGGGCTGGCAG | + |
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Preference number: 3 (lower is better) Translates to: FISQQPHPSPSP*RRLSDQEQGWQ Trigger: CTGCCAGCCCTGCTCCTGGTCTGAGAGTCTCCTGCACGGTGACGGGGAAGGGTGGGGCTGCTGGCTAATAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| 3UTR-3UTR CAA 90 bp | GTGCTGCAAAGCCAGCGGGCCCCACAGCTCTGCTGCCCTGAGCAATCCAGGCTGTTCAGAGCTGCCTCTTaGGTCTGCTGTAAGAGATGC | + |
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Preference number: 3 (lower is better) Translates to: VLQSQRAPQLCCPEQSRLFRAAS*VCCKRC Trigger: GCATCTCTTACAGCAGACCAAAGAGGCAGCTCTGAA...CAGCCTGGATTGCTCAGGGCAGCAGAGCTGTGGGGCCCGCTGGCTTTGCAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| 3UTR GCA 72 bp | CTGTATGACAATGGAAGATCCCAGCCAGGAATGTGCTaGAAAGCCAGCGGGCCCCACAGCTCTGCTGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: LYDNGRSQPGMC*KASGPHSSAAL Trigger: CAGGGCAGCAGAGCTGTGGGGCCCGCTGGCTTTGCAGCACATTCCTGGCTGGGATCTTCCATTGTCATACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| 3UTR GCA 72 bp | GCACTGTATGACAATGGAAGATCCCAGCCAGGAATGTaGTGCAAAGCCAGCGGGCCCCACAGCTCTGCTGCC | + |
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Preference number: 3 (lower is better) Translates to: ALYDNGRSQPGM*CKASGPHSSAA Trigger: GGCAGCAGAGCTGTGGGGCCCGCTGGCTTTGCAGCACATTCCTGGCTGGGATCTTCCATTGTCATACAGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| 3UTR GCA 72 bp | CTGTTCAGAGCTGCCTCTTTGGTCTGCTGTAAGAGATaGAAGATGTCTGGCCTAATGAGGGAAGTTGGGGGC | + |
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Preference number: 3 (lower is better) Translates to: LFRAASLVCCKR*KMSGLMREVGG Trigger: GCCCCCAACTTCCCTCATTAGGCCAGACATCTTGCATCTCTTACAGCAGACCAAAGAGGCAGCTCTGAACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| 3UTR GCA 72 bp | TGCCCTGAGCAATCCAGGCTGGTGATCGCTTTAAGCTaGTGTTCAGAGCTGCCTCTTTGGTCTGCTGTAAGA | + |
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Preference number: 3 (lower is better) Translates to: CPEQSRLVIALS*CSELPLWSAVR Trigger: TCTTACAGCAGACCAAAGAGGCAGCTCTGAACAGCAGCTTAAAGCGATCACCAGCCTGGATTGCTCAGGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| 3UTR GCA 72 bp | CGCTTTAAGCTGCTGTTCAGAGCTGCCTCTTTGGTCTaGTGTAAGAGATGCAAGATGTCTGGCCTAATGAGG | + |
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Preference number: 3 (lower is better) Translates to: RFKLLFRAASLV*CKRCKMSGLMR Trigger: CCTCATTAGGCCAGACATCTTGCATCTCTTACAGCAGACCAAAGAGGCAGCTCTGAACAGCAGCTTAAAGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS-3UTR CCA 90 bp | GATCCCAGCCAGGAATGTGCTGCAAAGCCAGCGGGCCCCACAGCTCTGCTGCCCTGTACTCAACCTTGCTaGCCCAGAGCTGCCGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: DPSQECAAKPAGPTALLPCTQPC*PRAAGE Trigger: CTCCCCGGCAGCTCTGGGCCAGCAAGGTTGAGTACA...GGGCAGCAGAGCTGTGGGGCCCGCTGGCTTTGCAGCACATTCCTGGCTGGGATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS-3UTR CCA 90 bp | TCACCGTGCAGGAGACTCTCAGACCAGGAGCAGGGCTGGCAGGACAACCTCGGTGGCGCTCCTCAAGGGTaGGGGAAGGCTGCTGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: SPCRRLSDQEQGWQDNLGGAPQG*GKAAEP Trigger: TGGCTCAGCAGCCTTCCCCCACCCTTGAGGAGCGCC...ACCGAGGTTGTCCTGCCAGCCCTGCTCCTGGTCTGAGAGTCTCCTGCACGGTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS-3UTR TCA 90 bp | GTGCTGCAAAGCCAGCGGGCCCCACAGCTCTGCTGCCCTGAGCAATCCAGGCTGATGCAGGGATGGGCATaGGGACAAAGACAGTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: VLQSQRAPQLCCPEQSRLMQGWA*GQRQSA Trigger: GGCTGACTGTCTTTGTCCTCATGCCCATCCCTGCAT...CAGCCTGGATTGCTCAGGGCAGCAGAGCTGTGGGGCCCGCTGGCTTTGCAGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS-3UTR TCA 90 bp | GTGCTGCAAAGCCAGCGGGCCCCACAGCTCTGCTGCCCTGAGCAATCCAGGCTGCTGTGCAATCCAGGTTaGTGGAGACCAGGTCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: VLQSQRAPQLCCPEQSRLLCNPG*WRPGQH Trigger: ATGCTGACCTGGTCTCCATCAACCTGGATTGCACAG...CAGCCTGGATTGCTCAGGGCAGCAGAGCTGTGGGGCCCGCTGGCTTTGCAGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS-3UTR GCA 90 bp | GATCCCAGCCAGGAATGTGCTGCAAAGCCAGCGGGCCCCACAGCTCTGCTGCCCCCACCTCTTTGGAAGTaGTTGAGTCCCAGGCAAAGT | + |
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Preference number: 4 (lower is better) Translates to: DPSQECAAKPAGPTALLPPPLWK*LSPRQS Trigger: ACTTTGCCTGGGACTCAAGCACTTCCAAAGAGGTGG...GGGCAGCAGAGCTGTGGGGCCCGCTGGCTTTGCAGCACATTCCTGGCTGGGATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS-3UTR TCA 90 bp | CCGTGCAGGAGACTCTCAGACCAGGAGCAGGGCTGGCAGGACAACCTCGGTGCAAGGGAATCCCCAGGGTaGGGCAGTATACAAAGTATG | + |
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Preference number: 4 (lower is better) Translates to: PCRRLSDQEQGWQDNLGARESPG*GSIQSM Trigger: CATACTTTGTATACTGCCTCACCCTGGGGATTCCCT...TGCACCGAGGTTGTCCTGCCAGCCCTGCTCCTGGTCTGAGAGTCTCCTGCACGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS-3UTR TCA 90 bp | TCACCGTGCAGGAGACTCTCAGACCAGGAGCAGGGCTGGCAGGACAACCTCGGTCTCTTTGGAAGTGCTTaGGTCCCAGGCAAAGTAGAC | + |
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Preference number: 4 (lower is better) Translates to: SPCRRLSDQEQGWQDNLGLFGSA*VPGKVD Trigger: GTCTACTTTGCCTGGGACTCAAGCACTTCCAAAGAG...ACCGAGGTTGTCCTGCCAGCCCTGCTCCTGGTCTGAGAGTCTCCTGCACGGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS-3UTR GCA 90 bp | GGTGCTGCAGTGACTGATTTATTAGCCAGCAGCCCCACCCTTCCCCGTCACCGTGAGGGTAGCCTTCACTaGTCTCCCTGCTCATCCTGT | + |
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Preference number: 4 (lower is better) Translates to: GAAVTDLLASSPTLPRHREGSLH*SPCSSC Trigger: ACAGGATGAGCAGGGAGAGCAGTGAAGGCTACCCTC...ACGGTGACGGGGAAGGGTGGGGCTGCTGGCTAATAAATCAGTCACTGCAGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS-3UTR CCA 90 bp | AGATGCAAGATGTCTGGCCTAATGAGGGAAGTTGGGGGCTCTGCTGACAGGCTCCACAGCCAGAGAAAATaGGCCGGCCCAGCAGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: RCKMSGLMREVGGSADRLHSQRK*AGPAEP Trigger: TGGCTCTGCTGGGCCGGCCCATTTTCTCTGGCTGTG...GAGCCTGTCAGCAGAGCCCCCAACTTCCCTCATTAGGCCAGACATCTTGCATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS-3UTR TCA 90 bp | CAGGCTGGTGATCGCTTTAAGCTGCTGTTCAGAGCTGCCTCTTTGGTCTGCTGTCTCTGCTGTGCCCTCTaGCCAACTGCCATCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: QAGDRFKLLFRAASLVCCLCCAL*PTAISR Trigger: CCTGGAGATGGCAGTTGGTCAGAGGGCACAGCAGAG...ACAGCAGACCAAAGAGGCAGCTCTGAACAGCAGCTTAAAGCGATCACCAGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS-3UTR TCA 90 bp | GATCCCAGCCAGGAATGTGCTGCAAAGCCAGCGGGCCCCACAGCTCTGCTGCCCCCAAGAAAGCACAAATaGGACAGAAGGACAGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: DPSQECAAKPAGPTALLPPRKHK*DRRTER Trigger: TCTTTCTGTCCTTCTGTCTCATTTGTGCTTTCTTGG...GGGCAGCAGAGCTGTGGGGCCCGCTGGCTTTGCAGCACATTCCTGGCTGGGATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS-3UTR GCA 90 bp | GGTGCTGCAGTGACTGATTTATTAGCCAGCAGCCCCACCCTTCCCCGTCACCGTCTTCACTGCTCTCCCTaGTCATCCTGTTCACCAACT | + |
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Preference number: 4 (lower is better) Translates to: GAAVTDLLASSPTLPRHRLHCSP*SSCSPT Trigger: AGTTGGTGAACAGGATGAGCAGGGAGAGCAGTGAAG...ACGGTGACGGGGAAGGGTGGGGCTGCTGGCTAATAAATCAGTCACTGCAGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS-3UTR GCA 90 bp | GCAATCCAGGCTGGTGATCGCTTTAAGCTGCTGTTCAGAGCTGCCTCTTTGGTCCGCACTGCTCTGCTGTaGCCTCTGACCAACTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: AIQAGDRFKLLFRAASLVRTALL*PLTNCH Trigger: ATGGCAGTTGGTCAGAGGGCACAGCAGAGCAGTGCG...GACCAAAGAGGCAGCTCTGAACAGCAGCTTAAAGCGATCACCAGCCTGGATTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS-3UTR CCA 90 bp | CAAAGCCAGCGGGCCCCACAGCTCTGCTGCCCTGAGCAATCCAGGCTGGTGATCCAGGATCAAAGTTACTaGAATTCCTTTGTAAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: QSQRAPQLCCPEQSRLVIQDQSY*NSFVRD Trigger: GTCCCTTACAAAGGAATTCCAGTAACTTTGATCCTG...GATCACCAGCCTGGATTGCTCAGGGCAGCAGAGCTGTGGGGCCCGCTGGCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS-3UTR TCA 90 bp | TTTAAGCTGCTGTTCAGAGCTGCCTCTTTGGTCTGCTGTAAGAGATGCAAGATGAGGGTCTCCCAGGCCTaGGCCTTTGCCATCCGAGTC | + |
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Preference number: 4 (lower is better) Translates to: FKLLFRAASLVCCKRCKMRVSQA*AFAIRV Trigger: GACTCGGATGGCAAAGGCTCAGGCCTGGGAGACCCT...CATCTTGCATCTCTTACAGCAGACCAAAGAGGCAGCTCTGAACAGCAGCTTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS-3UTR GCA 90 bp | CAGGCTGGTGATCGCTTTAAGCTGCTGTTCAGAGCTGCCTCTTTGGTCTGCTGTTGCCCTCTGACCAACTaGCATCTCCAGGAAGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: QAGDRFKLLFRAASLVCCCPLTN*HLQEEK Trigger: CTTCTCTTCCTGGAGATGGCAGTTGGTCAGAGGGCA...ACAGCAGACCAAAGAGGCAGCTCTGAACAGCAGCTTAAAGCGATCACCAGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS-3UTR GCA 90 bp | CTGGTGATCGCTTTAAGCTGCTGTTCAGAGCTGCCTCTTTGGTCTGCTGTAAGAACCTCGGCTGTCTCCTaGAGAAGGGGAAGGTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: LVIALSCCSELPLWSAVRTSAVS*RRGRCP Trigger: AGGACACCTTCCCCTTCTGCAGGAGACAGCCGAGGT...TCTTACAGCAGACCAAAGAGGCAGCTCTGAACAGCAGCTTAAAGCGATCACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS-3UTR CCA 90 bp | TCTGGTGCTGCAGTGACTGATTTATTAGCCAGCAGCCCCACCCTTCCCCGTCACCAGCAATCAGGATCTTaGACCACTCTGGGAAAACAC | + |
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Preference number: 4 (lower is better) Translates to: SGAAVTDLLASSPTLPRHQQSGS*TTLGKH Trigger: GTGTTTTCCCAGAGTGGTCCAAGATCCTGATTGCTG...GTGACGGGGAAGGGTGGGGCTGCTGGCTAATAAATCAGTCACTGCAGCACCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS-3UTR CCA 90 bp | GGTGATCGCTTTAAGCTGCTGTTCAGAGCTGCCTCTTTGGTCTGCTGTAAGAGAGCCTCCTTTGTAGACTaGAGCTGGCCACTGCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: GDRFKLLFRAASLVCCKRASFVD*SWPLPS Trigger: ACTGGGCAGTGGCCAGCTCCAGTCTACAAAGGAGGC...TCTCTTACAGCAGACCAAAGAGGCAGCTCTGAACAGCAGCTTAAAGCGATCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS-3UTR TCA 90 bp | GCAATCCAGGCTGGTGATCGCTTTAAGCTGCTGTTCAGAGCTGCCTCTTTGGTCTTCCATATTGGACTCTaGAGCCTGAGGCACATCCGA | + |
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Preference number: 4 (lower is better) Translates to: AIQAGDRFKLLFRAASLVFHIGL*SLRHIR Trigger: TCGGATGTGCCTCAGGCTTCAGAGTCCAATATGGAA...GACCAAAGAGGCAGCTCTGAACAGCAGCTTAAAGCGATCACCAGCCTGGATTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS-3UTR TCA 90 bp | GATCGCTTTAAGCTGCTGTTCAGAGCTGCCTCTTTGGTCTGCTGTAAGAGATGCCTGCAGCTTCCTTTGTaGACCCAGCCTGAGGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: DRFKLLFRAASLVCCKRCLQLPL*TQPEAK Trigger: CTTTGCCTCAGGCTGGGTTCACAAAGGAAGCTGCAG...GCATCTCTTACAGCAGACCAAAGAGGCAGCTCTGAACAGCAGCTTAAAGCGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS-3UTR CCA 90 bp | CTGGTGATCGCTTTAAGCTGCTGTTCAGAGCTGCCTCTTTGGTCTGCTGTAAGATTTGTAGACTGGAGCTaGCCACTGCCCAGTGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: LVIALSCCSELPLWSAVRFVDWS*PLPSGS Trigger: GCTACCACTGGGCAGTGGCCAGCTCCAGTCTACAAA...TCTTACAGCAGACCAAAGAGGCAGCTCTGAACAGCAGCTTAAAGCGATCACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS-3UTR GCA 90 bp | TTTAAGCTGCTGTTCAGAGCTGCCTCTTTGGTCTGCTGTAAGAGATGCAAGATGTCCACATGTCCGCACTaGTCTGCTGTGCCCTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: FKLLFRAASLVCCKRCKMSTCPH*SAVPSD Trigger: GTCAGAGGGCACAGCAGAGCAGTGCGGACATGTGGA...CATCTTGCATCTCTTACAGCAGACCAAAGAGGCAGCTCTGAACAGCAGCTTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS-3UTR TCA 90 bp | GGTGATCGCTTTAAGCTGCTGTTCAGAGCTGCCTCTTTGGTCTGCTGTAAGAGACGATGGAGAAGCTCTTaGCTTGGAAGGTTCATTCTC | + |
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Preference number: 4 (lower is better) Translates to: GDRFKLLFRAASLVCCKRRWRSS*LGRFIL Trigger: GAGAATGAACCTTCCAAGTCAAGAGCTTCTCCATCG...TCTCTTACAGCAGACCAAAGAGGCAGCTCTGAACAGCAGCTTAAAGCGATCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS-3UTR CCA 90 bp | GATCGCTTTAAGCTGCTGTTCAGAGCTGCCTCTTTGGTCTGCTGTAAGAGATGCCTTTGTAAGGGACACTaGTCCCATGGGACAACAAAG | + |
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Preference number: 4 (lower is better) Translates to: DRFKLLFRAASLVCCKRCLCKGH*SHGTTK Trigger: CTTTGTTGTCCCATGGGACCAGTGTCCCTTACAAAG...GCATCTCTTACAGCAGACCAAAGAGGCAGCTCTGAACAGCAGCTTAAAGCGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS-3UTR CCA 90 bp | ATCGCTTTAAGCTGCTGTTCAGAGCTGCCTCTTTGGTCTGCTGTAAGAGATGCAGATCTTGGACCACTCTaGGAAAACACGAACCACCTC | + |
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Preference number: 4 (lower is better) Translates to: IALSCCSELPLWSAVRDADLGPL*ENTNHL Trigger: GAGGTGGTTCGTGTTTTCCCAGAGTGGTCCAAGATC...TGCATCTCTTACAGCAGACCAAAGAGGCAGCTCTGAACAGCAGCTTAAAGCGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS-3UTR CAA 90 bp | CACCGTGCAGGAGACTCTCAGACCAGGAGCAGGGCTGGCAGGACAACCTCGGTGGAGATGCTCGCCACCTaGAGGATCAGCAGGTGCTTA | + |
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Preference number: 5 (lower is better) Translates to: HRAGDSQTRSRAGRTTSVEMLAT*RISRCL Trigger: TAAGCACCTGCTGATCCTCAAGGTGGCGAGCATCTC...CACCGAGGTTGTCCTGCCAGCCCTGCTCCTGGTCTGAGAGTCTCCTGCACGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS GCA 90 bp | TGCTGGCCCAGAGCTGCCGGGGAGGGTAGCCTTCACTGCTCTCCCTaGTCATCCTGTTCACCAACTCTGAGGATTCCTGTTCCAGGGTTG | + |
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Preference number: 5 (lower is better) Translates to: CWPRAAGEGSLHCSP*SSCSPTLRIPVPGL Trigger: CAACCCTGGAACAGGAATCCTCAGAGTTGGTGAACAGGATGAGCAGGGAGAGCAGTGAAGGCTACCCTCCCCGGCAGCTCTGGGCCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
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| CDS GCA 90 bp | ACTCAACCTTGCTGGCCCAGAGCTGCCGGGGAGGGTAGCCTTCACTaGTCTCCCTGCTCATCCTGTTCACCAACTCTGAGGATTCCTGTT | + |
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Preference number: 5 (lower is better) Translates to: TQPCWPRAAGEGSLH*SPCSSCSPTLRIPV Trigger: AACAGGAATCCTCAGAGTTGGTGAACAGGATGAGCAGGGAGAGCAGTGAAGGCTACCCTCCCCGGCAGCTCTGGGCCAGCAAGGTTGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
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| CDS-3UTR CAA 90 bp | TCTGGTGCTGCAGTGACTGATTTATTAGCCAGCAGCCCCACCCTTCCCCGTCACCCAGCAATCAGGATCTaGGACCACTCTGGGAAAACA | + |
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Preference number: 5 (lower is better) Translates to: SGAAVTDLLASSPTLPRHPAIRI*DHSGKT Trigger: TGTTTTCCCAGAGTGGTCCAAGATCCTGATTGCTGG...GTGACGGGGAAGGGTGGGGCTGCTGGCTAATAAATCAGTCACTGCAGCACCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS GCA 90 bp | AGACAGAAGGACAGAAAGAGAGACATGCCCAGGCTGAAGGACGGTTaGCCTCCATCCTCAATTCTGTCTGAGGCTTTCAAGGTCTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RQKDRKRDMPRLKDG*PPSSILSEAFKVFR Trigger: CCGGAAGACCTTGAAAGCCTCAGACAGAATTGAGGATGGAGGGCAACCGTCCTTCAGCCTGGGCATGTCTCTCTTTCTGTCCTTCTGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
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| CDS CCA 90 bp | GGGCCAAAGCCCAGGCCGATATCAAACAAGACCTGGATACCTGCATaGCACCAAATAGTTAAGTCAGAGATGCTCGCCACCTTGAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: GPKPRPISNKTWIPA*HQIVKSEMLATLRI Trigger: GATCCTCAAGGTGGCGAGCATCTCTGACTTAACTATTTGGTGCCATGCAGGTATCCAGGTCTTGTTTGATATCGGCCTGGGCTTTGGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
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| CDS TCA 90 bp | GATGTACGCTATAAAGAAGCTGCAGCTTCCTTTGTGAACCCAGCCTaGGGCAAAGCGCAGGACTCCAGATGGCATCAGCAAGTAGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: DVRYKEAAASFVNPA*GKAQDSRWHQQVAH Trigger: ATGAGCTACTTGCTGATGCCATCTGGAGTCCTGCGCTTTGCCTCAGGCTGGGTTCACAAAGGAAGCTGCAGCTTCTTTATAGCGTACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
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| CDS TCA 90 bp | AACAGCATCAAGATGTACGCTATAAAGAAGCTGCAGCTTCCTTTGTaGACCCAGCCTGAGGCAAAGCGCAGGACTCCAGATGGCATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NSIKMYAIKKLQLPL*TQPEAKRRTPDGIS Trigger: GCTGATGCCATCTGGAGTCCTGCGCTTTGCCTCAGGCTGGGTTCACAAAGGAAGCTGCAGCTTCTTTATAGCGTACATCTTGATGCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
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| CDS CCA 90 bp | AAGGAGACAATGGGGCCAAAGCCCAGGCCGATATCAAACAAGACCTaGATACCTGCATGGCACCAAATAGTTAAGTCAGAGATGCTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: KETMGPKPRPISNKT*IPAWHQIVKSEMLA Trigger: GGCGAGCATCTCTGACTTAACTATTTGGTGCCATGCAGGTATCCAGGTCTTGTTTGATATCGGCCTGGGCTTTGGCCCCATTGTCTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
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| CDS TCA 90 bp | TCAGCATGCCGACTTCCCATGCCCCAAGGTGTGAATCCATATCAGTaGGCTTTGAGTCCCAGGATACACTTTCTTCCATATTGGACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SACRLPMPQGVNPYQ*ALSPRIHFLPYWTL Trigger: CAGAGTCCAATATGGAAGAAAGTGTATCCTGGGACTCAAAGCTCACTGATATGGATTCACACCTTGGGGCATGGGAAGTCGGCATGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
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| CDS-3UTR CAA 90 bp | CTGTTCAGAGCTGCCTCTTTGGTCTGCTGTAAGAGATGCAAGATGTCTGGCCTACCGATGGAGAAGCTCTaGACTTGGAAGGTTCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: LFRAASLVCCKRCKMSGLPMEKL*TWKVHS Trigger: AGAATGAACCTTCCAAGTCAAGAGCTTCTCCATCGG...TAGGCCAGACATCTTGCATCTCTTACAGCAGACCAAAGAGGCAGCTCTGAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS-3UTR CAA 90 bp | GGTGATCGCTTTAAGCTGCTGTTCAGAGCTGCCTCTTTGGTCTGCTGTAAGAGAATTCCTGTTCCAGGGTaGTTACTGTTGCTAATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GDRFKLLFRAASLVCCKRIPVPG*LLLLIL Trigger: CAGAATTAGCAACAGTAACAACCCTGGAACAGGAAT...TCTCTTACAGCAGACCAAAGAGGCAGCTCTGAACAGCAGCTTAAAGCGATCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS CCA 90 bp | AGTACGTGTAGGATGTTGCCTGTTCACATTCAGGATCAAAGTTACTaGAATTCCTTTGTAAGGGACACTGGTCCCATGGGACAACAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: STCRMLPVHIQDQSY*NSFVRDTGPMGQQS Trigger: ACTTTGTTGTCCCATGGGACCAGTGTCCCTTACAAAGGAATTCCAGTAACTTTGATCCTGAATGTGAACAGGCAACATCCTACACGTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
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| CDS-3UTR CAA 90 bp | GGTGATCGCTTTAAGCTGCTGTTCAGAGCTGCCTCTTTGGTCTGCTGTAAGAGAAGTAAGGTGATTATCTaGAACAGAGCCATTAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GDRFKLLFRAASLVCCKRSKVII*NRAIKK Trigger: CTTCTTAATGGCTCTGTTCAAGATAATCACCTTACT...TCTCTTACAGCAGACCAAAGAGGCAGCTCTGAACAGCAGCTTAAAGCGATCACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS CCA 72 bp | TTCAGGCACCACGCTGAGAACGGCGCTCCTCAAGGGTaGGGGAAGGCTGCTGAGCCAGGAATTGTAGTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: FRHHAENGAPQG*GKAAEPGIVVG Trigger: TCCAACTACAATTCCTGGCTCAGCAGCCTTCCCCCACCCTTGAGGAGCGCCGTTCTCAGCGTGGTGCCTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
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| CDS GCA 72 bp | CAAACCAGGGGCTCAGGTTCTTCCACATGTCCGCACTaGTCTGCTGTGCCCTCTGACCAACTGCCATCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: QTRGSGSSTCPH*SAVPSDQLPSP Trigger: TGGAGATGGCAGTTGGTCAGAGGGCACAGCAGAGCAGTGCGGACATGTGGAAGAACCTGAGCCCCTGGTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
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| CDS GCA 72 bp | AGAGCTGCCGGGGAGGGTAGCCTTCACTGCTCTCCCTaGTCATCCTGTTCACCAACTCTGAGGATTCCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: RAAGEGSLHCSP*SSCSPTLRIPV Trigger: AACAGGAATCCTCAGAGTTGGTGAACAGGATGAGCAGGGAGAGCAGTGAAGGCTACCCTCCCCGGCAGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
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| CDS CAA 72 bp | ATACGAAGACGGACGTTAACAGGCCTAGCACCACCATaGGGGAGATGTAGCACCACAGCCAGCCACAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: IRRRTLTGLAPP*GRCSTTASHSQ Trigger: CTGGCTGTGGCTGGCTGTGGTGCTACATCTCCCCAATGGTGGTGCTAGGCCTGTTAACGTCCGTCTTCGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
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| CDS CAA 72 bp | TTCTTGCCAAAGCGAGGGTCTCCCAGGCCTGAGCCTTaGCCATCCGAGTCTCTGAAACTTGAGCCTGTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: FLPKRGSPRPEP*PSESLKLEPVQ Trigger: TTGCACAGGCTCAAGTTTCAGAGACTCGGATGGCAAAGGCTCAGGCCTGGGAGACCCTCGCTTTGGCAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
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| CDS TCA 72 bp | AGCGCAGGACTCCAGATGGCATCAGCAAGTAGCTCATaGTGGCTAGCATGTACTCAACCTTGCTGGCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SAGLQMASASSS*WLACTQPCWPR Trigger: TCTGGGCCAGCAAGGTTGAGTACATGCTAGCCATCATGAGCTACTTGCTGATGCCATCTGGAGTCCTGCGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
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| CDS CAA 72 bp | TCCGAGTCTCTGAAACTTGAGCCTGTGCAATCCAGGTaGATGGAGACCAGGTCAGCATGCCGACTTCCCATG | + |
|
Preference number: 6 (lower is better) Translates to: SESLKLEPVQSR*METRSACRLPM Trigger: CATGGGAAGTCGGCATGCTGACCTGGTCTCCATCAACCTGGATTGCACAGGCTCAAGTTTCAGAGACTCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
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| CDS GCA 72 bp | GACAGAAAGAGAGACATGCCCAGGCTGAAGGACGGTTaGCCTCCATCCTCAATTCTGTCTGAGGCTTTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: DRKRDMPRLKDG*PPSSILSEAFK Trigger: CTTGAAAGCCTCAGACAGAATTGAGGATGGAGGGCAACCGTCCTTCAGCCTGGGCATGTCTCTCTTTCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
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| CDS CAA 90 bp | ATACCTGCATGGCACCAAATAGTTAAGTCAGAGATGCTCGCCACCTaGAGGATCAGCAGGTGCTTAAGCCCGTATTCTGCGCCGTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: IPAWHQIVKSEMLAT*RISRCLSPYSAPSI Trigger: GATGGACGGCGCAGAATACGGGCTTAAGCACCTGCTGATCCTCAAGGTGGCGAGCATCTCTGACTTAACTATTTGGTGCCATGCAGGTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
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| CDS CAA 90 bp | GGGATGGGCATGAGGACAAAGACAGTCAGCCCAGCAATCAGGATCTaGGACCACTCTGGGAAAACACGAACCACCTCTTTGGAAGTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: GMGMRTKTVSPAIRI*DHSGKTRTTSLEVL Trigger: AAGCACTTCCAAAGAGGTGGTTCGTGTTTTCCCAGAGTGGTCCAAGATCCTGATTGCTGGGCTGACTGTCTTTGTCCTCATGCCCATCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS CAA 90 bp | TCCTGTTCCAGGGTTGTTACTGTTGCTAATTCTGTGACACTGGGCTaGGGTTGTAAGGTAATTCTTGCCAAAGCGAGGGTCTCCCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SCSRVVTVANSVTLG*GCKVILAKARVSQA Trigger: GGCCTGGGAGACCCTCGCTTTGGCAAGAATTACCTTACAACCCAAGCCCAGTGTCACAGAATTAGCAACAGTAACAACCCTGGAACAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
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| CDS TCA 72 bp | TATAAAGAAGCTGCAGCTTCCTTTGTGAACCCAGCCTaGGGCAAAGCGCAGGACTCCAGATGGCATCAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: YKEAAASFVNPA*GKAQDSRWHQQ Trigger: TTGCTGATGCCATCTGGAGTCCTGCGCTTTGCCTCAGGCTGGGTTCACAAAGGAAGCTGCAGCTTCTTTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
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| CDS TCA 72 bp | GCTGAAGGACGGTTGCCCTCCATCCTCAATTCTGTCTaGGGCTTTCAAGGTCTTCCGGTACCAAAAGTACGT | + |
|
Preference number: 6 (lower is better) Translates to: AEGRLPSILNSV*GFQGLPVPKVR Trigger: ACGTACTTTTGGTACCGGAAGACCTTGAAAGCCTCAGACAGAATTGAGGATGGAGGGCAACCGTCCTTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
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| CDS CCA 72 bp | TCTTGGACCACTCTGGGAAAACACGAACCACCTCTTTaGAAGTGCTTGAGTCCCAGGCAAAGTAGACAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SWTTLGKHEPPL*KCLSPRQSRQG Trigger: CCCTTGTCTACTTTGCCTGGGACTCAAGCACTTCCAAAGAGGTGGTTCGTGTTTTCCCAGAGTGGTCCAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS CCA 72 bp | AGAATATCCTTTGAGGCCTCCTTTGTAGACTGGAGCTaGCCACTGCCCAGTGGTAGCTTACTGGATGGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: RISFEASFVDWS*PLPSGSLLDGV Trigger: TACACCATCCAGTAAGCTACCACTGGGCAGTGGCCAGCTCCAGTCTACAAAGGAGGCCTCAAAGGATATTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS CAA 72 bp | TGGCACCAAATAGTTAAGTCAGAGATGCTCGCCACCTaGAGGATCAGCAGGTGCTTAAGCCCGTATTCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: WHQIVKSEMLAT*RISRCLSPYSA Trigger: CGCAGAATACGGGCTTAAGCACCTGCTGATCCTCAAGGTGGCGAGCATCTCTGACTTAACTATTTGGTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
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| CDS CAA 90 bp | AAGGTGTCCTGGAGTGTCAAAACGTTGCCCAGCATGAACATGAGATaGGAACACAACCCCAGAGTCAGCAGCAACAGGAAGAAGAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: KVSWSVKTLPSMNMR*EHNPRVSSNRKKRT Trigger: TGTCCTCTTCTTCCTGTTGCTGCTGACTCTGGGGTTGTGTTCCAATCTCATGTTCATGCTGGGCAACGTTTTGACACTCCAGGACACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
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| CDS TCA 72 bp | AAGATGTACGCTATAAAGAAGCTGCAGCTTCCTTTGTaGACCCAGCCTGAGGCAAAGCGCAGGACTCCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: KMYAIKKLQLPL*TQPEAKRRTPD Trigger: ATCTGGAGTCCTGCGCTTTGCCTCAGGCTGGGTTCACAAAGGAAGCTGCAGCTTCTTTATAGCGTACATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
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| CDS TCA 72 bp | ACAGAGCCATTAAGAAGGCATCGGCCATACAGTTGTTaGAGTCGGGTACGTGTGAGGCTAAGGAGACAATGG | + |
|
Preference number: 6 (lower is better) Translates to: TEPLRRHRPYSC*SRVRVRLRRQW Trigger: CCATTGTCTCCTTAGCCTCACACGTACCCGACTTCAACAACTGTATGGCCGATGCCTTCTTAATGGCTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
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| CDS CCA 72 bp | ATGGGGCCAAAGCCCAGGCCGATATCAAACAAGACCTaGATACCTGCATGGCACCAAATAGTTAAGTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: MGPKPRPISNKT*IPAWHQIVKSE Trigger: CTCTGACTTAACTATTTGGTGCCATGCAGGTATCCAGGTCTTGTTTGATATCGGCCTGGGCTTTGGCCCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
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| CDS CCA 72 bp | TCTTGTAGAATATCCTTTGAGGCCTCCTTTGTAGACTaGAGCTGGCCACTGCCCAGTGGTAGCTTACTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SCRISFEASFVD*SWPLPSGSLLD Trigger: ATCCAGTAAGCTACCACTGGGCAGTGGCCAGCTCCAGTCTACAAAGGAGGCCTCAAAGGATATTCTACAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS CAA 72 bp | TGGAGTGTCAAAACGTTGCCCAGCATGAACATGAGATaGGAACACAACCCCAGAGTCAGCAGCAACAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: WSVKTLPSMNMR*EHNPRVSSNRK Trigger: CTTCCTGTTGCTGCTGACTCTGGGGTTGTGTTCCAATCTCATGTTCATGCTGGGCAACGTTTTGACACTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
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| CDS CAA 72 bp | ATGAGGACAAAGACAGTCAGCCCAGCAATCAGGATCTaGGACCACTCTGGGAAAACACGAACCACCTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: MRTKTVSPAIRI*DHSGKTRTTSL Trigger: CAAAGAGGTGGTTCGTGTTTTCCCAGAGTGGTCCAAGATCCTGATTGCTGGGCTGACTGTCTTTGTCCTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213347.2 |
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| CDS CAA 90 bp | GTGATTATCTTGAACAGAGCCATTAAGAAGGCATCGGCCATACAGTaGTTGAAGTCGGGTACGTGTGAGGCTAAGGAGACAATGGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: VIILNRAIKKASAIQ*LKSGTCEAKETMGP Trigger: TGGCCCCATTGTCTCCTTAGCCTCACACGTACCCGACTTCAACAACTGTATGGCCGATGCCTTCTTAATGGCTCTGTTCAAGATAATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
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| CDS CAA 72 bp | AACAGAGCCATTAAGAAGGCATCGGCCATACAGTTGTaGAAGTCGGGTACGTGTGAGGCTAAGGAGACAATG | + |
|
Preference number: 6 (lower is better) Translates to: NRAIKKASAIQL*KSGTCEAKETM Trigger: CATTGTCTCCTTAGCCTCACACGTACCCGACTTCAACAACTGTATGGCCGATGCCTTCTTAATGGCTCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
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| CDS CAA 72 bp | ATGACCTCAGTGAAGATCAGGAACAGGAAGCGAGGGTaGTCCTTAATCTTCAGAAACTGCTTCTGGACGCTG | + |
|
Preference number: 6 (lower is better) Translates to: MTSVKIRNRKRG*SLIFRNCFWTL Trigger: CAGCGTCCAGAAGCAGTTTCTGAAGATTAAGGACAACCCTCGCTTCCTGTTCCTGATCTTCACTGAGGTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
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| CDS CAA 90 bp | ATTATCTTGAACAGAGCCATTAAGAAGGCATCGGCCATACAGTTGTaGAAGTCGGGTACGTGTGAGGCTAAGGAGACAATGGGGCCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: IILNRAIKKASAIQL*KSGTCEAKETMGPK Trigger: CTTTGGCCCCATTGTCTCCTTAGCCTCACACGTACCCGACTTCAACAACTGTATGGCCGATGCCTTCTTAATGGCTCTGTTCAAGATAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
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| CDS CAA 90 bp | AGGATGGAGAGGAGGAAGGGTGTGGTCATCAGTAAGGTGATTATCTaGAACAGAGCCATTAAGAAGGCATCGGCCATACAGTTGTTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RMERRKGVVISKVII*NRAIKKASAIQLLK Trigger: CTTCAACAACTGTATGGCCGATGCCTTCTTAATGGCTCTGTTCAAGATAATCACCTTACTGATGACCACACCCTTCCTCCTCTCCATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
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| CDS TCA 72 bp | CGACTTCCCATGCCCCAAGGTGTGAATCCATATCAGTaGGCTTTGAGTCCCAGGATACACTTTCTTCCATAT | + |
|
Preference number: 6 (lower is better) Translates to: RLPMPQGVNPYQ*ALSPRIHFLPY Trigger: ATATGGAAGAAAGTGTATCCTGGGACTCAAAGCTCACTGATATGGATTCACACCTTGGGGCATGGGAAGTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
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| CDS CAA 72 bp | AGGGTTGTTACTGTTGCTAATTCTGTGACACTGGGCTaGGGTTGTAAGGTAATTCTTGCCAAAGCGAGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: RVVTVANSVTLG*GCKVILAKARV Trigger: GACCCTCGCTTTGGCAAGAATTACCTTACAACCCAAGCCCAGTGTCACAGAATTAGCAACAGTAACAACCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
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| CDS CAA 72 bp | AGGAGGAAGGGTGTGGTCATCAGTAAGGTGATTATCTaGAACAGAGCCATTAAGAAGGCATCGGCCATACAG | + |
|
Preference number: 6 (lower is better) Translates to: RRKGVVISKVII*NRAIKKASAIQ Trigger: CTGTATGGCCGATGCCTTCTTAATGGCTCTGTTCAAGATAATCACCTTACTGATGACCACACCCTTCCTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
||
| CDS CAA 90 bp | ACCAGTAGCAAGACAAACAGGACCTTCCCAATGGACTTGATCCCATaGACCAAGAAAGCACAAATGAGACAGAAGGACAGAAAGAGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: TSSKTNRTFPMDLIP*TKKAQMRQKDRKRD Trigger: GTCTCTCTTTCTGTCCTTCTGTCTCATTTGTGCTTTCTTGGTCAATGGGATCAAGTCCATTGGGAAGGTCCTGTTTGTCTTGCTACTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
||
| CDS CCA 72 bp | AGGATGTTGCCTGTTCACATTCAGGATCAAAGTTACTaGAATTCCTTTGTAAGGGACACTGGTCCCATGGGA | + |
|
Preference number: 6 (lower is better) Translates to: RMLPVHIQDQSY*NSFVRDTGPMG Trigger: TCCCATGGGACCAGTGTCCCTTACAAAGGAATTCCAGTAACTTTGATCCTGAATGTGAACAGGCAACATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
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| CDS CAA 72 bp | ACCAGTAGCAAGACAAACAGGACCTTCCCAATGGACTaGATCCCATTGACCAAGAAAGCACAAATGAGACAG | + |
|
Preference number: 6 (lower is better) Translates to: TSSKTNRTFPMD*IPLTKKAQMRQ Trigger: CTGTCTCATTTGTGCTTTCTTGGTCAATGGGATCAAGTCCATTGGGAAGGTCCTGTTTGTCTTGCTACTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
||
| CDS CAA 90 bp | CTGAGGCTTTCAAGGTCTTCCGGTACCAAAAGTACGTGTAGGATGTaGCCTGTTCACATTCAGGATCAAAGTTACTGGAATTCCTTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: LRLSRSSGTKSTCRM*PVHIQDQSYWNSFV Trigger: TACAAAGGAATTCCAGTAACTTTGATCCTGAATGTGAACAGGCAACATCCTACACGTACTTTTGGTACCGGAAGACCTTGAAAGCCTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
||
| CDS GCA 72 bp | CAAGGTCTTCCGGTACCAAAAGTACGTGTAGGATGTTaGCTGTTCACATTCAGGATCAAAGTTACTGGAATT | + |
|
Preference number: 6 (lower is better) Translates to: QGLPVPKVRVGC*LFTFRIKVTGI Trigger: AATTCCAGTAACTTTGATCCTGAATGTGAACAGGCAACATCCTACACGTACTTTTGGTACCGGAAGACCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
||
| CDS CAA 72 bp | TCAAGGTCTTCCGGTACCAAAAGTACGTGTAGGATGTaGCCTGTTCACATTCAGGATCAAAGTTACTGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: SRSSGTKSTCRM*PVHIQDQSYWN Trigger: ATTCCAGTAACTTTGATCCTGAATGTGAACAGGCAACATCCTACACGTACTTTTGGTACCGGAAGACCTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179310.4 ENSMUST00000213347.2 |
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