Pregenerated sensors for SLC6A15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019894Ensembl transcript IDs: ENSMUST00000074204.12, ENSMUST00000179636.3, ENSMUST00000217905.2
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AACTGTCTAAAACTGTTGGGATTAAAGATCATAGCCATGGACACCTaGGATCACCGTGTGATAGTGAAGCCCAATGCTTCTCATAGGAGA | + |
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Preference number: 1 (lower is better) Translates to: NCLKLLGLKIIAMDT*DHRVIVKPNASHRR Trigger: TCTCCTATGAGAAGCATTGGGCTTCACTATCACACGGTGATCTCAGGTGTCCATGGCTATGATCTTTAATCCCAACAGTTTTAGACAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| 3UTR-3UTR TCA 90 bp | CTATTTTACACAAATTATACAGCCAACCACATGGAACCCAAAGTCACATCTGGATGCCTTCTTACCCTTTaGTACTATTGCTCTATGCGG | + |
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Preference number: 2 (lower is better) Translates to: LFYTNYTANHMEPKVTSGCLLTL*YYCSMR Trigger: CCGCATAGAGCAATAGTATCAAAGGGTAAGAAGGCA...TCCAGATGTGACTTTGGGTTCCATGTGGTTGGCTGTATAATTTGTGTAAAATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| 3UTR TCA 72 bp | ACAGACTATCTACAGAACATACTCATGGGAATGTGCTaGGAGGCACCGGCTCACACAACTGTTCATGGTAAT | + |
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Preference number: 3 (lower is better) Translates to: TDYLQNILMGMC*EAPAHTTVHGN Trigger: ATTACCATGAACAGTTGTGTGAGCCGGTGCCTCTCAGCACATTCCCATGAGTATGTTCTGTAGATAGTCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| 3UTR-3UTR CAA 90 bp | CCCAAAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACCCAACTGTCTAAAACTGTaGGGATTAAAGATCATAGCC | + |
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Preference number: 3 (lower is better) Translates to: PKVTSGPNLFPSISAFLPNCLKL*GLKIIA Trigger: GGCTATGATCTTTAATCCCAACAGTTTTAGACAGTT...GGGTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTTTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| 3UTR TCA 72 bp | AAACTGTTGGGATTAAAGATCATAGCCATGGACACCTaGGATCACCGTGTGATAGTGAAGCCCAATGCTTCT | + |
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Preference number: 3 (lower is better) Translates to: KLLGLKIIAMDT*DHRVIVKPNAS Trigger: AGAAGCATTGGGCTTCACTATCACACGGTGATCTCAGGTGTCCATGGCTATGATCTTTAATCCCAACAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR TCA 90 bp | GGGATTAAAGATCATAGCCATGGACACCTGAGATCACCGTGTGATAGTGAAGCCTTCACCAGGGGGCATTaGTCCCAAGGAAGAGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: GIKDHSHGHLRSPCDSEAFTRGH*SQGRGC Trigger: ACAACCTCTTCCTTGGGATCAATGCCCCCTGGTGAA...GGCTTCACTATCACACGGTGATCTCAGGTGTCCATGGCTATGATCTTTAATCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR CCA 90 bp | CCCAAAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACCCTCCCATAGCGTCCATTaGGAGCAGTATCCAGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: PKVTSGPNLFPSISAFLPSHSVH*EQYPVL Trigger: CAACACTGGATACTGCTCCCAATGGACGCTATGGGA...GGGTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR TCA 90 bp | AAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACCCTTTGTTCACCAGGGGGCATTaGTCCCAAGGAAGAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KSHLDLTFSPVSVPSYPLFTRGH*SQGRGC Trigger: ACAACCTCTTCCTTGGGATCAATGCCCCCTGGTGAA...CAAAGGGTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR GCA 90 bp | AACCCAAAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACGCACACTACACAGCTTaGGAAGCCAATCCCACCCAA | + |
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Preference number: 4 (lower is better) Translates to: NPKSHLDLTFSPVSVPSYAHYTA*EANPTQ Trigger: TTGGGTGGGATTGGCTTCGCAAGCTGTGTAGTGTGC...GTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTTTGGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR GCA 90 bp | GAGGCACCGGCTCACACAACTGTTCATGGTAATACTGGAACTTATGCTGAAGGCGCTGGTGATATCCAGTaGTTCCCGGTACCAGTAATA | + |
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Preference number: 4 (lower is better) Translates to: EAPAHTTVHGNTGTYAEGAGDIQ*FPVPVI Trigger: TATTACTGGTACCGGGAAGCACTGGATATCACCAGC...GCCTTCAGCATAAGTTCCAGTATTACCATGAACAGTTGTGTGAGCCGGTGCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR GCA 90 bp | CCCAAAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACCCGCTGGTGATATCCAGTaGTTCCCGGTACCAGTAATA | + |
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Preference number: 4 (lower is better) Translates to: PKVTSGPNLFPSISAFLPAGDIQ*FPVPVI Trigger: TATTACTGGTACCGGGAAGCACTGGATATCACCAGC...GGGTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR TCA 90 bp | AAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACCCTTTGGCTGAGAGGTTGATGTaGTGGGGAATGACATCCCAA | + |
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Preference number: 4 (lower is better) Translates to: KSHLDLTFSPVSVPSYPLAERLM*WGMTSQ Trigger: TTGGGATGTCATTCCCCATCACATCAACCTCTCAGC...CAAAGGGTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR GCA 90 bp | CCCAAAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACCCAAAGAACACCTGAGTTaGTGCCTCTCTCCAAACCTT | + |
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Preference number: 4 (lower is better) Translates to: PKVTSGPNLFPSISAFLPKEHLS*CLSPNL Trigger: AAGGTTTGGAGAGAGGCAGCAACTCAGGTGTTCTTT...GGGTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTTTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR GCA 90 bp | CCCAAAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACCCCAGAAATTCTTCCGATaGCTTCTCCTTGATCCATGC | + |
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Preference number: 4 (lower is better) Translates to: PKVTSGPNLFPSISAFLPQKFFR*LLLDPC Trigger: GCATGGATCAAGGAGAAGGCATCGGAAGAATTTCTG...GGGTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTTTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR GCA 90 bp | GAGGCACCGGCTCACACAACTGTTCATGGTAATACTGGAACTTATGCTGAAGGCTCCATGAATGAGGCTTaGGTCATCTCCTTCCAAGTT | + |
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Preference number: 4 (lower is better) Translates to: EAPAHTTVHGNTGTYAEGSMNEA*VISFQV Trigger: AACTTGGAAGGAGATGACGCAAGCCTCATTCATGGA...GCCTTCAGCATAAGTTCCAGTATTACCATGAACAGTTGTGTGAGCCGGTGCCTC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR CCA 90 bp | AACCCAAAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACTCCCATAGCGTCCATTaGGAGCAGTATCCAGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: NPKSHLDLTFSPVSVPSYSHSVH*EQYPVL Trigger: CAACACTGGATACTGCTCCCAATGGACGCTATGGGA...GTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTTTGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR TCA 90 bp | AAAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACCCTTTGCTGAGAGGTTGATGTaGTGGGGAATGACATCCCAA | + |
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Preference number: 4 (lower is better) Translates to: KVTSGPNLFPSISAFLPFAERLM*WGMTSQ Trigger: TTGGGATGTCATTCCCCATCACATCAACCTCTCAGC...AAAGGGTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR TCA 90 bp | GAGGCACCGGCTCACACAACTGTTCATGGTAATACTGGAACTTATGCTGAAGGCCAATTTGACAGGCGTTaGGATGAAGAACAGCAAACT | + |
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Preference number: 4 (lower is better) Translates to: EAPAHTTVHGNTGTYAEGQFDRR*DEEQQT Trigger: AGTTTGCTGTTCTTCATCTCAACGCCTGTCAAATTG...GCCTTCAGCATAAGTTCCAGTATTACCATGAACAGTTGTGTGAGCCGGTGCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR TCA 90 bp | CCCAAAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACCCCAATATTCTCCAAGATaGCCACAATTAGCAGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: PKVTSGPNLFPSISAFLPQYSPR*PQLAEA Trigger: TGCCTCTGCTAATTGTGGTCATCTTGGAGAATATTG...GGGTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR TCA 90 bp | AAAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACCCTTTCCGATGCCTTCTCCTTaGTCCATGCATTATATCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KVTSGPNLFPSISAFLPFPMPSP*SMHYIR Trigger: CCGGATATAATGCATGGATCAAGGAGAAGGCATCGG...AAAGGGTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR GCA 90 bp | CCGGCTCACACAACTGTTCATGGTAATACTGGAACTTATGCTGAAGGCAAAATTGCACACTACACAGCTTaGGAAGCCAATCCCACCCAA | + |
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Preference number: 4 (lower is better) Translates to: PAHTTVHGNTGTYAEGKIAHYTA*EANPTQ Trigger: TTGGGTGGGATTGGCTTCGCAAGCTGTGTAGTGTGC...AATTTTGCCTTCAGCATAAGTTCCAGTATTACCATGAACAGTTGTGTGAGCCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR GCA 90 bp | CCGGCTCACACAACTGTTCATGGTAATACTGGAACTTATGCTGAAGGCAAAATTGAACACCTGAGTTGCTaGCTCTCTCCAAACCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: PAHTTVHGNTGTYAEGKIEHLSC*LSPNLG Trigger: CCCAAGGTTTGGAGAGAGGCAGCAACTCAGGTGTTC...AATTTTGCCTTCAGCATAAGTTCCAGTATTACCATGAACAGTTGTGTGAGCCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR GCA 90 bp | AAAACTGTTGGGATTAAAGATCATAGCCATGGACACCTGAGATCACCGTGTGATGAACACCTGAGTTGCTaGCTCTCTCCAAACCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: KTVGIKDHSHGHLRSPCDEHLSC*LSPNLG Trigger: CCCAAGGTTTGGAGAGAGGCAGCAACTCAGGTGTTC...ATCACACGGTGATCTCAGGTGTCCATGGCTATGATCTTTAATCCCAACAGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR GCA 90 bp | GGGATTAAAGATCATAGCCATGGACACCTGAGATCACCGTGTGATAGTGAAGCCCATATCTGGCATGTCTaGCATCAAATACCCAATCCC | + |
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Preference number: 4 (lower is better) Translates to: GIKDHSHGHLRSPCDSEAHIWHV*HQIPNP Trigger: GGGATTGGGTATTTGATGGCAGACATGCCAGATATG...GGCTTCACTATCACACGGTGATCTCAGGTGTCCATGGCTATGATCTTTAATCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR CCA 90 bp | GAGGCACCGGCTCACACAACTGTTCATGGTAATACTGGAACTTATGCTGAAGGCACAGAAAATCCAACTTaGGCCAGAATGTATTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: EAPAHTTVHGNTGTYAEGTENPT*ARMYCS Trigger: GCTGCAATACATTCTGGCCCAAGTTGGATTTTCTGT...GCCTTCAGCATAAGTTCCAGTATTACCATGAACAGTTGTGTGAGCCGGTGCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR CCA 90 bp | CCGGCTCACACAACTGTTCATGGTAATACTGGAACTTATGCTGAAGGCAAAATTCTTTTGGCAGAGGTATaGGAACCGCCACACATTCCC | + |
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Preference number: 4 (lower is better) Translates to: PAHTTVHGNTGTYAEGKILLAEV*EPPHIP Trigger: GGGAATGTGTGGCGGTTCCCATACCTCTGCCAAAAG...AATTTTGCCTTCAGCATAAGTTCCAGTATTACCATGAACAGTTGTGTGAGCCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR CCA 90 bp | AACCCAAAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACCTACAAGTCAGACTCTaGCATATCTGGCATGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: NPKSHLDLTFSPVSVPSYLQVRL*HIWHVC Trigger: GCAGACATGCCAGATATGCCAGAGTCTGACTTGTAG...GTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTTTGGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR TCA 90 bp | AAAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACCCTTTAGGACTGAATGCCTTTaGTCATGGCCAGACAAACCA | + |
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Preference number: 4 (lower is better) Translates to: KVTSGPNLFPSISAFLPFRTECL*SWPDKP Trigger: TGGTTTGTCTGGCCATGATCAAAGGCATTCAGTCCT...AAAGGGTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR TCA 90 bp | GGGATTAAAGATCATAGCCATGGACACCTGAGATCACCGTGTGATAGTGAAGCCTTACGATATTGGCTTTaGACCCCAGAACTGCAAACA | + |
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Preference number: 4 (lower is better) Translates to: GIKDHSHGHLRSPCDSEALRYWL*TPELQT Trigger: TGTTTGCAGTTCTGGGGTTCAAAGCCAATATCGTAA...GGCTTCACTATCACACGGTGATCTCAGGTGTCCATGGCTATGATCTTTAATCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR TCA 90 bp | CCGGCTCACACAACTGTTCATGGTAATACTGGAACTTATGCTGAAGGCAAAATTCCGATGCCTTCTCCTTaGTCCATGCATTATATCCGG | + |
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Preference number: 4 (lower is better) Translates to: PAHTTVHGNTGTYAEGKIPMPSP*SMHYIR Trigger: CCGGATATAATGCATGGATCAAGGAGAAGGCATCGG...AATTTTGCCTTCAGCATAAGTTCCAGTATTACCATGAACAGTTGTGTGAGCCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR TCA 90 bp | AAAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACCCTTTCTCGGTATCTTTCCATaGATGAGGCTTGCGTCATCT | + |
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Preference number: 4 (lower is better) Translates to: KVTSGPNLFPSISAFLPFLGIFP*MRLASS Trigger: AGATGACGCAAGCCTCATTCATGGAAAGATACCGAG...AAAGGGTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR GCA 90 bp | AAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACCCTTTGTCCAAACCCCAATGCTaGCTCTTCGAATTCTTTGAC | + |
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Preference number: 4 (lower is better) Translates to: KSHLDLTFSPVSVPSYPLSKPQC*LFEFFD Trigger: GTCAAAGAATTCGAAGAGGCAGCATTGGGGTTTGGA...CAAAGGGTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR GCA 90 bp | GGGATTAAAGATCATAGCCATGGACACCTGAGATCACCGTGTGATAGTGAAGCCAACATAAGTATGAGATaGGTTTTTCACCAGGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: GIKDHSHGHLRSPCDSEANISMR*VFHQGA Trigger: TGCCCCCTGGTGAAAAACGCATCTCATACTTATGTT...GGCTTCACTATCACACGGTGATCTCAGGTGTCCATGGCTATGATCTTTAATCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR GCA 90 bp | CCGGCTCACACAACTGTTCATGGTAATACTGGAACTTATGCTGAAGGCAAAATTGCCAAGCCAGTGCCCTaGACAGCTTTATTTAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: PAHTTVHGNTGTYAEGKIAKPVP*TALFSS Trigger: TGAGCTAAATAAAGCTGTGCAGGGCACTGGCTTGGC...AATTTTGCCTTCAGCATAAGTTCCAGTATTACCATGAACAGTTGTGTGAGCCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR GCA 90 bp | AAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACCCTTTGCAATTGTTCCAAACATaGTGCCGAGGCCGAGATTTA | + |
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Preference number: 4 (lower is better) Translates to: KSHLDLTFSPVSVPSYPLQLFQT*CRGRDL Trigger: TAAATCTCGGCCTCGGCAGCATGTTTGGAACAATTG...CAAAGGGTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR GCA 90 bp | AACCCAAAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACCTTCTCCTTGATCCATaGATTATATCCGGGAGGACT | + |
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Preference number: 4 (lower is better) Translates to: NPKSHLDLTFSPVSVPSYLLLDP*IISGRT Trigger: AGTCCTCCCGGATATAATGCATGGATCAAGGAGAAG...GTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTTTGGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR CCA 90 bp | AAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACCCTTTGAGCAGTATCCAGTGTTaGGGAACCACTTTGTTTTCG | + |
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Preference number: 4 (lower is better) Translates to: KSHLDLTFSPVSVPSYPLSSIQC*GTTLFS Trigger: CGAAAACAAAGTGGTTCCCCAACACTGGATACTGCT...CAAAGGGTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR TCA 90 bp | AAAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACCCTTTAACTTGAAAACGCGATaGCTCCACCAAATCCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: KVTSGPNLFPSISAFLPFNLKTR*LHQIPN Trigger: GTTTGGGATTTGGTGGAGTCATCGCGTTTTCAAGTT...AAAGGGTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR GCA 90 bp | AACCCAAAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACAACATAAGTATGAGATaGGTTTTTCACCAGGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: NPKSHLDLTFSPVSVPSYNISMR*VFHQGA Trigger: TGCCCCCTGGTGAAAAACGCATCTCATACTTATGTT...GTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTTTGGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR GCA 90 bp | CCGGCTCACACAACTGTTCATGGTAATACTGGAACTTATGCTGAAGGCAAAATTTTTGAACCCCAGAACTaGAAACACCACCAGTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: PAHTTVHGNTGTYAEGKIFEPQN*KHHQCC Trigger: GCAACACTGGTGGTGTTTGCAGTTCTGGGGTTCAAA...AATTTTGCCTTCAGCATAAGTTCCAGTATTACCATGAACAGTTGTGTGAGCCGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR TCA 90 bp | GGGATTAAAGATCATAGCCATGGACACCTGAGATCACCGTGTGATAGTGAAGCCGTATCTTTCTCTTCCTaGACATCGACAATTAGTTCA | + |
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Preference number: 4 (lower is better) Translates to: GIKDHSHGHLRSPCDSEAVSFSS*TSTISS Trigger: TGAACTAATTGTCGATGTTCAGGAAGAGAAAGATAC...GGCTTCACTATCACACGGTGATCTCAGGTGTCCATGGCTATGATCTTTAATCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR TCA 90 bp | AAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACCCTTTGCGAGATTTATCAACATaGGGAAAAACATCACTGACC | + |
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Preference number: 4 (lower is better) Translates to: KSHLDLTFSPVSVPSYPLRDLST*GKTSLT Trigger: GGTCAGTGATGTTTTTCCTCATGTTGATAAATCTCG...CAAAGGGTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR GCA 90 bp | AAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACCCTTTGATACGGCAAAAGATATaGACCACCACCATTCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: KSHLDLTFSPVSVPSYPLIRQKI*TTTILL Trigger: CAAAAGAATGGTGGTGGTGCATATCTTTTGCCGTAT...CAAAGGGTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR GCA 90 bp | AAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACCCTTTGAATTCCAAACCCCAATaGTGCCTCTTCGAATTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KSHLDLTFSPVSVPSYPLNSKPQ*CLFEFF Trigger: AAAGAATTCGAAGAGGCAGCATTGGGGTTTGGAATT...CAAAGGGTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR GCA 90 bp | AAAACTGTTGGGATTAAAGATCATAGCCATGGACACCTGAGATCACCGTGTGATAAAGAACACCTGAGTTaGTGCCTCTCTCCAAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: KTVGIKDHSHGHLRSPCDKEHLS*CLSPNL Trigger: AAGGTTTGGAGAGAGGCAGCAACTCAGGTGTTCTTT...ATCACACGGTGATCTCAGGTGTCCATGGCTATGATCTTTAATCCCAACAGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR GCA 90 bp | AAAACTGTTGGGATTAAAGATCATAGCCATGGACACCTGAGATCACCGTGTGATCAATTGTTCCAAACATaGTGCCGAGGCCGAGATTTA | + |
|
Preference number: 4 (lower is better) Translates to: KTVGIKDHSHGHLRSPCDQLFQT*CRGRDL Trigger: TAAATCTCGGCCTCGGCAGCATGTTTGGAACAATTG...ATCACACGGTGATCTCAGGTGTCCATGGCTATGATCTTTAATCCCAACAGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR GCA 90 bp | CCGGCTCACACAACTGTTCATGGTAATACTGGAACTTATGCTGAAGGCAAAATTCATATCTGGCATGTCTaGCATCAAATACCCAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: PAHTTVHGNTGTYAEGKIHIWHV*HQIPNP Trigger: GGGATTGGGTATTTGATGGCAGACATGCCAGATATG...AATTTTGCCTTCAGCATAAGTTCCAGTATTACCATGAACAGTTGTGTGAGCCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR CCA 90 bp | AAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACCCTTTGTTCCAGGAAAAAGAGTaGAATTCCTATCACCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KSHLDLTFSPVSVPSYPLFQEKE*NSYHQK Trigger: CTTCTGGTGATAGGAATTCCACTCTTTTTCCTGGAA...CAAAGGGTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR CCA 90 bp | AACCCAAAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACACCAGTAATAGGTGGTaGCAGAACTTTGTTCACATT | + |
|
Preference number: 4 (lower is better) Translates to: NPKSHLDLTFSPVSVPSYTSNRW*QNFVHI Trigger: AATGTGAACAAAGTTCTGCCACCACCTATTACTGGT...GTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTTTGGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR CCA 90 bp | AAAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACCCTTTAGACTCTGGCATATCTaGCATGTCTGCCATCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: KVTSGPNLFPSISAFLPFRLWHI*HVCHQI Trigger: TATTTGATGGCAGACATGCCAGATATGCCAGAGTCT...AAAGGGTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR TCA 90 bp | AAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACCCTTTGGTATCTTTCTCTTCCTaGACATCGACAATTAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KSHLDLTFSPVSVPSYPLVSFSS*TSTISS Trigger: TGAACTAATTGTCGATGTTCAGGAAGAGAAAGATAC...CAAAGGGTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR TCA 90 bp | CCGGCTCACACAACTGTTCATGGTAATACTGGAACTTATGCTGAAGGCAAAATTCAATTTGACAGGCGTTaGGATGAAGAACAGCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: PAHTTVHGNTGTYAEGKIQFDRR*DEEQQT Trigger: AGTTTGCTGTTCTTCATCTCAACGCCTGTCAAATTG...AATTTTGCCTTCAGCATAAGTTCCAGTATTACCATGAACAGTTGTGTGAGCCGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR TCA 90 bp | AAAACTGTTGGGATTAAAGATCATAGCCATGGACACCTGAGATCACCGTGTGATCAATATTCTCCAAGATaGCCACAATTAGCAGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KTVGIKDHSHGHLRSPCDQYSPR*PQLAEA Trigger: TGCCTCTGCTAATTGTGGTCATCTTGGAGAATATTG...ATCACACGGTGATCTCAGGTGTCCATGGCTATGATCTTTAATCCCAACAGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR TCA 90 bp | AAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACCCTTTGACCAAAATTTGGAGATaGCATTTCACTCGGTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: KSHLDLTFSPVSVPSYPLTKIWR*HFTRYL Trigger: AAGATACCGAGTGAAATGTCATCTCCAAATTTTGGT...CAAAGGGTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR GCA 90 bp | AAAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACCCTTTAATTCCAAACCCCAATaGTGCCTCTTCGAATTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KVTSGPNLFPSISAFLPFNSKPQ*CLFEFF Trigger: AAAGAATTCGAAGAGGCAGCATTGGGGTTTGGAATT...AAAGGGTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR GCA 90 bp | CTATTTTACACAAATTATACAGCCAACCACATGGAACCCAAAGTCACATCTGGATTTGAACCCCAGAACTaGAAACACCACCAGTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LFYTNYTANHMEPKVTSGFEPQN*KHHQCC Trigger: GCAACACTGGTGGTGTTTGCAGTTCTGGGGTTCAAA...TCCAGATGTGACTTTGGGTTCCATGTGGTTGGCTGTATAATTTGTGTAAAATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR CCA 90 bp | GTTTCAATGCTACCAAAATTAAGTACAGACTATCTACAGAACATACTCATGGGACTTTTGGCAGAGGTATaGGAACCGCCACACATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VSMLPKLSTDYLQNILMGLLAEV*EPPHIP Trigger: GGGAATGTGTGGCGGTTCCCATACCTCTGCCAAAAG...TCCCATGAGTATGTTCTGTAGATAGTCTGTACTTAATTTTGGTAGCATTGAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR TCA 90 bp | CCGGCTCACACAACTGTTCATGGTAATACTGGAACTTATGCTGAAGGCAAAATTCGAGATTTATCAACATaGGGAAAAACATCACTGACC | + |
|
Preference number: 4 (lower is better) Translates to: PAHTTVHGNTGTYAEGKIRDLST*GKTSLT Trigger: GGTCAGTGATGTTTTTCCTCATGTTGATAAATCTCG...AATTTTGCCTTCAGCATAAGTTCCAGTATTACCATGAACAGTTGTGTGAGCCGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR GCA 90 bp | CCGGCTCACACAACTGTTCATGGTAATACTGGAACTTATGCTGAAGGCAAAATTATACGGCAAAAGATATaGACCACCACCATTCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PAHTTVHGNTGTYAEGKIIRQKI*TTTILL Trigger: CAAAAGAATGGTGGTGGTGCATATCTTTTGCCGTAT...AATTTTGCCTTCAGCATAAGTTCCAGTATTACCATGAACAGTTGTGTGAGCCGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR GCA 90 bp | GTTTCAATGCTACCAAAATTAAGTACAGACTATCTACAGAACATACTCATGGGAGCCAAGCCAGTGCCCTaGACAGCTTTATTTAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VSMLPKLSTDYLQNILMGAKPVP*TALFSS Trigger: TGAGCTAAATAAAGCTGTGCAGGGCACTGGCTTGGC...TCCCATGAGTATGTTCTGTAGATAGTCTGTACTTAATTTTGGTAGCATTGAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR GCA 90 bp | CTATTTTACACAAATTATACAGCCAACCACATGGAACCCAAAGTCACATCTGGACTTCTCCTTGATCCATaGATTATATCCGGGAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: LFYTNYTANHMEPKVTSGLLLDP*IISGRT Trigger: AGTCCTCCCGGATATAATGCATGGATCAAGGAGAAG...TCCAGATGTGACTTTGGGTTCCATGTGGTTGGCTGTATAATTTGTGTAAAATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR GCA 90 bp | CTATTTTACACAAATTATACAGCCAACCACATGGAACCCAAAGTCACATCTGGATCCATGAATGAGGCTTaGGTCATCTCCTTCCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LFYTNYTANHMEPKVTSGSMNEA*VISFQV Trigger: AACTTGGAAGGAGATGACGCAAGCCTCATTCATGGA...TCCAGATGTGACTTTGGGTTCCATGTGGTTGGCTGTATAATTTGTGTAAAATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR CCA 90 bp | CCGGCTCACACAACTGTTCATGGTAATACTGGAACTTATGCTGAAGGCAAAATTACCAGTAATAGGTGGTaGCAGAACTTTGTTCACATT | + |
|
Preference number: 4 (lower is better) Translates to: PAHTTVHGNTGTYAEGKITSNRW*QNFVHI Trigger: AATGTGAACAAAGTTCTGCCACCACCTATTACTGGT...AATTTTGCCTTCAGCATAAGTTCCAGTATTACCATGAACAGTTGTGTGAGCCGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR TCA 90 bp | CTATTTTACACAAATTATACAGCCAACCACATGGAACCCAAAGTCACATCTGGATTACGATATTGGCTTTaGACCCCAGAACTGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: LFYTNYTANHMEPKVTSGLRYWL*TPELQT Trigger: TGTTTGCAGTTCTGGGGTTCAAAGCCAATATCGTAA...TCCAGATGTGACTTTGGGTTCCATGTGGTTGGCTGTATAATTTGTGTAAAATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR CCA 90 bp | CTATTTTACACAAATTATACAGCCAACCACATGGAACCCAAAGTCACATCTGGAAGACTCTGGCATATCTaGCATGTCTGCCATCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: LFYTNYTANHMEPKVTSGRLWHI*HVCHQI Trigger: TATTTGATGGCAGACATGCCAGATATGCCAGAGTCT...TCCAGATGTGACTTTGGGTTCCATGTGGTTGGCTGTATAATTTGTGTAAAATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR CCA 90 bp | GTTTCAATGCTACCAAAATTAAGTACAGACTATCTACAGAACATACTCATGGGACTACAAGTCAGACTCTaGCATATCTGGCATGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VSMLPKLSTDYLQNILMGLQVRL*HIWHVC Trigger: GCAGACATGCCAGATATGCCAGAGTCTGACTTGTAG...TCCCATGAGTATGTTCTGTAGATAGTCTGTACTTAATTTTGGTAGCATTGAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR TCA 90 bp | GTTTCAATGCTACCAAAATTAAGTACAGACTATCTACAGAACATACTCATGGGAAACTTGAAAACGCGATaGCTCCACCAAATCCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VSMLPKLSTDYLQNILMGNLKTR*LHQIPN Trigger: GTTTGGGATTTGGTGGAGTCATCGCGTTTTCAAGTT...TCCCATGAGTATGTTCTGTAGATAGTCTGTACTTAATTTTGGTAGCATTGAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR TCA 90 bp | CTATTTTACACAAATTATACAGCCAACCACATGGAACCCAAAGTCACATCTGGACAGTGTTGCCAGAACTaGAGTGAAAAAGTTGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: LFYTNYTANHMEPKVTSGQCCQN*SEKVDE Trigger: TTCATCAACTTTTTCACTTCAGTTCTGGCAACACTG...TCCAGATGTGACTTTGGGTTCCATGTGGTTGGCTGTATAATTTGTGTAAAATAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR GCA 90 bp | GTTTCAATGCTACCAAAATTAAGTACAGACTATCTACAGAACATACTCATGGGACAGAAATTCTTCCGATaGCTTCTCCTTGATCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: VSMLPKLSTDYLQNILMGQKFFR*LLLDPC Trigger: GCATGGATCAAGGAGAAGGCATCGGAAGAATTTCTG...TCCCATGAGTATGTTCTGTAGATAGTCTGTACTTAATTTTGGTAGCATTGAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR CCA 90 bp | GTTTCAATGCTACCAAAATTAAGTACAGACTATCTACAGAACATACTCATGGGAAGCAGTATCCAGTGTTaGGGAACCACTTTGTTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: VSMLPKLSTDYLQNILMGSSIQC*GTTLFS Trigger: CGAAAACAAAGTGGTTCCCCAACACTGGATACTGCT...TCCCATGAGTATGTTCTGTAGATAGTCTGTACTTAATTTTGGTAGCATTGAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR CCA 90 bp | GTTTCAATGCTACCAAAATTAAGTACAGACTATCTACAGAACATACTCATGGGAACAGAAAATCCAACTTaGGCCAGAATGTATTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VSMLPKLSTDYLQNILMGTENPT*ARMYCS Trigger: GCTGCAATACATTCTGGCCCAAGTTGGATTTTCTGT...TCCCATGAGTATGTTCTGTAGATAGTCTGTACTTAATTTTGGTAGCATTGAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR TCA 90 bp | GTTTCAATGCTACCAAAATTAAGTACAGACTATCTACAGAACATACTCATGGGACAGTGTTGCCAGAACTaGAGTGAAAAAGTTGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: VSMLPKLSTDYLQNILMGQCCQN*SEKVDE Trigger: TTCATCAACTTTTTCACTTCAGTTCTGGCAACACTG...TCCCATGAGTATGTTCTGTAGATAGTCTGTACTTAATTTTGGTAGCATTGAAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR TCA 90 bp | GTTTCAATGCTACCAAAATTAAGTACAGACTATCTACAGAACATACTCATGGGAACCAAAATTTGGAGATaGCATTTCACTCGGTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSMLPKLSTDYLQNILMGTKIWR*HFTRYL Trigger: AAGATACCGAGTGAAATGTCATCTCCAAATTTTGGT...TCCCATGAGTATGTTCTGTAGATAGTCTGTACTTAATTTTGGTAGCATTGAAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR CAA 90 bp | CCCAAAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACCCAGCACACTACACAGCTaGCGAAGCCAATCCCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: PKVTSGPNLFPSISAFLPSTLHS*RSQSHP Trigger: TGGGTGGGATTGGCTTCGCAAGCTGTGTAGTGTGCT...GGGTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR CAA 90 bp | CCCAAAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACCCTTTCACCAGGGGGCATaGATCCCAAGGAAGAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PKVTSGPNLFPSISAFLPFHQGA*IPRKRL Trigger: CAACCTCTTCCTTGGGATCAATGCCCCCTGGTGAAA...GGGTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTTTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS GCA 90 bp | GACTCCACCAAATCCCAAACCCAATGCAAAGAACACCTGAGTTGCTaGCTCTCTCCAAACCTTGGGCTCCAACATCATTTCCAGCTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: DSTKSQTQCKEHLSC*LSPNLGLQHHFQLR Trigger: CCTAAGCTGGAAATGATGTTGGAGCCCAAGGTTTGGAGAGAGGCAGCAACTCAGGTGTTCTTTGCATTGGGTTTGGGATTTGGTGGAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS GCA 90 bp | GATGACTCCACCAAATCCCAAACCCAATGCAAAGAACACCTGAGTTaGTGCCTCTCTCCAAACCTTGGGCTCCAACATCATTTCCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: DDSTKSQTQCKEHLS*CLSPNLGLQHHFQL Trigger: AAGCTGGAAATGATGTTGGAGCCCAAGGTTTGGAGAGAGGCAGCAACTCAGGTGTTCTTTGCATTGGGTTTGGGATTTGGTGGAGTCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS CCA 90 bp | AGAACTATCATCTATGAGGTTGCAGCGACGAATGATGAACACCACTaGGACAGGAAGTATGGCCAGCACCATCAGAGAGAAACAGACGAC | + |
|
Preference number: 5 (lower is better) Translates to: RTIIYEVAATNDEHH*DRKYGQHHQRETDD Trigger: GTCGTCTGTTTCTCTCTGATGGTGCTGGCCATACTTCCTGTCCCAGTGGTGTTCATCATTCGTCGCTGCAACCTCATAGATGATAGTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR CAA 90 bp | AACCCAAAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACTTTCACCAGGGGGCATaGATCCCAAGGAAGAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: NPKSHLDLTFSPVSVPSYFHQGA*IPRKRL Trigger: CAACCTCTTCCTTGGGATCAATGCCCCCTGGTGAAA...GTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTTTGGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR CAA 90 bp | AAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACCCTTTGGCCTCTCTCCAAACCTaGGGCTCCAACATCATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KSHLDLTFSPVSVPSYPLASLQT*GSNIIS Trigger: GGAAATGATGTTGGAGCCCAAGGTTTGGAGAGAGGC...CAAAGGGTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR CAA 90 bp | CCGGCTCACACAACTGTTCATGGTAATACTGGAACTTATGCTGAAGGCAAAATTAGCACACTACACAGCTaGCGAAGCCAATCCCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: PAHTTVHGNTGTYAEGKISTLHS*RSQSHP Trigger: TGGGTGGGATTGGCTTCGCAAGCTGTGTAGTGTGCT...AATTTTGCCTTCAGCATAAGTTCCAGTATTACCATGAACAGTTGTGTGAGCCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS CCA 90 bp | TTCCCGGTACCAGTAATAGGTGGTGGCAGAACTTTGTTCACATTCTaGCTCAACATAAGTATGAGATGCGTTTTTCACCAGGGGGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: FPVPVIGGGRTLFTF*LNISMRCVFHQGAL Trigger: CAATGCCCCCTGGTGAAAAACGCATCTCATACTTATGTTGAGCCAGAATGTGAACAAAGTTCTGCCACCACCTATTACTGGTACCGGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR CAA 90 bp | CCGGCTCACACAACTGTTCATGGTAATACTGGAACTTATGCTGAAGGCAAAATTACCACCACCATTCTTTaGGCAGAGGTATGGGAACCG | + |
|
Preference number: 5 (lower is better) Translates to: PAHTTVHGNTGTYAEGKITTTIL*AEVWEP Trigger: CGGTTCCCATACCTCTGCCAAAAGAATGGTGGTGGT...AATTTTGCCTTCAGCATAAGTTCCAGTATTACCATGAACAGTTGTGTGAGCCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR CAA 90 bp | AAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACCCTTTGGCCTCTTCGAATTCTTaGACCCACAGAAAGTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KSHLDLTFSPVSVPSYPLASSNS*THRKFQ Trigger: CTGGAACTTTCTGTGGGTCAAAGAATTCGAAGAGGC...CAAAGGGTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR CAA 90 bp | CCGGCTCACACAACTGTTCATGGTAATACTGGAACTTATGCTGAAGGCAAAATTGCCTCTCTCCAAACCTaGGGCTCCAACATCATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PAHTTVHGNTGTYAEGKIASLQT*GSNIIS Trigger: GGAAATGATGTTGGAGCCCAAGGTTTGGAGAGAGGC...AATTTTGCCTTCAGCATAAGTTCCAGTATTACCATGAACAGTTGTGTGAGCCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS-3UTR CAA 90 bp | GGGATTAAAGATCATAGCCATGGACACCTGAGATCACCGTGTGATAGTGAAGCCCTATCATCTATGAGGTaGCAGCGACGAATGATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GIKDHSHGHLRSPCDSEALSSMR*QRRMMN Trigger: GTTCATCATTCGTCGCTGCAACCTCATAGATGATAG...GGCTTCACTATCACACGGTGATCTCAGGTGTCCATGGCTATGATCTTTAATCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS CCA 90 bp | TATCTGGCATGTCTGCCATCAAATACCCAATCCCATAGCGTCCATTaGGAGCAGTATCCAGTGTTGGGGAACCACTTTGTTTTCGATAAA | + |
|
Preference number: 5 (lower is better) Translates to: YLACLPSNTQSHSVH*EQYPVLGNHFVFDK Trigger: TTTATCGAAAACAAAGTGGTTCCCCAACACTGGATACTGCTCCCAATGGACGCTATGGGATTGGGTATTTGATGGCAGACATGCCAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR CAA 90 bp | AAAACTGTTGGGATTAAAGATCATAGCCATGGACACCTGAGATCACCGTGTGATTCCACTGAGTCTTCGTaGGACAGGAGGTCTTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: KTVGIKDHSHGHLRSPCDSTESS*DRRSLT Trigger: TGTCAAAGACCTCCTGTCCAACGAAGACTCAGTGGA...ATCACACGGTGATCTCAGGTGTCCATGGCTATGATCTTTAATCCCAACAGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR CAA 90 bp | CCGGCTCACACAACTGTTCATGGTAATACTGGAACTTATGCTGAAGGCAAAATTTCCACTGAGTCTTCGTaGGACAGGAGGTCTTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: PAHTTVHGNTGTYAEGKISTESS*DRRSLT Trigger: TGTCAAAGACCTCCTGTCCAACGAAGACTCAGTGGA...AATTTTGCCTTCAGCATAAGTTCCAGTATTACCATGAACAGTTGTGTGAGCCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR CAA 90 bp | AAAACTGTTGGGATTAAAGATCATAGCCATGGACACCTGAGATCACCGTGTGATCAAAGAACACCTGAGTaGCTGCCTCTCTCCAAACCT | + |
|
Preference number: 5 (lower is better) Translates to: KTVGIKDHSHGHLRSPCDQRTPE*LPLSKP Trigger: AGGTTTGGAGAGAGGCAGCAACTCAGGTGTTCTTTG...ATCACACGGTGATCTCAGGTGTCCATGGCTATGATCTTTAATCCCAACAGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR CAA 90 bp | AACCCAAAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACTTGGACAGGAGGTCTTaGACAGATTCAATGACATCA | + |
|
Preference number: 5 (lower is better) Translates to: NPKSHLDLTFSPVSVPSYLDRRS*TDSMTS Trigger: TGATGTCATTGAATCTGTCAAAGACCTCCTGTCCAA...GTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTTTGGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR CAA 90 bp | CCGGCTCACACAACTGTTCATGGTAATACTGGAACTTATGCTGAAGGCAAAATTGCCTCTTCGAATTCTTaGACCCACAGAAAGTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PAHTTVHGNTGTYAEGKIASSNS*THRKFQ Trigger: CTGGAACTTTCTGTGGGTCAAAGAATTCGAAGAGGC...AATTTTGCCTTCAGCATAAGTTCCAGTATTACCATGAACAGTTGTGTGAGCCGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR CAA 90 bp | AAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACCCTTTGTTTACGATATTGGCTTaGAACCCCAGAACTGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: KSHLDLTFSPVSVPSYPLFTILA*NPRTAN Trigger: GTTTGCAGTTCTGGGGTTCAAAGCCAATATCGTAAA...CAAAGGGTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR CAA 90 bp | GAGGCACCGGCTCACACAACTGTTCATGGTAATACTGGAACTTATGCTGAAGGCTTTTCATTTACGATATaGGCTTTGAACCCCAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: EAPAHTTVHGNTGTYAEGFSFTI*ALNPRT Trigger: AGTTCTGGGGTTCAAAGCCAATATCGTAAATGAAAA...GCCTTCAGCATAAGTTCCAGTATTACCATGAACAGTTGTGTGAGCCGGTGCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR CAA 90 bp | GGGATTAAAGATCATAGCCATGGACACCTGAGATCACCGTGTGATAGTGAAGCCATTTCCTTCCTCACTTaGAAGGTATCCACAATAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GIKDHSHGHLRSPCDSEAISFLT*KVSTIG Trigger: TCCTATTGTGGATACCTTCAAAGTGAGGAAGGAAAT...GGCTTCACTATCACACGGTGATCTCAGGTGTCCATGGCTATGATCTTTAATCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR CAA 90 bp | AAAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACCCTTTCTATCATCTATGAGGTaGCAGCGACGAATGATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: KVTSGPNLFPSISAFLPFLSSMR*QRRMMN Trigger: GTTCATCATTCGTCGCTGCAACCTCATAGATGATAG...AAAGGGTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR CAA 90 bp | AAAACTGTTGGGATTAAAGATCATAGCCATGGACACCTGAGATCACCGTGTGATGAGCAGTATCCAGTGTaGGGGAACCACTTTGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KTVGIKDHSHGHLRSPCDEQYPV*GNHFVF Trigger: GAAAACAAAGTGGTTCCCCAACACTGGATACTGCTC...ATCACACGGTGATCTCAGGTGTCCATGGCTATGATCTTTAATCCCAACAGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR CAA 90 bp | CCGGCTCACACAACTGTTCATGGTAATACTGGAACTTATGCTGAAGGCAAAATTGAGCAGTATCCAGTGTaGGGGAACCACTTTGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PAHTTVHGNTGTYAEGKIEQYPV*GNHFVF Trigger: GAAAACAAAGTGGTTCCCCAACACTGGATACTGCTC...AATTTTGCCTTCAGCATAAGTTCCAGTATTACCATGAACAGTTGTGTGAGCCGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS TCA 90 bp | TACCAAAATTTGGAGATGACATTTCACTCGGTATCTTTCCATGAATaGGGCTTGCGTCATCTCCTTCCAAGTTCACAGGTTCCTTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: YQNLEMTFHSVSFHE*GLRHLLPSSQVPSG Trigger: TCCTGAAGGAACCTGTGAACTTGGAAGGAGATGACGCAAGCCTCATTCATGGAAAGATACCGAGTGAAATGTCATCTCCAAATTTTGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR CAA 90 bp | AAAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACCCTTTGTCGGATGCCATCAATaGAACCATTTAAAAGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: KVTSGPNLFPSISAFLPFVGCHQ*NHLKGE Trigger: CTCTCCTTTTAAATGGTTCAATTGATGGCATCCGAC...AAAGGGTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS GCA 90 bp | GAAGTAATTTCCAGAGCGCTGCACGAATATCAAGCCAATACAAAATaGCAGGAGGCAACAGATAACAGTGAGTATTTCCTTCCTCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: EVISRALHEYQANTK*QEATDNSEYFLPHF Trigger: AAAGTGAGGAAGGAAATACTCACTGTTATCTGTTGCCTCCTGGCATTTTGTATTGGCTTGATATTCGTGCAGCGCTCTGGAAATTACTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR CAA 90 bp | AAAACTGTTGGGATTAAAGATCATAGCCATGGACACCTGAGATCACCGTGTGATTTGGACAGGAGGTCTTaGACAGATTCAATGACATCA | + |
|
Preference number: 5 (lower is better) Translates to: KTVGIKDHSHGHLRSPCDLDRRS*TDSMTS Trigger: TGATGTCATTGAATCTGTCAAAGACCTCCTGTCCAA...ATCACACGGTGATCTCAGGTGTCCATGGCTATGATCTTTAATCCCAACAGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR CAA 90 bp | AAAACTGTTGGGATTAAAGATCATAGCCATGGACACCTGAGATCACCGTGTGATTACAGAAAATCCAACTaGGGCCAGAATGTATTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KTVGIKDHSHGHLRSPCDYRKSN*GQNVLQ Trigger: CTGCAATACATTCTGGCCCAAGTTGGATTTTCTGTA...ATCACACGGTGATCTCAGGTGTCCATGGCTATGATCTTTAATCCCAACAGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR CAA 90 bp | GTTTCAATGCTACCAAAATTAAGTACAGACTATCTACAGAACATACTCATGGGAACCACCACCATTCTTTaGGCAGAGGTATGGGAACCG | + |
|
Preference number: 5 (lower is better) Translates to: VSMLPKLSTDYLQNILMGTTTIL*AEVWEP Trigger: CGGTTCCCATACCTCTGCCAAAAGAATGGTGGTGGT...TCCCATGAGTATGTTCTGTAGATAGTCTGTACTTAATTTTGGTAGCATTGAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR CAA 90 bp | CCGGCTCACACAACTGTTCATGGTAATACTGGAACTTATGCTGAAGGCAAAATTGTCGGATGCCATCAATaGAACCATTTAAAAGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PAHTTVHGNTGTYAEGKIVGCHQ*NHLKGE Trigger: CTCTCCTTTTAAATGGTTCAATTGATGGCATCCGAC...AATTTTGCCTTCAGCATAAGTTCCAGTATTACCATGAACAGTTGTGTGAGCCGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR CAA 90 bp | AACCCAAAGTCACATCTGGACCTAACCTTTTCCCCAGTATCAGTGCCTTCTTACTTTTCATTTACGATATaGGCTTTGAACCCCAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: NPKSHLDLTFSPVSVPSYFSFTI*ALNPRT Trigger: AGTTCTGGGGTTCAAAGCCAATATCGTAAATGAAAA...GTAAGAAGGCACTGATACTGGGGAAAAGGTTAGGTCCAGATGTGACTTTGGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR CAA 90 bp | GTTTCAATGCTACCAAAATTAAGTACAGACTATCTACAGAACATACTCATGGGACAAAGAACACCTGAGTaGCTGCCTCTCTCCAAACCT | + |
|
Preference number: 5 (lower is better) Translates to: VSMLPKLSTDYLQNILMGQRTPE*LPLSKP Trigger: AGGTTTGGAGAGAGGCAGCAACTCAGGTGTTCTTTG...TCCCATGAGTATGTTCTGTAGATAGTCTGTACTTAATTTTGGTAGCATTGAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR CAA 90 bp | CTATTTTACACAAATTATACAGCCAACCACATGGAACCCAAAGTCACATCTGGATTTACGATATTGGCTTaGAACCCCAGAACTGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LFYTNYTANHMEPKVTSGFTILA*NPRTAN Trigger: GTTTGCAGTTCTGGGGTTCAAAGCCAATATCGTAAA...TCCAGATGTGACTTTGGGTTCCATGTGGTTGGCTGTATAATTTGTGTAAAATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS-3UTR CAA 90 bp | CTATTTTACACAAATTATACAGCCAACCACATGGAACCCAAAGTCACATCTGGAATTTCCTTCCTCACTTaGAAGGTATCCACAATAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LFYTNYTANHMEPKVTSGISFLT*KVSTIG Trigger: TCCTATTGTGGATACCTTCAAAGTGAGGAAGGAAAT...TCCAGATGTGACTTTGGGTTCCATGTGGTTGGCTGTATAATTTGTGTAAAATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS GCA 72 bp | GCCTCCACTGTCAGAGATGGAGCTGGTGATATCCAGTaGTTCCCGGTACCAGTAATAGGTGGTGGCAGAACT | + |
|
Preference number: 6 (lower is better) Translates to: ASTVRDGAGDIQ*FPVPVIGGGRT Trigger: AGTTCTGCCACCACCTATTACTGGTACCGGGAAGCACTGGATATCACCAGCTCCATCTCTGACAGTGGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS TCA 72 bp | TCCAGTTTAAGCCTCCACTGTCAGAGATGGAGCTGGTaGTATCCAGTGCTTCCCGGTACCAGTAATAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SSLSLHCQRWSW*YPVLPGTSNRW Trigger: CCACCTATTACTGGTACCGGGAAGCACTGGATATCACCAGCTCCATCTCTGACAGTGGAGGCTTAAACTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS GCA 72 bp | CATCCCCCACATCGGGTAGCTCAGAAATTCTTCCGATaGCTTCTCCTTGATCCATGCATTATATCCGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: HPPHRVAQKFFR*LLLDPCIISGR Trigger: CCTCCCGGATATAATGCATGGATCAAGGAGAAGGCATCGGAAGAATTTCTGAGCTACCCGATGTGGGGGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS CAA 72 bp | ACGGAGGCCAAGTTACCAGAACTATCATCTATGAGGTaGCAGCGACGAATGATGAACACCACTGGGACAGGA | + |
|
Preference number: 6 (lower is better) Translates to: TEAKLPELSSMR*QRRMMNTTGTG Trigger: TCCTGTCCCAGTGGTGTTCATCATTCGTCGCTGCAACCTCATAGATGATAGTTCTGGTAACTTGGCCTCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS CCA 72 bp | TGTCTGCCATCAAATACCCAATCCCATAGCGTCCATTaGGAGCAGTATCCAGTGTTGGGGAACCACTTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: CLPSNTQSHSVH*EQYPVLGNHFV Trigger: AACAAAGTGGTTCCCCAACACTGGATACTGCTCCCAATGGACGCTATGGGATTGGGTATTTGATGGCAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS TCA 72 bp | TTGGAGATGACATTTCACTCGGTATCTTTCCATGAATaGGGCTTGCGTCATCTCCTTCCAAGTTCACAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LEMTFHSVSFHE*GLRHLLPSSQV Trigger: AACCTGTGAACTTGGAAGGAGATGACGCAAGCCTCATTCATGGAAAGATACCGAGTGAAATGTCATCTCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS GCA 72 bp | ACTTTGTTCACATTCTGGCTCAACATAAGTATGAGATaGGTTTTTCACCAGGGGGCATTGATCCCAAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: TLFTFWLNISMR*VFHQGALIPRK Trigger: CTTCCTTGGGATCAATGCCCCCTGGTGAAAAACGCATCTCATACTTATGTTGAGCCAGAATGTGAACAAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS GCA 72 bp | TCCAGAGCGCTGCACGAATATCAAGCCAATACAAAATaGCAGGAGGCAACAGATAACAGTGAGTATTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SRALHEYQANTK*QEATDNSEYFL Trigger: AAGGAAATACTCACTGTTATCTGTTGCCTCCTGGCATTTTGTATTGGCTTGATATTCGTGCAGCGCTCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS CAA 90 bp | AGGGCTTATGTAATTCCAAACCCCAATGCTGCCTCTTCGAATTCTTaGACCCACAGAAAGTTCCAGGAAAAAGAGTGGAATTCCTATCAC | + |
|
Preference number: 6 (lower is better) Translates to: RAYVIPNPNAASSNS*THRKFQEKEWNSYH Trigger: GTGATAGGAATTCCACTCTTTTTCCTGGAACTTTCTGTGGGTCAAAGAATTCGAAGAGGCAGCATTGGGGTTTGGAATTACATAAGCCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS CCA 72 bp | CCAGTAATAGGTGGTGGCAGAACTTTGTTCACATTCTaGCTCAACATAAGTATGAGATGCGTTTTTCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: PVIGGGRTLFTF*LNISMRCVFHQ Trigger: CTGGTGAAAAACGCATCTCATACTTATGTTGAGCCAGAATGTGAACAAAGTTCTGCCACCACCTATTACTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS CAA 90 bp | AATGCCAGGAGGCAACAGATAACAGTGAGTATTTCCTTCCTCACTTaGAAGGTATCCACAATAGGAGTGATGATCCCTTCAATTGTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: NARRQQITVSISFLT*KVSTIGVMIPSIVP Trigger: TGGAACAATTGAAGGGATCATCACTCCTATTGTGGATACCTTCAAAGTGAGGAAGGAAATACTCACTGTTATCTGTTGCCTCCTGGCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS TCA 72 bp | AACAGAGAACTGAAATACATGATTTTTCCAGAGGACTaGATGCCTTTGATCATGGCCAGACAAACCATGACC | + |
|
Preference number: 6 (lower is better) Translates to: NRELKYMIFPED*MPLIMARQTMT Trigger: GGTCATGGTTTGTCTGGCCATGATCAAAGGCATTCAGTCCTCTGGAAAAATCATGTATTTCAGTTCTCTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS CCA 72 bp | AATCCCATAGCGTCCATTGGGAGCAGTATCCAGTGTTaGGGAACCACTTTGTTTTCGATAAATATTTTTACC | + |
|
Preference number: 6 (lower is better) Translates to: NPIASIGSSIQC*GTTLFSINIFT Trigger: GGTAAAAATATTTATCGAAAACAAAGTGGTTCCCCAACACTGGATACTGCTCCCAATGGACGCTATGGGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS CAA 72 bp | AGGCAACAGATAACAGTGAGTATTTCCTTCCTCACTTaGAAGGTATCCACAATAGGAGTGATGATCCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RQQITVSISFLT*KVSTIGVMIPS Trigger: TGAAGGGATCATCACTCCTATTGTGGATACCTTCAAAGTGAGGAAGGAAATACTCACTGTTATCTGTTGCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
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| CDS TCA 72 bp | AGTTGTTGTCTCTCTTGTTATAACTTGAAAACGCGATaGCTCCACCAAATCCCAAACCCAATGCAAAGAACA | + |
|
Preference number: 6 (lower is better) Translates to: SCCLSCYNLKTR*LHQIPNPMQRT Trigger: TGTTCTTTGCATTGGGTTTGGGATTTGGTGGAGTCATCGCGTTTTCAAGTTATAACAAGAGAGACAACAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 |
||
| CDS TCA 72 bp | TCAGATCCATCTTCAGCATCTGTATCTTTCTCTTCCTaGACATCGACAATTAGTTCACTCTTCTTAGAAACC | + |
|
Preference number: 6 (lower is better) Translates to: SDPSSASVSFSS*TSTISSLFLET Trigger: GGTTTCTAAGAAGAGTGAACTAATTGTCGATGTTCAGGAAGAGAAAGATACAGATGCTGAAGATGGATCTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074204.12 ENSMUST00000179636.3 ENSMUST00000217905.2 |
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