Pregenerated sensors for SLC6A13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030108Ensembl transcript IDs: ENSMUST00000064580.14, ENSMUST00000142419.2
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCAGCCCTCCCTGGGCTTCCCAAGCTGCCTCAATGGGATGTTATTaGTTCGGGCACGTCACAATGTGTGGACCACCCTGGAATAGGGGC | + |
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Preference number: 1 (lower is better) Translates to: PSPPWASQAASMGCY*FGHVTMCGPPWNRG Trigger: GCCCCTATTCCAGGGTGGTCCACACATTGTGACGTGCCCGAATCAATAACATCCCATTGAGGCAGCTTGGGAAGCCCAGGGAGGGCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR TCA 90 bp | GTTCCGCCCCTCTGCCTCTATAGCTGCCCCCACAGCCAGGCTCACAGGTGTGTCAGCTTCCCAGGGCCGTaGGGCACCCCAGACAGATGG | + |
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Preference number: 4 (lower is better) Translates to: VPPLCLYSCPHSQAHRCVSFPGP*GTPDRW Trigger: CCATCTGTCTGGGGTGCCTCACGGCCCTGGGAAGCT...GACACACCTGTGAGCCTGGCTGTGGGGGCAGCTATAGAGGCAGAGGGGCGGAAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR TCA 90 bp | GTTCCGCCCCTCTGCCTCTATAGCTGCCCCCACAGCCAGGCTCACAGGTGTGTCTTCTCCTCCAGGCTGTaGTGCCTCCCTGGTTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: VPPLCLYSCPHSQAHRCVFSSRL*CLPGWC Trigger: ACACCAACCAGGGAGGCATCACAGCCTGGAGGAGAA...GACACACCTGTGAGCCTGGCTGTGGGGGCAGCTATAGAGGCAGAGGGGCGGAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR TCA 90 bp | TGCCTCTATAGCTGCCCCCACAGCCAGGCTCACAGGTGTGTCAAAGGCCCTGGCGCTGACGATCATCTGTaGGGCATAGCCGATGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: CLYSCPHSQAHRCVKGPGADDHL*GIADAF Trigger: GAAGGCATCGGCTATGCCTCACAGATGATCGTCAGC...GCCAGGGCCTTTGACACACCTGTGAGCCTGGCTGTGGGGGCAGCTATAGAGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR TCA 90 bp | TGCCTCTATAGCTGCCCCCACAGCCAGGCTCACAGGTGTGTCAAAGGCCCTGGCAAGGGAAAGTGGCTGTaGAGTAGACCACCTTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: CLYSCPHSQAHRCVKGPGKGKWL*SRPPCP Trigger: CGGGCAAGGTGGTCTACTTCACAGCCACTTTCCCTT...GCCAGGGCCTTTGACACACCTGTGAGCCTGGCTGTGGGGGCAGCTATAGAGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR CCA 90 bp | GTTCCGCCCCTCTGCCTCTATAGCTGCCCCCACAGCCAGGCTCACAGGTGTGTCTCTGTATTCCACTCATaGCTGCAACTTCCCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: VPPLCLYSCPHSQAHRCVSVFHS*LQLPQG Trigger: CCCCTGGGGAAGTTGCAGCCATGAGTGGAATACAGA...GACACACCTGTGAGCCTGGCTGTGGGGGCAGCTATAGAGGCAGAGGGGCGGAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR GCA 90 bp | GTTCCGCCCCTCTGCCTCTATAGCTGCCCCCACAGCCAGGCTCACAGGTGTGTCTCCTCAGCTTGTAGATaGTCCAGGCAGGAATGCAGA | + |
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Preference number: 4 (lower is better) Translates to: VPPLCLYSCPHSQAHRCVSSACR*SRQECR Trigger: TCTGCATTCCTGCCTGGAGCATCTACAAGCTGAGGA...GACACACCTGTGAGCCTGGCTGTGGGGGCAGCTATAGAGGCAGAGGGGCGGAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR CCA 90 bp | GTTCCGCCCCTCTGCCTCTATAGCTGCCCCCACAGCCAGGCTCACAGGTGTGTCCGATGCCTTCAAAGATaGGACAGATTCTCCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: VPPLCLYSCPHSQAHRCVRCLQR*DRFSSR Trigger: CCTGGAGGAGAATCTGTCCCATCTTTGAAGGCATCG...GACACACCTGTGAGCCTGGCTGTGGGGGCAGCTATAGAGGCAGAGGGGCGGAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR CCA 90 bp | TGCCTCTATAGCTGCCCCCACAGCCAGGCTCACAGGTGTGTCAAAGGCCCTGGCGCAGTTGGCTCTGGTTaGTTCTTCTGGGGAAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: CLYSCPHSQAHRCVKGPGAVGSG*FFWGRS Trigger: AGACCTTCCCCAGAAGAACCAACCAGAGCCAACTGC...GCCAGGGCCTTTGACACACCTGTGAGCCTGGCTGTGGGGGCAGCTATAGAGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR TCA 90 bp | TGCCTCTATAGCTGCCCCCACAGCCAGGCTCACAGGTGTGTCAAAGGCCCTGGCGATCCCACAGACGTGTaGTGTTGGGGTACAGGTAAA | + |
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Preference number: 4 (lower is better) Translates to: CLYSCPHSQAHRCVKGPGDPTDV*CWGTGK Trigger: TTTACCTGTACCCCAACATCACACGTCTGTGGGATC...GCCAGGGCCTTTGACACACCTGTGAGCCTGGCTGTGGGGGCAGCTATAGAGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR CCA 90 bp | TGCCTCTATAGCTGCCCCCACAGCCAGGCTCACAGGTGTGTCAAAGGCCCTGGCTTGTCTCTCCATTACTaGTTGTTCCCGAGGCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CLYSCPHSQAHRCVKGPGLSLHY*LFPRPC Trigger: ACAGGGCCTCGGGAACAACCAGTAATGGAGAGACAA...GCCAGGGCCTTTGACACACCTGTGAGCCTGGCTGTGGGGGCAGCTATAGAGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR CCA 90 bp | GTTCCGCCCCTCTGCCTCTATAGCTGCCCCCACAGCCAGGCTCACAGGTGTGTCTCTACACACACAAACTaGCTATCTAGTCCCAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: VPPLCLYSCPHSQAHRCVSTHTN*LSSPRR Trigger: TCTCCTGGGACTAGATAGCCAGTTTGTGTGTGTAGA...GACACACCTGTGAGCCTGGCTGTGGGGGCAGCTATAGAGGCAGAGGGGCGGAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR CCA 90 bp | GATAGGAGGTACCCAGTTCAGAAGGTGAGTCCCAAATACCCCCTTTCGTCTTTCAGGGACCCCAGGTGCTaGATGCCATCCGAGAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: DRRYPVQKVSPKYPLSSFRDPRC*MPSESF Trigger: GAAGCTCTCGGATGGCATCCAGCACCTGGGGTCCCT...GAAAGACGAAAGGGGGTATTTGGGACTCACCTTCTGAACTGGGTACCTCCTATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR GCA 90 bp | GATAGGAGGTACCCAGTTCAGAAGGTGAGTCCCAAATACCCCCTTTCGTCTTTCACCCCAGGTGCTGGATaGCATCCGAGAGCTTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: DRRYPVQKVSPKYPLSSFTPGAG*HPRASG Trigger: TCCTGAAGCTCTCGGATGGCATCCAGCACCTGGGGT...GAAAGACGAAAGGGGGTATTTGGGACTCACCTTCTGAACTGGGTACCTCCTATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR CCA 90 bp | GATAGGAGGTACCCAGTTCAGAAGGTGAGTCCCAAATACCCCCTTTCGTCTTTCGCATCCATCCACACCTaGGGATCCCACAGACGTGTG | + |
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Preference number: 4 (lower is better) Translates to: DRRYPVQKVSPKYPLSSFASIHT*GSHRRV Trigger: CACACGTCTGTGGGATCCCCAGGTGTGGATGGATGC...GAAAGACGAAAGGGGGTATTTGGGACTCACCTTCTGAACTGGGTACCTCCTATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR CCA 90 bp | GTTCCGCCCCTCTGCCTCTATAGCTGCCCCCACAGCCAGGCTCACAGGTGTGTCTTTGATAAGAGGCCATaGCTTATACCCAATCATATC | + |
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Preference number: 4 (lower is better) Translates to: VPPLCLYSCPHSQAHRCVFDKRP*LIPNHI Trigger: GATATGATTGGGTATAAGCCATGGCCTCTTATCAAA...GACACACCTGTGAGCCTGGCTGTGGGGGCAGCTATAGAGGCAGAGGGGCGGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR TCA 90 bp | GATAGGAGGTACCCAGTTCAGAAGGTGAGTCCCAAATACCCCCTTTCGTCTTTCCGTTGCCTAAGCCAATaGTCTCCCCAGCCACAGACA | + |
|
Preference number: 4 (lower is better) Translates to: DRRYPVQKVSPKYPLSSFRCLSQ*SPQPQT Trigger: TGTCTGTGGCTGGGGAGATCATTGGCTTAGGCAACG...GAAAGACGAAAGGGGGTATTTGGGACTCACCTTCTGAACTGGGTACCTCCTATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR TCA 90 bp | AAGTTGGATTTAATGACATGGAAGGAAGAGGGCCCAGCAACAAGCCAGGCTTTTAGCTGGTGCTGCTGTTaGGGATGCAAAGGGCGATGC | + |
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Preference number: 4 (lower is better) Translates to: KLDLMTWKEEGPATSQAFSWCCC*GCKGRC Trigger: GCATCGCCCTTTGCATCCTCAACAGCAGCACCAGCT...AAAAGCCTGGCTTGTTGCTGGGCCCTCTTCCTTCCATGTCATTAAATCCAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR CCA 90 bp | GATAGGAGGTACCCAGTTCAGAAGGTGAGTCCCAAATACCCCCTTTCGTCTTTCCCTCCACTTTCTCCATaGCTGGACACACTGGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: DRRYPVQKVSPKYPLSSFPPLSP*LDTLAL Trigger: CAAAGCCAGTGTGTCCAGCCATGGAGAAAGTGGAGG...GAAAGACGAAAGGGGGTATTTGGGACTCACCTTCTGAACTGGGTACCTCCTATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR CCA 90 bp | GATAGGAGGTACCCAGTTCAGAAGGTGAGTCCCAAATACCCCCTTTCGTCTTTCAGGAGCAGTTGGCTCTaGTTGGTTCTTCTGGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: DRRYPVQKVSPKYPLSSFRSSWL*LVLLGK Trigger: CTTCCCCAGAAGAACCAACCAGAGCCAACTGCTCCT...GAAAGACGAAAGGGGGTATTTGGGACTCACCTTCTGAACTGGGTACCTCCTATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR TCA 90 bp | AAGTTGGATTTAATGACATGGAAGGAAGAGGGCCCAGCAACAAGCCAGGCTTTTTGCCAGGCCAGGGCCTaGTTCAGCAACCTCAGATAT | + |
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Preference number: 4 (lower is better) Translates to: KLDLMTWKEEGPATSQAFCQARA*FSNLRY Trigger: ATATCTGAGGTTGCTGAATCAGGCCCTGGCCTGGCA...AAAAGCCTGGCTTGTTGCTGGGCCCTCTTCCTTCCATGTCATTAAATCCAACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR TCA 90 bp | AAGTTGGATTTAATGACATGGAAGGAAGAGGGCCCAGCAACAAGCCAGGCTTTTCCAGGAGAACGACCATaGAGAAGAAACAGCAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: KLDLMTWKEEGPATSQAFPGERP*RRNSRP Trigger: GGGCCTGCTGTTTCTTCTTCATGGTCGTTCTCCTGG...AAAAGCCTGGCTTGTTGCTGGGCCCTCTTCCTTCCATGTCATTAAATCCAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR TCA 90 bp | GATAGGAGGTACCCAGTTCAGAAGGTGAGTCCCAAATACCCCCTTTCGTCTTTCTCAGTGGCGTGTATTTaGTCAGGGAGAACAGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: DRRYPVQKVSPKYPLSSFSVACI*SGRTGR Trigger: CCTTCCTGTTCTCCCTGATCAAATACACGCCACTGA...GAAAGACGAAAGGGGGTATTTGGGACTCACCTTCTGAACTGGGTACCTCCTATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR GCA 90 bp | GATAGGAGGTACCCAGTTCAGAAGGTGAGTCCCAAATACCCCCTTTCGTCTTTCATCTTGTTGTTCCAGTaGTCCCGTTCCAGGGTACCA | + |
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Preference number: 4 (lower is better) Translates to: DRRYPVQKVSPKYPLSSFILLFQ*SRSRVP Trigger: TGGTACCCTGGAACGGGAGCACTGGAACAACAAGAT...GAAAGACGAAAGGGGGTATTTGGGACTCACCTTCTGAACTGGGTACCTCCTATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR CCA 90 bp | AAGTTGGATTTAATGACATGGAAGGAAGAGGGCCCAGCAACAAGCCAGGCTTTTTCTGGTTGGTTCTTCTaGGGAAGGTCTTCAGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: KLDLMTWKEEGPATSQAFSGWFF*GRSSAG Trigger: CCCGGCTGAAGACCTTCCCCAGAAGAACCAACCAGA...AAAAGCCTGGCTTGTTGCTGGGCCCTCTTCCTTCCATGTCATTAAATCCAACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR TCA 90 bp | GATAGGAGGTACCCAGTTCAGAAGGTGAGTCCCAAATACCCCCTTTCGTCTTTCGGCACACAGCTGGCGTaGAAAAGAGCCAACAATATT | + |
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Preference number: 4 (lower is better) Translates to: DRRYPVQKVSPKYPLSSFGTQLA*KRANNI Trigger: AATATTGTTGGCTCTTTTTCACGCCAGCTGTGTGCC...GAAAGACGAAAGGGGGTATTTGGGACTCACCTTCTGAACTGGGTACCTCCTATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR GCA 90 bp | AAGTTGGATTTAATGACATGGAAGGAAGAGGGCCCAGCAACAAGCCAGGCTTTTTGCTCCAGGCAGGAATaGAGATCATGGAGGACAGAG | + |
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Preference number: 4 (lower is better) Translates to: KLDLMTWKEEGPATSQAFCSRQE*RSWRTE Trigger: CTCTGTCCTCCATGATCTGCATTCCTGCCTGGAGCA...AAAAGCCTGGCTTGTTGCTGGGCCCTCTTCCTTCCATGTCATTAAATCCAACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR CCA 90 bp | GATAGGAGGTACCCAGTTCAGAAGGTGAGTCCCAAATACCCCCTTTCGTCTTTCCATGGCTGGACACACTaGCTTTGTCTCTCCATTACT | + |
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Preference number: 4 (lower is better) Translates to: DRRYPVQKVSPKYPLSSFHGWTH*LCLSIT Trigger: AGTAATGGAGAGACAAAGCCAGTGTGTCCAGCCATG...GAAAGACGAAAGGGGGTATTTGGGACTCACCTTCTGAACTGGGTACCTCCTATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR CCA 90 bp | AAGTTGGATTTAATGACATGGAAGGAAGAGGGCCCAGCAACAAGCCAGGCTTTTCACTTTCTCCATGGCTaGACACACTGGCTTTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: KLDLMTWKEEGPATSQAFHFLHG*THWLCL Trigger: GAGACAAAGCCAGTGTGTCCAGCCATGGAGAAAGTG...AAAAGCCTGGCTTGTTGCTGGGCCCTCTTCCTTCCATGTCATTAAATCCAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR CCA 90 bp | GATAGGAGGTACCCAGTTCAGAAGGTGAGTCCCAAATACCCCCTTTCGTCTTTCCTTGTTGTAGGTCAGTaGCGTGTATTTGATCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: DRRYPVQKVSPKYPLSSFLVVGQ*RVFDQG Trigger: TCCCTGATCAAATACACGCCACTGACCTACAACAAG...GAAAGACGAAAGGGGGTATTTGGGACTCACCTTCTGAACTGGGTACCTCCTATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR CCA 90 bp | GATAGGAGGTACCCAGTTCAGAAGGTGAGTCCCAAATACCCCCTTTCGTCTTTCGAATCATTGGCCTTCTaGAATTCCACACAGTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: DRRYPVQKVSPKYPLSSFESLAF*NSTQFS Trigger: AGAAAACTGTGTGGAATTCCAGAAGGCCAATGATTC...GAAAGACGAAAGGGGGTATTTGGGACTCACCTTCTGAACTGGGTACCTCCTATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR CCA 90 bp | AAGTTGGATTTAATGACATGGAAGGAAGAGGGCCCAGCAACAAGCCAGGCTTTTCATTCATGGAATCATTaGCCTTCTGGAATTCCACAC | + |
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Preference number: 4 (lower is better) Translates to: KLDLMTWKEEGPATSQAFHSWNH*PSGIPH Trigger: GTGTGGAATTCCAGAAGGCCAATGATTCCATGAATG...AAAAGCCTGGCTTGTTGCTGGGCCCTCTTCCTTCCATGTCATTAAATCCAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR CAA 90 bp | GTTCCGCCCCTCTGCCTCTATAGCTGCCCCCACAGCCAGGCTCACAGGTGTGTCGTGATGCCTCCCTGGTaGGTGTACTGGCCAAGCGCT | + |
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Preference number: 5 (lower is better) Translates to: VPPLCLYSCPHSQAHRCVVMPPW*VYWPSA Trigger: AGCGCTTGGCCAGTACACCAACCAGGGAGGCATCAC...GACACACCTGTGAGCCTGGCTGTGGGGGCAGCTATAGAGGCAGAGGGGCGGAAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR CAA 90 bp | TGCCTCTATAGCTGCCCCCACAGCCAGGCTCACAGGTGTGTCAAAGGCCCTGGCAGCAGTTGGCTCTGGTaGGTTCTTCTGGGGAAGGTC | + |
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Preference number: 5 (lower is better) Translates to: CLYSCPHSQAHRCVKGPGSSWLW*VLLGKV Trigger: GACCTTCCCCAGAAGAACCAACCAGAGCCAACTGCT...GCCAGGGCCTTTGACACACCTGTGAGCCTGGCTGTGGGGGCAGCTATAGAGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR CAA 90 bp | TGCCTCTATAGCTGCCCCCACAGCCAGGCTCACAGGTGTGTCAAAGGCCCTGGCGTGTCGCAGGAGCAGTaGGCTCTGGTTGGTTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: CLYSCPHSQAHRCVKGPGVSQEQ*ALVGSS Trigger: AGAAGAACCAACCAGAGCCAACTGCTCCTGCGACAC...GCCAGGGCCTTTGACACACCTGTGAGCCTGGCTGTGGGGGCAGCTATAGAGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS CCA 90 bp | TCTGGTTGGTTCTTCTGGGGAAGGTCTTCAGCCGGGCACACGAGCTaGCGAAGTCTCTCTCTGAGTGGGCCCTTGAGAGTCCTCAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: SGWFFWGRSSAGHTS*RSLSLSGPLRVLSL Trigger: CAAGCTGAGGACTCTCAAGGGCCCACTCAGAGAGAGACTTCGCCAGCTCGTGTGCCCGGCTGAAGACCTTCCCCAGAAGAACCAACCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR CAA 90 bp | GTTCCGCCCCTCTGCCTCTATAGCTGCCCCCACAGCCAGGCTCACAGGTGTGTCCTGGACACACTGGCTTaGTCTCTCCATTACTGGTTG | + |
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Preference number: 5 (lower is better) Translates to: VPPLCLYSCPHSQAHRCVLDTLA*SLHYWL Trigger: CAACCAGTAATGGAGAGACAAAGCCAGTGTGTCCAG...GACACACCTGTGAGCCTGGCTGTGGGGGCAGCTATAGAGGCAGAGGGGCGGAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS CCA 90 bp | GTGCTCCCGTTCCAGGGTACCATCTTCCTCCACTTTCTCCATGGCTaGACACACTGGCTTTGTCTCTCCATTACTGGTTGTTCCCGAGGC | + |
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Preference number: 5 (lower is better) Translates to: VLPFQGTIFLHFLHG*THWLCLSITGCSRG Trigger: GCCTCGGGAACAACCAGTAATGGAGAGACAAAGCCAGTGTGTCCAGCCATGGAGAAAGTGGAGGAAGATGGTACCCTGGAACGGGAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064580.14 ENSMUST00000142419.2 |
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| CDS CCA 90 bp | TCCAGTGCTCCCGTTCCAGGGTACCATCTTCCTCCACTTTCTCCATaGCTGGACACACTGGCTTTGTCTCTCCATTACTGGTTGTTCCCG | + |
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Preference number: 5 (lower is better) Translates to: SSAPVPGYHLPPLSP*LDTLALSLHYWLFP Trigger: CGGGAACAACCAGTAATGGAGAGACAAAGCCAGTGTGTCCAGCCATGGAGAAAGTGGAGGAAGATGGTACCCTGGAACGGGAGCACTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064580.14 ENSMUST00000142419.2 |
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| CDS GCA 90 bp | CAGACGTGTGATGTTGGGGTACAGGTAAAACTGAATTCCTTGGGCTaGTCCGGGCAGTGTCACTCCTCGAATCAACAGGACCACCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: QTCDVGVQVKLNSLG*SGQCHSSNQQDHQH Trigger: ATGCTGGTGGTCCTGTTGATTCGAGGAGTGACACTGCCCGGAGCAGCCCAAGGAATTCAGTTTTACCTGTACCCCAACATCACACGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR CAA 90 bp | TGCCTCTATAGCTGCCCCCACAGCCAGGCTCACAGGTGTGTCAAAGGCCCTGGCAAGAGCCAACAATATTaGATAAGAGGCCATGGCTTA | + |
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Preference number: 5 (lower is better) Translates to: CLYSCPHSQAHRCVKGPGKSQQY*IRGHGL Trigger: TAAGCCATGGCCTCTTATCAAATATTGTTGGCTCTT...GCCAGGGCCTTTGACACACCTGTGAGCCTGGCTGTGGGGGCAGCTATAGAGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR CAA 90 bp | GATAGGAGGTACCCAGTTCAGAAGGTGAGTCCCAAATACCCCCTTTCGTCTTTCTCTCTCCATTACTGGTaGTTCCCGAGGCCCTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: DRRYPVQKVSPKYPLSSFSLHYW*FPRPCS Trigger: AGAACAGGGCCTCGGGAACAACCAGTAATGGAGAGA...GAAAGACGAAAGGGGGTATTTGGGACTCACCTTCTGAACTGGGTACCTCCTATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS CCA 90 bp | CGTGTATTTGATCAGGGAGAACAGGAAGGTCGCCAGGCACACAGCTaGCGTGAAAAAGAGCCAACAATATTTGATAAGAGGCCATGGCTT | + |
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Preference number: 5 (lower is better) Translates to: RVFDQGEQEGRQAHS*REKEPTIFDKRPWL Trigger: AAGCCATGGCCTCTTATCAAATATTGTTGGCTCTTTTTCACGCCAGCTGTGTGCCTGGCGACCTTCCTGTTCTCCCTGATCAAATACACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS-3UTR CAA 90 bp | AAGTTGGATTTAATGACATGGAAGGAAGAGGGCCCAGCAACAAGCCAGGCTTTTGTAAAACTGAATTCCTaGGGCTGCTCCGGGCAGTGT | + |
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Preference number: 5 (lower is better) Translates to: KLDLMTWKEEGPATSQAFVKLNS*GCSGQC Trigger: ACACTGCCCGGAGCAGCCCAAGGAATTCAGTTTTAC...AAAAGCCTGGCTTGTTGCTGGGCCCTCTTCCTTCCATGTCATTAAATCCAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS TCA 90 bp | TTTCTACACACACAAACTGGCTATCTAGTCCCAGGAGAACGACCATaGAGAAGAAACAGCAGGCCCACAACGGTGAGAAGGGTAACATCA | + |
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Preference number: 5 (lower is better) Translates to: FLHTQTGYLVPGERP*RRNSRPTTVRRVTS Trigger: TGATGTTACCCTTCTCACCGTTGTGGGCCTGCTGTTTCTTCTTCATGGTCGTTCTCCTGGGACTAGATAGCCAGTTTGTGTGTGTAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS CCA 72 bp | GGTGTCGCAGGAGCAGTTGGCTCTGGTTGGTTCTTCTaGGGAAGGTCTTCAGCCGGGCACACGAGCTGGCGA | + |
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Preference number: 6 (lower is better) Translates to: GVAGAVGSGWFF*GRSSAGHTSWR Trigger: TCGCCAGCTCGTGTGCCCGGCTGAAGACCTTCCCCAGAAGAACCAACCAGAGCCAACTGCTCCTGCGACACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS CCA 72 bp | AGCCGGGCACACGAGCTGGCGAAGTCTCTCTCTGAGTaGGCCCTTGAGAGTCCTCAGCTTGTAGATGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: SRAHELAKSLSE*ALESPQLVDAP Trigger: TGGAGCATCTACAAGCTGAGGACTCTCAAGGGCCCACTCAGAGAGAGACTTCGCCAGCTCGTGTGCCCGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS CCA 72 bp | GATGTCATCGGTGTCGCAGGAGCAGTTGGCTCTGGTTaGTTCTTCTGGGGAAGGTCTTCAGCCGGGCACACG | + |
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Preference number: 6 (lower is better) Translates to: DVIGVAGAVGSG*FFWGRSSAGHT Trigger: CGTGTGCCCGGCTGAAGACCTTCCCCAGAAGAACCAACCAGAGCCAACTGCTCCTGCGACACCGATGACATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS CAA 90 bp | GGGTACCATCTTCCTCCACTTTCTCCATGGCTGGACACACTGGCTTaGTCTCTCCATTACTGGTTGTTCCCGAGGCCCTGTTCTCCATCC | + |
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Preference number: 6 (lower is better) Translates to: GYHLPPLSPWLDTLA*SLHYWLFPRPCSPS Trigger: GGATGGAGAACAGGGCCTCGGGAACAACCAGTAATGGAGAGACAAAGCCAGTGTGTCCAGCCATGGAGAAAGTGGAGGAAGATGGTACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142419.2 |
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| CDS CCA 72 bp | CCCGTTCCAGGGTACCATCTTCCTCCACTTTCTCCATaGCTGGACACACTGGCTTTGTCTCTCCATTACTGG | + |
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Preference number: 6 (lower is better) Translates to: PVPGYHLPPLSP*LDTLALSLHYW Trigger: CCAGTAATGGAGAGACAAAGCCAGTGTGTCCAGCCATGGAGAAAGTGGAGGAAGATGGTACCCTGGAACGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064580.14 ENSMUST00000142419.2 |
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| CDS CAA 72 bp | CTTCCTCCACTTTCTCCATGGCTGGACACACTGGCTTaGTCTCTCCATTACTGGTTGTTCCCGAGGCCCTGT | + |
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Preference number: 6 (lower is better) Translates to: LPPLSPWLDTLA*SLHYWLFPRPC Trigger: ACAGGGCCTCGGGAACAACCAGTAATGGAGAGACAAAGCCAGTGTGTCCAGCCATGGAGAAAGTGGAGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064580.14 ENSMUST00000142419.2 |
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| CDS CAA 90 bp | ATCCCACAGACGTGTGATGTTGGGGTACAGGTAAAACTGAATTCCTaGGGCTGCTCCGGGCAGTGTCACTCCTCGAATCAACAGGACCAC | + |
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Preference number: 6 (lower is better) Translates to: IPQTCDVGVQVKLNS*GCSGQCHSSNQQDH Trigger: GTGGTCCTGTTGATTCGAGGAGTGACACTGCCCGGAGCAGCCCAAGGAATTCAGTTTTACCTGTACCCCAACATCACACGTCTGTGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS GCA 72 bp | GATGTTGGGGTACAGGTAAAACTGAATTCCTTGGGCTaGTCCGGGCAGTGTCACTCCTCGAATCAACAGGAC | + |
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Preference number: 6 (lower is better) Translates to: DVGVQVKLNSLG*SGQCHSSNQQD Trigger: GTCCTGTTGATTCGAGGAGTGACACTGCCCGGAGCAGCCCAAGGAATTCAGTTTTACCTGTACCCCAACATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS TCA 72 bp | ACACAAACTGGCTATCTAGTCCCAGGAGAACGACCATaGAGAAGAAACAGCAGGCCCACAACGGTGAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: TQTGYLVPGERP*RRNSRPTTVRR Trigger: CCTTCTCACCGTTGTGGGCCTGCTGTTTCTTCTTCATGGTCGTTCTCCTGGGACTAGATAGCCAGTTTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS TCA 72 bp | ACGTGTACTTCTTGTTGTAGGTCAGTGGCGTGTATTTaGTCAGGGAGAACAGGAAGGTCGCCAGGCACACAG | + |
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Preference number: 6 (lower is better) Translates to: TCTSCCRSVACI*SGRTGRSPGTQ Trigger: CTGTGTGCCTGGCGACCTTCCTGTTCTCCCTGATCAAATACACGCCACTGACCTACAACAAGAAGTACACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS CCA 72 bp | CCACCATGGGTACGTGTACTTCTTGTTGTAGGTCAGTaGCGTGTATTTGATCAGGGAGAACAGGAAGGTCGC | + |
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Preference number: 6 (lower is better) Translates to: PPWVRVLLVVGQ*RVFDQGEQEGR Trigger: GCGACCTTCCTGTTCTCCCTGATCAAATACACGCCACTGACCTACAACAAGAAGTACACGTACCCATGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS CAA 72 bp | ACGTGTGATGTTGGGGTACAGGTAAAACTGAATTCCTaGGGCTGCTCCGGGCAGTGTCACTCCTCGAATCAA | + |
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Preference number: 6 (lower is better) Translates to: TCDVGVQVKLNS*GCSGQCHSSNQ Trigger: TTGATTCGAGGAGTGACACTGCCCGGAGCAGCCCAAGGAATTCAGTTTTACCTGTACCCCAACATCACACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS CCA 72 bp | TTCCAGGGTACCATCTTCCTCCACTTTCTCCATGGCTaGACACACTGGCTTTGTCTCTCCATTACTGGTTGT | + |
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Preference number: 6 (lower is better) Translates to: FQGTIFLHFLHG*THWLCLSITGC Trigger: ACAACCAGTAATGGAGAGACAAAGCCAGTGTGTCCAGCCATGGAGAAAGTGGAGGAAGATGGTACCCTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064580.14 ENSMUST00000142419.2 |
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| CDS CAA 90 bp | ATGACAGGGGAGGTGGCATTCTCGGAGGTCACATTCATGGAATCATaGGCCTTCTGGAATTCCACACAGTTTTCTGTATTCCACTCATGG | + |
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Preference number: 6 (lower is better) Translates to: MTGEVAFSEVTFMES*AFWNSTQFSVFHSW Trigger: CCATGAGTGGAATACAGAAAACTGTGTGGAATTCCAGAAGGCCAATGATTCCATGAATGTGACCTCCGAGAATGCCACCTCCCCTGTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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| CDS CCA 72 bp | TTCTCGGAGGTCACATTCATGGAATCATTGGCCTTCTaGAATTCCACACAGTTTTCTGTATTCCACTCATGG | + |
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Preference number: 6 (lower is better) Translates to: FSEVTFMESLAF*NSTQFSVFHSW Trigger: CCATGAGTGGAATACAGAAAACTGTGTGGAATTCCAGAAGGCCAATGATTCCATGAATGTGACCTCCGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064580.14 ENSMUST00000142419.2 |
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| CDS CAA 72 bp | AGGCACACAGCTGGCGTGAAAAAGAGCCAACAATATTaGATAAGAGGCCATGGCTTATACCCAATCATATCC | + |
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Preference number: 6 (lower is better) Translates to: RHTAGVKKSQQY*IRGHGLYPIIS Trigger: GGATATGATTGGGTATAAGCCATGGCCTCTTATCAAATATTGTTGGCTCTTTTTCACGCCAGCTGTGTGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064580.14 |
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