Pregenerated sensors for SLC6A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030310Ensembl transcript IDs: ENSMUST00000032454.8, ENSMUST00000204074.2
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGCCCGGGTCACAGGGTCACAGGGACAGAGGACCCTCTCCGCACTaGTCTGTGAACAGTCTGGGGGTGGGTCCTGGAAGCTGCCTCAGG | + |
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Preference number: 1 (lower is better) Translates to: LPGSQGHRDRGPSPH*SVNSLGVGPGSCLR Trigger: CCTGAGGCAGCTTCCAGGACCCACCCCCAGACTGTTCACAGATCAGTGCGGAGAGGGTCCTCTGTCCCTGTGACCCTGTGACCCGGGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| 3UTR TCA 90 bp | GGTCACAGGGTCACAGGGACAGAGGACCCTCTCCGCACTGATCTGTaGACAGTCTGGGGGTGGGTCCTGGAAGCTGCCTCAGGAAGGAGA | + |
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Preference number: 1 (lower is better) Translates to: GHRVTGTEDPLRTDL*TVWGWVLEAASGRR Trigger: TCTCCTTCCTGAGGCAGCTTCCAGGACCCACCCCCAGACTGTTCACAGATCAGTGCGGAGAGGGTCCTCTGTCCCTGTGACCCTGTGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| 3UTR CCA 90 bp | AGACCTCCTGCCCTCATCCTAAAGGGCTTCCTACACAGGTGGGGGTaGGGTGGGGTTGAGGCCACGAGACACAGTGGAGGGTCCTTGCAT | + |
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Preference number: 1 (lower is better) Translates to: RPPALILKGFLHRWG*GGVEATRHSGGSLH Trigger: ATGCAAGGACCCTCCACTGTGTCTCGTGGCCTCAACCCCACCCCACCCCCACCTGTGTAGGAAGCCCTTTAGGATGAGGGCAGGAGGTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| 3UTR CCA 90 bp | AGTACACAGGACCCTTCTGGATGGGCTGTTGTTGTTAATGCCACCTaGGGAGGTAGGGCAGGGGACACTGAGCTGCCCGGGTCACAGGGT | + |
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Preference number: 1 (lower is better) Translates to: STQDPSGWAVVVNAT*GGRAGDTELPGSQG Trigger: ACCCTGTGACCCGGGCAGCTCAGTGTCCCCTGCCCTACCTCCCCAGGTGGCATTAACAACAACAGCCCATCCAGAAGGGTCCTGTGTACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| 3UTR TCA 90 bp | GAAACCAGAGTGAGCTGGATTGGTCCTGACTTAGAACCTTCACCTTaGTTTCCTTGGTCATTGTTTGTGCCAAACTGGGCAGCTCAGAAG | + |
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Preference number: 1 (lower is better) Translates to: ETRVSWIGPDLEPSP*FPWSLFVPNWAAQK Trigger: CTTCTGAGCTGCCCAGTTTGGCACAAACAATGACCAAGGAAATCAAGGTGAAGGTTCTAAGTCAGGACCAATCCAGCTCACTCTGGTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| 3UTR TCA 90 bp | CTATGTGCATACGTGTCTGCATTCTCTACAGTGTGCTTAATGCTCTaGGGGAGGGAGATAGCTTATTGCAAGAACTGGTGTGCTGGTCAC | + |
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Preference number: 1 (lower is better) Translates to: LCAYVSAFSTVCLML*GREIAYCKNWCAGH Trigger: GTGACCAGCACACCAGTTCTTGCAATAAGCTATCTCCCTCCCTCAGAGCATTAAGCACACTGTAGAGAATGCAGACACGTATGCACATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| 3UTR-3UTR TCA 90 bp | GTCACAGGGTCACAGGGACAGAGGACCCTCTCCGCACTGATCTGTGAACAGTCTCGAAGCCCCGGTCCATaGCCAGTTCAGAGCCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: VTGSQGQRTLSALICEQSRSPGP*PVQSQG Trigger: GCCTTGGCTCTGAACTGGTCATGGACCGGGGCTTCG...AGACTGTTCACAGATCAGTGCGGAGAGGGTCCTCTGTCCCTGTGACCCTGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| 3UTR-3UTR TCA 90 bp | GTCACAGGGTCACAGGGACAGAGGACCCTCTCCGCACTGATCTGTGAACAGTCTTCTGGACCTGCCCCTTaGGGTAGGTGGAGACAGAGA | + |
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Preference number: 2 (lower is better) Translates to: VTGSQGQRTLSALICEQSSGPAP*GRWRQR Trigger: TCTCTGTCTCCACCTACCTCAAGGGGCAGGTCCAGA...AGACTGTTCACAGATCAGTGCGGAGAGGGTCCTCTGTCCCTGTGACCCTGTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| 3UTR-3UTR TCA 90 bp | ACGCTTTGCTACATGGGAGTCCACCCTCTCCGCAGAGGAGAGAGACAGAGCTTCGAGCTACAGTGGCAGTaGCAAAGGCTAGCCACCTGC | + |
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Preference number: 2 (lower is better) Translates to: TLCYMGVHPLRRGERQSFELQWQ*QRLATC Trigger: GCAGGTGGCTAGCCTTTGTCACTGCCACTGTAGCTC...GAAGCTCTGTCTCTCTCCTCTGCGGAGAGGGTGGACTCCCATGTAGCAAAGCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| 3UTR-3UTR GCA 90 bp | CTTGTTCTCAGTTTCACATCAAAGAACACCGAGCAGCAAGAAGGAGACCTCCTGCCCACCGCCCCTCTCTaGATGGTCATGGTGTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: LVLSFTSKNTEQQEGDLLPTAPL*MVMVSG Trigger: TCCAGACACCATGACCATGCAGAGAGGGGCGGTGGG...CAGGAGGTCTCCTTCTTGCTGCTCGGTGTTCTTTGATGTGAAACTGAGAACAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| 3UTR-3UTR CCA 90 bp | GATGGGCTGTTGTTGTTAATGCCACCTGGGGAGGTAGGGCAGGGGACACTGAGCGCGGGCAGAAAAGTCTaGATAACAGTCTATAGTTGG | + |
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Preference number: 2 (lower is better) Translates to: DGLLLLMPPGEVGQGTLSAGRKV*ITVYSW Trigger: CCAACTATAGACTGTTATCCAGACTTTTCTGCCCGC...GCTCAGTGTCCCCTGCCCTACCTCCCCAGGTGGCATTAACAACAACAGCCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| 3UTR CAA 90 bp | TTTGTGAGCTATCAAGCTAAGAAGCTACGGGACGAGACATACGCTTaGCTACATGGGAGTCCACCCTCTCCGCAGAGGAGAGAGACAGAG | + |
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Preference number: 2 (lower is better) Translates to: FVSYQAKKLRDETYA*LHGSPPSPQRRETE Trigger: CTCTGTCTCTCTCCTCTGCGGAGAGGGTGGACTCCCATGTAGCAAAGCGTATGTCTCGTCCCGTAGCTTCTTAGCTTGATAGCTCACAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| 3UTR-3UTR GCA 90 bp | CTTGTTCTCAGTTTCACATCAAAGAACACCGAGCAGCAAGAAGGAGACCTCCTGTTGCAAGAACTGGTGTaGTGGTCACTTCTGGATGAG | + |
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Preference number: 2 (lower is better) Translates to: LVLSFTSKNTEQQEGDLLLQELV*WSLLDE Trigger: CTCATCCAGAAGTGACCAGCACACCAGTTCTTGCAA...CAGGAGGTCTCCTTCTTGCTGCTCGGTGTTCTTTGATGTGAAACTGAGAACAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| 3UTR-3UTR CCA 90 bp | TGTACGACCTTTAACGTTGTGCTCTATAAGGTAAGTTTGGGTGGAAATCAGGGGCAGGACCCTTCTGGATaGGCTGTTGTTGTTAATGCC | + |
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Preference number: 2 (lower is better) Translates to: CTTFNVVLYKVSLGGNQGQDPSG*AVVVNA Trigger: GGCATTAACAACAACAGCCCATCCAGAAGGGTCCTG...CCCCTGATTTCCACCCAAACTTACCTTATAGAGCACAACGTTAAAGGTCGTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| 3UTR CAA 90 bp | ATTCTCTACAGTGTGCTTAATGCTCTGAGGGAGGGAGATAGCTTATaGCAAGAACTGGTGTGCTGGTCACTTCTGGATGAGAATGACAAG | + |
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Preference number: 2 (lower is better) Translates to: ILYSVLNALREGDSL*QELVCWSLLDENDK Trigger: CTTGTCATTCTCATCCAGAAGTGACCAGCACACCAGTTCTTGCAATAAGCTATCTCCCTCCCTCAGAGCATTAAGCACACTGTAGAGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| 3UTR-3UTR TCA 90 bp | TCTAAGAGGGAAACCAGAGTGAGCTGGATTGGTCCTGACTTAGAACCTTCACCTAGGCAATTGTGCTTGTaGTTTCTTTTGTTCCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: SKRETRVSWIGPDLEPSPRQLCL*FLLFLP Trigger: GGGAAGGAACAAAAGAAATCACAAGCACAATTGCCT...AGGTGAAGGTTCTAAGTCAGGACCAATCCAGCTCACTCTGGTTTCCCTCTTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| 3UTR-3UTR TCA 90 bp | TGTACGACCTTTAACGTTGTGCTCTATAAGGTAAGTTTGGGTGGAAATCAGGGGGTGTGCTTAATGCTCTaGGGGAGGGAGATAGCTTAT | + |
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Preference number: 2 (lower is better) Translates to: CTTFNVVLYKVSLGGNQGVCLML*GREIAY Trigger: ATAAGCTATCTCCCTCCCTCAGAGCATTAAGCACAC...CCCCTGATTTCCACCCAAACTTACCTTATAGAGCACAACGTTAAAGGTCGTACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| 3UTR CAA 90 bp | CACAGTAATTGTACGACCTTTAACGTTGTGCTCTATAAGGTAAGTTaGGGTGGAAATCAGGGGATTTCTTGCCAAACATCTCAGAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: HSNCTTFNVVLYKVS*GGNQGISCQTSQRC Trigger: GCACCTCTGAGATGTTTGGCAAGAAATCCCCTGATTTCCACCCAAACTTACCTTATAGAGCACAACGTTAAAGGTCGTACAATTACTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| 3UTR CCA 72 bp | GACCCTTCTGGATGGGCTGTTGTTGTTAATGCCACCTaGGGAGGTAGGGCAGGGGACACTGAGCTGCCCGGG | + |
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Preference number: 3 (lower is better) Translates to: DPSGWAVVVNAT*GGRAGDTELPG Trigger: CCCGGGCAGCTCAGTGTCCCCTGCCCTACCTCCCCAGGTGGCATTAACAACAACAGCCCATCCAGAAGGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| 3UTR TCA 72 bp | TCACAGGGTCACAGGGACAGAGGACCCTCTCCGCACTaGTCTGTGAACAGTCTGGGGGTGGGTCCTGGAAGC | + |
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Preference number: 3 (lower is better) Translates to: SQGHRDRGPSPH*SVNSLGVGPGS Trigger: GCTTCCAGGACCCACCCCCAGACTGTTCACAGATCAGTGCGGAGAGGGTCCTCTGTCCCTGTGACCCTGTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| 3UTR GCA 72 bp | GTGGGGTTGAGGCCACGAGACACAGTGGAGGGTCCTTaGATTCCACACCTGGGACTCTGTCGACAGGCATCT | + |
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Preference number: 3 (lower is better) Translates to: VGLRPRDTVEGP*IPHLGLCRQAS Trigger: AGATGCCTGTCGACAGAGTCCCAGGTGTGGAATGCAAGGACCCTCCACTGTGTCTCGTGGCCTCAACCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| 3UTR CCA 72 bp | CACGAGACACAGTGGAGGGTCCTTGCATTCCACACCTaGGACTCTGTCGACAGGCATCTGTGCACGCTGGTC | + |
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Preference number: 3 (lower is better) Translates to: HETQWRVLAFHT*DSVDRHLCTLV Trigger: GACCAGCGTGCACAGATGCCTGTCGACAGAGTCCCAGGTGTGGAATGCAAGGACCCTCCACTGTGTCTCGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| 3UTR GCA 72 bp | CATCAAAGAACACCGAGCAGCAAGAAGGAGACCTCCTaGCCTCATCCTAAAGGGCTTCCTACACAGGTGGGG | + |
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Preference number: 3 (lower is better) Translates to: HQRTPSSKKETS*PHPKGLPTQVG Trigger: CCCCACCTGTGTAGGAAGCCCTTTAGGATGAGGGCAGGAGGTCTCCTTCTTGCTGCTCGGTGTTCTTTGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| 3UTR TCA 72 bp | CCTCTCTGCATGGTCATGGTGTCTGGACCTGCCCCTTaGGGTAGGTGGAGACAGAGAGTATCTTCAGTCTTC | + |
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Preference number: 3 (lower is better) Translates to: PLCMVMVSGPAP*GRWRQRVSSVF Trigger: GAAGACTGAAGATACTCTCTGTCTCCACCTACCTCAAGGGGCAGGTCCAGACACCATGACCATGCAGAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
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| 3UTR GCA 72 bp | ATCAAGCTAAGAAGCTACGGGACGAGACATACGCTTTaGTACATGGGAGTCCACCCTCTCCGCAGAGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: IKLRSYGTRHTL*YMGVHPLRRGE Trigger: CTCTCCTCTGCGGAGAGGGTGGACTCCCATGTAGCAAAGCGTATGTCTCGTCCCGTAGCTTCTTAGCTTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| 3UTR CCA 72 bp | ACAGAGCTTCTGGAACTTTCCAGAAACTGTCTCCGCTaGCTTCACCAACACAGAACCCAAGGCCAGAAGGGA | + |
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Preference number: 3 (lower is better) Translates to: TELLELSRNCLR*LHQHRTQGQKG Trigger: TCCCTTCTGGCCTTGGGTTCTGTGTTGGTGAAGCCAGCGGAGACAGTTTCTGGAAAGTTCCAGAAGCTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| 3UTR-3UTR CAA 90 bp | TGTACGACCTTTAACGTTGTGCTCTATAAGGTAAGTTTGGGTGGAAATCAGGGGGACCACAGCTCCCACTaGGGGAAAGTCCTGGGATGG | + |
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Preference number: 3 (lower is better) Translates to: CTTFNVVLYKVSLGGNQGDHSSH*GKVLGW Trigger: CCATCCCAGGACTTTCCCCAAGTGGGAGCTGTGGTC...CCCCTGATTTCCACCCAAACTTACCTTATAGAGCACAACGTTAAAGGTCGTACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| 3UTR-3UTR CAA 90 bp | CTTGTTCTCAGTTTCACATCAAAGAACACCGAGCAGCAAGAAGGAGACCTCCTGGGAAGAGCTGGTAGATaGCCTACACAATATCACACG | + |
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Preference number: 3 (lower is better) Translates to: LVLSFTSKNTEQQEGDLLGRAGR*PTQYHT Trigger: CGTGTGATATTGTGTAGGCAATCTACCAGCTCTTCC...CAGGAGGTCTCCTTCTTGCTGCTCGGTGTTCTTTGATGTGAAACTGAGAACAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| 3UTR TCA 72 bp | GTGAGCTGGATTGGTCCTGACTTAGAACCTTCACCTTaGTTTCCTTGGTCATTGTTTGTGCCAAACTGGGCA | + |
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Preference number: 3 (lower is better) Translates to: VSWIGPDLEPSP*FPWSLFVPNWA Trigger: TGCCCAGTTTGGCACAAACAATGACCAAGGAAATCAAGGTGAAGGTTCTAAGTCAGGACCAATCCAGCTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| 3UTR GCA 72 bp | CTGAGGGAGGGAGATAGCTTATTGCAAGAACTGGTGTaGTGGTCACTTCTGGATGAGAATGACAAGAGATTC | + |
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Preference number: 3 (lower is better) Translates to: LREGDSLLQELV*WSLLDENDKRF Trigger: GAATCTCTTGTCATTCTCATCCAGAAGTGACCAGCACACCAGTTCTTGCAATAAGCTATCTCCCTCCCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| 3UTR TCA 72 bp | TACGTGTCTGCATTCTCTACAGTGTGCTTAATGCTCTaGGGGAGGGAGATAGCTTATTGCAAGAACTGGTGT | + |
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Preference number: 3 (lower is better) Translates to: YVSAFSTVCLML*GREIAYCKNWC Trigger: ACACCAGTTCTTGCAATAAGCTATCTCCCTCCCTCAGAGCATTAAGCACACTGTAGAGAATGCAGACACGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| 3UTR CCA 72 bp | AGGGAGGGAGATAGCTTATTGCAAGAACTGGTGTGCTaGTCACTTCTGGATGAGAATGACAAGAGATTCAAA | + |
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Preference number: 3 (lower is better) Translates to: REGDSLLQELVC*SLLDENDKRFK Trigger: TTTGAATCTCTTGTCATTCTCATCCAGAAGTGACCAGCACACCAGTTCTTGCAATAAGCTATCTCCCTCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| CDS-3UTR TCA 90 bp | GCCCACCCAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCGAGGCCCACACCCTTaGACATGGGCGCCAGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: AHPGSDCPPPPLSAWSWCRGPHP*TWAPAS Trigger: GGAAGCTGGCGCCCATGTTCAAGGGTGTGGGCCTCG...ACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTGGGTGGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| CDS-3UTR TCA 90 bp | AGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGGACCTGGCCTCCTTGCTGGCTaGGCTGCCAGCCTGCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: RVRLSPTAPLCMVMVSGPGLLAG*AASLRL Trigger: CAGCCGCAGGCTGGCAGCTCAGCCAGCAAGGAGGCC...AGGTCCAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
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| CDS-3UTR TCA 90 bp | CACCCAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGTGCCAGCCCCGGGCCTaGGGCTGCCACATCAGCTAT | + |
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Preference number: 4 (lower is better) Translates to: HPGSDCPPPPLSAWSWCLCQPRA*GCHISY Trigger: ATAGCTGATGTGGCAGCCTCAGGCCCGGGGCTGGCA...CAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTGGGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
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| CDS-3UTR GCA 90 bp | ACCCAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGGGCTGAGCTGCCAGCCTaGGGCTGCTCAGGGCCATTC | + |
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Preference number: 4 (lower is better) Translates to: TQGQTVPHRPSLHGHGVWAELPA*GCSGPF Trigger: GAATGGCCCTGAGCAGCCGCAGGCTGGCAGCTCAGC...CCAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTGGGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
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| CDS-3UTR GCA 90 bp | CCCAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGGACCTTGCTGGCTGAGCTaGCAGCCTGCGGCTGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: PRVRLSPTAPLCMVMVSGPCWLS*QPAAAQ Trigger: CTGAGCAGCCGCAGGCTGGCAGCTCAGCCAGCAAGG...TCCAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
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| CDS-3UTR CCA 90 bp | CAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGGACCCGCCCAGGCCCCCAATaGAGGTGTACTGGCCTAGGG | + |
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Preference number: 4 (lower is better) Translates to: QGQTVPHRPSLHGHGVWTRPGPQ*RCTGLG Trigger: CCCTAGGCCAGTACACCTCCATTGGGGGCCTGGGCG...GGTCCAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| CDS-3UTR TCA 90 bp | CAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGGACCAGGCAATGGCCAGTGTaGTGGCCAGAGGCCAGCGGA | + |
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Preference number: 4 (lower is better) Translates to: QGQTVPHRPSLHGHGVWTRQWPV*WPEASG Trigger: TCCGCTGGCCTCTGGCCATCACACTGGCCATTGCCT...GGTCCAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
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| CDS-3UTR TCA 90 bp | GATGGGCTGTTGTTGTTAATGCCACCTGGGGAGGTAGGGCAGGGGACACTGAGCGGCCTCCTTGCTGGCTaGGCTGCCAGCCTGCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: DGLLLLMPPGEVGQGTLSGLLAG*AASLRL Trigger: CAGCCGCAGGCTGGCAGCTCAGCCAGCAAGGAGGCC...GCTCAGTGTCCCCTGCCCTACCTCCCCAGGTGGCATTAACAACAACAGCCCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| CDS-3UTR GCA 90 bp | AGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGGACCTGCTGAGCTGCCAGCCTaGGGCTGCTCAGGGCCATTC | + |
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Preference number: 4 (lower is better) Translates to: RVRLSPTAPLCMVMVSGPAELPA*GCSGPF Trigger: GAATGGCCCTGAGCAGCCGCAGGCTGGCAGCTCAGC...AGGTCCAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
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| CDS-3UTR GCA 90 bp | AGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGGACCTCCTTGCTGGCTGAGCTaGCAGCCTGCGGCTGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: RVRLSPTAPLCMVMVSGPPCWLS*QPAAAQ Trigger: CTGAGCAGCCGCAGGCTGGCAGCTCAGCCAGCAAGG...AGGTCCAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
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| CDS-3UTR CCA 90 bp | ACCCAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGGAGAGGATCCCCTCCTTaGCCCCGGGAAGCGTCACTC | + |
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Preference number: 4 (lower is better) Translates to: TQGQTVPHRPSLHGHGVWRGSPP*PREASL Trigger: GAGTGACGCTTCCCGGGGCCAAGGAGGGGATCCTCT...CCAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTGGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
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| CDS-3UTR TCA 90 bp | CAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGGACCAGCCCACGCAGGACATaGGGAAGTCGAAGCGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: QGQTVPHRPSLHGHGVWTSPRRT*GSRSVP Trigger: AGGGACGCTTCGACTTCCTCATGTCCTGCGTGGGCT...GGTCCAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| CDS-3UTR TCA 90 bp | CTCAGGGCCCACCCAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCAGTAGGGGTACGTGGCTaGGAAGTAGACCACCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: LRAHPGSDCPPPPLSAWSVGVRG*EVDHLS Trigger: GGAAAGGTGGTCTACTTCTCAGCCACGTACCCCTAC...TGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTGGGTGGGCCCTGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
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| CDS-3UTR TCA 90 bp | CACCCAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGCCATGTACCCGGGGATaGGCACCATGGAGGACAGAG | + |
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Preference number: 4 (lower is better) Translates to: HPGSDCPPPPLSAWSWCLPCTRG*APWRTE Trigger: CTCTGTCCTCCATGGTGCTCATCCCCGGGTACATGG...CAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTGGGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
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| CDS-3UTR TCA 90 bp | CTCAGGGCCCACCCAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCACACTGGGCTGAATCATaGCCTGGAGACGCTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LRAHPGSDCPPPPLSAWSHWAES*PGDAAS Trigger: TGAAGCAGCGTCTCCAGGTCATGATTCAGCCCAGTG...TGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTGGGTGGGCCCTGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS-3UTR CCA 90 bp | CTCAGGGCCCACCCAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCACCAGCGGATCTGTCCTaGCTTGTCCAGTCCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LRAHPGSDCPPPPLSAWSPADLS*LVQSIC Trigger: ACAGATGGACTGGACAAGCCAGGACAGATCCGCTGG...TGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTGGGTGGGCCCTGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS-3UTR TCA 90 bp | GCCCACCCAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTTCATCTGCACAGCACTaGAGAGAAACACGCCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AHPGSDCPPPPLSAWSWCSSAQH*RETRPP Trigger: TGGCGGGCGTGTTTCTCTTCAGTGCTGTGCAGATGA...ACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTGGGTGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS-3UTR TCA 90 bp | AGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGGACCTCCATGTACCCGGGGATaGGCACCATGGAGGACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RVRLSPTAPLCMVMVSGPPCTRG*APWRTE Trigger: CTCTGTCCTCCATGGTGCTCATCCCCGGGTACATGG...AGGTCCAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS-3UTR GCA 90 bp | CCCAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGGAGGAACCTCCACACATTaGCCAGGCCGATGGCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: PRVRLSPTAPLCMVMVSGGTSTH*PGRWHS Trigger: GCTATGCCATCGGCCTGGGCAATGTGTGGAGGTTCC...TCCAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS-3UTR GCA 90 bp | CTCAGGGCCCACCCAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCAAGAACTGGCTGTCAATaGCCAGCATCAGCAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: LRAHPGSDCPPPPLSAWSRTGCQ*PASAAW Trigger: CCATGCTGCTGATGCTGGGCATTGACAGCCAGTTCT...TGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTGGGTGGGCCCTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS-3UTR GCA 90 bp | CCCAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGGAACAGCTTCCACCAGATaGAGGGCCTGGAGCCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: PRVRLSPTAPLCMVMVSGTASTR*RAWSQP Trigger: TGGTTGGCTCCAGGCCCTGCATCTGGTGGAAGCTGT...TCCAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS-3UTR GCA 90 bp | ACCCAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGGATGACCTGGAGACGCTaGTTCAGGGAGCCCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TQGQTVPHRPSLHGHGVWMTWRR*FREPFR Trigger: CCTGAAGGGCTCCCTGAAGCAGCGTCTCCAGGTCAT...CCAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTGGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS-3UTR GCA 90 bp | CACCCAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGAGATGTAGGCCTCCTTaGTGGCTGAGCTGCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HPGSDCPPPPLSAWSWCLRCRPP*WLSCQP Trigger: AGGCTGGCAGCTCAGCCAGCAAGGAGGCCTACATCT...CAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTGGGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGGACCCAGAGGGGAGAGATaGGTAGCTGTGTCACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PRVRLSPTAPLCMVMVSGPRGER*VAVSQP Trigger: AGGCTGTGACACAGCTACCCATCTCTCCCCTCTGGG...TCCAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGGAACCAGATGCAGGGCCTaGAGCCAACCATCTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PRVRLSPTAPLCMVMVSGTRCRA*SQPSPG Trigger: TCCAGGAGATGGTTGGCTCCAGGCCCTGCATCTGGT...TCCAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS-3UTR CCA 90 bp | ACCCAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGGCGCCCTGGCCCCACTTaGGGAAAACATAGCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TQGQTVPHRPSLHGHGVWRPGPT*GKHSFP Trigger: TGGGAAGCTATGTTTTCCCCAAGTGGGGCCAGGGCG...CCAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTGGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS-3UTR TCA 90 bp | GATGGGCTGTTGTTGTTAATGCCACCTGGGGAGGTAGGGCAGGGGACACTGAGCAGGCAATGGCCAGTGTaGTGGCCAGAGGCCAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: DGLLLLMPPGEVGQGTLSRQWPV*WPEASG Trigger: TCCGCTGGCCTCTGGCCATCACACTGGCCATTGCCT...GCTCAGTGTCCCCTGCCCTACCTCCCCAGGTGGCATTAACAACAACAGCCCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS-3UTR TCA 90 bp | ACCCAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGGGTAGGGGTACGTGGCTaGGAAGTAGACCACCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TQGQTVPHRPSLHGHGVWVGVRG*EVDHLS Trigger: GGAAAGGTGGTCTACTTCTCAGCCACGTACCCCTAC...CCAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTGGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS-3UTR TCA 90 bp | ACCCAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGGGACCTCTTGGTGACATaGGCCATGAAGCCCACGATG | + |
|
Preference number: 4 (lower is better) Translates to: TQGQTVPHRPSLHGHGVWDLLVT*AMKPTM Trigger: CATCGTGGGCTTCATGGCTCATGTCACCAAGAGGTC...CCAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTGGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS-3UTR GCA 90 bp | ACCCAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGGTCCCCGGCCTTCTTCTaGACCTTGACTACCAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TQGQTVPHRPSLHGHGVWSPAFF*TLTTRV Trigger: AACCCTGGTAGTCAAGGTGCAGAAGAAGGCCGGGGA...CCAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTGGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS-3UTR GCA 90 bp | GCCCACCCAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTTCATCTGGTGCATGTTaGGCTCCCAGAACTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: AHPGSDCPPPPLSAWSWCSSGAC*APRTPP Trigger: TGGTGGAGTTCTGGGAGCGCAACATGCACCAGATGA...ACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTGGGTGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS-3UTR GCA 90 bp | CTCAGGGCCCACCCAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCACAACACCCTTCCAGATaGAGAAATACACGAGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: LRAHPGSDCPPPPLSAWSQHPSR*RNTRAP Trigger: GGGTGCTCGTGTATTTCTGCATCTGGAAGGGTGTTG...TGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTGGGTGGGCCCTGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS-3UTR GCA 90 bp | AGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGGACCTAGATGTAGGCCTCCTTaGTGGCTGAGCTGCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RVRLSPTAPLCMVMVSGPRCRPP*WLSCQP Trigger: AGGCTGGCAGCTCAGCCAGCAAGGAGGCCTACATCT...AGGTCCAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS-3UTR CCA 90 bp | GCCCACCCAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCCAATGGAGGTGTACTaGCCTAGGGAGCACTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: AHPGSDCPPPPLSAWSWCPMEVY*PREHSK Trigger: TTTGGAGTGCTCCCTAGGCCAGTACACCTCCATTGG...ACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTGGGTGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGGACCCCAGCGGATCTGTCCTaGCTTGTCCAGTCCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QGQTVPHRPSLHGHGVWTPADLS*LVQSIC Trigger: ACAGATGGACTGGACAAGCCAGGACAGATCCGCTGG...GGTCCAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS-3UTR CCA 90 bp | AGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGGACCTACCAGATGCAGGGCCTaGAGCCAACCATCTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RVRLSPTAPLCMVMVSGPTRCRA*SQPSPG Trigger: TCCAGGAGATGGTTGGCTCCAGGCCCTGCATCTGGT...AGGTCCAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS-3UTR CCA 90 bp | GCCCACCCAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTGCTTCCCATGGTGAGTaGTGTCATCTGCACAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: AHPGSDCPPPPLSAWSWCASHGE*CHLHST Trigger: AGTGCTGTGCAGATGACACCACTCACCATGGGAAGC...ACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTGGGTGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| 3UTR CAA 72 bp | GGTGGGGTTGAGGCCACGAGACACAGTGGAGGGTCCTaGCATTCCACACCTGGGACTCTGTCGACAGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: GGVEATRHSGGS*HSTPGTLSTGI Trigger: GATGCCTGTCGACAGAGTCCCAGGTGTGGAATGCAAGGACCCTCCACTGTGTCTCGTGGCCTCAACCCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS-3UTR TCA 90 bp | CCCAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGGAATGGCAGGGTCGTGGTaGAGGAGTTGTACAGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PRVRLSPTAPLCMVMVSGMAGSW*RSCTGS Trigger: ACTACCTGTACAACTCCTTCACCACGACCCTGCCAT...TCCAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS-3UTR TCA 90 bp | AGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGGACCTGACCTCTTGGTGACATaGGCCATGAAGCCCACGATG | + |
|
Preference number: 4 (lower is better) Translates to: RVRLSPTAPLCMVMVSGPDLLVT*AMKPTM Trigger: CATCGTGGGCTTCATGGCTCATGTCACCAAGAGGTC...AGGTCCAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS-3UTR TCA 90 bp | CAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGGACCCATAGCTTCCCATGGTaGGTGGTGTCATCTGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: QGQTVPHRPSLHGHGVWTHSFPW*VVSSAQ Trigger: CTGTGCAGATGACACCACTCACCATGGGAAGCTATG...GGTCCAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS-3UTR GCA 90 bp | CCCAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGGAACCTCAGTAGAGATCTaGCCATCAGCCACCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PRVRLSPTAPLCMVMVSGTSVEI*PSATLL Trigger: CAGCAAGGTGGCTGATGGGCAGATCTCTACTGAGGT...TCCAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS-3UTR CCA 90 bp | ACCCAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGGAGTCCATCTGTCATCTaGTGCATGTTGCGCTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TQGQTVPHRPSLHGHGVWSPSVI*CMLRSQ Trigger: CTGGGAGCGCAACATGCACCAGATGACAGATGGACT...CCAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGGATCCACGGTACAGAACTaGCTGTCAATGCCCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: PRVRLSPTAPLCMVMVSGSTVQN*LSMPSI Trigger: GATGCTGGGCATTGACAGCCAGTTCTGTACCGTGGA...TCCAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS-3UTR TCA 90 bp | CAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGGACCTTCGGAAGTTGGGTGTaGTGTAGAAGAGGATCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QGQTVPHRPSLHGHGVWTFGSWV*CRRGSP Trigger: AGGGGATCCTCTTCTACATCACACCCAACTTCCGAA...GGTCCAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS-3UTR TCA 90 bp | AGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGGACCTCCACGATGGAGAAGATaGCGAATCCGGCAAACATGC | + |
|
Preference number: 4 (lower is better) Translates to: RVRLSPTAPLCMVMVSGPPRWRR*RIRQTC Trigger: GCATGTTTGCCGGATTCGTCATCTTCTCCATCGTGG...AGGTCCAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS-3UTR GCA 90 bp | CACCCAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGCAACACCCTTCCAGATaGAGAAATACACGAGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: HPGSDCPPPPLSAWSWCLQHPSR*RNTRAP Trigger: GGGTGCTCGTGTATTTCTGCATCTGGAAGGGTGTTG...CAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTGGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS-3UTR GCA 90 bp | GCCCACCCAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTGTGAGTGGTGTCATCTaGACAGCACTGAAGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: AHPGSDCPPPPLSAWSWCVSGVI*TALKRN Trigger: GTTTCTCTTCAGTGCTGTGCAGATGACACCACTCAC...ACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTGGGTGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS-3UTR TCA 90 bp | CCCAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGGATCATGTTGGTGGTATTaGCCAGGCTGTAGTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PRVRLSPTAPLCMVMVSGSCWWY*PGCSWR Trigger: TCTCCAACTACAGCCTGGTCAATACCACCAACATGA...TCCAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGGACCGGAACAGCAAGCTCATaGCGCTGGCAGAGTAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: QGQTVPHRPSLHGHGVWTGTASS*RWQSNN Trigger: ATTATTACTCTGCCAGCGGCATGAGCTTGCTGTTCC...GGTCCAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS-3UTR CCA 90 bp | GTCACAGGGTCACAGGGACAGAGGACCCTCTCCGCACTGATCTGTGAACAGTCTCGCCCTGGCCCCACTTaGGGAAAACATAGCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VTGSQGQRTLSALICEQSRPGPT*GKHSFP Trigger: TGGGAAGCTATGTTTTCCCCAAGTGGGGCCAGGGCG...AGACTGTTCACAGATCAGTGCGGAGAGGGTCCTCTGTCCCTGTGACCCTGTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS-3UTR TCA 90 bp | ACGCTTTGCTACATGGGAGTCCACCCTCTCCGCAGAGGAGAGAGACAGAGCTTCCACTGGGCTGAATCATaGCCTGGAGACGCTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TLCYMGVHPLRRGERQSFHWAES*PGDAAS Trigger: TGAAGCAGCGTCTCCAGGTCATGATTCAGCCCAGTG...GAAGCTCTGTCTCTCTCCTCTGCGGAGAGGGTGGACTCCCATGTAGCAAAGCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS-3UTR GCA 90 bp | CTTGGTCATTGTTTGTGCCAAACTGGGCAGCTCAGAAGGACCACAGCTCCCACTACAGCTTCCACCAGATaGAGGGCCTGGAGCCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: LGHCLCQTGQLRRTTAPTTASTR*RAWSQP Trigger: TGGTTGGCTCCAGGCCCTGCATCTGGTGGAAGCTGT...AGTGGGAGCTGTGGTCCTTCTGAGCTGCCCAGTTTGGCACAAACAATGACCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS-3UTR TCA 90 bp | ACGCTTTGCTACATGGGAGTCCACCCTCTCCGCAGAGGAGAGAGACAGAGCTTCTTCGGAAGTTGGGTGTaGTGTAGAAGAGGATCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TLCYMGVHPLRRGERQSFFGSWV*CRRGSP Trigger: AGGGGATCCTCTTCTACATCACACCCAACTTCCGAA...GAAGCTCTGTCTCTCTCCTCTGCGGAGAGGGTGGACTCCCATGTAGCAAAGCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS-3UTR GCA 90 bp | TGTCTGGACCTGCCCCTTGAGGTAGGTGGAGACAGAGAGTATCTTCAGTCTTCAATGACCTGGAGACGCTaGTTCAGGGAGCCCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLDLPLEVGGDREYLQSSMTWRR*FREPFR Trigger: CCTGAAGGGCTCCCTGAAGCAGCGTCTCCAGGTCAT...TGAAGACTGAAGATACTCTCTGTCTCCACCTACCTCAAGGGGCAGGTCCAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS-3UTR TCA 90 bp | CTTGGTCATTGTTTGTGCCAAACTGGGCAGCTCAGAAGGACCACAGCTCCCACTCCACGATGGAGAAGATaGCGAATCCGGCAAACATGC | + |
|
Preference number: 4 (lower is better) Translates to: LGHCLCQTGQLRRTTAPTPRWRR*RIRQTC Trigger: GCATGTTTGCCGGATTCGTCATCTTCTCCATCGTGG...AGTGGGAGCTGTGGTCCTTCTGAGCTGCCCAGTTTGGCACAAACAATGACCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS-3UTR TCA 90 bp | TGTACGACCTTTAACGTTGTGCTCTATAAGGTAAGTTTGGGTGGAAATCAGGGGTGCCAGCCCCGGGCCTaGGGCTGCCACATCAGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: CTTFNVVLYKVSLGGNQGCQPRA*GCHISY Trigger: ATAGCTGATGTGGCAGCCTCAGGCCCGGGGCTGGCA...CCCCTGATTTCCACCCAAACTTACCTTATAGAGCACAACGTTAAAGGTCGTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS-3UTR TCA 90 bp | TGTCTGGACCTGCCCCTTGAGGTAGGTGGAGACAGAGAGTATCTTCAGTCTTCATCATCTGCACAGCACTaGAGAGAAACACGCCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CLDLPLEVGGDREYLQSSSSAQH*RETRPP Trigger: TGGCGGGCGTGTTTCTCTTCAGTGCTGTGCAGATGA...TGAAGACTGAAGATACTCTCTGTCTCCACCTACCTCAAGGGGCAGGTCCAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS-3UTR GCA 90 bp | TGTCTGGACCTGCCCCTTGAGGTAGGTGGAGACAGAGAGTATCTTCAGTCTTCATCATCTGGTGCATGTTaGGCTCCCAGAACTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: CLDLPLEVGGDREYLQSSSSGAC*APRTPP Trigger: TGGTGGAGTTCTGGGAGCGCAACATGCACCAGATGA...TGAAGACTGAAGATACTCTCTGTCTCCACCTACCTCAAGGGGCAGGTCCAGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS-3UTR CCA 90 bp | CTTGTTCTCAGTTTCACATCAAAGAACACCGAGCAGCAAGAAGGAGACCTCCTGCCCAGAGGGGAGAGATaGGTAGCTGTGTCACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LVLSFTSKNTEQQEGDLLPRGER*VAVSQP Trigger: AGGCTGTGACACAGCTACCCATCTCTCCCCTCTGGG...CAGGAGGTCTCCTTCTTGCTGCTCGGTGTTCTTTGATGTGAAACTGAGAACAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS-3UTR CCA 90 bp | AGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGGACCTCATAAAACCAGGAAATaGAGACACACTCGAAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RVRLSPTAPLCMVMVSGPHKTRK*RHTRRK Trigger: TTTTCTTCGAGTGTGTCTCCATTTCCTGGTTTTATG...AGGTCCAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS-3UTR TCA 90 bp | TGTCTGGACCTGCCCCTTGAGGTAGGTGGAGACAGAGAGTATCTTCAGTCTTCAGAACACCCGCAAAGATaGGCGTCAGGAAATATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CLDLPLEVGGDREYLQSSEHPQR*ASGNMG Trigger: TCCCATATTTCCTGACGCTCATCTTTGCGGGTGTTC...TGAAGACTGAAGATACTCTCTGTCTCCACCTACCTCAAGGGGCAGGTCCAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS-3UTR GCA 90 bp | TCTAAGAGGGAAACCAGAGTGAGCTGGATTGGTCCTGACTTAGAACCTTCACCTAGAACTGGCTGTCAATaGCCAGCATCAGCAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SKRETRVSWIGPDLEPSPRTGCQ*PASAAW Trigger: CCATGCTGCTGATGCTGGGCATTGACAGCCAGTTCT...AGGTGAAGGTTCTAAGTCAGGACCAATCCAGCTCACTCTGGTTTCCCTCTTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS-3UTR CCA 90 bp | TCTAAGAGGGAAACCAGAGTGAGCTGGATTGGTCCTGACTTAGAACCTTCACCTAGTCCATCTGTCATCTaGTGCATGTTGCGCTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SKRETRVSWIGPDLEPSPSPSVI*CMLRSQ Trigger: CTGGGAGCGCAACATGCACCAGATGACAGATGGACT...AGGTGAAGGTTCTAAGTCAGGACCAATCCAGCTCACTCTGGTTTCCCTCTTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS-3UTR CCA 90 bp | CTTGTTCTCAGTTTCACATCAAAGAACACCGAGCAGCAAGAAGGAGACCTCCTGGCTTCCCATGGTGAGTaGTGTCATCTGCACAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: LVLSFTSKNTEQQEGDLLASHGE*CHLHST Trigger: AGTGCTGTGCAGATGACACCACTCACCATGGGAAGC...CAGGAGGTCTCCTTCTTGCTGCTCGGTGTTCTTTGATGTGAAACTGAGAACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS-3UTR TCA 90 bp | TGTACGACCTTTAACGTTGTGCTCTATAAGGTAAGTTTGGGTGGAAATCAGGGGCCTTCTTCTGCACCTTaGCTACCAGGGTTTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CTTFNVVLYKVSLGGNQGPSSAP*LPGFWA Trigger: AGCCCAAAACCCTGGTAGTCAAGGTGCAGAAGAAGG...CCCCTGATTTCCACCCAAACTTACCTTATAGAGCACAACGTTAAAGGTCGTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS-3UTR TCA 90 bp | TGTACGACCTTTAACGTTGTGCTCTATAAGGTAAGTTTGGGTGGAAATCAGGGGCATAGCTTCCCATGGTaGGTGGTGTCATCTGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: CTTFNVVLYKVSLGGNQGHSFPW*VVSSAQ Trigger: CTGTGCAGATGACACCACTCACCATGGGAAGCTATG...CCCCTGATTTCCACCCAAACTTACCTTATAGAGCACAACGTTAAAGGTCGTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS-3UTR GCA 90 bp | CTTGTTCTCAGTTTCACATCAAAGAACACCGAGCAGCAAGAAGGAGACCTCCTGGGAACAGCAAGCTCATaGCGCTGGCAGAGTAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: LVLSFTSKNTEQQEGDLLGTASS*RWQSNN Trigger: ATTATTACTCTGCCAGCGGCATGAGCTTGCTGTTCC...CAGGAGGTCTCCTTCTTGCTGCTCGGTGTTCTTTGATGTGAAACTGAGAACAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS-3UTR GCA 90 bp | CTTGTTCTCAGTTTCACATCAAAGAACACCGAGCAGCAAGAAGGAGACCTCCTGGTGAGTGGTGTCATCTaGACAGCACTGAAGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LVLSFTSKNTEQQEGDLLVSGVI*TALKRN Trigger: GTTTCTCTTCAGTGCTGTGCAGATGACACCACTCAC...CAGGAGGTCTCCTTCTTGCTGCTCGGTGTTCTTTGATGTGAAACTGAGAACAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS-3UTR CCA 90 bp | TGTACGACCTTTAACGTTGTGCTCTATAAGGTAAGTTTGGGTGGAAATCAGGGGGTCACACTGTTTCCATaGCAGGGTCGTGGTGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CTTFNVVLYKVSLGGNQGVTLFP*QGRGEG Trigger: TCCTTCACCACGACCCTGCCATGGAAACAGTGTGAC...CCCCTGATTTCCACCCAAACTTACCTTATAGAGCACAACGTTAAAGGTCGTACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS-3UTR CCA 90 bp | TGTACGACCTTTAACGTTGTGCTCTATAAGGTAAGTTTGGGTGGAAATCAGGGGTCCACGGTACAGAACTaGCTGTCAATGCCCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: CTTFNVVLYKVSLGGNQGSTVQN*LSMPSI Trigger: GATGCTGGGCATTGACAGCCAGTTCTGTACCGTGGA...CCCCTGATTTCCACCCAAACTTACCTTATAGAGCACAACGTTAAAGGTCGTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| 3UTR CAA 72 bp | TGTACGACCTTTAACGTTGTGCTCTATAAGGTAAGTTaGGGTGGAAATCAGGGGATTTCTTGCCAAACATCT | + |
|
Preference number: 4 (lower is better) Translates to: CTTFNVVLYKVS*GGNQGISCQTS Trigger: AGATGTTTGGCAAGAAATCCCCTGATTTCCACCCAAACTTACCTTATAGAGCACAACGTTAAAGGTCGTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS-3UTR CAA 90 bp | CTCAGGGCCCACCCAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCAGCGAGGCCCACACCCTaGAACATGGGCGCCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LRAHPGSDCPPPPLSAWSARPTP*NMGASF Trigger: GAAGCTGGCGCCCATGTTCAAGGGTGTGGGCCTCGC...TGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTGGGTGGGCCCTGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGGACCACCAGGGTTTTGGGCTaGTCGCTGGCCACAGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QGQTVPHRPSLHGHGVWTTRVLG*SLATGA Trigger: GGCCCCTGTGGCCAGCGACAAGCCCAAAACCCTGGT...GGTCCAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS-3UTR CAA 90 bp | CCCAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGGAAAGAGGATCCCCTCCTaGGCCCCGGGAAGCGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: PRVRLSPTAPLCMVMVSGKRIPS*APGSVT Trigger: AGTGACGCTTCCCGGGGCCAAGGAGGGGATCCTCTT...TCCAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS-3UTR CAA 90 bp | CACCCAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGAAGAGGATCCCCTCCTaGGCCCCGGGAAGCGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: HPGSDCPPPPLSAWSWCLKRIPS*APGSVT Trigger: AGTGACGCTTCCCGGGGCCAAGGAGGGGATCCTCTT...CAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTGGGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS GCA 90 bp | CGTCCCTTCCATGTGTCCCGGTCAGGGAGGTCCCCGGCCTTCTTCTaGACCTTGACTACCAGGGTTTTGGGCTTGTCGCTGGCCACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RPFHVSRSGRSPAFF*TLTTRVLGLSLATG Trigger: CCCTGTGGCCAGCGACAAGCCCAAAACCCTGGTAGTCAAGGTGCAGAAGAAGGCCGGGGACCTCCCTGACCGGGACACATGGAAGGGACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS-3UTR CAA 90 bp | GCCCACCCAGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTGCCTTCTTCTGCACCTaGACTACCAGGGTTTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: AHPGSDCPPPPLSAWSWCAFFCT*TTRVLG Trigger: GCCCAAAACCCTGGTAGTCAAGGTGCAGAAGAAGGC...ACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCTGGGTGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS TCA 90 bp | CTGTGTCACAGCCTCAGGGTACGCCAAGAATGCCAGCCCCGGGCCTaGGGCTGCCACATCAGCTATGGACCTCTTGGTGACATGAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LCHSLRVRQECQPRA*GCHISYGPLGDMSH Trigger: ATGGCTCATGTCACCAAGAGGTCCATAGCTGATGTGGCAGCCTCAGGCCCGGGGCTGGCATTCTTGGCGTACCCTGAGGCTGTGACACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS CCA 90 bp | ATGGGCGCCAGCTTCCATACGCCCAGGCCCCCAATGGAGGTGTACTaGCCTAGGGAGCACTCCAAAAGGAAGAGAGGAACACCCGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: MGASFHTPRPPMEVY*PREHSKRKRGTPAK Trigger: CTTTGCGGGTGTTCCTCTCTTCCTTTTGGAGTGCTCCCTAGGCCAGTACACCTCCATTGGGGGCCTGGGCGTATGGAAGCTGGCGCCCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| CDS TCA 90 bp | TGCGCTCCCAGAACTCCACCACGGCGCTGGTCATGTTGGTGGTATTaGCCAGGCTGTAGTTGGAGAAGCAGCGGTCAGTGTTCCACGGGT | + |
|
Preference number: 5 (lower is better) Translates to: CAPRTPPRRWSCWWY*PGCSWRSSGQCSTG Trigger: ACCCGTGGAACACTGACCGCTGCTTCTCCAACTACAGCCTGGTCAATACCACCAACATGACCAGCGCCGTGGTGGAGTTCTGGGAGCGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS TCA 90 bp | GGCTGCTCAGGGCCATTCTCAGGGCGCACAATATCTTCACTGGGCTaGATCATGACCTGGAGACGCTGCTTCAGGGAGCCCTTCAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GCSGPFSGRTISSLG*IMTWRRCFREPFRV Trigger: CACCCTGAAGGGCTCCCTGAAGCAGCGTCTCCAGGTCATGATTCAGCCCAGTGAAGATATTGTGCGCCCTGAGAATGGCCCTGAGCAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
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| CDS-3UTR CAA 90 bp | AGGGTCAGACTGTCCCCCACCGCCCCTCTCTGCATGGTCATGGTGTCTGGACCTTCAGTGTTCCACGGGTaGTCACACTGTTTCCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: RVRLSPTAPLCMVMVSGPSVFHG*SHCFHG Trigger: GCCATGGAAACAGTGTGACAACCCGTGGAACACTGA...AGGTCCAGACACCATGACCATGCAGAGAGGGGCGGTGGGGGACAGTCTGACCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| CDS TCA 90 bp | CGTCAAGCCACACCTCAGAATCAGACAGCTTTCGGAAGTTGGGTGTaGTGTAGAAGAGGATCCCCTCCTTGGCCCCGGGAAGCGTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: RQATPQNQTAFGSWV*CRRGSPPWPREASL Trigger: GAGTGACGCTTCCCGGGGCCAAGGAGGGGATCCTCTTCTACATCACACCCAACTTCCGAAAGCTGTCTGATTCTGAGGTGTGGCTTGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
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| CDS GCA 90 bp | GGATCTGTCCTGGCTTGTCCAGTCCATCTGTCATCTGGTGCATGTTaGGCTCCCAGAACTCCACCACGGCGCTGGTCATGTTGGTGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: GSVLACPVHLSSGAC*APRTPPRRWSCWWY Trigger: ATACCACCAACATGACCAGCGCCGTGGTGGAGTTCTGGGAGCGCAACATGCACCAGATGACAGATGGACTGGACAAGCCAGGACAGATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| CDS-3UTR CAA 90 bp | TGTCTGGACCTGCCCCTTGAGGTAGGTGGAGACAGAGAGTATCTTCAGTCTTCAACGGCGCTGGTCATGTaGGTGGTATTGACCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CLDLPLEVGGDREYLQSSTALVM*VVLTRL Trigger: CAGCCTGGTCAATACCACCAACATGACCAGCGCCGT...TGAAGACTGAAGATACTCTCTGTCTCCACCTACCTCAAGGGGCAGGTCCAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| CDS TCA 72 bp | AGAAGGACAGCACAGCTGCCGCGAGGCCCACACCCTTaGACATGGGCGCCAGCTTCCATACGCCCAGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: RRTAQLPRGPHP*TWAPASIRPGP Trigger: GGGGCCTGGGCGTATGGAAGCTGGCGCCCATGTTCAAGGGTGTGGGCCTCGCGGCAGCTGTGCTGTCCTTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS TCA 72 bp | CCCGGTCAGGGAGGTCCCCGGCCTTCTTCTGCACCTTaGCTACCAGGGTTTTGGGCTTGTCGCTGGCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: PGQGGPRPSSAP*LPGFWACRWPQ Trigger: CTGTGGCCAGCGACAAGCCCAAAACCCTGGTAGTCAAGGTGCAGAAGAAGGCCGGGGACCTCCCTGACCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS CAA 90 bp | TCAGGGAGGTCCCCGGCCTTCTTCTGCACCTTGACTACCAGGGTTTaGGGCTTGTCGCTGGCCACAGGGGCCTCGCTGACCTCAGTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SGRSPAFFCTLTTRV*GLSLATGASLTSVE Trigger: CTCTACTGAGGTCAGCGAGGCCCCTGTGGCCAGCGACAAGCCCAAAACCCTGGTAGTCAAGGTGCAGAAGAAGGCCGGGGACCTCCCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS CAA 72 bp | TCCCGGTCAGGGAGGTCCCCGGCCTTCTTCTGCACCTaGACTACCAGGGTTTTGGGCTTGTCGCTGGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: SRSGRSPAFFCT*TTRVLGLSLAT Trigger: TGTGGCCAGCGACAAGCCCAAAACCCTGGTAGTCAAGGTGCAGAAGAAGGCCGGGGACCTCCCTGACCGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS GCA 72 bp | CATGTGTCCCGGTCAGGGAGGTCCCCGGCCTTCTTCTaGACCTTGACTACCAGGGTTTTGGGCTTGTCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: HVSRSGRSPAFF*TLTTRVLGLSL Trigger: CAGCGACAAGCCCAAAACCCTGGTAGTCAAGGTGCAGAAGAAGGCCGGGGACCTCCCTGACCGGGACACATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| CDS CCA 72 bp | ACATGGGCGCCAGCTTCCATACGCCCAGGCCCCCAATaGAGGTGTACTGGCCTAGGGAGCACTCCAAAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: TWAPASIRPGPQ*RCTGLGSTPKG Trigger: TCCTTTTGGAGTGCTCCCTAGGCCAGTACACCTCCATTGGGGGCCTGGGCGTATGGAAGCTGGCGCCCATGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS GCA 72 bp | GATGTAGTAGATGTTCAGCCAGAAGGACAGCACAGCTaGCGCGAGGCCCACACCCTTGAACATGGGCGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: DVVDVQPEGQHS*REAHTLEHGRQ Trigger: CTGGCGCCCATGTTCAAGGGTGTGGGCCTCGCGGCAGCTGTGCTGTCCTTCTGGCTGAACATCTACTACATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS CCA 72 bp | CGGATCTGTCCTGGCTTGTCCAGTCCATCTGTCATCTaGTGCATGTTGCGCTCCCAGAACTCCACCACGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RICPGLSSPSVI*CMLRSQNSTTA Trigger: CGCCGTGGTGGAGTTCTGGGAGCGCAACATGCACCAGATGACAGATGGACTGGACAAGCCAGGACAGATCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS CAA 72 bp | GCCTTCTTCTGCACCTTGACTACCAGGGTTTTGGGCTaGTCGCTGGCCACAGGGGCCTCGCTGACCTCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: AFFCTLTTRVLG*SLATGASLTSV Trigger: TACTGAGGTCAGCGAGGCCCCTGTGGCCAGCGACAAGCCCAAAACCCTGGTAGTCAAGGTGCAGAAGAAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS CAA 72 bp | CCTGGCTTGTCCAGTCCATCTGTCATCTGGTGCATGTaGCGCTCCCAGAACTCCACCACGGCGCTGGTCATG | + |
|
Preference number: 6 (lower is better) Translates to: PGLSSPSVIWCM*RSQNSTTALVM Trigger: CATGACCAGCGCCGTGGTGGAGTTCTGGGAGCGCAACATGCACCAGATGACAGATGGACTGGACAAGCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS CAA 90 bp | GCAATGGCCAGTGTGATGGCCAGAGGCCAGCGGATCTGTCCTGGCTaGTCCAGTCCATCTGTCATCTGGTGCATGTTGCGCTCCCAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: AMASVMARGQRICPG*SSPSVIWCMLRSQN Trigger: GTTCTGGGAGCGCAACATGCACCAGATGACAGATGGACTGGACAAGCCAGGACAGATCCGCTGGCCTCTGGCCATCACACTGGCCATTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS CAA 90 bp | CGGATCTGTCCTGGCTTGTCCAGTCCATCTGTCATCTGGTGCATGTaGCGCTCCCAGAACTCCACCACGGCGCTGGTCATGTTGGTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: RICPGLSSPSVIWCM*RSQNSTTALVMLVV Trigger: TACCACCAACATGACCAGCGCCGTGGTGGAGTTCTGGGAGCGCAACATGCACCAGATGACAGATGGACTGGACAAGCCAGGACAGATCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS TCA 72 bp | TGCAGAAATACACGAGCACCCAGGCAATGGCCAGTGTaGTGGCCAGAGGCCAGCGGATCTGTCCTGGCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: CRNTRAPRQWPV*WPEASGSVLAC Trigger: ACAAGCCAGGACAGATCCGCTGGCCTCTGGCCATCACACTGGCCATTGCCTGGGTGCTCGTGTATTTCTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS GCA 72 bp | ATCTGTCCTGGCTTGTCCAGTCCATCTGTCATCTGGTaGATGTTGCGCTCCCAGAACTCCACCACGGCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ICPGLSSPSVIW*MLRSQNSTTAL Trigger: CAGCGCCGTGGTGGAGTTCTGGGAGCGCAACATGCACCAGATGACAGATGGACTGGACAAGCCAGGACAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS CAA 72 bp | AGTGTGATGGCCAGAGGCCAGCGGATCTGTCCTGGCTaGTCCAGTCCATCTGTCATCTGGTGCATGTTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SVMARGQRICPG*SSPSVIWCMLR Trigger: GCGCAACATGCACCAGATGACAGATGGACTGGACAAGCCAGGACAGATCCGCTGGCCTCTGGCCATCACACT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS CAA 72 bp | ACGATGCACACGGCAGCAATGAAGAGTTCACGGCGATaGCGGAGAAGTCTGGGGTACTCGTCCACCAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: TMHTAAMKSSRR*RRSLGYSSTRA Trigger: TGCCCTGGTGGACGAGTACCCCAGACTTCTCCGCAATCGCCGTGAACTCTTCATTGCTGCCGTGTGCATCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS TCA 72 bp | GGCCAATCAGGTAGGACACGATGCACACGGCAGCAATaGAGAGTTCACGGCGATTGCGGAGAAGTCTGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GQSGRTRCTRQQ*RVHGDCGEVWG Trigger: ACCCCAGACTTCTCCGCAATCGCCGTGAACTCTTCATTGCTGCCGTGTGCATCGTGTCCTACCTGATTGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS TCA 72 bp | TCTCAGGGCGCACAATATCTTCACTGGGCTGAATCATaGCCTGGAGACGCTGCTTCAGGGAGCCCTTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SQGAQYLHWAES*PGDAASGSPSG Trigger: CCCTGAAGGGCTCCCTGAAGCAGCGTCTCCAGGTCATGATTCAGCCCAGTGAAGATATTGTGCGCCCTGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
||
| CDS CCA 72 bp | AGCTTCCATACGCCCAGGCCCCCAATGGAGGTGTACTaGCCTAGGGAGCACTCCAAAAGGAAGAGAGGAACA | + |
|
Preference number: 6 (lower is better) Translates to: SFHTPRPPMEVY*PREHSKRKRGT Trigger: TGTTCCTCTCTTCCTTTTGGAGTGCTCCCTAGGCCAGTACACCTCCATTGGGGGCCTGGGCGTATGGAAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
||
| CDS TCA 72 bp | AGAACTCCACCACGGCGCTGGTCATGTTGGTGGTATTaGCCAGGCTGTAGTTGGAGAAGCAGCGGTCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: RTPPRRWSCWWY*PGCSWRSSGQC Trigger: ACACTGACCGCTGCTTCTCCAACTACAGCCTGGTCAATACCACCAACATGACCAGCGCCGTGGTGGAGTTCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032454.8 |
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| CDS TCA 72 bp | ACACCTCAGAATCAGACAGCTTTCGGAAGTTGGGTGTaGTGTAGAAGAGGATCCCCTCCTTGGCCCCGGGAA | + |
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Preference number: 6 (lower is better) Translates to: TPQNQTAFGSWV*CRRGSPPWPRE Trigger: TTCCCGGGGCCAAGGAGGGGATCCTCTTCTACATCACACCCAACTTCCGAAAGCTGTCTGATTCTGAGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
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| CDS GCA 72 bp | AGACCACCTTTCCAGTCCAACCAACACCCTTCCAGATaGAGAAATACACGAGCACCCAGGCAATGGCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: RPPFQSNQHPSR*RNTRAPRQWPV Trigger: CACTGGCCATTGCCTGGGTGCTCGTGTATTTCTGCATCTGGAAGGGTGTTGGTTGGACTGGAAAGGTGGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
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| CDS TCA 72 bp | GAACAGGATGATAAGCATGATGTAGGGGTACGTGGCTaGGAAGTAGACCACCTTTCCAGTCCAACCAACACC | + |
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Preference number: 6 (lower is better) Translates to: EQDDKHDVGVRG*EVDHLSSPTNT Trigger: GGTGTTGGTTGGACTGGAAAGGTGGTCTACTTCTCAGCCACGTACCCCTACATCATGCTTATCATCCTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032454.8 ENSMUST00000204074.2 |
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