Pregenerated sensors for SLC66A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028744Ensembl transcript IDs: ENSMUST00000053862.12, ENSMUST00000105801.9, ENSMUST00000139840.9, ENSMUST00000141007.2, ENSMUST00000172747.8
Found 168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCCTGCTCCTGTCGCCTTGCTCTCCCACCACCGAGTGCCCTCCTTaGTGCCCTGACTCTGCCATCAGGGACCCTGGAATAGGGCGCTCT | + |
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Preference number: 1 (lower is better) Translates to: ALLLSPCSPTTECPP*CPDSAIRDPGIGRS Trigger: AGAGCGCCCTATTCCAGGGTCCCTGATGGCAGAGTCAGGGCATCAAGGAGGGCACTCGGTGGTGGGAGAGCAAGGCGACAGGAGCAGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
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| 3UTR GCA 90 bp | CCCTTGGGGCCTTTGCACAGGCTGTGCTGGGACTCTGTTCCCTTGTaGCTGAATAACTTCTCCCCCAGTCCCGGTGCGATGACCTGCTGG | + |
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Preference number: 1 (lower is better) Translates to: PLGPLHRLCWDSVPL*LNNFSPSPGAMTCW Trigger: CCAGCAGGTCATCGCACCGGGACTGGGGGAGAAGTTATTCAGGCACAAGGGAACAGAGTCCCAGCACAGCCTGTGCAAAGGCCCCAAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
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| 3UTR TCA 90 bp | CCGTGTAGGTCTGCAGGGGTAGCTGGTCTGCCAGAAAGGAGCCAATaGGGTTGCAGGAATCTCCACCGATCCAGCCCAGCAGGAACCACA | + |
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Preference number: 1 (lower is better) Translates to: PCRSAGVAGLPERSQ*GCRNLHRSSPAGTT Trigger: TGTGGTTCCTGCTGGGCTGGATCGGTGGAGATTCCTGCAACCTCATTGGCTCCTTTCTGGCAGACCAGCTACCCCTGCAGACCTACACGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141007.2 |
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| 3UTR CCA 90 bp | TCCAGCGGCGGCAGTATCTCTGCCCACACCTCATCCTTCCTGGTTTaGCAGCTGAGGTTCCCATCATCCAGGACGATGATCAGCTGGGGA | + |
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Preference number: 1 (lower is better) Translates to: SSGGSISAHTSSFLV*QLRFPSSRTMISWG Trigger: TCCCCAGCTGATCATCGTCCTGGATGATGGGAACCTCAGCTGCCAAACCAGGAAGGATGAGGTGTGGGCAGAGATACTGCCGCCGCTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
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| 3UTR TCA 90 bp | CAGACACTGATGCCAGCAGGGACAGTGACTGAAACCCTGAGGGTCTaGCTGGCAGTTCACCCTTGTCATCAGGGAGGAAACGGAGAAGAG | + |
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Preference number: 1 (lower is better) Translates to: QTLMPAGTVTETLRV*LAVHPCHQGGNGEE Trigger: CTCTTCTCCGTTTCCTCCCTGATGACAAGGGTGAACTGCCAGTCAGACCCTCAGGGTTTCAGTCACTGTCCCTGCTGGCATCAGTGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
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| 3UTR GCA 90 bp | AGCCCACACAAGCTTGTCTCCATGACTCAGCTCTCGTTTCCACAGTaGACACACTCTTCTGTCCCTTGGGGCCTTTGCACAGGCTGTGCT | + |
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Preference number: 1 (lower is better) Translates to: SPHKLVSMTQLSFPQ*THSSVPWGLCTGCA Trigger: AGCACAGCCTGTGCAAAGGCCCCAAGGGACAGAAGAGTGTGTGCACTGTGGAAACGAGAGCTGAGTCATGGAGACAAGCTTGTGTGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
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| 3UTR CCA 90 bp | CTGAGGCAGCAGCAGTCTCATGGCTTCTGTACACCAGGAACTGGATaGAGATCTGAGGACACTGTTAAGGTACTGCAGCCACACTGGGCC | + |
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Preference number: 1 (lower is better) Translates to: LRQQQSHGFCTPGTG*RSEDTVKVLQPHWA Trigger: GGCCCAGTGTGGCTGCAGTACCTTAACAGTGTCCTCAGATCTCCATCCAGTTCCTGGTGTACAGAAGCCATGAGACTGCTGCTGCCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
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| 3UTR CCA 90 bp | TCTGTAATCAAGATACGCCAAGATAGATTGCAGAGCCTGGGATGGTaGTGTGAGCCTGGGATTCCAGCACCTGGGAGATGGAGGCGGGAT | + |
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Preference number: 1 (lower is better) Translates to: SVIKIRQDRLQSLGW*CEPGIPAPGRWRRD Trigger: ATCCCGCCTCCATCTCCCAGGTGCTGGAATCCCAGGCTCACACCACCATCCCAGGCTCTGCAATCTATCTTGGCGTATCTTGATTACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
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| 3UTR CCA 90 bp | TTCTCTGTAATCAAGATACGCCAAGATAGATTGCAGAGCCTGGGATaGTGGTGTGAGCCTGGGATTCCAGCACCTGGGAGATGGAGGCGG | + |
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Preference number: 1 (lower is better) Translates to: FSVIKIRQDRLQSLG*WCEPGIPAPGRWRR Trigger: CCGCCTCCATCTCCCAGGTGCTGGAATCCCAGGCTCACACCACCATCCCAGGCTCTGCAATCTATCTTGGCGTATCTTGATTACAGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
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| 3UTR TCA 90 bp | CTGGCAGTTCACCCTTGTCATCAGGGAGGAAACGGAGAAGAGGAGTaGAGCCCACACAAGCTTGTCTCCATGACTCAGCTCTCGTTTCCA | + |
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Preference number: 1 (lower is better) Translates to: LAVHPCHQGGNGEEE*SPHKLVSMTQLSFP Trigger: TGGAAACGAGAGCTGAGTCATGGAGACAAGCTTGTGTGGGCTTCACTCCTCTTCTCCGTTTCCTCCCTGATGACAAGGGTGAACTGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
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| 3UTR TCA 90 bp | GAGGAAACGGAGAAGAGGAGTGAAGCCCACACAAGCTTGTCTCCATaGCTCAGCTCTCGTTTCCACAGTGCACACACTCTTCTGTCCCTT | + |
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Preference number: 1 (lower is better) Translates to: EETEKRSEAHTSLSP*LSSRFHSAHTLLSL Trigger: AAGGGACAGAAGAGTGTGTGCACTGTGGAAACGAGAGCTGAGTCATGGAGACAAGCTTGTGTGGGCTTCACTCCTCTTCTCCGTTTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
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| 3UTR GCA 90 bp | TGGAAAATGGGCTGGACAGATGTGCTGTGGGCCAAGTATTATCCCTaGAGATGTTTCCCCTCCAGCAAATGTTGTCTTTCCGCAGCAGCT | + |
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Preference number: 1 (lower is better) Translates to: WKMGWTDVLWAKYYP*RCFPSSKCCLSAAA Trigger: AGCTGCTGCGGAAAGACAACATTTGCTGGAGGGGAAACATCTGCAGGGATAATACTTGGCCCACAGCACATCTGTCCAGCCCATTTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
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| 3UTR CCA 90 bp | ATGGGCCCTCTAGACTTTAAGCTTTTCTCTCTCACCACGTCCCACTaGGACTCTCCAAATGTTGACACAAAGACCGTGTTTACTTCTTGC | + |
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Preference number: 1 (lower is better) Translates to: MGPLDFKLFSLTTSH*DSPNVDTKTVFTSC Trigger: GCAAGAAGTAAACACGGTCTTTGTGTCAACATTTGGAGAGTCCCAGTGGGACGTGGTGAGAGAGAAAAGCTTAAAGTCTAGAGGGCCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
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| 3UTR CCA 90 bp | AGGCTTCAAAGTCAGCCTCTGCCTCTTTTGAGAAACTTTCCAATTTaGAAAATGGGCTGGACAGATGTGCTGTGGGCCAAGTATTATCCC | + |
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Preference number: 1 (lower is better) Translates to: RLQSQPLPLLRNFPI*KMGWTDVLWAKYYP Trigger: GGGATAATACTTGGCCCACAGCACATCTGTCCAGCCCATTTTCCAAATTGGAAAGTTTCTCAAAAGAGGCAGAGGCTGACTTTGAAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
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| 3UTR CCA 90 bp | TTGAGAAACTTTCCAATTTGGAAAATGGGCTGGACAGATGTGCTGTaGGCCAAGTATTATCCCTGCAGATGTTTCCCCTCCAGCAAATGT | + |
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Preference number: 1 (lower is better) Translates to: LRNFPIWKMGWTDVL*AKYYPCRCFPSSKC Trigger: ACATTTGCTGGAGGGGAAACATCTGCAGGGATAATACTTGGCCCACAGCACATCTGTCCAGCCCATTTTCCAAATTGGAAAGTTTCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
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| 3UTR-3UTR GCA 90 bp | CTAGGCAGCCAGGCCCAGAGTTCCAGGCAGCCCCCTAGGCCCAGTCCAGCGGCGAGATGTATGCCCCTGTaGAGCACAAGCCAACTCCAG | + |
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Preference number: 2 (lower is better) Translates to: LGSQAQSSRQPPRPSPAARCMPL*STSQLQ Trigger: CTGGAGTTGGCTTGTGCTGCACAGGGGCATACATCT...CGCCGCTGGACTGGGCCTAGGGGGCTGCCTGGAACTCTGGGCCTGGCTGCCTAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000172747.8 |
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| 3UTR-3UTR GCA 90 bp | CTAGGCAGCCAGGCCCAGAGTTCCAGGCAGCCCCCTAGGCCCAGTCCAGCGGCGCTGTCACAGGGTCTATaGAGGCTGGCACTTAATGTC | + |
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Preference number: 2 (lower is better) Translates to: LGSQAQSSRQPPRPSPAALSQGL*RLALNV Trigger: GACATTAAGTGCCAGCCTGCATAGACCCTGTGACAG...CGCCGCTGGACTGGGCCTAGGGGGCTGCCTGGAACTCTGGGCCTGGCTGCCTAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
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| 3UTR-3UTR CCA 90 bp | CTAGGCAGCCAGGCCCAGAGTTCCAGGCAGCCCCCTAGGCCCAGTCCAGCGGCGTCATCCTTCCTGGTTTaGCAGCTGAGGTTCCCATCA | + |
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Preference number: 2 (lower is better) Translates to: LGSQAQSSRQPPRPSPAASSFLV*QLRFPS Trigger: TGATGGGAACCTCAGCTGCCAAACCAGGAAGGATGA...CGCCGCTGGACTGGGCCTAGGGGGCTGCCTGGAACTCTGGGCCTGGCTGCCTAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000172747.8 |
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| 3UTR-3UTR TCA 90 bp | CTAGGCAGCCAGGCCCAGAGTTCCAGGCAGCCCCCTAGGCCCAGTCCAGCGGCGAACTCCAGATCTGTCTaGAGGTCAGGAGGAGTTCTA | + |
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Preference number: 2 (lower is better) Translates to: LGSQAQSSRQPPRPSPAANSRSV*RSGGVL Trigger: TAGAACTCCTCCTGACCTTCAGACAGATCTGGAGTT...CGCCGCTGGACTGGGCCTAGGGGGCTGCCTGGAACTCTGGGCCTGGCTGCCTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000172747.8 |
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| 3UTR CAA 90 bp | TGTCCCTTGGGGCCTTTGCACAGGCTGTGCTGGGACTCTGTTCCCTaGTGCCTGAATAACTTCTCCCCCAGTCCCGGTGCGATGACCTGC | + |
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Preference number: 2 (lower is better) Translates to: CPLGPLHRLCWDSVP*CLNNFSPSPGAMTC Trigger: GCAGGTCATCGCACCGGGACTGGGGGAGAAGTTATTCAGGCACAAGGGAACAGAGTCCCAGCACAGCCTGTGCAAAGGCCCCAAGGGACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
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| 3UTR-3UTR TCA 90 bp | CGGAGAAGAGGAGTGAAGCCCACACAAGCTTGTCTCCATGACTCAGCTCTCGTTCCAGTCCCGGTGCGATaGCCTGCTGGGGCCTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: RRRGVKPTQACLHDSALVPVPVR*PAGASV Trigger: GACAGAGGCCCCAGCAGGTCATCGCACCGGGACTGG...AACGAGAGCTGAGTCATGGAGACAAGCTTGTGTGGGCTTCACTCCTCTTCTCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
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| 3UTR-3UTR GCA 90 bp | ATGGGAGGTGACCATACCGTCTTCTGGGGTCTCAGCTATGGGTGCCCTAGAGGCGTCCCTTGGGGCCTTTaGACAGGCTGTGCTGGGACT | + |
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Preference number: 2 (lower is better) Translates to: MGGDHTVFWGLSYGCPRGVPWGL*TGCAGT Trigger: AGTCCCAGCACAGCCTGTGCAAAGGCCCCAAGGGAC...GCCTCTAGGGCACCCATAGCTGAGACCCCAGAAGACGGTATGGTCACCTCCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
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| 3UTR-3UTR TCA 90 bp | GGTCTCAGCTATGGGTGCCCTAGAGGCTCCTCGGGCAGCTGTCATACACCTGAGTCCTGGTTTGGCAGCTaGGGTTCCCATCATCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: GLSYGCPRGSSGSCHTPESWFGS*GSHHPG Trigger: TCCTGGATGATGGGAACCTCAGCTGCCAAACCAGGA...CTCAGGTGTATGACAGCTGCCCGAGGAGCCTCTAGGGCACCCATAGCTGAGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000172747.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCTAGGCCCAGTCCAGCGGCGGCAGTATCTCTGCCCACACCTCATCCTTCCTTCATCCTTCCTGGTTTaGCAGCTGAGGTTCCCATCA | + |
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Preference number: 2 (lower is better) Translates to: PLGPVQRRQYLCPHLILPSSFLV*QLRFPS Trigger: TGATGGGAACCTCAGCTGCCAAACCAGGAAGGATGA...AGGAAGGATGAGGTGTGGGCAGAGATACTGCCGCCGCTGGACTGGGCCTAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000172747.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCTAGGCCCAGTCCAGCGGCGGCAGTATCTCTGCCCACACCTCATCCTTCCTTCCACCCATCATGGATaGACTGATGGACACACAGAT | + |
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Preference number: 2 (lower is better) Translates to: PLGPVQRRQYLCPHLILPSTHHG*TDGHTD Trigger: ATCTGTGTGTCCATCAGTCCATCCATGATGGGTGGA...AGGAAGGATGAGGTGTGGGCAGAGATACTGCCGCCGCTGGACTGGGCCTAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
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| 3UTR-3UTR CCA 90 bp | ATCAGCCTGCCTCTGAGTGCTGGGATTCAGAGCCTGTGCCACTACACCAAGCAATTGCAGAGCCTGGGATaGTGGTGTGAGCCTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: ISLPLSAGIQSLCHYTKQLQSLG*WCEPGI Trigger: AATCCCAGGCTCACACCACCATCCCAGGCTCTGCAA...TTGCTTGGTGTAGTGGCACAGGCTCTGAATCCCAGCACTCAGAGGCAGGCTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
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| 3UTR-3UTR TCA 90 bp | AGGCTGGGCCACATGGGCCCTCTAGACTTTAAGCTTTTCTCTCTCACCACGTCCCCATCATGGATGGACTaGTGGACACACAGATGGGTG | + |
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Preference number: 2 (lower is better) Translates to: RLGHMGPLDFKLFSLTTSPSWMD*WTHRWV Trigger: CACCCATCTGTGTGTCCATCAGTCCATCCATGATGG...GGACGTGGTGAGAGAGAAAAGCTTAAAGTCTAGAGGGCCCATGTGGCCCAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
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| 3UTR-3UTR GCA 90 bp | CAGATGTTTCCCCTCCAGCAAATGTTGTCTTTCCGCAGCAGCTTCACTGCACAGCGGCGGCAGTATCTCTaGCCACACCTCATCCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: QMFPLQQMLSFRSSFTAQRRQYL*PHLILP Trigger: AGGAAGGATGAGGTGTGGGCAGAGATACTGCCGCCG...CTGTGCAGTGAAGCTGCTGCGGAAAGACAACATTTGCTGGAGGGGAAACATCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
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| 3UTR-3UTR CCA 90 bp | AGGAAACACTCAACAGACTCCTCCTGTCACAGGGTCTATGCAGGCTGGCACTTACAGAGCCTGGGATGGTaGTGTGAGCCTGGGATTCCA | + |
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Preference number: 2 (lower is better) Translates to: RKHSTDSSCHRVYAGWHLQSLGW*CEPGIP Trigger: TGGAATCCCAGGCTCACACCACCATCCCAGGCTCTG...TAAGTGCCAGCCTGCATAGACCCTGTGACAGGAGGAGTCTGTTGAGTGTTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
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| 3UTR-3UTR TCA 90 bp | CAGAGGGACAACCCTGGGTCCCCTGACTATGATGTAACCAAGAGTACAGTCAGATCCTGGTTTGGCAGCTaGGGTTCCCATCATCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: QRDNPGSPDYDVTKSTVRSWFGS*GSHHPG Trigger: TCCTGGATGATGGGAACCTCAGCTGCCAAACCAGGA...TCTGACTGTACTCTTGGTTACATCATAGTCAGGGGACCCAGGGTTGTCCCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000172747.8 |
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| 3UTR-3UTR TCA 90 bp | AGAAGAGGAGTGAAGCCCACACAAGCTTGTCTCCATGACTCAGCTCTCGTTTCCGAATGGGTAGTCGAGTaGATGGACAGGTGGGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: RRGVKPTQACLHDSALVSEWVVE*MDRWVG Trigger: TCCCACCCACCTGTCCATTCACTCGACTACCCATTC...GGAAACGAGAGCTGAGTCATGGAGACAAGCTTGTGTGGGCTTCACTCCTCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
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| 3UTR-3UTR GCA 90 bp | GACAACCCTGGGTCCCCTGACTATGATGTAACCAAGAGTACAGTCAGATTGAGGCGGCGGCAGTATCTCTaGCCACACCTCATCCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: DNPGSPDYDVTKSTVRLRRRQYL*PHLILP Trigger: AGGAAGGATGAGGTGTGGGCAGAGATACTGCCGCCG...CCTCAATCTGACTGTACTCTTGGTTACATCATAGTCAGGGGACCCAGGGTTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000172747.8 |
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| 3UTR-3UTR CCA 90 bp | ATCAGCCTGCCTCTGAGTGCTGGGATTCAGAGCCTGTGCCACTACACCAAGCAAATTTGGAAAATGGGCTaGACAGATGTGCTGTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: ISLPLSAGIQSLCHYTKQIWKMG*TDVLWA Trigger: GGCCCACAGCACATCTGTCCAGCCCATTTTCCAAAT...TTGCTTGGTGTAGTGGCACAGGCTCTGAATCCCAGCACTCAGAGGCAGGCTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
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| 3UTR-3UTR CCA 90 bp | ACAGCGTCAGCATCATCAGGTCGGCCAGGACATAATACACAGCCGTGTAGGTCTCACAGTGATAGGGCCTaGTCCATGTTGCCTGTCTTG | + |
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Preference number: 2 (lower is better) Translates to: TASASSGRPGHNTQPCRSHSDRA*SMLPVL Trigger: CAAGACAGGCAACATGGACCAGGCCCTATCACTGTG...AGACCTACACGGCTGTGTATTATGTCCTGGCCGACCTGATGATGCTGACGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141007.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGACAACCCTGGGTCCCCTGACTATGATGTAACCAAGAGTACAGTCAGATTGTCCTGGTTTGGCAGCTaGGGTTCCCATCATCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: RDNPGSPDYDVTKSTVRLSWFGS*GSHHPG Trigger: TCCTGGATGATGGGAACCTCAGCTGCCAAACCAGGA...CAATCTGACTGTACTCTTGGTTACATCATAGTCAGGGGACCCAGGGTTGTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000172747.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGGGCCTCTGTCTCCCCCAAACCAGGAGAGTCCAGTGGTGATTCACTCCACGATGTTGGATTATAGATaGAGGATGGGTGGACAAATG | + |
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Preference number: 2 (lower is better) Translates to: LGPLSPPNQESPVVIHSTMLDYR*RMGGQM Trigger: CATTTGTCCACCCATCCTTCATCTATAATCCAACAT...CGTGGAGTGAATCACCACTGGACTCTCCTGGTTTGGGGGAGACAGAGGCCCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
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| 3UTR-3UTR CCA 90 bp | CGGAGAAGAGGAGTGAAGCCCACACAAGCTTGTCTCCATGACTCAGCTCTCGTTTCATCCTTCCTGGTTTaGCAGCTGAGGTTCCCATCA | + |
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Preference number: 2 (lower is better) Translates to: RRRGVKPTQACLHDSALVSSFLV*QLRFPS Trigger: TGATGGGAACCTCAGCTGCCAAACCAGGAAGGATGA...AACGAGAGCTGAGTCATGGAGACAAGCTTGTGTGGGCTTCACTCCTCTTCTCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
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| 3UTR-3UTR CCA 90 bp | AGGAAACACTCAACAGACTCCTCCTGTCACAGGGTCTATGCAGGCTGGCACTTACTGTTTAGCTCTGGCTaGGACACCTGTGTAGGGCTA | + |
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Preference number: 2 (lower is better) Translates to: RKHSTDSSCHRVYAGWHLLFSSG*DTCVGL Trigger: TAGCCCTACACAGGTGTCCCAGCCAGAGCTAAACAG...TAAGTGCCAGCCTGCATAGACCCTGTGACAGGAGGAGTCTGTTGAGTGTTTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
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| 3UTR-3UTR TCA 90 bp | TCCAATTTGGAAAATGGGCTGGACAGATGTGCTGTGGGCCAAGTATTATCCCTGTCCTGGTTTGGCAGCTaGGGTTCCCATCATCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: SNLENGLDRCAVGQVLSLSWFGS*GSHHPG Trigger: TCCTGGATGATGGGAACCTCAGCTGCCAAACCAGGA...CAGGGATAATACTTGGCCCACAGCACATCTGTCCAGCCCATTTTCCAAATTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
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| 3UTR-3UTR GCA 90 bp | TCCAATTTGGAAAATGGGCTGGACAGATGTGCTGTGGGCCAAGTATTATCCCTGCCGCAGCAGCTTCACTaGACAGCTCCTTCTACACAG | + |
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Preference number: 2 (lower is better) Translates to: SNLENGLDRCAVGQVLSLPQQLH*TAPSTQ Trigger: CTGTGTAGAAGGAGCTGTGCAGTGAAGCTGCTGCGG...CAGGGATAATACTTGGCCCACAGCACATCTGTCCAGCCCATTTTCCAAATTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
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| 3UTR-3UTR CCA 90 bp | AGTCAGAGGGACAACCCTGGGTCCCCTGACTATGATGTAACCAAGAGTACAGTCTCATCCTTCCTGGTTTaGCAGCTGAGGTTCCCATCA | + |
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Preference number: 2 (lower is better) Translates to: SQRDNPGSPDYDVTKSTVSSFLV*QLRFPS Trigger: TGATGGGAACCTCAGCTGCCAAACCAGGAAGGATGA...GACTGTACTCTTGGTTACATCATAGTCAGGGGACCCAGGGTTGTCCCTCTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000172747.8 |
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| 3UTR-3UTR CCA 90 bp | CGGAGAAGAGGAGTGAAGCCCACACAAGCTTGTCTCCATGACTCAGCTCTCGTTGTAGATGGATGGGGATaGACAGGTAAATGGAGGTTG | + |
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Preference number: 2 (lower is better) Translates to: RRRGVKPTQACLHDSALVVDGWG*TGKWRL Trigger: CAACCTCCATTTACCTGTCCATCCCCATCCATCTAC...AACGAGAGCTGAGTCATGGAGACAAGCTTGTGTGGGCTTCACTCCTCTTCTCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
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| 3UTR-3UTR CCA 90 bp | CAGAGAACAGTAGGAAACACTCAACAGACTCCTCCTGTCACAGGGTCTATGCAGATAGATTGCAGAGCCTaGGATGGTGGTGTGAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: QRTVGNTQQTPPVTGSMQIDCRA*DGGVSL Trigger: CAGGCTCACACCACCATCCCAGGCTCTGCAATCTAT...CTGCATAGACCCTGTGACAGGAGGAGTCTGTTGAGTGTTTCCTACTGTTCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
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| 3UTR-3UTR GCA 90 bp | CAGAGAACAGTAGGAAACACTCAACAGACTCCTCCTGTCACAGGGTCTATGCAGCTTTGCTGTATGGGTTaGCTCTCTTTGGGATCTGGG | + |
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Preference number: 2 (lower is better) Translates to: QRTVGNTQQTPPVTGSMQLCCMG*LSLGSG Trigger: CCCAGATCCCAAAGAGAGGCAACCCATACAGCAAAG...CTGCATAGACCCTGTGACAGGAGGAGTCTGTTGAGTGTTTCCTACTGTTCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
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| 3UTR-3UTR CCA 90 bp | ATGGGAGGTGACCATACCGTCTTCTGGGGTCTCAGCTATGGGTGCCCTAGAGGCGGTTGGATGAAATGTTaGATTATAGATGAAGGATGG | + |
|
Preference number: 2 (lower is better) Translates to: MGGDHTVFWGLSYGCPRGGWMKC*IIDEGW Trigger: CCATCCTTCATCTATAATCCAACATTTCATCCAACC...GCCTCTAGGGCACCCATAGCTGAGACCCCAGAAGACGGTATGGTCACCTCCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
||
| 3UTR-3UTR TCA 90 bp | CAACGGAGAAGGTCGCTTCTTGAACTTATAATGGAAGTACAGCGTCAGCATCATCCAGAAAGGAGCCAATaGGGTTGCAGGAATCTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: QRRRSLLELIMEVQRQHHPERSQ*GCRNLH Trigger: GTGGAGATTCCTGCAACCTCATTGGCTCCTTTCTGG...ATGATGCTGACGCTGTACTTCCATTATAAGTTCAAGAAGCGACCTTCTCCGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141007.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTTTTGAGAAACTTTCCAATTTGGAAAATGGGCTGGACAGATGTGCTGTGGGCAGATGTATGCCCCTGTaGAGCACAAGCCAACTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: SFEKLSNLENGLDRCAVGRCMPL*STSQLQ Trigger: CTGGAGTTGGCTTGTGCTGCACAGGGGCATACATCT...GCCCACAGCACATCTGTCCAGCCCATTTTCCAAATTGGAAAGTTTCTCAAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
||
| 3UTR-3UTR CCA 90 bp | CAGAGGGACAACCCTGGGTCCCCTGACTATGATGTAACCAAGAGTACAGTCAGAGGATGGACAGGTAAATaGAGGTTGGATGAAATGTTG | + |
|
Preference number: 2 (lower is better) Translates to: QRDNPGSPDYDVTKSTVRGWTGK*RLDEML Trigger: CAACATTTCATCCAACCTCCATTTACCTGTCCATCC...TCTGACTGTACTCTTGGTTACATCATAGTCAGGGGACCCAGGGTTGTCCCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
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| 3UTR CAA 90 bp | CAGGCTTCAAAGTCAGCCTCTGCCTCTTTTGAGAAACTTTCCAATTaGGAAAATGGGCTGGACAGATGTGCTGTGGGCCAAGTATTATCC | + |
|
Preference number: 2 (lower is better) Translates to: QASKSASASFEKLSN*ENGLDRCAVGQVLS Trigger: GGATAATACTTGGCCCACAGCACATCTGTCCAGCCCATTTTCCAAATTGGAAAGTTTCTCAAAAGAGGCAGAGGCTGACTTTGAAGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
||
| 3UTR-3UTR CCA 90 bp | AAGGTACCATTTACTAGGTTGTATCCAGTCAGAGGGACAACCCTGGGTCCCCTGATTATAGATGAAGGATaGGTGGACAAATGGGATGTG | + |
|
Preference number: 2 (lower is better) Translates to: KVPFTRLYPVRGTTLGPLIIDEG*VDKWDV Trigger: CACATCCCATTTGTCCACCCATCCTTCATCTATAAT...CAGGGGACCCAGGGTTGTCCCTCTGACTGGATACAACCTAGTAAATGGTACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGAAGGTACCATTTACTAGGTTGTATCCAGTCAGAGGGACAACCCTGGGTCCCAAATGGATGGATAAATaGGAAACTGAATGGGTAGTC | + |
|
Preference number: 2 (lower is better) Translates to: WKVPFTRLYPVRGTTLGPKWMDK*ETEWVV Trigger: GACTACCCATTCAGTTTCCCATTTATCCATCCATTT...GGGACCCAGGGTTGTCCCTCTGACTGGATACAACCTAGTAAATGGTACCTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
||
| 3UTR-3UTR CAA 90 bp | CTAGGCAGCCAGGCCCAGAGTTCCAGGCAGCCCCCTAGGCCCAGTCCAGCGGCGCTCATCCTTCCTGGTTaGGCAGCTGAGGTTCCCATC | + |
|
Preference number: 3 (lower is better) Translates to: LGSQAQSSRQPPRPSPAALILPG*AAEVPI Trigger: GATGGGAACCTCAGCTGCCAAACCAGGAAGGATGAG...CGCCGCTGGACTGGGCCTAGGGGGCTGCCTGGAACTCTGGGCCTGGCTGCCTAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000172747.8 |
||
| 3UTR TCA 72 bp | TTGCTCTCCCACCACCGAGTGCCCTCCTTGATGCCCTaGCTCTGCCATCAGGGACCCTGGAATAGGGCGCTC | + |
|
Preference number: 3 (lower is better) Translates to: LLSHHRVPSLMP*LCHQGPWNRAL Trigger: GAGCGCCCTATTCCAGGGTCCCTGATGGCAGAGTCAGGGCATCAAGGAGGGCACTCGGTGGTGGGAGAGCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
||
| 3UTR TCA 72 bp | CTGTCGCCTTGCTCTCCCACCACCGAGTGCCCTCCTTaGTGCCCTGACTCTGCCATCAGGGACCCTGGAATA | + |
|
Preference number: 3 (lower is better) Translates to: LSPCSPTTECPP*CPDSAIRDPGI Trigger: TATTCCAGGGTCCCTGATGGCAGAGTCAGGGCATCAAGGAGGGCACTCGGTGGTGGGAGAGCAAGGCGACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
||
| 3UTR CCA 72 bp | AATAACTTCTCCCCCAGTCCCGGTGCGATGACCTGCTaGGGCCTCTGTCTCCCCCAAACCAGGAGAGTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: NNFSPSPGAMTC*GLCLPQTRRVQ Trigger: CTGGACTCTCCTGGTTTGGGGGAGACAGAGGCCCCAGCAGGTCATCGCACCGGGACTGGGGGAGAAGTTATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
||
| 3UTR TCA 72 bp | TGCCCCTGTGCAGCACAAGCCAACTCCAGATCTGTCTaGAGGTCAGGAGGAGTTCTAGGCAGCCAGGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: CPCAAQANSRSV*RSGGVLGSQAQ Trigger: CTGGGCCTGGCTGCCTAGAACTCCTCCTGACCTTCAGACAGATCTGGAGTTGGCTTGTGCTGCACAGGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000172747.8 |
||
| 3UTR TCA 72 bp | GGCCTCTGTCTCCCCCAAACCAGGAGAGTCCAGTGGTaGTTCACTCCACGGCGCTGGGTGCCACTGAAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: GLCLPQTRRVQW*FTPRRWVPLKL Trigger: TAACTTCAGTGGCACCCAGCGCCGTGGAGTGAATCACCACTGGACTCTCCTGGTTTGGGGGAGACAGAGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
||
| 3UTR GCA 72 bp | CCACAGTGCACACACTCTTCTGTCCCTTGGGGCCTTTaGACAGGCTGTGCTGGGACTCTGTTCCCTTGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: PQCTHSSVPWGL*TGCAGTLFPCA Trigger: GGCACAAGGGAACAGAGTCCCAGCACAGCCTGTGCAAAGGCCCCAAGGGACAGAAGAGTGTGTGCACTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTTCTGGGGTCTCAGCTATGGGTGCCCTAGAGGCTCCTCGGGCAGCTGTCATACTCATCCTTCCTGGTTaGGCAGCTGAGGTTCCCATC | + |
|
Preference number: 3 (lower is better) Translates to: SSGVSAMGALEAPRAAVILILPG*AAEVPI Trigger: GATGGGAACCTCAGCTGCCAAACCAGGAAGGATGAG...TATGACAGCTGCCCGAGGAGCCTCTAGGGCACCCATAGCTGAGACCCCAGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000172747.8 |
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| 3UTR-3UTR CAA 90 bp | AGATCTGAGGACACTGTTAAGGTACTGCAGCCACACTGGGCCAGCCCTGCTCCTGTGCACGCTCTGTCCTaGCTCACTGATGGGACTGGT | + |
|
Preference number: 3 (lower is better) Translates to: RSEDTVKVLQPHWASPAPVHALS*LTDGTG Trigger: ACCAGTCCCATCAGTGAGCAAGGACAGAGCGTGCAC...AGGAGCAGGGCTGGCCCAGTGTGGCTGCAGTACCTTAACAGTGTCCTCAGATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
||
| 3UTR-3UTR CAA 90 bp | CGGAGAAGAGGAGTGAAGCCCACACAAGCTTGTCTCCATGACTCAGCTCTCGTTTGTCCCTTGGGGCCTTaGCACAGGCTGTGCTGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: RRRGVKPTQACLHDSALVCPLGP*HRLCWD Trigger: GTCCCAGCACAGCCTGTGCAAAGGCCCCAAGGGACA...AACGAGAGCTGAGTCATGGAGACAAGCTTGTGTGGGCTTCACTCCTCTTCTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
||
| 3UTR GCA 72 bp | CCTTTGCACAGGCTGTGCTGGGACTCTGTTCCCTTGTaGCTGAATAACTTCTCCCCCAGTCCCGGTGCGATG | + |
|
Preference number: 3 (lower is better) Translates to: PLHRLCWDSVPL*LNNFSPSPGAM Trigger: CATCGCACCGGGACTGGGGGAGAAGTTATTCAGGCACAAGGGAACAGAGTCCCAGCACAGCCTGTGCAAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
||
| 3UTR GCA 72 bp | GAACTGGATGGAGATCTGAGGACACTGTTAAGGTACTaGAGCCACACTGGGCCAGCCCTGCTCCTGTCGCCT | + |
|
Preference number: 3 (lower is better) Translates to: ELDGDLRTLLRY*SHTGPALLLSP Trigger: AGGCGACAGGAGCAGGGCTGGCCCAGTGTGGCTGCAGTACCTTAACAGTGTCCTCAGATCTCCATCCAGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
||
| 3UTR CCA 72 bp | TCCTTCTACACAGCTGGCCTCTGCATACTCGTCTTCTaGGGTCTCAGCTATGGGTGCCCTAGAGGCTCCTCG | + |
|
Preference number: 3 (lower is better) Translates to: SFYTAGLCILVF*GLSYGCPRGSS Trigger: CGAGGAGCCTCTAGGGCACCCATAGCTGAGACCCCAGAAGACGAGTATGCAGAGGCCAGCTGTGTAGAAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
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| 3UTR TCA 72 bp | GGGTGTTCAGACACTGATGCCAGCAGGGACAGTGACTaGAACCCTGAGGGTCTGACTGGCAGTTCACCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: GCSDTDASRDSD*NPEGLTGSSPL Trigger: CAAGGGTGAACTGCCAGTCAGACCCTCAGGGTTTCAGTCACTGTCCCTGCTGGCATCAGTGTCTGAACACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
||
| 3UTR CCA 72 bp | CCGATCCAGCCCAGCAGGAACCACAGTGATAGGGCCTaGTCCATGTTGCCTGTCTTGCAGGCTTTGATGTAC | + |
|
Preference number: 3 (lower is better) Translates to: PIQPSRNHSDRA*SMLPVLQALMY Trigger: GTACATCAAAGCCTGCAAGACAGGCAACATGGACCAGGCCCTATCACTGTGGTTCCTGCTGGGCTGGATCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141007.2 |
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| 3UTR-3UTR CAA 90 bp | GGCCTTGAACTCATAGAGATCAGCCTGCCTCTGAGTGCTGGGATTCAGAGCCTGCTCATCCTTCCTGGTTaGGCAGCTGAGGTTCCCATC | + |
|
Preference number: 3 (lower is better) Translates to: GLELIEISLPLSAGIQSLLILPG*AAEVPI Trigger: GATGGGAACCTCAGCTGCCAAACCAGGAAGGATGAG...CAGGCTCTGAATCCCAGCACTCAGAGGCAGGCTGATCTCTATGAGTTCAAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
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| 3UTR CCA 72 bp | AAGATACGCCAAGATAGATTGCAGAGCCTGGGATGGTaGTGTGAGCCTGGGATTCCAGCACCTGGGAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: KIRQDRLQSLGW*CEPGIPAPGRW Trigger: CCATCTCCCAGGTGCTGGAATCCCAGGCTCACACCACCATCCCAGGCTCTGCAATCTATCTTGGCGTATCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
||
| 3UTR TCA 72 bp | TATGCAGGCTGGCACTTAATGTCACTGTACAGTTGCTaGGCCCTGGCTGGCCTGGAACTCACCATGAAGACC | + |
|
Preference number: 3 (lower is better) Translates to: YAGWHLMSLYSC*ALAGLELTMKT Trigger: GGTCTTCATGGTGAGTTCCAGGCCAGCCAGGGCTCAGCAACTGTACAGTGACATTAAGTGCCAGCCTGCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
||
| 3UTR GCA 72 bp | CCTCCAGCAAATGTTGTCTTTCCGCAGCAGCTTCACTaGACAGCTCCTTCTACACAGCTGGCCTCTGCATAC | + |
|
Preference number: 3 (lower is better) Translates to: PPANVVFPQQLH*TAPSTQLASAY Trigger: GTATGCAGAGGCCAGCTGTGTAGAAGGAGCTGTGCAGTGAAGCTGCTGCGGAAAGACAACATTTGCTGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
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| 3UTR CCA 72 bp | ATCAAGATACGCCAAGATAGATTGCAGAGCCTGGGATaGTGGTGTGAGCCTGGGATTCCAGCACCTGGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: IKIRQDRLQSLG*WCEPGIPAPGR Trigger: TCTCCCAGGTGCTGGAATCCCAGGCTCACACCACCATCCCAGGCTCTGCAATCTATCTTGGCGTATCTTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
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| 3UTR GCA 72 bp | AAGCTTGTCTCCATGACTCAGCTCTCGTTTCCACAGTaGACACACTCTTCTGTCCCTTGGGGCCTTTGCACA | + |
|
Preference number: 3 (lower is better) Translates to: KLVSMTQLSFPQ*THSSVPWGLCT Trigger: TGTGCAAAGGCCCCAAGGGACAGAAGAGTGTGTGCACTGTGGAAACGAGAGCTGAGTCATGGAGACAAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
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| 3UTR-3UTR CAA 90 bp | AGGGACAACCCTGGGTCCCCTGACTATGATGTAACCAAGAGTACAGTCAGATTGCTCATCCTTCCTGGTTaGGCAGCTGAGGTTCCCATC | + |
|
Preference number: 3 (lower is better) Translates to: RDNPGSPDYDVTKSTVRLLILPG*AAEVPI Trigger: GATGGGAACCTCAGCTGCCAAACCAGGAAGGATGAG...CAATCTGACTGTACTCTTGGTTACATCATAGTCAGGGGACCCAGGGTTGTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000172747.8 |
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| 3UTR-3UTR CAA 90 bp | GGAAGTACAGCGTCAGCATCATCAGGTCGGCCAGGACATAATACACAGCCGTGTTCCATGTTGCCTGTCTaGCAGGCTTTGATGTACTGG | + |
|
Preference number: 3 (lower is better) Translates to: GSTASASSGRPGHNTQPCSMLPV*QALMYW Trigger: CCAGTACATCAAAGCCTGCAAGACAGGCAACATGGA...ACACGGCTGTGTATTATGTCCTGGCCGACCTGATGATGCTGACGCTGTACTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141007.2 |
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| 3UTR GCA 72 bp | GGCTGGACAGATGTGCTGTGGGCCAAGTATTATCCCTaGAGATGTTTCCCCTCCAGCAAATGTTGTCTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: GWTDVLWAKYYP*RCFPSSKCCLS Trigger: GGAAAGACAACATTTGCTGGAGGGGAAACATCTGCAGGGATAATACTTGGCCCACAGCACATCTGTCCAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
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| 3UTR CCA 72 bp | CAGCAGTCTCATGGCTTCTGTACACCAGGAACTGGATaGAGATCTGAGGACACTGTTAAGGTACTGCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: QQSHGFCTPGTG*RSEDTVKVLQP Trigger: TGGCTGCAGTACCTTAACAGTGTCCTCAGATCTCCATCCAGTTCCTGGTGTACAGAAGCCATGAGACTGCTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
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| 3UTR GCA 72 bp | GAAACACTCAACAGACTCCTCCTGTCACAGGGTCTATaGAGGCTGGCACTTAATGTCACTGTACAGTTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: ETLNRLLLSQGL*RLALNVTVQLL Trigger: CAGCAACTGTACAGTGACATTAAGTGCCAGCCTGCATAGACCCTGTGACAGGAGGAGTCTGTTGAGTGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
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| 3UTR GCA 72 bp | TGTATGGGTTGCCTCTCTTTGGGATCTGGGTCTGTCTaGGTGCGATATAACATGCTTAAGTCACTAGAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: CMGCLSLGSGSV*VRYNMLKSLES Trigger: GCTCTCTAGTGACTTAAGCATGTTATATCGCACGCAGACAGACCCAGATCCCAAAGAGAGGCAACCCATACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
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| 3UTR CCA 72 bp | AGTCAGCCTCTGCCTCTTTTGAGAAACTTTCCAATTTaGAAAATGGGCTGGACAGATGTGCTGTGGGCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: SQPLPLLRNFPI*KMGWTDVLWAK Trigger: CTTGGCCCACAGCACATCTGTCCAGCCCATTTTCCAAATTGGAAAGTTTCTCAAAAGAGGCAGAGGCTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
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| 3UTR GCA 72 bp | GAAACTTTCCAATTTGGAAAATGGGCTGGACAGATGTaGTGTGGGCCAAGTATTATCCCTGCAGATGTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: ETFQFGKWAGQM*CGPSIIPADVS Trigger: GGAAACATCTGCAGGGATAATACTTGGCCCACAGCACATCTGTCCAGCCCATTTTCCAAATTGGAAAGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
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| 3UTR CCA 72 bp | CTAGACTTTAAGCTTTTCTCTCTCACCACGTCCCACTaGGACTCTCCAAATGTTGACACAAAGACCGTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: LDFKLFSLTTSH*DSPNVDTKTVF Trigger: AAACACGGTCTTTGTGTCAACATTTGGAGAGTCCCAGTGGGACGTGGTGAGAGAGAAAAGCTTAAAGTCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
||
| 3UTR CCA 72 bp | CCTCTTTTGAGAAACTTTCCAATTTGGAAAATGGGCTaGACAGATGTGCTGTGGGCCAAGTATTATCCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: PLLRNFPIWKMG*TDVLWAKYYPC Trigger: GCAGGGATAATACTTGGCCCACAGCACATCTGTCCAGCCCATTTTCCAAATTGGAAAGTTTCTCAAAAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
||
| 3UTR CCA 72 bp | GGGGATGGACAGGTAAATGGAGGTTGGATGAAATGTTaGATTATAGATGAAGGATGGGTGGACAAATGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: GDGQVNGGWMKC*IIDEGWVDKWD Trigger: ATCCCATTTGTCCACCCATCCTTCATCTATAATCCAACATTTCATCCAACCTCCATTTACCTGTCCATCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
||
| CDS-3UTR CCA 90 bp | CTAGGCAGCCAGGCCCAGAGTTCCAGGCAGCCCCCTAGGCCCAGTCCAGCGGCGCCCGGAAGCCTTCCCTaGGGACAGCCACAGGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LGSQAQSSRQPPRPSPAAPGSLP*GQPQDQ Trigger: CTGATCCTGTGGCTGTCCCCAGGGAAGGCTTCCGGG...CGCCGCTGGACTGGGCCTAGGGGGCTGCCTGGAACTCTGGGCCTGGCTGCCTAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000172747.8 |
||
| CDS-3UTR TCA 90 bp | CTAGGCAGCCAGGCCCAGAGTTCCAGGCAGCCCCCTAGGCCCAGTCCAGCGGCGCCAGAAAGGAGCCAATaGGGTTGCAGGAATCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LGSQAQSSRQPPRPSPAAPERSQ*GCRNLH Trigger: GTGGAGATTCCTGCAACCTCATTGGCTCCTTTCTGG...CGCCGCTGGACTGGGCCTAGGGGGCTGCCTGGAACTCTGGGCCTGGCTGCCTAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000172747.8 |
||
| CDS-3UTR GCA 90 bp | TCTTCTGGGGTCTCAGCTATGGGTGCCCTAGAGGCTCCTCGGGCAGCTGTCATAGCAGCACCCCCAGGCTaGCCACGAGCCAGGGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSGVSAMGALEAPRAAVIAAPPG*PRARAG Trigger: ACCTGCCCTGGCTCGTGGGCAGCCTGGGGGTGCTGC...TATGACAGCTGCCCGAGGAGCCTCTAGGGCACCCATAGCTGAGACCCCAGAAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000172747.8 |
||
| CDS-3UTR CCA 90 bp | CTAGGCAGCCAGGCCCAGAGTTCCAGGCAGCCCCCTAGGCCCAGTCCAGCGGCGTCATCCCAGCCATCCTaGGCACATTCACCAAACACA | + |
|
Preference number: 4 (lower is better) Translates to: LGSQAQSSRQPPRPSPAASSQPS*AHSPNT Trigger: TGTGTTTGGTGAATGTGCCCAGGATGGCTGGGATGA...CGCCGCTGGACTGGGCCTAGGGGGCTGCCTGGAACTCTGGGCCTGGCTGCCTAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000172747.8 |
||
| CDS-3UTR TCA 90 bp | GTCTTCTGGGGTCTCAGCTATGGGTGCCCTAGAGGCTCCTCGGGCAGCTGTCATGAGGGGCTCTCGCTCTaGGGCAGCAGCAGTCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: VFWGLSYGCPRGSSGSCHEGLSL*GSSSLM Trigger: CATGAGACTGCTGCTGCCTCAGAGCGAGAGCCCCTC...ATGACAGCTGCCCGAGGAGCCTCTAGGGCACCCATAGCTGAGACCCCAGAAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053862.12 ENSMUST00000139840.9 ENSMUST00000172747.8 |
||
| CDS-3UTR CCA 90 bp | TCTGGGGTCTCAGCTATGGGTGCCCTAGAGGCTCCTCGGGCAGCTGTCATACACCCCGGAAGCCTTCCCTaGGGACAGCCACAGGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGVSAMGALEAPRAAVIHPGSLP*GQPQDQ Trigger: CTGATCCTGTGGCTGTCCCCAGGGAAGGCTTCCGGG...GTGTATGACAGCTGCCCGAGGAGCCTCTAGGGCACCCATAGCTGAGACCCCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000172747.8 |
||
| CDS-3UTR TCA 90 bp | CCCCTAGGCCCAGTCCAGCGGCGGCAGTATCTCTGCCCACACCTCATCCTTCCTGGAACTGGATGGAGATaGTGGTGTCGAGCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PLGPVQRRQYLCPHLILPGTGWR*WCRAAA Trigger: TGCTGCTGCTCGACACCATCATCTCCATCCAGTTCC...AGGAAGGATGAGGTGTGGGCAGAGATACTGCCGCCGCTGGACTGGGCCTAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053862.12 ENSMUST00000139840.9 ENSMUST00000172747.8 |
||
| CDS-3UTR TCA 90 bp | TCTTCTGGGGTCTCAGCTATGGGTGCCCTAGAGGCTCCTCGGGCAGCTGTCATAGAGGGGCTCTCGCTCTaGGGCAGCAGCAGTCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: SSGVSAMGALEAPRAAVIEGLSL*GSSSLM Trigger: CATGAGACTGCTGCTGCCTCAGAGCGAGAGCCCCTC...TATGACAGCTGCCCGAGGAGCCTCTAGGGCACCCATAGCTGAGACCCCAGAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053862.12 ENSMUST00000139840.9 ENSMUST00000172747.8 |
||
| CDS-3UTR TCA 90 bp | ATGGGAGGTGACCATACCGTCTTCTGGGGTCTCAGCTATGGGTGCCCTAGAGGCGAGGGGCTCTCGCTCTaGGGCAGCAGCAGTCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: MGGDHTVFWGLSYGCPRGEGLSL*GSSSLM Trigger: CATGAGACTGCTGCTGCCTCAGAGCGAGAGCCCCTC...GCCTCTAGGGCACCCATAGCTGAGACCCCAGAAGACGGTATGGTCACCTCCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053862.12 ENSMUST00000172747.8 |
||
| CDS-3UTR GCA 90 bp | AGTATCTCTGCCCACACCTCATCCTTCCTGGTTTGGCAGCTGAGGTTCCCATCAGCAGCACCCCCAGGCTaGCCACGAGCCAGGGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SISAHTSSFLVWQLRFPSAAPPG*PRARAG Trigger: ACCTGCCCTGGCTCGTGGGCAGCCTGGGGGTGCTGC...TGATGGGAACCTCAGCTGCCAAACCAGGAAGGATGAGGTGTGGGCAGAGATACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000172747.8 |
||
| CDS-3UTR CCA 90 bp | GAGGTGACCATACCGTCTTCTGGGGTCTCAGCTATGGGTGCCCTAGAGGCTCCTCCCGGAAGCCTTCCCTaGGGACAGCCACAGGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: EVTIPSSGVSAMGALEAPPGSLP*GQPQDQ Trigger: CTGATCCTGTGGCTGTCCCCAGGGAAGGCTTCCGGG...AGGAGCCTCTAGGGCACCCATAGCTGAGACCCCAGAAGACGGTATGGTCACCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000172747.8 |
||
| 3UTR CAA 72 bp | GGGCCTTTGCACAGGCTGTGCTGGGACTCTGTTCCCTaGTGCCTGAATAACTTCTCCCCCAGTCCCGGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: GPLHRLCWDSVP*CLNNFSPSPGA Trigger: CGCACCGGGACTGGGGGAGAAGTTATTCAGGCACAAGGGAACAGAGTCCCAGCACAGCCTGTGCAAAGGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
||
| CDS-3UTR GCA 90 bp | CCCCTAGGCCCAGTCCAGCGGCGGCAGTATCTCTGCCCACACCTCATCCTTCCTACAGCGAGTAGGAGATaGCTTGGGTTGACTGCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: PLGPVQRRQYLCPHLILPTASRR*LGLTAV Trigger: TACGGCAGTCAACCCAAGGCATCTCCTACTCGCTGT...AGGAAGGATGAGGTGTGGGCAGAGATACTGCCGCCGCTGGACTGGGCCTAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000172747.8 |
||
| CDS-3UTR GCA 90 bp | TGGAAGGTACCATTTACTAGGTTGTATCCAGTCAGAGGGACAACCCTGGGTCCCGCAGCACCCCCAGGCTaGCCACGAGCCAGGGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WKVPFTRLYPVRGTTLGPAAPPG*PRARAG Trigger: ACCTGCCCTGGCTCGTGGGCAGCCTGGGGGTGCTGC...GGGACCCAGGGTTGTCCCTCTGACTGGATACAACCTAGTAAATGGTACCTTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000172747.8 |
||
| CDS-3UTR GCA 90 bp | TTTCCCCTCCAGCAAATGTTGTCTTTCCGCAGCAGCTTCACTGCACAGCTCCTTGCAGCACCCCCAGGCTaGCCACGAGCCAGGGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FPLQQMLSFRSSFTAQLLAAPPG*PRARAG Trigger: ACCTGCCCTGGCTCGTGGGCAGCCTGGGGGTGCTGC...AAGGAGCTGTGCAGTGAAGCTGCTGCGGAAAGACAACATTTGCTGGAGGGGAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
||
| CDS-3UTR CCA 90 bp | GATGGTGGTGTGAGCCTGGGATTCCAGCACCTGGGAGATGGAGGCGGGATCGTCAGCCATTGGGACAGGTaGAAAAGTTGCTGGCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DGGVSLGFQHLGDGGGIVSHWDR*KSCWRP Trigger: TGGGCGCCAGCAACTTTTCCACCTGTCCCAATGGCT...GACGATCCCGCCTCCATCTCCCAGGTGCTGGAATCCCAGGCTCACACCACCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
||
| CDS-3UTR CCA 90 bp | CACACCTCATCCTTCCTGGTTTGGCAGCTGAGGTTCCCATCATCCAGGACGATGAGCCCAGGCCCACGCTaGCCTCATCCCAGCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: HTSSFLVWQLRFPSSRTMSPGPR*PHPSHP Trigger: AGGATGGCTGGGATGAGGCCAGCGTGGGCCTGGGCT...CATCGTCCTGGATGATGGGAACCTCAGCTGCCAAACCAGGAAGGATGAGGTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000172747.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTTGAACTCATAGAGATCAGCCTGCCTCTGAGTGCTGGGATTCAGAGCCTGAGCCCAGGCCCACGCTaGCCTCATCCCAGCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLELIEISLPLSAGIQSLSPGPR*PHPSHP Trigger: AGGATGGCTGGGATGAGGCCAGCGTGGGCCTGGGCT...CAGGCTCTGAATCCCAGCACTCAGAGGCAGGCTGATCTCTATGAGTTCAAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
||
| CDS-3UTR GCA 90 bp | TGGAATAGGGCGCTCTTCCTCCCTACAACACCCAGAGGCTGGGCCACATGGGCCACAGCGAGTAGGAGATaGCTTGGGTTGACTGCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: WNRALFLPTTPRGWATWATASRR*LGLTAV Trigger: TACGGCAGTCAACCCAAGGCATCTCCTACTCGCTGT...GGCCCATGTGGCCCAGCCTCTGGGTGTTGTAGGGAGGAAGAGCGCCCTATTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
||
| CDS-3UTR CCA 90 bp | TCTGGGGTCTCAGCTATGGGTGCCCTAGAGGCTCCTCGGGCAGCTGTCATACACAGCCATTGGGACAGGTaGAAAAGTTGCTGGCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGVSAMGALEAPRAAVIHSHWDR*KSCWRP Trigger: TGGGCGCCAGCAACTTTTCCACCTGTCCCAATGGCT...GTGTATGACAGCTGCCCGAGGAGCCTCTAGGGCACCCATAGCTGAGACCCCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000172747.8 |
||
| CDS-3UTR CCA 90 bp | AGTATCTCTGCCCACACCTCATCCTTCCTGGTTTGGCAGCTGAGGTTCCCATCAAGCCCAGGCCCACGCTaGCCTCATCCCAGCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SISAHTSSFLVWQLRFPSSPGPR*PHPSHP Trigger: AGGATGGCTGGGATGAGGCCAGCGTGGGCCTGGGCT...TGATGGGAACCTCAGCTGCCAAACCAGGAAGGATGAGGTGTGGGCAGAGATACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000172747.8 |
||
| CDS-3UTR TCA 90 bp | GAGGTGACCATACCGTCTTCTGGGGTCTCAGCTATGGGTGCCCTAGAGGCTCCTGGAACTGGATGGAGATaGTGGTGTCGAGCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EVTIPSSGVSAMGALEAPGTGWR*WCRAAA Trigger: TGCTGCTGCTCGACACCATCATCTCCATCCAGTTCC...AGGAGCCTCTAGGGCACCCATAGCTGAGACCCCAGAAGACGGTATGGTCACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053862.12 ENSMUST00000172747.8 |
||
| CDS-3UTR CCA 90 bp | AGTCAGAGGGACAACCCTGGGTCCCCTGACTATGATGTAACCAAGAGTACAGTCAGCCCAGGCCCACGCTaGCCTCATCCCAGCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SQRDNPGSPDYDVTKSTVSPGPR*PHPSHP Trigger: AGGATGGCTGGGATGAGGCCAGCGTGGGCCTGGGCT...GACTGTACTCTTGGTTACATCATAGTCAGGGGACCCAGGGTTGTCCCTCTGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000172747.8 |
||
| CDS-3UTR CCA 90 bp | ACACCAAGCAAGCTGTTTAGCTCTGGCTGGGACACCTGTGTAGGGCTACTTGTGCCCGGAAGCCTTCCCTaGGGACAGCCACAGGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: TPSKLFSSGWDTCVGLLVPGSLP*GQPQDQ Trigger: CTGATCCTGTGGCTGTCCCCAGGGAAGGCTTCCGGG...CACAAGTAGCCCTACACAGGTGTCCCAGCCAGAGCTAAACAGCTTGCTTGGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
||
| 3UTR CAA 72 bp | AGGGGTAGCTGGTCTGCCAGAAAGGAGCCAATGAGGTaGCAGGAATCTCCACCGATCCAGCCCAGCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RGSWSARKEPMR*QESPPIQPSRN Trigger: GTTCCTGCTGGGCTGGATCGGTGGAGATTCCTGCAACCTCATTGGCTCCTTTCTGGCAGACCAGCTACCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141007.2 |
||
| CDS-3UTR TCA 90 bp | GGTCTCAGCTATGGGTGCCCTAGAGGCTCCTCGGGCAGCTGTCATACACCTGAGGGAGATGCCTTGGGTTaGCTGCCGTATGAAATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLSYGCPRGSSGSCHTPEGDALG*LPYEIG Trigger: ACCAATTTCATACGGCAGTCAACCCAAGGCATCTCC...CTCAGGTGTATGACAGCTGCCCGAGGAGCCTCTAGGGCACCCATAGCTGAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000172747.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGCCCACACCTCATCCTTCCTGGTTTGGCAGCTGAGGTTCCCATCATCCAGCCCCAGCATCACCAGTaGGAACAGCGAGTAGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LCPHLILPGLAAEVPIIQPQHHQ*EQRVGD Trigger: ATCTCCTACTCGCTGTTCGCACTGGTGATGCTGGGG...CTGGATGATGGGAACCTCAGCTGCCAAACCAGGAAGGATGAGGTGTGGGCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000172747.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCTGGGGTCTCAGCTATGGGTGCCCTAGAGGCTCCTCGGGCAGCTGTCATACACAGTGATAGGGCCTaGTCCATGTTGCCTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSGVSAMGALEAPRAAVIHSDRA*SMLPVL Trigger: CAAGACAGGCAACATGGACCAGGCCCTATCACTGTG...TATGACAGCTGCCCGAGGAGCCTCTAGGGCACCCATAGCTGAGACCCCAGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000172747.8 |
||
| CDS-3UTR CCA 90 bp | GAGGTGACCATACCGTCTTCTGGGGTCTCAGCTATGGGTGCCCTAGAGGCTCCTGCAGCAGCAGTCTCATaGCTTCTGTACACCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: EVTIPSSGVSAMGALEAPAAAVS*LLYTRN Trigger: GTTCCTGGTGTACAGAAGCCATGAGACTGCTGCTGC...AGGAGCCTCTAGGGCACCCATAGCTGAGACCCCAGAAGACGGTATGGTCACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053862.12 ENSMUST00000172747.8 |
||
| CDS-3UTR TCA 90 bp | ATCAGCCTGCCTCTGAGTGCTGGGATTCAGAGCCTGTGCCACTACACCAAGCAAGGAACTGGATGGAGATaGTGGTGTCGAGCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ISLPLSAGIQSLCHYTKQGTGWR*WCRAAA Trigger: TGCTGCTGCTCGACACCATCATCTCCATCCAGTTCC...TTGCTTGGTGTAGTGGCACAGGCTCTGAATCCCAGCACTCAGAGGCAGGCTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
||
| CDS-3UTR CCA 90 bp | GAGGTGACCATACCGTCTTCTGGGGTCTCAGCTATGGGTGCCCTAGAGGCTCCTTCATCCCAGCCATCCTaGGCACATTCACCAAACACA | + |
|
Preference number: 4 (lower is better) Translates to: EVTIPSSGVSAMGALEAPSSQPS*AHSPNT Trigger: TGTGTTTGGTGAATGTGCCCAGGATGGCTGGGATGA...AGGAGCCTCTAGGGCACCCATAGCTGAGACCCCAGAAGACGGTATGGTCACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000172747.8 |
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| CDS-3UTR TCA 90 bp | ATCTCTGCCCACACCTCATCCTTCCTGGTTTGGCAGCTGAGGTTCCCATCATCCCCAGAAAGGAGCCAATaGGGTTGCAGGAATCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ISAHTSSFLVWQLRFPSSPERSQ*GCRNLH Trigger: GTGGAGATTCCTGCAACCTCATTGGCTCCTTTCTGG...GGATGATGGGAACCTCAGCTGCCAAACCAGGAAGGATGAGGTGTGGGCAGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000172747.8 |
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| CDS-3UTR CCA 90 bp | AGTATCTCTGCCCACACCTCATCCTTCCTGGTTTGGCAGCTGAGGTTCCCATCAAGCCATTGGGACAGGTaGAAAAGTTGCTGGCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SISAHTSSFLVWQLRFPSSHWDR*KSCWRP Trigger: TGGGCGCCAGCAACTTTTCCACCTGTCCCAATGGCT...TGATGGGAACCTCAGCTGCCAAACCAGGAAGGATGAGGTGTGGGCAGAGATACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000172747.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGGCCACATGGGCCCTCTAGACTTTAAGCTTTTCTCTCTCACCACGTCCACATCCCAGATCCACTaGACAGAGCCATTGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: RLGHMGPLDFKLFSLTTSTSQIH*TEPLGQ Trigger: CTGTCCCAATGGCTCTGTCCAGTGGATCTGGGATGT...GGACGTGGTGAGAGAGAAAAGCTTAAAGTCTAGAGGGCCCATGTGGCCCAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
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| CDS-3UTR CCA 90 bp | CAGGGTCTATGCAGGCTGGCACTTAATGTCACTGTACAGTTGCTGAGCCCTGGCACATCCCAGATCCACTaGACAGAGCCATTGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: QGLCRLALNVTVQLLSPGTSQIH*TEPLGQ Trigger: CTGTCCCAATGGCTCTGTCCAGTGGATCTGGGATGT...GCCAGGGCTCAGCAACTGTACAGTGACATTAAGTGCCAGCCTGCATAGACCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
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| CDS-3UTR CCA 90 bp | CACACCTCATCCTTCCTGGTTTGGCAGCTGAGGTTCCCATCATCCAGGACGATGACATCCCAGATCCACTaGACAGAGCCATTGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: HTSSFLVWQLRFPSSRTMTSQIH*TEPLGQ Trigger: CTGTCCCAATGGCTCTGTCCAGTGGATCTGGGATGT...CATCGTCCTGGATGATGGGAACCTCAGCTGCCAAACCAGGAAGGATGAGGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000172747.8 |
||
| CDS-3UTR CCA 90 bp | CAGTATCTCTGCCCACACCTCATCCTTCCTGGTTTGGCAGCTGAGGTTCCCATCCACAGTGATAGGGCCTaGTCCATGTTGCCTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QYLCPHLILPGLAAEVPIHSDRA*SMLPVL Trigger: CAAGACAGGCAACATGGACCAGGCCCTATCACTGTG...GATGGGAACCTCAGCTGCCAAACCAGGAAGGATGAGGTGTGGGCAGAGATACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000172747.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGCCCACACCTCATCCTTCCTGGTTTGGCAGCTGAGGTTCCCATCATCCAGCTGTACACCAGGAACTaGATGGAGATGATGGTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LCPHLILPGLAAEVPIIQLYTRN*MEMMVS Trigger: CGACACCATCATCTCCATCCAGTTCCTGGTGTACAG...CTGGATGATGGGAACCTCAGCTGCCAAACCAGGAAGGATGAGGTGTGGGCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053862.12 ENSMUST00000139840.9 ENSMUST00000172747.8 |
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| CDS-3UTR CCA 90 bp | CACACCTCATCCTTCCTGGTTTGGCAGCTGAGGTTCCCATCATCCAGGACGATGGCAGCAGCAGTCTCATaGCTTCTGTACACCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HTSSFLVWQLRFPSSRTMAAAVS*LLYTRN Trigger: GTTCCTGGTGTACAGAAGCCATGAGACTGCTGCTGC...CATCGTCCTGGATGATGGGAACCTCAGCTGCCAAACCAGGAAGGATGAGGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053862.12 ENSMUST00000139840.9 ENSMUST00000172747.8 |
||
| CDS-3UTR GCA 90 bp | AGTATCTCTGCCCACACCTCATCCTTCCTGGTTTGGCAGCTGAGGTTCCCATCAACAGCGAGTAGGAGATaGCTTGGGTTGACTGCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: SISAHTSSFLVWQLRFPSTASRR*LGLTAV Trigger: TACGGCAGTCAACCCAAGGCATCTCCTACTCGCTGT...TGATGGGAACCTCAGCTGCCAAACCAGGAAGGATGAGGTGTGGGCAGAGATACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000172747.8 |
||
| CDS-3UTR CCA 90 bp | AGTCAGAGGGACAACCCTGGGTCCCCTGACTATGATGTAACCAAGAGTACAGTCAGCCATTGGGACAGGTaGAAAAGTTGCTGGCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQRDNPGSPDYDVTKSTVSHWDR*KSCWRP Trigger: TGGGCGCCAGCAACTTTTCCACCTGTCCCAATGGCT...GACTGTACTCTTGGTTACATCATAGTCAGGGGACCCAGGGTTGTCCCTCTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000172747.8 |
||
| CDS-3UTR CCA 90 bp | GTACAGCGTCAGCATCATCAGGTCGGCCAGGACATAATACACAGCCGTGTAGGTACATCCCAGATCCACTaGACAGAGCCATTGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: VQRQHHQVGQDIIHSRVGTSQIH*TEPLGQ Trigger: CTGTCCCAATGGCTCTGTCCAGTGGATCTGGGATGT...ACCTACACGGCTGTGTATTATGTCCTGGCCGACCTGATGATGCTGACGCTGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141007.2 |
||
| CDS-3UTR CCA 90 bp | CAACGGAGAAGGTCGCTTCTTGAACTTATAATGGAAGTACAGCGTCAGCATCATAGCCCAGGCCCACGCTaGCCTCATCCCAGCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: QRRRSLLELIMEVQRQHHSPGPR*PHPSHP Trigger: AGGATGGCTGGGATGAGGCCAGCGTGGGCCTGGGCT...ATGATGCTGACGCTGTACTTCCATTATAAGTTCAAGAAGCGACCTTCTCCGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141007.2 |
||
| CDS-3UTR TCA 90 bp | GAGTACAGTCAGATTGAGGTAGGTAGATGGGAGGTGACCATACCGTCTTCTGGGCCAGAAAGGAGCCAATaGGGTTGCAGGAATCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EYSQIEVGRWEVTIPSSGPERSQ*GCRNLH Trigger: GTGGAGATTCCTGCAACCTCATTGGCTCCTTTCTGG...CCCAGAAGACGGTATGGTCACCTCCCATCTACCTACCTCAATCTGACTGTACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000172747.8 |
||
| CDS-3UTR GCA 90 bp | CAGATGTTTCCCCTCCAGCAAATGTTGTCTTTCCGCAGCAGCTTCACTGCACAGACAGCGAGTAGGAGATaGCTTGGGTTGACTGCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: QMFPLQQMLSFRSSFTAQTASRR*LGLTAV Trigger: TACGGCAGTCAACCCAAGGCATCTCCTACTCGCTGT...CTGTGCAGTGAAGCTGCTGCGGAAAGACAACATTTGCTGGAGGGGAAACATCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
||
| CDS-3UTR CCA 90 bp | TGGAAGGTACCATTTACTAGGTTGTATCCAGTCAGAGGGACAACCCTGGGTCCCACATCCCAGATCCACTaGACAGAGCCATTGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: WKVPFTRLYPVRGTTLGPTSQIH*TEPLGQ Trigger: CTGTCCCAATGGCTCTGTCCAGTGGATCTGGGATGT...GGGACCCAGGGTTGTCCCTCTGACTGGATACAACCTAGTAAATGGTACCTTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000172747.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCGTCAGCATCATCAGGTCGGCCAGGACATAATACACAGCCGTGTAGGTCTTCATCCCAGCCATCCTaGGCACATTCACCAAACACA | + |
|
Preference number: 4 (lower is better) Translates to: TASASSGRPGHNTQPCRSSSQPS*AHSPNT Trigger: TGTGTTTGGTGAATGTGCCCAGGATGGCTGGGATGA...AGACCTACACGGCTGTGTATTATGTCCTGGCCGACCTGATGATGCTGACGCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141007.2 |
||
| CDS-3UTR CCA 90 bp | AGTCAGAGGGACAACCCTGGGTCCCCTGACTATGATGTAACCAAGAGTACAGTCCACAGTGATAGGGCCTaGTCCATGTTGCCTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SQRDNPGSPDYDVTKSTVHSDRA*SMLPVL Trigger: CAAGACAGGCAACATGGACCAGGCCCTATCACTGTG...GACTGTACTCTTGGTTACATCATAGTCAGGGGACCCAGGGTTGTCCCTCTGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000172747.8 |
||
| CDS-3UTR TCA 90 bp | AGGGACAACCCTGGGTCCCCTGACTATGATGTAACCAAGAGTACAGTCAGATTGCCAGAAAGGAGCCAATaGGGTTGCAGGAATCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RDNPGSPDYDVTKSTVRLPERSQ*GCRNLH Trigger: GTGGAGATTCCTGCAACCTCATTGGCTCCTTTCTGG...CAATCTGACTGTACTCTTGGTTACATCATAGTCAGGGGACCCAGGGTTGTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000172747.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGAACAGTAGGAAACACTCAACAGACTCCTCCTGTCACAGGGTCTATGCAGCACAGTGATAGGGCCTaGTCCATGTTGCCTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QRTVGNTQQTPPVTGSMQHSDRA*SMLPVL Trigger: CAAGACAGGCAACATGGACCAGGCCCTATCACTGTG...CTGCATAGACCCTGTGACAGGAGGAGTCTGTTGAGTGTTTCCTACTGTTCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
||
| CDS-3UTR CCA 90 bp | CAGATGTTTCCCCTCCAGCAAATGTTGTCTTTCCGCAGCAGCTTCACTGCACAGCTGTACACCAGGAACTaGATGGAGATGATGGTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: QMFPLQQMLSFRSSFTAQLYTRN*MEMMVS Trigger: CGACACCATCATCTCCATCCAGTTCCTGGTGTACAG...CTGTGCAGTGAAGCTGCTGCGGAAAGACAACATTTGCTGGAGGGGAAACATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
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| CDS-3UTR TCA 90 bp | GACAACCCTGGGTCCCCTGACTATGATGTAACCAAGAGTACAGTCAGATTGAGGGGTTGGATGGGTAAATaGAGGGTGGTTAAAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DNPGSPDYDVTKSTVRLRGWMGK*RVVKGW Trigger: CCAGCCTTTAACCACCCTTCATTTACCCATCCAACC...CCTCAATCTGACTGTACTCTTGGTTACATCATAGTCAGGGGACCCAGGGTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
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| CDS-3UTR CCA 90 bp | GACAACCCTGGGTCCCCTGACTATGATGTAACCAAGAGTACAGTCAGATTGAGGTCATCCCAGCCATCCTaGGCACATTCACCAAACACA | + |
|
Preference number: 4 (lower is better) Translates to: DNPGSPDYDVTKSTVRLRSSQPS*AHSPNT Trigger: TGTGTTTGGTGAATGTGCCCAGGATGGCTGGGATGA...CCTCAATCTGACTGTACTCTTGGTTACATCATAGTCAGGGGACCCAGGGTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000172747.8 |
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| 3UTR CAA 72 bp | GTATTATCCCTGCAGATGTTTCCCCTCCAGCAAATGTaGTCTTTCCGCAGCAGCTTCACTGCACAGCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: VLSLQMFPLQQM*SFRSSFTAQLL Trigger: AAGGAGCTGTGCAGTGAAGCTGCTGCGGAAAGACAACATTTGCTGGAGGGGAAACATCTGCAGGGATAATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
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| CDS-3UTR CCA 90 bp | AGAAGGTCGCTTCTTGAACTTATAATGGAAGTACAGCGTCAGCATCATCAGGTCAGCCATTGGGACAGGTaGAAAAGTTGCTGGCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RRSLLELIMEVQRQHHQVSHWDR*KSCWRP Trigger: TGGGCGCCAGCAACTTTTCCACCTGTCCCAATGGCT...GACCTGATGATGCTGACGCTGTACTTCCATTATAAGTTCAAGAAGCGACCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141007.2 |
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| CDS-3UTR CCA 90 bp | TCTGTAATCAAGATACGCCAAGATAGATTGCAGAGCCTGGGATGGTGGTGTGAGTCATCCCAGCCATCCTaGGCACATTCACCAAACACA | + |
|
Preference number: 4 (lower is better) Translates to: SVIKIRQDRLQSLGWWCESSQPS*AHSPNT Trigger: TGTGTTTGGTGAATGTGCCCAGGATGGCTGGGATGA...CTCACACCACCATCCCAGGCTCTGCAATCTATCTTGGCGTATCTTGATTACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
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| 3UTR CAA 72 bp | GTAGAGTTCTCTGTAATCAAGATACGCCAAGATAGATaGCAGAGCCTGGGATGGTGGTGTGAGCCTGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: VEFSVIKIRQDR*QSLGWWCEPGI Trigger: AATCCCAGGCTCACACCACCATCCCAGGCTCTGCAATCTATCTTGGCGTATCTTGATTACAGAGAACTCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
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| 3UTR CAA 72 bp | AAGTCAGCCTCTGCCTCTTTTGAGAAACTTTCCAATTaGGAAAATGGGCTGGACAGATGTGCTGTGGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KSASASFEKLSN*ENGLDRCAVGQ Trigger: TTGGCCCACAGCACATCTGTCCAGCCCATTTTCCAAATTGGAAAGTTTCTCAAAAGAGGCAGAGGCTGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
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| CDS-3UTR TCA 90 bp | AATGGAGGTTGGATGAAATGTTGGATTATAGATGAAGGATGGGTGGACAAATGGCAACATCACACGCTTTaGAGGATACGATGGTGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: NGGWMKCWIIDEGWVDKWQHHTL*RIRWCR Trigger: TCGACACCATCGTATCCTTCAAAGCGTGTGATGTTG...CCATTTGTCCACCCATCCTTCATCTATAATCCAACATTTCATCCAACCTCCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
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| CDS-3UTR CAA 90 bp | TCTGGGGTCTCAGCTATGGGTGCCCTAGAGGCTCCTCGGGCAGCTGTCATACACCCCACCTCGGGGTTCTaGAGCAGCACGCTGAGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: SGVSAMGALEAPRAAVIHPTSGF*SSTLSP Trigger: CGGGCTCAGCGTGCTGCTCAAGAACCCCGAGGTGGG...GTGTATGACAGCTGCCCGAGGAGCCTCTAGGGCACCCATAGCTGAGACCCCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000172747.8 |
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| CDS-3UTR CAA 90 bp | GAGGTGACCATACCGTCTTCTGGGGTCTCAGCTATGGGTGCCCTAGAGGCTCCTCCCACCTCGGGGTTCTaGAGCAGCACGCTGAGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: EVTIPSSGVSAMGALEAPPTSGF*SSTLSP Trigger: CGGGCTCAGCGTGCTGCTCAAGAACCCCGAGGTGGG...AGGAGCCTCTAGGGCACCCATAGCTGAGACCCCAGAAGACGGTATGGTCACCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000172747.8 |
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| CDS CCA 90 bp | CAGCTGGGGAGGAGGGGCTCTCGCTCTGAGGCAGCAGCAGTCTCATaGCTTCTGTACACCAGGAACTGGATGGAGATGATGGTGTCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: QLGRRGSRSEAAAVS*LLYTRNWMEMMVSS Trigger: GCTCGACACCATCATCTCCATCCAGTTCCTGGTGTACAGAAGCCATGAGACTGCTGCTGCCTCAGAGCGAGAGCCCCTCCTCCCCAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053862.12 ENSMUST00000139840.9 ENSMUST00000172747.8 |
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| CDS CCA 90 bp | GATGACAAAGCCGATGACCTCCTTCTTTGTGAAGGGCTTATTGCCTaGCTCCACAGACAGGAGTGTCCGCCCCCGGAAGCCTTCCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: DDKADDLLLCEGLIA*LHRQECPPPEAFPG Trigger: CCCAGGGAAGGCTTCCGGGGGCGGACACTCCTGTCTGTGGAGCCAGGCAATAAGCCCTTCACAAAGAAGGAGGTCATCGGCTTTGTCATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000172747.8 |
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| CDS-3UTR CAA 90 bp | ATGTTTCCCCTCCAGCAAATGTTGTCTTTCCGCAGCAGCTTCACTGCACAGCTCCCCACCTCGGGGTTCTaGAGCAGCACGCTGAGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: MFPLQQMLSFRSSFTAQLPTSGF*SSTLSP Trigger: CGGGCTCAGCGTGCTGCTCAAGAACCCCGAGGTGGG...GAGCTGTGCAGTGAAGCTGCTGCGGAAAGACAACATTTGCTGGAGGGGAAACAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
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| CDS TCA 90 bp | CCCCAGCATCACCAGTGCGAACAGCGAGTAGGAGATGCCTTGGGTTaGCTGCCGTATGAAATTGGTGCGAATCTGAGGCAGCCTCGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PQHHQCEQRVGDALG*LPYEIGANLRQPRE Trigger: CTCTCGAGGCTGCCTCAGATTCGCACCAATTTCATACGGCAGTCAACCCAAGGCATCTCCTACTCGCTGTTCGCACTGGTGATGCTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000172747.8 |
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| CDS CCA 90 bp | TCCCAGCCATCCTGGGCACATTCACCAAACACATCCCAGATCCACTaGACAGAGCCATTGGGACAGGTGGAAAAGTTGCTGGCGCCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SQPSWAHSPNTSQIH*TEPLGQVEKLLAPS Trigger: ACTGGGCGCCAGCAACTTTTCCACCTGTCCCAATGGCTCTGTCCAGTGGATCTGGGATGTGTTTGGTGAATGTGCCCAGGATGGCTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000141007.2 ENSMUST00000172747.8 |
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| CDS CCA 90 bp | GAATCTCCACCGATCCAGCCCAGCAGGAACCACAGTGATAGGGCCTaGTCCATGTTGCCTGTCTTGCAGGCTTTGATGTACTGGGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ESPPIQPSRNHSDRA*SMLPVLQALMYWGK Trigger: CTTCCCCCAGTACATCAAAGCCTGCAAGACAGGCAACATGGACCAGGCCCTATCACTGTGGTTCCTGCTGGGCTGGATCGGTGGAGATTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000172747.8 |
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| CDS-3UTR CAA 90 bp | TTCTGGGGTCTCAGCTATGGGTGCCCTAGAGGCTCCTCGGGCAGCTGTCATACATCCATGTTGCCTGTCTaGCAGGCTTTGATGTACTGG | + |
|
Preference number: 5 (lower is better) Translates to: FWGLSYGCPRGSSGSCHTSMLPV*QALMYW Trigger: CCAGTACATCAAAGCCTGCAAGACAGGCAACATGGA...TGTATGACAGCTGCCCGAGGAGCCTCTAGGGCACCCATAGCTGAGACCCCAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000172747.8 |
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| CDS-3UTR CAA 90 bp | CTCTGCCCACACCTCATCCTTCCTGGTTTGGCAGCTGAGGTTCCCATCATCCAGTTTGTGAAGGGCTTATaGCCTGGCTCCACAGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: LCPHLILPGLAAEVPIIQFVKGL*PGSTDR Trigger: CCTGTCTGTGGAGCCAGGCAATAAGCCCTTCACAAA...CTGGATGATGGGAACCTCAGCTGCCAAACCAGGAAGGATGAGGTGTGGGCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000172747.8 |
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| CDS-3UTR CAA 90 bp | CAGTATCTCTGCCCACACCTCATCCTTCCTGGTTTGGCAGCTGAGGTTCCCATCCCAACATCACACGCTTaGAAGGATACGATGGTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: QYLCPHLILPGLAAEVPIPTSHA*KDTMVS Trigger: CGACACCATCGTATCCTTCAAAGCGTGTGATGTTGG...GATGGGAACCTCAGCTGCCAAACCAGGAAGGATGAGGTGTGGGCAGAGATACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
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| CDS-3UTR CAA 90 bp | ATGGATGGGGATGGACAGGTAAATGGAGGTTGGATGAAATGTTGGATTATAGATCCCACCTCGGGGTTCTaGAGCAGCACGCTGAGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: MDGDGQVNGGWMKCWIIDPTSGF*SSTLSP Trigger: CGGGCTCAGCGTGCTGCTCAAGAACCCCGAGGTGGG...ATCTATAATCCAACATTTCATCCAACCTCCATTTACCTGTCCATCCCCATCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
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| CDS-3UTR CAA 90 bp | AGAAGAGGAGTGAAGCCCACACAAGCTTGTCTCCATGACTCAGCTCTCGTTTCCTCCATGTTGCCTGTCTaGCAGGCTTTGATGTACTGG | + |
|
Preference number: 5 (lower is better) Translates to: RRGVKPTQACLHDSALVSSMLPV*QALMYW Trigger: CCAGTACATCAAAGCCTGCAAGACAGGCAACATGGA...GGAAACGAGAGCTGAGTCATGGAGACAAGCTTGTGTGGGCTTCACTCCTCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
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| CDS-3UTR CAA 90 bp | GAGTACAGTCAGATTGAGGTAGGTAGATGGGAGGTGACCATACCGTCTTCTGGGTCCATGTTGCCTGTCTaGCAGGCTTTGATGTACTGG | + |
|
Preference number: 5 (lower is better) Translates to: EYSQIEVGRWEVTIPSSGSMLPV*QALMYW Trigger: CCAGTACATCAAAGCCTGCAAGACAGGCAACATGGA...CCCAGAAGACGGTATGGTCACCTCCCATCTACCTACCTCAATCTGACTGTACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000172747.8 |
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| CDS-3UTR CAA 90 bp | GTAGAGTTCTCTGTAATCAAGATACGCCAAGATAGATTGCAGAGCCTGGGATGGTCCATGTTGCCTGTCTaGCAGGCTTTGATGTACTGG | + |
|
Preference number: 5 (lower is better) Translates to: VEFSVIKIRQDRLQSLGWSMLPV*QALMYW Trigger: CCAGTACATCAAAGCCTGCAAGACAGGCAACATGGA...CCATCCCAGGCTCTGCAATCTATCTTGGCGTATCTTGATTACAGAGAACTCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139840.9 |
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| CDS TCA 72 bp | GTAGACAGAGGGGTGGGCTGGCAGGGATGTGCACACTaGAGCAGAGGCCGTCTTGCCCACACAACGGTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: VDRGVGWQGCAH*SRGRLAHTTVP Trigger: TGGCACCGTTGTGTGGGCAAGACGGCCTCTGCTTCAGTGTGCACATCCCTGCCAGCCCACCCCTCTGTCTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
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| CDS CCA 72 bp | GCCGATGACCTCCTTCTTTGTGAAGGGCTTATTGCCTaGCTCCACAGACAGGAGTGTCCGCCCCCGGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: ADDLLLCEGLIA*LHRQECPPPEA Trigger: GGCTTCCGGGGGCGGACACTCCTGTCTGTGGAGCCAGGCAATAAGCCCTTCACAAAGAAGGAGGTCATCGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000172747.8 |
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| CDS CAA 90 bp | CCCAGCAGGAACCACAGTGATAGGGCCTGGTCCATGTTGCCTGTCTaGCAGGCTTTGATGTACTGGGGGAAGGTAGACGCAGCGAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PSRNHSDRAWSMLPV*QALMYWGKVDAAKQ Trigger: CTGCTTCGCTGCGTCTACCTTCCCCCAGTACATCAAAGCCTGCAAGACAGGCAACATGGACCAGGCCCTATCACTGTGGTTCCTGCTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000172747.8 |
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| CDS CCA 72 bp | CATCCCAGATCCACTGGACAGAGCCATTGGGACAGGTaGAAAAGTTGCTGGCGCCCAGTGTCCTCCAGACCA | + |
|
Preference number: 6 (lower is better) Translates to: HPRSTGQSHWDR*KSCWRPVSSRP Trigger: TGGTCTGGAGGACACTGGGCGCCAGCAACTTTTCCACCTGTCCCAATGGCTCTGTCCAGTGGATCTGGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000141007.2 ENSMUST00000172747.8 |
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| CDS CAA 72 bp | ACAAAGCCGATGACCTCCTTCTTTGTGAAGGGCTTATaGCCTGGCTCCACAGACAGGAGTGTCCGCCCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: TKPMTSFFVKGL*PGSTDRSVRPR Trigger: CCGGGGGCGGACACTCCTGTCTGTGGAGCCAGGCAATAAGCCCTTCACAAAGAAGGAGGTCATCGGCTTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000172747.8 |
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| CDS CAA 72 bp | CGTCTTGCCCACACAACGGTGCCAACATCACACGCTTaGAAGGATACGATGGTGTCGAGCAGCAGCACCCCC | + |
|
Preference number: 6 (lower is better) Translates to: RLAHTTVPTSHA*KDTMVSSSSTP Trigger: GGGGGTGCTGCTGCTCGACACCATCGTATCCTTCAAAGCGTGTGATGTTGGCACCGTTGTGTGGGCAAGACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
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| CDS CAA 90 bp | TGGGCACATTCACCAAACACATCCCAGATCCACTGGACAGAGCCATaGGGACAGGTGGAAAAGTTGCTGGCGCCCAGTGTCCTCCAGACC | + |
|
Preference number: 6 (lower is better) Translates to: WAHSPNTSQIHWTEP*GQVEKLLAPSVLQT Trigger: GGTCTGGAGGACACTGGGCGCCAGCAACTTTTCCACCTGTCCCAATGGCTCTGTCCAGTGGATCTGGGATGTGTTTGGTGAATGTGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000141007.2 ENSMUST00000172747.8 |
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| CDS TCA 72 bp | GTCTTGCCCACACAACGGTGCCAACATCACACGCTTTaGAGGATACGATGGTGTCGAGCAGCAGCACCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: VLPTQRCQHHTL*RIRWCRAAAPP Trigger: TGGGGGTGCTGCTGCTCGACACCATCGTATCCTTCAAAGCGTGTGATGTTGGCACCGTTGTGTGGGCAAGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105801.9 |
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| CDS CCA 72 bp | AGGAGGGGCTCTCGCTCTGAGGCAGCAGCAGTCTCATaGCTTCTGTACACCAGGAACTGGATGGAGATGATG | + |
|
Preference number: 6 (lower is better) Translates to: RRGSRSEAAAVS*LLYTRNWMEMM Trigger: CATCATCTCCATCCAGTTCCTGGTGTACAGAAGCCATGAGACTGCTGCTGCCTCAGAGCGAGAGCCCCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053862.12 ENSMUST00000139840.9 ENSMUST00000172747.8 |
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| CDS TCA 72 bp | CACCAGTGCGAACAGCGAGTAGGAGATGCCTTGGGTTaGCTGCCGTATGAAATTGGTGCGAATCTGAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: HQCEQRVGDALG*LPYEIGANLRQ Trigger: CTGCCTCAGATTCGCACCAATTTCATACGGCAGTCAACCCAAGGCATCTCCTACTCGCTGTTCGCACTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000172747.8 |
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| CDS CCA 72 bp | TCCTGGGCACATTCACCAAACACATCCCAGATCCACTaGACAGAGCCATTGGGACAGGTGGAAAAGTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SWAHSPNTSQIH*TEPLGQVEKLL Trigger: CAGCAACTTTTCCACCTGTCCCAATGGCTCTGTCCAGTGGATCTGGGATGTGTTTGGTGAATGTGCCCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053862.12 ENSMUST00000105801.9 ENSMUST00000139840.9 ENSMUST00000141007.2 ENSMUST00000172747.8 |
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