Pregenerated sensors for SLC5A8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020062Ensembl transcript IDs: ENSMUST00000020255.8
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAAGTAAAGTCCACAGAAGTGCTCTACTCCTCCTCCTGTCCCTGCTaGCTAGAAACAGGATATTCAGGGGGAGGAAAGAAATCTCTTTCC | + |
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Preference number: 1 (lower is better) Translates to: EVKSTEVLYSSSCPC*LETGYSGGGKKSLS Trigger: GGAAAGAGATTTCTTTCCTCCCCCTGAATATCCTGTTTCTAGGCAGCAGGGACAGGAGGAGGAGTAGAGCACTTCTGTGGACTTTACTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| 3UTR GCA 90 bp | CCAGAAGTAAAGTCCACAGAAGTGCTCTACTCCTCCTCCTGTCCCTaGTGCCTAGAAACAGGATATTCAGGGGGAGGAAAGAAATCTCTT | + |
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Preference number: 1 (lower is better) Translates to: PEVKSTEVLYSSSCP*CLETGYSGGGKKSL Trigger: AAGAGATTTCTTTCCTCCCCCTGAATATCCTGTTTCTAGGCAGCAGGGACAGGAGGAGGAGTAGAGCACTTCTGTGGACTTTACTTCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| 3UTR CCA 90 bp | GCTATTTACCCATTCAGAGGCAGACTCAGAGGCAAGGTTATAGCATaGGCTGATCCAGAAGTAAAGTCCACAGAAGTGCTCTACTCCTCC | + |
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Preference number: 1 (lower is better) Translates to: AIYPFRGRLRGKVIA*ADPEVKSTEVLYSS Trigger: GGAGGAGTAGAGCACTTCTGTGGACTTTACTTCTGGATCAGCCCATGCTATAACCTTGCCTCTGAGTCTGCCTCTGAATGGGTAAATAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| 3UTR TCA 90 bp | GCATGTGTTAGCACAGGATGGGATCTGGGGACTGAAGGAAAGAGGTaGCATAGTTTATATTGGATGTCTCAAGACATATCTAAACCCAGG | + |
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Preference number: 1 (lower is better) Translates to: ACVSTGWDLGTEGKR*HSLYWMSQDISKPR Trigger: CCTGGGTTTAGATATGTCTTGAGACATCCAATATAAACTATGTCACCTCTTTCCTTCAGTCCCCAGATCCCATCCTGTGCTAACACATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| 3UTR CCA 90 bp | ATCCTAATGTGGGGCCATATTAGAAACCACGTAAAGGAGCTGAGCTaGCCAAAGACTGGTCTAAATAATTACCCACGACTTGTGAAAATG | + |
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Preference number: 1 (lower is better) Translates to: ILMWGHIRNHVKELS*PKTGLNNYPRLVKM Trigger: CATTTTCACAAGTCGTGGGTAATTATTTAGACCAGTCTTTGGCCAGCTCAGCTCCTTTACGTGGTTTCTAATATGGCCCCACATTAGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| 3UTR GCA 90 bp | GAATATGCCTTTGATTATCAAGAACCATGTGTGTATGTCTGTATTTaGCTTTCACACATGTATGTAGTTATAAACATCCACAACCAGAGC | + |
|
Preference number: 1 (lower is better) Translates to: EYAFDYQEPCVYVCI*LSHMYVVINIHNQS Trigger: GCTCTGGTTGTGGATGTTTATAACTACATACATGTGTGAAAGGCAAATACAGACATACACACATGGTTCTTGATAATCAAAGGCATATTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| 3UTR TCA 90 bp | GAAACTCCTAACTCCAGGATAGCATCAATCAACCAGTGTATAAAGTaGGCCAAATCGGGATTTGGCTTTAATAAAATATATCTTCCAAAA | + |
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Preference number: 1 (lower is better) Translates to: ETPNSRIASINQCIK*AKSGFGFNKIYLPK Trigger: TTTTGGAAGATATATTTTATTAAAGCCAAATCCCGATTTGGCTCACTTTATACACTGGTTGATTGATGCTATCCTGGAGTTAGGAGTTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| 3UTR CCA 90 bp | TTAGTAATTCAACTTAACAGCATTAAAAGCAATTGTGCGACTCCATaGGACTTCACCGTTTTCAAATATTTAATGTTCTTGGGTTACCCA | + |
|
Preference number: 1 (lower is better) Translates to: LVIQLNSIKSNCATP*DFTVFKYLMFLGYP Trigger: TGGGTAACCCAAGAACATTAAATATTTGAAAACGGTGAAGTCCCATGGAGTCGCACAATTGCTTTTAATGCTGTTAAGTTGAATTACTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| 3UTR-3UTR GCA 90 bp | GAACCGCAGCCCTTTACCTTGGTTGCCTCCTTATCAACAATCTTCATGGGAAGATCCTCCTCCTGTCCCTaGTGCCTAGAAACAGGATAT | + |
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Preference number: 2 (lower is better) Translates to: EPQPFTLVASLSTIFMGRSSSCP*CLETGY Trigger: ATATCCTGTTTCTAGGCAGCAGGGACAGGAGGAGGA...TCTTCCCATGAAGATTGTTGATAAGGAGGCAACCAAGGTAAAGGGCTGCGGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| 3UTR CAA 90 bp | AGCTCAGTAAGAGTTTTACCGCTGAACCGCAGCCCTTTACCTTGGTaGCCTCCTTATCAACAATCTTCATGGGAAGATTCAGAGGGAATC | + |
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Preference number: 2 (lower is better) Translates to: SSVRVLPLNRSPLPW*PPYQQSSWEDSEGI Trigger: GATTCCCTCTGAATCTTCCCATGAAGATTGTTGATAAGGAGGCAACCAAGGTAAAGGGCTGCGGTTCAGCGGTAAAACTCTTACTGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| 3UTR-3UTR TCA 90 bp | CCCTTTACCTTGGTTGCCTCCTTATCAACAATCTTCATGGGAAGATTCAGAGGGAACCAGTGTATAAAGTaGGCCAAATCGGGATTTGGC | + |
|
Preference number: 2 (lower is better) Translates to: PFTLVASLSTIFMGRFRGNQCIK*AKSGFG Trigger: GCCAAATCCCGATTTGGCTCACTTTATACACTGGTT...CCCTCTGAATCTTCCCATGAAGATTGTTGATAAGGAGGCAACCAAGGTAAAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| 3UTR-3UTR CCA 90 bp | CCCTTTACCTTGGTTGCCTCCTTATCAACAATCTTCATGGGAAGATTCAGAGGGGGCAAGGTTATAGCATaGGCTGATCCAGAAGTAAAG | + |
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Preference number: 2 (lower is better) Translates to: PFTLVASLSTIFMGRFRGGKVIA*ADPEVK Trigger: CTTTACTTCTGGATCAGCCCATGCTATAACCTTGCC...CCCTCTGAATCTTCCCATGAAGATTGTTGATAAGGAGGCAACCAAGGTAAAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| 3UTR-3UTR TCA 90 bp | AACAATCTTCATGGGAAGATTCAGAGGGAATCAGTTCACAGAGTTCTTCAGTGTACCAGAGAAACACAATaGCCCATGCTGGTAACTACT | + |
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Preference number: 2 (lower is better) Translates to: NNLHGKIQRESVHRVLQCTRETQ*PMLVTT Trigger: AGTAGTTACCAGCATGGGTCATTGTGTTTCTCTGGT...ACACTGAAGAACTCTGTGAACTGATTCCCTCTGAATCTTCCCATGAAGATTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| 3UTR CAA 90 bp | TGGTATTTCCAAATCTCACAAGGATATACTTTGTCTTACAGGAAGTaGACAAACTCGTTTGGAATACCACTTCTCATGAAGAACACGTTG | + |
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Preference number: 2 (lower is better) Translates to: WYFQISQGYTLSYRK*TNSFGIPLLMKNTL Trigger: CAACGTGTTCTTCATGAGAAGTGGTATTCCAAACGAGTTTGTCAACTTCCTGTAAGACAAAGTATATCCTTGTGAGATTTGGAAATACCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| 3UTR-3UTR TCA 90 bp | CTAGCAAATAATATTTGCCTCAAATCACTTGAGTTAATGAAATCCTGGTCTGTCTGTCTTACAGGAAGTTaGCAAACTCGTTTGGAATAC | + |
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Preference number: 2 (lower is better) Translates to: LANNICLKSLELMKSWSVCLTGS*QTRLEY Trigger: GTATTCCAAACGAGTTTGTCAACTTCCTGTAAGACA...GACAGACCAGGATTTCATTAACTCAAGTGATTTGAGGCAAATATTATTTGCTAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| 3UTR-3UTR TCA 90 bp | CTAGCAAATAATATTTGCCTCAAATCACTTGAGTTAATGAAATCCTGGTCTGTCATAGTCAATAGTCTATaGAAAGCACTGTACTTGGCA | + |
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Preference number: 2 (lower is better) Translates to: LANNICLKSLELMKSWSVIVNSL*KALYLA Trigger: TGCCAAGTACAGTGCTTTTCATAGACTATTGACTAT...GACAGACCAGGATTTCATTAACTCAAGTGATTTGAGGCAAATATTATTTGCTAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| 3UTR-3UTR CCA 90 bp | CTAGCAAATAATATTTGCCTCAAATCACTTGAGTTAATGAAATCCTGGTCTGTCGTTGACAAACTCGTTTaGAATACCACTTCTCATGAA | + |
|
Preference number: 2 (lower is better) Translates to: LANNICLKSLELMKSWSVVDKLV*NTTSHE Trigger: TTCATGAGAAGTGGTATTCCAAACGAGTTTGTCAAC...GACAGACCAGGATTTCATTAACTCAAGTGATTTGAGGCAAATATTATTTGCTAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| 3UTR-3UTR GCA 90 bp | ATAGTTTATATTGGATGTCTCAAGACATATCTAAACCCAGGGCAAAAAGCAAGAGTGTATGTCTGTATTTaGCTTTCACACATGTATGTA | + |
|
Preference number: 2 (lower is better) Translates to: IVYIGCLKTYLNPGQKARVYVCI*LSHMYV Trigger: TACATACATGTGTGAAAGGCAAATACAGACATACAC...TCTTGCTTTTTGCCCTGGGTTTAGATATGTCTTGAGACATCCAATATAAACTAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| 3UTR TCA 72 bp | CTAAACGGACATGCACTAGGTTGCCCCCGTTCTCAGTaGTGCTGGGAAGGAAGCCTAGGATCTTGCACAAGC | + |
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Preference number: 3 (lower is better) Translates to: LNGHALGCPRSQ*CWEGSLGSCTS Trigger: GCTTGTGCAAGATCCTAGGCTTCCTTCCCAGCATCACTGAGAACGGGGGCAACCTAGTGCATGTCCGTTTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| 3UTR GCA 72 bp | AAGTCCACAGAAGTGCTCTACTCCTCCTCCTGTCCCTaGTGCCTAGAAACAGGATATTCAGGGGGAGGAAAG | + |
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Preference number: 3 (lower is better) Translates to: KSTEVLYSSSCP*CLETGYSGGGK Trigger: CTTTCCTCCCCCTGAATATCCTGTTTCTAGGCAGCAGGGACAGGAGGAGGAGTAGAGCACTTCTGTGGACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| 3UTR CCA 72 bp | CCATTCAGAGGCAGACTCAGAGGCAAGGTTATAGCATaGGCTGATCCAGAAGTAAAGTCCACAGAAGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: PFRGRLRGKVIA*ADPEVKSTEVL Trigger: GAGCACTTCTGTGGACTTTACTTCTGGATCAGCCCATGCTATAACCTTGCCTCTGAGTCTGCCTCTGAATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| 3UTR-3UTR CAA 90 bp | GAACCGCAGCCCTTTACCTTGGTTGCCTCCTTATCAACAATCTTCATGGGAAGAGCATTAAAGATGAACTaGATCGTTGGGTACCTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: EPQPFTLVASLSTIFMGRALKMN*IVGYLV Trigger: CACTAGGTACCCAACGATCAAGTTCATCTTTAATGC...TCTTCCCATGAAGATTGTTGATAAGGAGGCAACCAAGGTAAAGGGCTGCGGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| 3UTR CCA 72 bp | TGGGGCCATATTAGAAACCACGTAAAGGAGCTGAGCTaGCCAAAGACTGGTCTAAATAATTACCCACGACTT | + |
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Preference number: 3 (lower is better) Translates to: WGHIRNHVKELS*PKTGLNNYPRL Trigger: AAGTCGTGGGTAATTATTTAGACCAGTCTTTGGCCAGCTCAGCTCCTTTACGTGGTTTCTAATATGGCCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| 3UTR-3UTR CAA 90 bp | AACAATCTTCATGGGAAGATTCAGAGGGAATCAGTTCACAGAGTTCTTCAGTGTCAACCAGAGCTCGTGTaGAAACTCCTAACTCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: NNLHGKIQRESVHRVLQCQPELV*KLLTPG Trigger: TCCTGGAGTTAGGAGTTTCAACACGAGCTCTGGTTG...ACACTGAAGAACTCTGTGAACTGATTCCCTCTGAATCTTCCCATGAAGATTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| 3UTR-3UTR CAA 90 bp | AACAATCTTCATGGGAAGATTCAGAGGGAATCAGTTCACAGAGTTCTTCAGTGTGCACCAGCAATCTCATaGGGGACACTTAAATGTCTC | + |
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Preference number: 3 (lower is better) Translates to: NNLHGKIQRESVHRVLQCAPAIS*GTLKCL Trigger: GAGACATTTAAGTGTCCCCAATGAGATTGCTGGTGC...ACACTGAAGAACTCTGTGAACTGATTCCCTCTGAATCTTCCCATGAAGATTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| 3UTR CCA 72 bp | CCTTTACCTTGGTTGCCTCCTTATCAACAATCTTCATaGGAAGATTCAGAGGGAATCAGTTCACAGAGTTCT | + |
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Preference number: 3 (lower is better) Translates to: PLPWLPPYQQSS*EDSEGISSQSS Trigger: AGAACTCTGTGAACTGATTCCCTCTGAATCTTCCCATGAAGATTGTTGATAAGGAGGCAACCAAGGTAAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| 3UTR-3UTR CAA 90 bp | CCCTTTACCTTGGTTGCCTCCTTATCAACAATCTTCATGGGAAGATTCAGAGGGTTGTCTTACAGGAAGTaGACAAACTCGTTTGGAATA | + |
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Preference number: 3 (lower is better) Translates to: PFTLVASLSTIFMGRFRGLSYRK*TNSFGI Trigger: TATTCCAAACGAGTTTGTCAACTTCCTGTAAGACAA...CCCTCTGAATCTTCCCATGAAGATTGTTGATAAGGAGGCAACCAAGGTAAAGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| 3UTR-3UTR CAA 90 bp | TGGGGACTGAAGGAAAGAGGTGACATAGTTTATATTGGATGTCTCAAGACATATTGTGTATGTCTGTATTaGCCTTTCACACATGTATGT | + |
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Preference number: 3 (lower is better) Translates to: WGLKERGDIVYIGCLKTYCVCLY*PFTHVC Trigger: ACATACATGTGTGAAAGGCAAATACAGACATACACA...ATATGTCTTGAGACATCCAATATAAACTATGTCACCTCTTTCCTTCAGTCCCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| 3UTR-3UTR CAA 90 bp | ATAGTTTATATTGGATGTCTCAAGACATATCTAAACCCAGGGCAAAAAGCAAGACGTAAGAATATGCCTTaGATTATCAAGAACCATGTG | + |
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Preference number: 3 (lower is better) Translates to: IVYIGCLKTYLNPGQKARRKNMP*IIKNHV Trigger: CACATGGTTCTTGATAATCAAAGGCATATTCTTACG...TCTTGCTTTTTGCCCTGGGTTTAGATATGTCTTGAGACATCCAATATAAACTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| 3UTR TCA 72 bp | AAAGAGAGCATGCAAACAATCCACTTACTGATAACATaGCTCTGTGATGTTTTACACCTGACCTATAAAGTT | + |
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Preference number: 3 (lower is better) Translates to: KESMQTIHLLIT*LCDVLHLTYKV Trigger: AACTTTATAGGTCAGGTGTAAAACATCACAGAGTCATGTTATCAGTAAGTGGATTGTTTGCATGCTCTCTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| 3UTR CCA 72 bp | CAACTTAACAGCATTAAAAGCAATTGTGCGACTCCATaGGACTTCACCGTTTTCAAATATTTAATGTTCTTG | + |
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Preference number: 3 (lower is better) Translates to: QLNSIKSNCATP*DFTVFKYLMFL Trigger: CAAGAACATTAAATATTTGAAAACGGTGAAGTCCCATGGAGTCGCACAATTGCTTTTAATGCTGTTAAGTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| 3UTR TCA 72 bp | AACTCCAGGATAGCATCAATCAACCAGTGTATAAAGTaGGCCAAATCGGGATTTGGCTTTAATAAAATATAT | + |
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Preference number: 3 (lower is better) Translates to: NSRIASINQCIK*AKSGFGFNKIY Trigger: ATATATTTTATTAAAGCCAAATCCCGATTTGGCTCACTTTATACACTGGTTGATTGATGCTATCCTGGAGTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| 3UTR CCA 72 bp | AATATTTGCCTCAAATCACTTGAGTTAATGAAATCCTaGTCTGTCAAAACTCAGGTCTTTCACACTACTTTT | + |
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Preference number: 3 (lower is better) Translates to: NICLKSLELMKS*SVKTQVFHTTF Trigger: AAAAGTAGTGTGAAAGACCTGAGTTTTGACAGACCAGGATTTCATTAACTCAAGTGATTTGAGGCAAATATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| CDS-3UTR GCA 90 bp | GAACCGCAGCCCTTTACCTTGGTTGCCTCCTTATCAACAATCTTCATGGGAAGAGTGTGCAGTAGAATGTaGAGACCACCCCTGTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: EPQPFTLVASLSTIFMGRVCSRM*RPPLWP Trigger: TGGCCACAGGGGTGGTCTGCACATTCTACTGCACAC...TCTTCCCATGAAGATTGTTGATAAGGAGGCAACCAAGGTAAAGGGCTGCGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| 3UTR CAA 72 bp | CCGTTCTCAGTGATGCTGGGAAGGAAGCCTAGGATCTaGCACAAGCTCAGTAAGAGTTTTACCGCTGAACCG | + |
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Preference number: 4 (lower is better) Translates to: PFSVMLGRKPRI*HKLSKSFTAEP Trigger: CGGTTCAGCGGTAAAACTCTTACTGAGCTTGTGCAAGATCCTAGGCTTCCTTCCCAGCATCACTGAGAACGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| CDS-3UTR GCA 90 bp | CCCTTTACCTTGGTTGCCTCCTTATCAACAATCTTCATGGGAAGATTCAGAGGGGATGAGCAGCATGCCTaGGAACACCACGTAGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: PFTLVASLSTIFMGRFRGDEQHA*EHHVVP Trigger: TGGGACTACGTGGTGTTCGCAGGCATGCTGCTCATC...CCCTCTGAATCTTCCCATGAAGATTGTTGATAAGGAGGCAACCAAGGTAAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| 3UTR CAA 72 bp | AATGCGTTTTTAAGAGCTAAACGGACATGCACTAGGTaGCCCCCGTTCTCAGTGATGCTGGGAAGGAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: NAFLRAKRTCTR*PPFSVMLGRKP Trigger: AGGCTTCCTTCCCAGCATCACTGAGAACGGGGGCAACCTAGTGCATGTCCGTTTAGCTCTTAAAAACGCATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| CDS-3UTR TCA 90 bp | AACAATCTTCATGGGAAGATTCAGAGGGAATCAGTTCACAGAGTTCTTCAGTGTCTGCCGCCAAGGCATTaGTACTGGAGGACACTGTGC | + |
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Preference number: 4 (lower is better) Translates to: NNLHGKIQRESVHRVLQCLPPRH*YWRTLC Trigger: GCACAGTGTCCTCCAGTATCAATGCCTTGGCGGCAG...ACACTGAAGAACTCTGTGAACTGATTCCCTCTGAATCTTCCCATGAAGATTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| CDS-3UTR GCA 90 bp | TGGGGACTGAAGGAAAGAGGTGACATAGTTTATATTGGATGTCTCAAGACATATCCCTGTGGCCACCACTaGGCCCCACAGATCAAATCC | + |
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Preference number: 4 (lower is better) Translates to: WGLKERGDIVYIGCLKTYPCGHH*APQIKS Trigger: GGATTTGATCTGTGGGGCGCAGTGGTGGCCACAGGG...ATATGTCTTGAGACATCCAATATAAACTATGTCACCTCTTTCCTTCAGTCCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| CDS-3UTR GCA 90 bp | AACAATCTTCATGGGAAGATTCAGAGGGAATCAGTTCACAGAGTTCTTCAGTGTGGCTCCCATCAGCGATaGCAGGGCAGCCATTCCAAT | + |
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Preference number: 4 (lower is better) Translates to: NNLHGKIQRESVHRVLQCGSHQR*QGSHSN Trigger: ATTGGAATGGCTGCCCTGGCATCGCTGATGGGAGCC...ACACTGAAGAACTCTGTGAACTGATTCCCTCTGAATCTTCCCATGAAGATTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| CDS-3UTR GCA 90 bp | CCCTTTACCTTGGTTGCCTCCTTATCAACAATCTTCATGGGAAGATTCAGAGGGATCTGTCCAGACAACTaGTTTAAGACCGCCCAGTGT | + |
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Preference number: 4 (lower is better) Translates to: PFTLVASLSTIFMGRFRGICPDN*FKTAQC Trigger: ACACTGGGCGGTCTTAAAGCAGTTGTCTGGACAGAT...CCCTCTGAATCTTCCCATGAAGATTGTTGATAAGGAGGCAACCAAGGTAAAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| CDS-3UTR CCA 90 bp | AACAATCTTCATGGGAAGATTCAGAGGGAATCAGTTCACAGAGTTCTTCAGTGTGTGCTCCAATCGAGTTaGCGAAGGGGACCAAGATGC | + |
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Preference number: 4 (lower is better) Translates to: NNLHGKIQRESVHRVLQCVLQSS*RRGPRC Trigger: GCATCTTGGTCCCCTTCGCCAACTCGATTGGAGCAC...ACACTGAAGAACTCTGTGAACTGATTCCCTCTGAATCTTCCCATGAAGATTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| CDS-3UTR TCA 90 bp | AAAAGCAAGAAGCTGGAACAGTTAAGTCCAGGTAACATGCTCTACAAAAGCAAGACTCGTAGGTGCTGGTaGTCCCCAGCCTATAGAACA | + |
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Preference number: 4 (lower is better) Translates to: KSKKLEQLSPGNMLYKSKTRRCW*SPAYRT Trigger: TGTTCTATAGGCTGGGGATCACCAGCACCTACGAGT...CTTGCTTTTGTAGAGCATGTTACCTGGACTTAACTGTTCCAGCTTCTTGCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| CDS-3UTR TCA 90 bp | CCCTTTACCTTGGTTGCCTCCTTATCAACAATCTTCATGGGAAGATTCAGAGGGAAGCTGGTCAATCGCTaGCACTTTCTTAGATGTCCA | + |
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Preference number: 4 (lower is better) Translates to: PFTLVASLSTIFMGRFRGKLVNR*HFLRCP Trigger: TGGACATCTAAGAAAGTGTCAGCGATTGACCAGCTT...CCCTCTGAATCTTCCCATGAAGATTGTTGATAAGGAGGCAACCAAGGTAAAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| CDS-3UTR CCA 90 bp | AACAATCTTCATGGGAAGATTCAGAGGGAATCAGTTCACAGAGTTCTTCAGTGTCAGCCTATAGAACACTaGAAGGAAGACCTCCGCGCT | + |
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Preference number: 4 (lower is better) Translates to: NNLHGKIQRESVHRVLQCQPIEH*KEDLRA Trigger: AGCGCGGAGGTCTTCCTTCCAGTGTTCTATAGGCTG...ACACTGAAGAACTCTGTGAACTGATTCCCTCTGAATCTTCCCATGAAGATTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| 3UTR CAA 72 bp | CTGAACCTAATTCCATACATGGCACCAGCAATCTCATaGGGGACACTTAAATGTCTCCACATGTCACCAGAG | + |
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Preference number: 4 (lower is better) Translates to: LNLIPYMAPAIS*GTLKCLHMSPE Trigger: CTCTGGTGACATGTGGAGACATTTAAGTGTCCCCAATGAGATTGCTGGTGCCATGTATGGAATTAGGTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| 3UTR CAA 72 bp | AGAGTTTTACCGCTGAACCGCAGCCCTTTACCTTGGTaGCCTCCTTATCAACAATCTTCATGGGAAGATTCA | + |
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Preference number: 4 (lower is better) Translates to: RVLPLNRSPLPW*PPYQQSSWEDS Trigger: TGAATCTTCCCATGAAGATTGTTGATAAGGAGGCAACCAAGGTAAAGGGCTGCGGTTCAGCGGTAAAACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS-3UTR TCA 90 bp | ATAGTTTATATTGGATGTCTCAAGACATATCTAAACCCAGGGCAAAAAGCAAGAAGAATATGGAGCAGGTaGGGATCACCCAGAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: IVYIGCLKTYLNPGQKARRIWSR*GSPRGP Trigger: TGGGCCTCTGGGTGATCCTCACCTGCTCCATATTCT...TCTTGCTTTTTGCCCTGGGTTTAGATATGTCTTGAGACATCCAATATAAACTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS-3UTR TCA 90 bp | TGGGGACTGAAGGAAAGAGGTGACATAGTTTATATTGGATGTCTCAAGACATATTGGCATTTCTGTGGTTaGCATCCAGTCCGACCCATT | + |
|
Preference number: 4 (lower is better) Translates to: WGLKERGDIVYIGCLKTYWHFCG*HPVRPI Trigger: AATGGGTCGGACTGGATGTCAACCACAGAAATGCCA...ATATGTCTTGAGACATCCAATATAAACTATGTCACCTCTTTCCTTCAGTCCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS-3UTR TCA 90 bp | AACAATCTTCATGGGAAGATTCAGAGGGAATCAGTTCACAGAGTTCTTCAGTGTTGCCACTGTGATCTGTaGAGTTCAGCTCAACATGGT | + |
|
Preference number: 4 (lower is better) Translates to: NNLHGKIQRESVHRVLQCCHCDL*SSAQHG Trigger: ACCATGTTGAGCTGAACTTCACAGATCACAGTGGCA...ACACTGAAGAACTCTGTGAACTGATTCCCTCTGAATCTTCCCATGAAGATTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGACTGAAGGAAAGAGGTGACATAGTTTATATTGGATGTCTCAAGACATATAAACAAGCCCAGAAGTaGTCCACCAACCATGCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: WGLKERGDIVYIGCLKTYKQAQK*STNHAE Trigger: TTCGGCATGGTTGGTGGACCACTTCTGGGCTTGTTT...ATATGTCTTGAGACATCCAATATAAACTATGTCACCTCTTTCCTTCAGTCCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGCAAGAAGCTGGAACAGTTAAGTCCAGGTAACATGCTCTACAAAAGCAAGCTACCCATAAGGAAATaGCAAATCCAGCCAACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: KSKKLEQLSPGNMLYKSKLPIRK*QIQPTD Trigger: GTCTGTTGGCTGGATTTGCCATTTCCTTATGGGTAG...CTTGCTTTTGTAGAGCATGTTACCTGGACTTAACTGTTCCAGCTTCTTGCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGCAAGAAGCTGGAACAGTTAAGTCCAGGTAACATGCTCTACAAAAGCAAGCCAATTGTCCATCAGTaGAGTCCTTTCCGCATTATG | + |
|
Preference number: 4 (lower is better) Translates to: KSKKLEQLSPGNMLYKSKPIVHQ*SPFRIM Trigger: CATAATGCGGAAAGGACTCCACTGATGGACAATTGG...CTTGCTTTTGTAGAGCATGTTACCTGGACTTAACTGTTCCAGCTTCTTGCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| 3UTR CAA 72 bp | AGGAAAAACAGGCACAAGAATGCATTAAAGATGAACTaGATCGTTGGGTACCTAGTGTATCCTAGGCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RKNRHKNALKMN*IVGYLVYPRQD Trigger: ATCCTGCCTAGGATACACTAGGTACCCAACGATCAAGTTCATCTTTAATGCATTCTTGTGCCTGTTTTTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS-3UTR TCA 90 bp | ATAGTTTATATTGGATGTCTCAAGACATATCTAAACCCAGGGCAAAAAGCAAGAACAAGCGAGTCCCATTaGTCTTGCCACTGTGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: IVYIGCLKTYLNPGQKARTSESH*SCHCDL Trigger: CAGATCACAGTGGCAAGATCAATGGGACTCGCTTGT...TCTTGCTTTTTGCCCTGGGTTTAGATATGTCTTGAGACATCCAATATAAACTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS-3UTR GCA 90 bp | TGGGGACTGAAGGAAAGAGGTGACATAGTTTATATTGGATGTCTCAAGACATATCAGGAAATATATCTCTaGACTTGGGACTGGTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: WGLKERGDIVYIGCLKTYQEIYL*TWDWLT Trigger: TGTCAACCAGTCCCAAGTGCAGAGATATATTTCCTG...ATATGTCTTGAGACATCCAATATAAACTATGTCACCTCTTTCCTTCAGTCCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS-3UTR TCA 90 bp | CTAGCAAATAATATTTGCCTCAAATCACTTGAGTTAATGAAATCCTGGTCTGTCTCAAATCCTGTAACTTaGTTCAAAGCCAGAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LANNICLKSLELMKSWSVSNPVT*FKARAG Trigger: CCCTGCTCTGGCTTTGAATCAAGTTACAGGATTTGA...GACAGACCAGGATTTCATTAACTCAAGTGATTTGAGGCAAATATTATTTGCTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS-3UTR TCA 90 bp | CTAGCAAATAATATTTGCCTCAAATCACTTGAGTTAATGAAATCCTGGTCTGTCTTGATCTTGCCACTGTaGTCTGTGAAGTTCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LANNICLKSLELMKSWSVLILPL*SVKFSS Trigger: TGAGCTGAACTTCACAGATCACAGTGGCAAGATCAA...GACAGACCAGGATTTCATTAACTCAAGTGATTTGAGGCAAATATTATTTGCTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS-3UTR GCA 90 bp | TGGGGACTGAAGGAAAGAGGTGACATAGTTTATATTGGATGTCTCAAGACATATCAGAACGTGTGTCTTTaGAAAGGGTTAGGATCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: WGLKERGDIVYIGCLKTYQNVCL*KGLGSK Trigger: TTTTGATCCTAACCCTTTGCAAAGACACACGTTCTG...ATATGTCTTGAGACATCCAATATAAACTATGTCACCTCTTTCCTTCAGTCCCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS-3UTR GCA 90 bp | CTAGCAAATAATATTTGCCTCAAATCACTTGAGTTAATGAAATCCTGGTCTGTCTACTGGAGGACACTGTaGTTAATGTCCCACTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LANNICLKSLELMKSWSVYWRTL*LMSHCK Trigger: CTTACAGTGGGACATTAAGCACAGTGTCCTCCAGTA...GACAGACCAGGATTTCATTAACTCAAGTGATTTGAGGCAAATATTATTTGCTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS-3UTR CCA 90 bp | CTAGCAAATAATATTTGCCTCAAATCACTTGAGTTAATGAAATCCTGGTCTGTCAAAATGGCATTTCTGTaGTTGACATCCAGTCCGACC | + |
|
Preference number: 4 (lower is better) Translates to: LANNICLKSLELMKSWSVKMAFL*LTSSPT Trigger: GGTCGGACTGGATGTCAACCACAGAAATGCCATTTT...GACAGACCAGGATTTCATTAACTCAAGTGATTTGAGGCAAATATTATTTGCTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| 3UTR CAA 72 bp | CCATGGGACTTCACCGTTTTCAAATATTTAATGTTCTaGGGTTACCCAATACACAAGAAGCATGTGTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PWDFTVFKYLMF*GYPIHKKHVLA Trigger: TGCTAACACATGCTTCTTGTGTATTGGGTAACCCAAGAACATTAAATATTTGAAAACGGTGAAGTCCCATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| 3UTR CAA 72 bp | AACTCGTTTGGAATACCACTTCTCATGAAGAACACGTaGAGTAACCTTTGTGCAGTCAGATCAAAGAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NSFGIPLLMKNT*SNLCAVRSKKK Trigger: CTTTTTCTTTGATCTGACTGCACAAAGGTTACTCAACGTGTTCTTCATGAGAAGTGGTATTCCAAACGAGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS-3UTR TCA 90 bp | ATAGTTTATATTGGATGTCTCAAGACATATCTAAACCCAGGGCAAAAAGCAAGACAAATCCAGCCACCATaGTCCCAACTTGAAAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: IVYIGCLKTYLNPGQKARQIQPP*SQLEKH Trigger: ATGTTTTTCAAGTTGGGATCATGGTGGCTGGATTTG...TCTTGCTTTTTGCCCTGGGTTTAGATATGTCTTGAGACATCCAATATAAACTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS-3UTR GCA 90 bp | ATAGTTTATATTGGATGTCTCAAGACATATCTAAACCCAGGGCAAAAAGCAAGACTGTATAATTACGGATaGAAATCCAGCCACCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: IVYIGCLKTYLNPGQKARLYNYG*KSSHHD Trigger: ATCATGGTGGCTGGATTTGCATCCGTAATTATACAG...TCTTGCTTTTTGCCCTGGGTTTAGATATGTCTTGAGACATCCAATATAAACTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS-3UTR GCA 90 bp | ATAGTTTATATTGGATGTCTCAAGACATATCTAAACCCAGGGCAAAAAGCAAGAATAGAGGGACAGTTTTaGATGGAGTCTGCTTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: IVYIGCLKTYLNPGQKARIEGQF*MESAFT Trigger: TGTAAAAGCAGACTCCATGCAAAACTGTCCCTCTAT...TCTTGCTTTTTGCCCTGGGTTTAGATATGTCTTGAGACATCCAATATAAACTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS-3UTR GCA 90 bp | ATAGTTTATATTGGATGTCTCAAGACATATCTAAACCCAGGGCAAAAAGCAAGAGTTTTGCATGGAGTCTaGTTTTACAGGAAATATATC | + |
|
Preference number: 4 (lower is better) Translates to: IVYIGCLKTYLNPGQKARVLHGV*FYRKYI Trigger: GATATATTTCCTGTAAAAGCAGACTCCATGCAAAAC...TCTTGCTTTTTGCCCTGGGTTTAGATATGTCTTGAGACATCCAATATAAACTAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS GCA 90 bp | GAAGGCGTAATAGATGCCTATAGCCGCCGAGATGAGCAGCATGCCTaGGAACACCACGTAGTCCCACACCACAAAACTGCCGATGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: EGVIDAYSRRDEQHA*EHHVVPHHKTADVP Trigger: CGGGACATCGGCAGTTTTGTGGTGTGGGACTACGTGGTGTTCGCAGGCATGCTGCTCATCTCGGCGGCTATAGGCATCTATTACGCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS GCA 90 bp | CCTGTAACAAGGCTCCCATCAGCGATGCCAGGGCAGCCATTCCAATaGACAGAGCTCCATACAGAACACTCATTCCTTGGGAAATCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: PVTRLPSAMPGQPFQ*TELHTEHSFLGKSK Trigger: CTTGGATTTCCCAAGGAATGAGTGTTCTGTATGGAGCTCTGTGCATTGGAATGGCTGCCCTGGCATCGCTGATGGGAGCCTTGTTACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS TCA 90 bp | GCCTGTATAATTACGGATGCAAATCCAGCCACCATGATCCCAACTTaGAAAACATCTGTCCAGACAACTGCTTTAAGACCGCCCAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ACIITDANPATMIPT*KTSVQTTALRPPSV Trigger: CACACTGGGCGGTCTTAAAGCAGTTGTCTGGACAGATGTTTTTCAAGTTGGGATCATGGTGGCTGGATTTGCATCCGTAATTATACAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS TCA 90 bp | AAAATGGCATTTCTGTGGTTGACATCCAGTCCGACCCATTGTGCGTaGTGTTACAGCCATAGGTTTCAAGGGGCAATGGTAAGGTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KMAFLWLTSSPTHCA*CYSHRFQGAMVRFS Trigger: AGAGAACCTTACCATTGCCCCTTGAAACCTATGGCTGTAACATCACGCACAATGGGTCGGACTGGATGTCAACCACAGAAATGCCATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGCAAGAAGCTGGAACAGTTAAGTCCAGGTAACATGCTCTACAAAAGCAAGACTGCCGCCAAGGCATaGATACTGGAGGACACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: KSKKLEQLSPGNMLYKSKTAAKA*ILEDTV Trigger: CACAGTGTCCTCCAGTATCAATGCCTTGGCGGCAGT...CTTGCTTTTGTAGAGCATGTTACCTGGACTTAACTGTTCCAGCTTCTTGCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS-3UTR CAA 90 bp | GAACCGCAGCCCTTTACCTTGGTTGCCTCCTTATCAACAATCTTCATGGGAAGACAGAACACTCATTCCTaGGGAAATCCAAGACAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: EPQPFTLVASLSTIFMGRQNTHS*GNPRQR Trigger: TCTCTGTCTTGGATTTCCCAAGGAATGAGTGTTCTG...TCTTCCCATGAAGATTGTTGATAAGGAGGCAACCAAGGTAAAGGGCTGCGGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS-3UTR CAA 90 bp | GAACCGCAGCCCTTTACCTTGGTTGCCTCCTTATCAACAATCTTCATGGGAAGATTCAGCTCAACATGGTaGAAGGCAGGGTTATCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: EPQPFTLVASLSTIFMGRFSSTW*KAGLSV Trigger: AACTGATAACCCTGCCTTCAACCATGTTGAGCTGAA...TCTTCCCATGAAGATTGTTGATAAGGAGGCAACCAAGGTAAAGGGCTGCGGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS-3UTR CAA 90 bp | ATAGTTTATATTGGATGTCTCAAGACATATCTAAACCCAGGGCAAAAAGCAAGACCCATAAGAAAGTCCTaGGAGGTCTGCTGGCCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: IVYIGCLKTYLNPGQKARPIRKS*EVCWPP Trigger: GGGCGGCCAGCAGACCTCCAAGGACTTTCTTATGGG...TCTTGCTTTTTGCCCTGGGTTTAGATATGTCTTGAGACATCCAATATAAACTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS TCA 90 bp | TTTCAAAATGTCCAACACCAAATAAGGCATAAGCTGGTCAATCGCTaGCACTTTCTTAGATGTCCAGGGATCACATTCACGGTATCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: FQNVQHQIRHKLVNR*HFLRCPGITFTVSG Trigger: TCCAGATACCGTGAATGTGATCCCTGGACATCTAAGAAAGTGTCAGCGATTGACCAGCTTATGCCTTATTTGGTGTTGGACATTTTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGCAAGAAGCTGGAACAGTTAAGTCCAGGTAACATGCTCTACAAAAGCAAGCCAGAACGTGTGTCTTaGCAAAGGGTTAGGATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: KSKKLEQLSPGNMLYKSKPERVS*QRVRIK Trigger: TTTGATCCTAACCCTTTGCAAAGACACACGTTCTGG...CTTGCTTTTGTAGAGCATGTTACCTGGACTTAACTGTTCCAGCTTCTTGCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS GCA 90 bp | CAGGTAAAAGTCCCTCCAATGACAATTGTCCAGAACGTGTGTCTTTaGAAAGGGTTAGGATCAAAATTCCAGAAGTTTAATCTTCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: QVKVPPMTIVQNVCL*KGLGSKFQKFNLPP Trigger: TGGTGGAAGATTAAACTTCTGGAATTTTGATCCTAACCCTTTGCAAAGACACACGTTCTGGACAATTGTCATTGGAGGGACTTTTACCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS-3UTR CAA 90 bp | TGGGGACTGAAGGAAAGAGGTGACATAGTTTATATTGGATGTCTCAAGACATATCACCATGATCCCAACTaGAAAAACATCTGTCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: WGLKERGDIVYIGCLKTYHHDPN*KNICPD Trigger: GTCTGGACAGATGTTTTTCAAGTTGGGATCATGGTG...ATATGTCTTGAGACATCCAATATAAACTATGTCACCTCTTTCCTTCAGTCCCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS-3UTR CAA 90 bp | TGGGGACTGAAGGAAAGAGGTGACATAGTTTATATTGGATGTCTCAAGACATATCATAGAGGGACAGTTTaGCATGGAGTCTGCTTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: WGLKERGDIVYIGCLKTYHRGTV*HGVCFY Trigger: GTAAAAGCAGACTCCATGCAAAACTGTCCCTCTATG...ATATGTCTTGAGACATCCAATATAAACTATGTCACCTCTTTCCTTCAGTCCCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS-3UTR CAA 90 bp | TGGGGACTGAAGGAAAGAGGTGACATAGTTTATATTGGATGTCTCAAGACATATAATATATCTCTGCACTaGGGACTGGTTGACACCATA | + |
|
Preference number: 5 (lower is better) Translates to: WGLKERGDIVYIGCLKTYNISLH*GLVDTI Trigger: TATGGTGTCAACCAGTCCCAAGTGCAGAGATATATT...ATATGTCTTGAGACATCCAATATAAACTATGTCACCTCTTTCCTTCAGTCCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGCAAGAAGCTGGAACAGTTAAGTCCAGGTAACATGCTCTACAAAAGCAAGGATAATGAATACCAATaGTCCATCAGTGGAGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: KSKKLEQLSPGNMLYKSKDNEYQ*SISGVL Trigger: AAGGACTCCACTGATGGACAATTGGTATTCATTATC...CTTGCTTTTGTAGAGCATGTTACCTGGACTTAACTGTTCCAGCTTCTTGCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS-3UTR CAA 90 bp | CTAGCAAATAATATTTGCCTCAAATCACTTGAGTTAATGAAATCCTGGTCTGTCATCAAATCCTGTAACTaGATTCAAAGCCAGAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LANNICLKSLELMKSWSVIKSCN*IQSQSR Trigger: CCTGCTCTGGCTTTGAATCAAGTTACAGGATTTGAT...GACAGACCAGGATTTCATTAACTCAAGTGATTTGAGGCAAATATTATTTGCTAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS-3UTR CAA 90 bp | CTAGCAAATAATATTTGCCTCAAATCACTTGAGTTAATGAAATCCTGGTCTGTCAGTGTACAGAATTGTTaGAACGATGAAGAGGATTGT | + |
|
Preference number: 5 (lower is better) Translates to: LANNICLKSLELMKSWSVSVQNC*NDEEDC Trigger: ACAATCCTCTTCATCGTTCAAACAATTCTGTACACT...GACAGACCAGGATTTCATTAACTCAAGTGATTTGAGGCAAATATTATTTGCTAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS GCA 72 bp | ATAGATGCCTATAGCCGCCGAGATGAGCAGCATGCCTaGGAACACCACGTAGTCCCACACCACAAAACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: IDAYSRRDEQHA*EHHVVPHHKTA Trigger: GGCAGTTTTGTGGTGTGGGACTACGTGGTGTTCGCAGGCATGCTGCTCATCTCGGCGGCTATAGGCATCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS GCA 72 bp | AGGCTCCCATCAGCGATGCCAGGGCAGCCATTCCAATaGACAGAGCTCCATACAGAACACTCATTCCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RLPSAMPGQPFQ*TELHTEHSFLG Trigger: CCCAAGGAATGAGTGTTCTGTATGGAGCTCTGTGCATTGGAATGGCTGCCCTGGCATCGCTGATGGGAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS TCA 72 bp | CCCATAAGGAAATGGCAAATCCAGCCAACAGACCAGTaGGTGCTCCAATCGAGTTGGCGAAGGGGACCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: PIRKWQIQPTDQ*VLQSSWRRGPR Trigger: TCTTGGTCCCCTTCGCCAACTCGATTGGAGCACTCACTGGTCTGTTGGCTGGATTTGCCATTTCCTTATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS CAA 72 bp | GACAGAGACTTCTCTGAGAGAGACTTAAAGCGGGGTTaGATGAGATCTTCCACGGTGACTGCCGCCAAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: DRDFSERDLKRG*MRSSTVTAAKA Trigger: TGCCTTGGCGGCAGTCACCGTGGAAGATCTCATCAAACCCCGCTTTAAGTCTCTCTCAGAGAAGTCTCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS CAA 72 bp | TTGATGAGATCTTCCACGGTGACTGCCGCCAAGGCATaGATACTGGAGGACACTGTGCTTAATGTCCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: LMRSSTVTAAKA*ILEDTVLNVPL Trigger: CAGTGGGACATTAAGCACAGTGTCCTCCAGTATCAATGCCTTGGCGGCAGTCACCGTGGAAGATCTCATCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS TCA 72 bp | TTTCTGTGGTTGACATCCAGTCCGACCCATTGTGCGTaGTGTTACAGCCATAGGTTTCAAGGGGCAATGGTA | + |
|
Preference number: 6 (lower is better) Translates to: FLWLTSSPTHCA*CYSHRFQGAMV Trigger: TACCATTGCCCCTTGAAACCTATGGCTGTAACATCACGCACAATGGGTCGGACTGGATGTCAACCACAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS CAA 90 bp | TGCCTGTATAATTACGGATGCAAATCCAGCCACCATGATCCCAACTaGAAAAACATCTGTCCAGACAACTGCTTTAAGACCGCCCAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: CLYNYGCKSSHHDPN*KNICPDNCFKTAQC Trigger: ACACTGGGCGGTCTTAAAGCAGTTGTCTGGACAGATGTTTTTCAAGTTGGGATCATGGTGGCTGGATTTGCATCCGTAATTATACAGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS GCA 72 bp | CATGATCCCAACTTGAAAAACATCTGTCCAGACAACTaGTTTAAGACCGCCCAGTGTGCAGTAGAATGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: HDPNLKNICPDN*FKTAQCAVECA Trigger: TGCACATTCTACTGCACACTGGGCGGTCTTAAAGCAGTTGTCTGGACAGATGTTTTTCAAGTTGGGATCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS TCA 72 bp | ATTACGGATGCAAATCCAGCCACCATGATCCCAACTTaGAAAACATCTGTCCAGACAACTGCTTTAAGACCG | + |
|
Preference number: 6 (lower is better) Translates to: ITDANPATMIPT*KTSVQTTALRP Trigger: CGGTCTTAAAGCAGTTGTCTGGACAGATGTTTTTCAAGTTGGGATCATGGTGGCTGGATTTGCATCCGTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS CAA 72 bp | AATTACGGATGCAAATCCAGCCACCATGATCCCAACTaGAAAAACATCTGTCCAGACAACTGCTTTAAGACC | + |
|
Preference number: 6 (lower is better) Translates to: NYGCKSSHHDPN*KNICPDNCFKT Trigger: GGTCTTAAAGCAGTTGTCTGGACAGATGTTTTTCAAGTTGGGATCATGGTGGCTGGATTTGCATCCGTAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
||
| CDS GCA 72 bp | GTCCCTCCAATGACAATTGTCCAGAACGTGTGTCTTTaGAAAGGGTTAGGATCAAAATTCCAGAAGTTTAAT | + |
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Preference number: 6 (lower is better) Translates to: VPPMTIVQNVCL*KGLGSKFQKFN Trigger: ATTAAACTTCTGGAATTTTGATCCTAACCCTTTGCAAAGACACACGTTCTGGACAATTGTCATTGGAGGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| CDS CAA 72 bp | ATTGTCCATCAGTGGAGTCCTTTCCGCATTATGTATTaGAAAAGCGCTAGTAGAAAATGGCATTTCTGTGGT | + |
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Preference number: 6 (lower is better) Translates to: IVHQWSPFRIMY*KSASRKWHFCG Trigger: ACCACAGAAATGCCATTTTCTACTAGCGCTTTTCAAATACATAATGCGGAAAGGACTCCACTGATGGACAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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| CDS CAA 72 bp | ATAGTACTGAAGTACAGATATGATAATGAATACCAATaGTCCATCAGTGGAGTCCTTTCCGCATTATGTATT | + |
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Preference number: 6 (lower is better) Translates to: IVLKYRYDNEYQ*SISGVLSALCI Trigger: AATACATAATGCGGAAAGGACTCCACTGATGGACAATTGGTATTCATTATCATATCTGTACTTCAGTACTAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020255.8 |
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