Pregenerated sensors for SLC5A7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023945Ensembl transcript IDs: ENSMUST00000095712.5
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACATGCAAGATGGCAAGAAAGGGTAAGGAAGCGCACCTTGAAAAATaGGTAAAAGCCACAGTTCAAATCAGGCAAGAGCAAGACAGCCTA | + |
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Preference number: 1 (lower is better) Translates to: TCKMARKGKEAHLEK*VKATVQIRQEQDSL Trigger: TAGGCTGTCTTGCTCTTGCCTGATTTGAACTGTGGCTTTTACTCATTTTTCAAGGTGCGCTTCCTTACCCTTTCTTGCCATCTTGCATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| 3UTR TCA 90 bp | CTTAGAGATGTCACCATTCTGATACAGAGTAGACCTTCCGTACTTTaGAGCATCATCCCTTGCTTGAAATTCATGAGGAATTCATTCCAG | + |
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Preference number: 1 (lower is better) Translates to: LRDVTILIQSRPSVL*SIIPCLKFMRNSFQ Trigger: CTGGAATGAATTCCTCATGAATTTCAAGCAAGGGATGATGCTTCAAAGTACGGAAGGTCTACTCTGTATCAGAATGGTGACATCTCTAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| 3UTR GCA 90 bp | CAATCATTGGTAATATATGGGAGGGAAACTCCTATCTTGTTCCAATaGTACACATATTACTTCCCAGGCAAGAGGCTGAAACAGTTGTGT | + |
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Preference number: 1 (lower is better) Translates to: QSLVIYGRETPILFQ*YTYYFPGKRLKQLC Trigger: ACACAACTGTTTCAGCCTCTTGCCTGGGAAGTAATATGTGTAGCATTGGAACAAGATAGGAGTTTCCCTCCCATATATTACCAATGATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| 3UTR CCA 90 bp | GACTCCATGATGTTCATAATTCAAGAACGCACATTAACAATCCGATaGAAGGGCACAGATGATGAGTTGGGCAAAATTCACTCTTTTGTC | + |
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Preference number: 1 (lower is better) Translates to: DSMMFIIQERTLTIR*KGTDDELGKIHSFV Trigger: GACAAAAGAGTGAATTTTGCCCAACTCATCATCTGTGCCCTTCCATCGGATTGTTAATGTGCGTTCTTGAATTATGAACATCATGGAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| 3UTR-3UTR GCA 90 bp | AGATGGCTCATCTTTGCCTCCAACACTGACTTAGAAGATAGGCCAAGACATTGTTGGAGAGAGTACACATaGAAGATGGCAAGAAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: RWLIFASNTDLEDRPRHCWREYT*KMARKG Trigger: ACCCTTTCTTGCCATCTTGCATGTGTACTCTCTCCA...ACAATGTCTTGGCCTATCTTCTAAGTCAGTGTTGGAGGCAAAGATGAGCCATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| 3UTR-3UTR GCA 90 bp | CTGCAATGTAGCTCAGTAAGAGAGTTCTTACCCAGCATGTGCAATAGATTTCCAAACTGGCTAACTCACTaGATCATCCACAGTAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: LQCSSVREFLPSMCNRFPNWLTH*IIHSSD Trigger: GTCACTACTGTGGATGATGCAGTGAGTTAGCCAGTT...TGGAAATCTATTGCACATGCTGGGTAAGAACTCTCTTACTGAGCTACATTGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| 3UTR CAA 90 bp | TCCGATGGAAGGGCACAGATGATGAGTTGGGCAAAATTCACTCTTTaGTCTTTGTTGAAAGACCTTGTGGGTCTGAAATACCATGTTTAC | + |
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Preference number: 2 (lower is better) Translates to: SDGRAQMMSWAKFTL*SLLKDLVGLKYHVY Trigger: GTAAACATGGTATTTCAGACCCACAAGGTCTTTCAACAAAGACAAAAGAGTGAATTTTGCCCAACTCATCATCTGTGCCCTTCCATCGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| 3UTR-3UTR GCA 90 bp | GATGGAAGGGCACAGATGATGAGTTGGGCAAAATTCACTCTTTTGTCTTTGTTGTTCTTACCCAGCATGTaGAATAGATTTCCAGCACCT | + |
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Preference number: 2 (lower is better) Translates to: DGRAQMMSWAKFTLLSLLFLPSM*NRFPAP Trigger: AGGTGCTGGAAATCTATTGCACATGCTGGGTAAGAA...CAACAAAGACAAAAGAGTGAATTTTGCCCAACTCATCATCTGTGCCCTTCCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| 3UTR-3UTR CCA 90 bp | GTAATATATGGGAGGGAAACTCCTATCTTGTTCCAATGCTACACATATTACTTCGAGAGTAGGAGGGGATaGATAGATGAAGGGATGGTG | + |
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Preference number: 2 (lower is better) Translates to: VIYGRETPILFQCYTYYFESRRG*IDEGMV Trigger: CACCATCCCTTCATCTATCCATCCCCTCCTACTCTC...GAAGTAATATGTGTAGCATTGGAACAAGATAGGAGTTTCCCTCCCATATATTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| 3UTR-3UTR CCA 90 bp | GTAATATATGGGAGGGAAACTCCTATCTTGTTCCAATGCTACACATATTACTTCGAGAATTCTAGGGTTTaGGGGCACAAGGTTTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: VIYGRETPILFQCYTYYFENSRV*GHKVCV Trigger: CACACAAACCTTGTGCCCCCAAACCCTAGAATTCTC...GAAGTAATATGTGTAGCATTGGAACAAGATAGGAGTTTCCCTCCCATATATTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| 3UTR CAA 90 bp | AGGGCACAGATGATGAGTTGGGCAAAATTCACTCTTTTGTCTTTGTaGAAAGACCTTGTGGGTCTGAAATACCATGTTTACCAGAAATTT | + |
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Preference number: 2 (lower is better) Translates to: RAQMMSWAKFTLLSL*KDLVGLKYHVYQKF Trigger: AAATTTCTGGTAAACATGGTATTTCAGACCCACAAGGTCTTTCAACAAAGACAAAAGAGTGAATTTTGCCCAACTCATCATCTGTGCCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| 3UTR CAA 90 bp | AACATAGTACAATCATTGGTAATATATGGGAGGGAAACTCCTATCTaGTTCCAATGCTACACATATTACTTCCCAGGCAAGAGGCTGAAA | + |
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Preference number: 2 (lower is better) Translates to: NIVQSLVIYGRETPI*FQCYTYYFPGKRLK Trigger: TTTCAGCCTCTTGCCTGGGAAGTAATATGTGTAGCATTGGAACAAGATAGGAGTTTCCCTCCCATATATTACCAATGATTGTACTATGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| 3UTR-3UTR TCA 90 bp | GTAATATATGGGAGGGAAACTCCTATCTTGTTCCAATGCTACACATATTACTTCTGCCTGAATCTGGAATaGCTTAGAGATGTCACCATT | + |
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Preference number: 2 (lower is better) Translates to: VIYGRETPILFQCYTYYFCLNLE*LRDVTI Trigger: AATGGTGACATCTCTAAGTCATTCCAGATTCAGGCA...GAAGTAATATGTGTAGCATTGGAACAAGATAGGAGTTTCCCTCCCATATATTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| 3UTR-3UTR CCA 90 bp | ATAATAACTGTAACCTATAAAGAGAATTCTAGGGTTTGGGGGCACAAGGTTTGTAGTACACATGCAAGATaGCAAGAAAGGGTAAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: IITVTYKENSRVWGHKVCSTHAR*QERVRK Trigger: CTTCCTTACCCTTTCTTGCCATCTTGCATGTGTACT...ACAAACCTTGTGCCCCCAAACCCTAGAATTCTCTTTATAGGTTACAGTTATTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| 3UTR-3UTR GCA 90 bp | AGACCTTGTGGGTCTGAAATACCATGTTTACCAGAAATTTCATCCTTGTCACTAACTACCCTACAGCAATaGCCTCTTCTGTATATTTTA | + |
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Preference number: 2 (lower is better) Translates to: RPCGSEIPCLPEISSLSLTTLQQ*PLLYIL Trigger: TAAAATATACAGAAGAGGGCATTGCTGTAGGGTAGT...TAGTGACAAGGATGAAATTTCTGGTAAACATGGTATTTCAGACCCACAAGGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| 3UTR-3UTR GCA 90 bp | TTCTTGGTGAGGTGTTTGGAAGCTGCTGGTAATAAATATACATTGAACGCATGCTTGGCTAGGGCTTTATaGATTTTTATGCACTTAACA | + |
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Preference number: 2 (lower is better) Translates to: FLVRCLEAAGNKYTLNACLARAL*IFMHLT Trigger: TGTTAAGTGCATAAAAATGCATAAAGCCCTAGCCAA...GCATGCGTTCAATGTATATTTATTACCAGCAGCTTCCAAACACCTCACCAAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| 3UTR-3UTR CCA 90 bp | ATAATAACTGTAACCTATAAAGAGAATTCTAGGGTTTGGGGGCACAAGGTTTGTAAGATAAGTAATATTTaGCCACCTTCTTTGGCTAGG | + |
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Preference number: 2 (lower is better) Translates to: IITVTYKENSRVWGHKVCKISNI*PPSLAR Trigger: CCTAGCCAAAGAAGGTGGCCAAATATTACTTATCTT...ACAAACCTTGTGCCCCCAAACCCTAGAATTCTCTTTATAGGTTACAGTTATTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| 3UTR CAA 90 bp | CCATTAATAAATGTCCAAAATAAGCAGGGTTTGTTTTCCAGTTTCTaGGTGAGGTGTTTGGAAGCTGCTGGTAATAAATATACATTGAAC | + |
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Preference number: 2 (lower is better) Translates to: PLINVQNKQGLFSSF*VRCLEAAGNKYTLN Trigger: GTTCAATGTATATTTATTACCAGCAGCTTCCAAACACCTCACCAAGAAACTGGAAAACAAACCCTGCTTATTTTGGACATTTATTAATGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| 3UTR CCA 72 bp | AAGAGCAAGACAGCCTACCCATGGAGAGAAGTCAACTaGCTAACTCACTGCATCATCCACAGTAGTGACTGG | + |
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Preference number: 3 (lower is better) Translates to: KSKTAYPWREVN*LTHCIIHSSDW Trigger: CCAGTCACTACTGTGGATGATGCAGTGAGTTAGCCAGTTGACTTCTCTCCATGGGTAGGCTGTCTTGCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| 3UTR CCA 72 bp | CAGTTCAAATCAGGCAAGAGCAAGACAGCCTACCCATaGAGAGAAGTCAACTGGCTAACTCACTGCATCATC | + |
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Preference number: 3 (lower is better) Translates to: QFKSGKSKTAYP*REVNWLTHCII Trigger: GATGATGCAGTGAGTTAGCCAGTTGACTTCTCTCCATGGGTAGGCTGTCTTGCTCTTGCCTGATTTGAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| 3UTR TCA 72 bp | ATGGCAAGAAAGGGTAAGGAAGCGCACCTTGAAAAATaGGTAAAAGCCACAGTTCAAATCAGGCAAGAGCAA | + |
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Preference number: 3 (lower is better) Translates to: MARKGKEAHLEK*VKATVQIRQEQ Trigger: TTGCTCTTGCCTGATTTGAACTGTGGCTTTTACTCATTTTTCAAGGTGCGCTTCCTTACCCTTTCTTGCCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| 3UTR TCA 72 bp | GTCACCATTCTGATACAGAGTAGACCTTCCGTACTTTaGAGCATCATCCCTTGCTTGAAATTCATGAGGAAT | + |
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Preference number: 3 (lower is better) Translates to: VTILIQSRPSVL*SIIPCLKFMRN Trigger: ATTCCTCATGAATTTCAAGCAAGGGATGATGCTTCAAAGTACGGAAGGTCTACTCTGTATCAGAATGGTGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| 3UTR GCA 72 bp | GTAATATATGGGAGGGAAACTCCTATCTTGTTCCAATaGTACACATATTACTTCCCAGGCAAGAGGCTGAAA | + |
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Preference number: 3 (lower is better) Translates to: VIYGRETPILFQ*YTYYFPGKRLK Trigger: TTTCAGCCTCTTGCCTGGGAAGTAATATGTGTAGCATTGGAACAAGATAGGAGTTTCCCTCCCATATATTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| 3UTR CCA 72 bp | ATGTTCATAATTCAAGAACGCACATTAACAATCCGATaGAAGGGCACAGATGATGAGTTGGGCAAAATTCAC | + |
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Preference number: 3 (lower is better) Translates to: MFIIQERTLTIR*KGTDDELGKIH Trigger: GTGAATTTTGCCCAACTCATCATCTGTGCCCTTCCATCGGATTGTTAATGTGCGTTCTTGAATTATGAACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| 3UTR-3UTR CAA 90 bp | GTAATATATGGGAGGGAAACTCCTATCTTGTTCCAATGCTACACATATTACTTCTTGAAGCATCATCCCTaGCTTGAAATTCATGAGGAA | + |
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Preference number: 3 (lower is better) Translates to: VIYGRETPILFQCYTYYFLKHHP*LEIHEE Trigger: TTCCTCATGAATTTCAAGCAAGGGATGATGCTTCAA...GAAGTAATATGTGTAGCATTGGAACAAGATAGGAGTTTCCCTCCCATATATTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| 3UTR TCA 72 bp | TCCAAAATAAGCAGGGTTTGTTTTCCAGTTTCTTGGTaGGGTGTTTGGAAGCTGCTGGTAATAAATATACAT | + |
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Preference number: 3 (lower is better) Translates to: SKISRVCFPVSW*GVWKLLVINIH Trigger: ATGTATATTTATTACCAGCAGCTTCCAAACACCTCACCAAGAAACTGGAAAACAAACCCTGCTTATTTTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| 3UTR-3UTR CAA 90 bp | ATAATAACTGTAACCTATAAAGAGAATTCTAGGGTTTGGGGGCACAAGGTTTGTTTAATGACTGACCTCTaGAAATCCATGTACACAACA | + |
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Preference number: 3 (lower is better) Translates to: IITVTYKENSRVWGHKVCLMTDL*KSMYTT Trigger: TGTTGTGTACATGGATTTCAAGAGGTCAGTCATTAA...ACAAACCTTGTGCCCCCAAACCCTAGAATTCTCTTTATAGGTTACAGTTATTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| 3UTR CCA 72 bp | TTACCTAAGAAACATAGTACAATCATTGGTAATATATaGGAGGGAAACTCCTATCTTGTTCCAATGCTACAC | + |
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Preference number: 3 (lower is better) Translates to: LPKKHSTIIGNI*EGNSYLVPMLH Trigger: GTGTAGCATTGGAACAAGATAGGAGTTTCCCTCCCATATATTACCAATGATTGTACTATGTTTCTTAGGTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| 3UTR TCA 72 bp | AAATGGCTTATGTGGAACAGTGTCAAGAGTAGGTCCTaGACACTAAACTATTCCATTAATAAATGTCCAAAA | + |
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Preference number: 3 (lower is better) Translates to: KWLMWNSVKSRS*TLNYSINKCPK Trigger: TTTTGGACATTTATTAATGGAATAGTTTAGTGTTCAGGACCTACTCTTGACACTGTTCCACATAAGCCATTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS-3UTR TCA 90 bp | GCCACAGTTCAAATCAGGCAAGAGCAAGACAGCCTACCCATGGAGAGAAGTCAACTTCTGCTGTCCCATTaGTGTAGCCTCCTCCAACCC | + |
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Preference number: 4 (lower is better) Translates to: ATVQIRQEQDSLPMERSQLLLSH*CSLLQP Trigger: GGGTTGGAGGAGGCTACATCAATGGGACAGCAGAAG...TTGACTTCTCTCCATGGGTAGGCTGTCTTGCTCTTGCCTGATTTGAACTGTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS-3UTR GCA 90 bp | GCCACAGTTCAAATCAGGCAAGAGCAAGACAGCCTACCCATGGAGAGAAGTCAACAGGCACCCAAAAGCTaGCAGGAAGGACAGTACCTG | + |
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Preference number: 4 (lower is better) Translates to: ATVQIRQEQDSLPMERSQQAPKS*QEGQYL Trigger: CAGGTACTGTCCTTCCTGGCAGCTTTTGGGTGCCTG...TTGACTTCTCTCCATGGGTAGGCTGTCTTGCTCTTGCCTGATTTGAACTGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS-3UTR TCA 90 bp | TTCAAATCAGGCAAGAGCAAGACAGCCTACCCATGGAGAGAAGTCAACTGGCTAAGTCAGCTGAGGACATaGCAGCAGCTGAAACAGCAC | + |
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Preference number: 4 (lower is better) Translates to: FKSGKSKTAYPWREVNWLSQLRT*QQLKQH Trigger: GTGCTGTTTCAGCTGCTGTCATGTCCTCAGCTGACT...TAGCCAGTTGACTTCTCTCCATGGGTAGGCTGTCTTGCTCTTGCCTGATTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS-3UTR GCA 90 bp | TTCAAATCAGGCAAGAGCAAGACAGCCTACCCATGGAGAGAAGTCAACTGGCTACCCATACACTGCTTCTaGTGTCCCATTGATGTAGCC | + |
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Preference number: 4 (lower is better) Translates to: FKSGKSKTAYPWREVNWLPIHCF*CPIDVA Trigger: GGCTACATCAATGGGACAGCAGAAGCAGTGTATGGG...TAGCCAGTTGACTTCTCTCCATGGGTAGGCTGTCTTGCTCTTGCCTGATTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS-3UTR GCA 90 bp | GCCACAGTTCAAATCAGGCAAGAGCAAGACAGCCTACCCATGGAGAGAAGTCAAGACAACATCAGTATATaGCACAGAGTAGAGCCCACC | + |
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Preference number: 4 (lower is better) Translates to: ATVQIRQEQDSLPMERSQDNISI*HRVEPT Trigger: GGTGGGCTCTACTCTGTGGCATATACTGATGTTGTC...TTGACTTCTCTCCATGGGTAGGCTGTCTTGCTCTTGCCTGATTTGAACTGTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS-3UTR CCA 90 bp | TTCAAATCAGGCAAGAGCAAGACAGCCTACCCATGGAGAGAAGTCAACTGGCTAGGTTGCCGCTGTTTTTaGTTTTCCATGCAGCCCATA | + |
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Preference number: 4 (lower is better) Translates to: FKSGKSKTAYPWREVNWLGCRCF*FSMQPI Trigger: TATGGGCTGCATGGAAAACCAAAAACAGCGGCAACC...TAGCCAGTTGACTTCTCTCCATGGGTAGGCTGTCTTGCTCTTGCCTGATTTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS-3UTR TCA 90 bp | CTGCAATGTAGCTCAGTAAGAGAGTTCTTACCCAGCATGTGCAATAGATTTCCATATCCAATGGGTGCCTaGGCCCAAGCTAGACCACAA | + |
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Preference number: 4 (lower is better) Translates to: LQCSSVREFLPSMCNRFPYPMGA*AQARPQ Trigger: TTGTGGTCTAGCTTGGGCTCAGGCACCCATTGGATA...TGGAAATCTATTGCACATGCTGGGTAAGAACTCTCTTACTGAGCTACATTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS-3UTR TCA 90 bp | CTGCAATGTAGCTCAGTAAGAGAGTTCTTACCCAGCATGTGCAATAGATTTCCAGGACATGACAGCAGCTaGAACAGCACCAAGCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: LQCSSVREFLPSMCNRFPGHDSS*NSTKPK Trigger: TTTGGGCTTGGTGCTGTTTCAGCTGCTGTCATGTCC...TGGAAATCTATTGCACATGCTGGGTAAGAACTCTCTTACTGAGCTACATTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS-3UTR GCA 90 bp | AGATGGCTCATCTTTGCCTCCAACACTGACTTAGAAGATAGGCCAAGACATTGTCAAAGCCATGGCTGTTaGAGATGCTCCGAACACAAG | + |
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Preference number: 4 (lower is better) Translates to: RWLIFASNTDLEDRPRHCQSHGC*RCSEHK Trigger: CTTGTGTTCGGAGCATCTGCAACAGCCATGGCTTTG...ACAATGTCTTGGCCTATCTTCTAAGTCAGTGTTGGAGGCAAAGATGAGCCATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS-3UTR GCA 90 bp | TTCAAATCAGGCAAGAGCAAGACAGCCTACCCATGGAGAGAAGTCAACTGGCTACTCTTCACTGTGCCTTaGGACAACAGCATCAAATAC | + |
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Preference number: 4 (lower is better) Translates to: FKSGKSKTAYPWREVNWLLFTVP*DNSIKY Trigger: GTATTTGATGCTGTTGTCGCAAGGCACAGTGAAGAG...TAGCCAGTTGACTTCTCTCCATGGGTAGGCTGTCTTGCTCTTGCCTGATTTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS-3UTR CCA 90 bp | TTCTTGGTGAGGTGTTTGGAAGCTGCTGGTAATAAATATACATTGAACGCATGCCAGACCCCTCCGGACTaGAATCAACATCAAGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: FLVRCLEAAGNKYTLNACQTPPD*NQHQGG Trigger: CCCTCCTTGATGTTGATTCCAGTCCGGAGGGGTCTG...GCATGCGTTCAATGTATATTTATTACCAGCAGCTTCCAAACACCTCACCAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS-3UTR TCA 90 bp | TATATTTTAACATGTGTAAGATATGCTCCAAGCCTTTCTTCCAGTACTACCCTACCATCAGTGCAGGGATaGAGAGCAGCCCACCCATGC | + |
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Preference number: 4 (lower is better) Translates to: YILTCVRYAPSLSSSTTLPSVQG*RAAHPC Trigger: GCATGGGTGGGCTGCTCTTCATCCCTGCACTGATGG...TAGGGTAGTACTGGAAGAAAGGCTTGGAGCATATCTTACACATGTTAAAATATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS-3UTR GCA 90 bp | GATGGAAGGGCACAGATGATGAGTTGGGCAAAATTCACTCTTTTGTCTTTGTTGCATGGCTGTTGCAGATaGTCCGAACACAAGCACAGT | + |
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Preference number: 4 (lower is better) Translates to: DGRAQMMSWAKFTLLSLLHGCCR*SEHKHS Trigger: ACTGTGCTTGTGTTCGGAGCATCTGCAACAGCCATG...CAACAAAGACAAAAGAGTGAATTTTGCCCAACTCATCATCTGTGCCCTTCCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS-3UTR CCA 90 bp | CTGCAATGTAGCTCAGTAAGAGAGTTCTTACCCAGCATGTGCAATAGATTTCCAGAAGTAGGCTTGCCATaGGATTCCACCCAGCATCAA | + |
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Preference number: 4 (lower is better) Translates to: LQCSSVREFLPSMCNRFPEVGLP*DSTQHQ Trigger: TTGATGCTGGGTGGAATCCCATGGCAAGCCTACTTC...TGGAAATCTATTGCACATGCTGGGTAAGAACTCTCTTACTGAGCTACATTGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS-3UTR CCA 90 bp | GATGGAAGGGCACAGATGATGAGTTGGGCAAAATTCACTCTTTTGTCTTTGTTGCTTAGTCTTGGGATCTaGATACCCGTAGGCAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: DGRAQMMSWAKFTLLSLLLSLGI*IPVGSL Trigger: CAGACTGCCTACGGGTATCCAGATCCCAAGACTAAG...CAACAAAGACAAAAGAGTGAATTTTGCCCAACTCATCATCTGTGCCCTTCCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS-3UTR TCA 90 bp | GTAATATATGGGAGGGAAACTCCTATCTTGTTCCAATGCTACACATATTACTTCGGTGACTGCAGGATGTaGCAGGGCAAAAGGGACACT | + |
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Preference number: 4 (lower is better) Translates to: VIYGRETPILFQCYTYYFGDCRM*QGKRDT Trigger: AGTGTCCCTTTTGCCCTGTCACATCCTGCAGTCACC...GAAGTAATATGTGTAGCATTGGAACAAGATAGGAGTTTCCCTCCCATATATTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS-3UTR TCA 90 bp | CTGCAATGTAGCTCAGTAAGAGAGTTCTTACCCAGCATGTGCAATAGATTTCCAGGTGTAGACTTCAACTaGTTCAATGGTTCCCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: LQCSSVREFLPSMCNRFPGVDFN*FNGSQP Trigger: TGGCTGGGAACCATTGAATCAGTTGAAGTCTACACC...TGGAAATCTATTGCACATGCTGGGTAAGAACTCTCTTACTGAGCTACATTGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS-3UTR GCA 90 bp | GTAATATATGGGAGGGAAACTCCTATCTTGTTCCAATGCTACACATATTACTTCCTGAGGGTTAGGCTCTaGCGAGGTTTCACAGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VIYGRETPILFQCYTYYFLRVRL*RGFTGA Trigger: TGCACCTGTGAAACCTCGGCAGAGCCTAACCCTCAG...GAAGTAATATGTGTAGCATTGGAACAAGATAGGAGTTTCCCTCCCATATATTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS-3UTR CCA 90 bp | AGACCTTGTGGGTCTGAAATACCATGTTTACCAGAAATTTCATCCTTGTCACTACCCAGCCAGGGACTCTaGTATTTAGCATGCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RPCGSEIPCLPEISSLSLPSQGL*YLACTA Trigger: AGCTGTGCATGCTAAATACCAGAGTCCCTGGCTGGG...TAGTGACAAGGATGAAATTTCTGGTAAACATGGTATTTCAGACCCACAAGGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS-3UTR CCA 90 bp | AGACCTTGTGGGTCTGAAATACCATGTTTACCAGAAATTTCATCCTTGTCACTATCGTCAGCAAAGCCATaGCTGTTGCAGATGCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: RPCGSEIPCLPEISSLSLSSAKP*LLQMLR Trigger: TCGGAGCATCTGCAACAGCCATGGCTTTGCTGACGA...TAGTGACAAGGATGAAATTTCTGGTAAACATGGTATTTCAGACCCACAAGGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS-3UTR GCA 90 bp | TATATTTTAACATGTGTAAGATATGCTCCAAGCCTTTCTTCCAGTACTACCCTACATCTCTCCCATCAGTaGAGGGATGAAGAGCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: YILTCVRYAPSLSSSTTLHLSHQ*RDEEQP Trigger: GGGCTGCTCTTCATCCCTGCACTGATGGGAGAGATG...TAGGGTAGTACTGGAAGAAAGGCTTGGAGCATATCTTACACATGTTAAAATATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS-3UTR CCA 90 bp | AGACCTTGTGGGTCTGAAATACCATGTTTACCAGAAATTTCATCCTTGTCACTATTCACTGCGCTCTTCTaGGTTGCCGCTGTTTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RPCGSEIPCLPEISSLSLFTALF*VAAVFG Trigger: ACCAAAAACAGCGGCAACCCAGAAGAGCGCAGTGAA...TAGTGACAAGGATGAAATTTCTGGTAAACATGGTATTTCAGACCCACAAGGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS-3UTR CCA 90 bp | CTGCAATGTAGCTCAGTAAGAGAGTTCTTACCCAGCATGTGCAATAGATTTCCATACACAGAGCAGCTGTaGGAAGATGATGATGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LQCSSVREFLPSMCNRFPYTEQL*EDDDVD Trigger: GTCTACATCATCATCTTCCCACAGCTGCTCTGTGTA...TGGAAATCTATTGCACATGCTGGGTAAGAACTCTCTTACTGAGCTACATTGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS-3UTR GCA 90 bp | ATAATAACTGTAACCTATAAAGAGAATTCTAGGGTTTGGGGGCACAAGGTTTGTTGCGCTCTTCTGGGTTaGCGCTGTTTTTGGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IITVTYKENSRVWGHKVCCALLG*RCFWFS Trigger: GGAAAACCAAAAACAGCGGCAACCCAGAAGAGCGCA...ACAAACCTTGTGCCCCCAAACCCTAGAATTCTCTTTATAGGTTACAGTTATTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS-3UTR CCA 90 bp | ATAAGTAATATTTGGCCACCTTCTTTGGCTAGGGCTTTATGCATTTTTATGCACGTACCTGAGCATAGGTaGCTGAGGATGAAGAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ISNIWPPSLARALCIFMHVPEHR*LRMKRG Trigger: TCCTCTCTTCATCCTCAGCCACCTATGCTCAGGTAC...GTGCATAAAAATGCATAAAGCCCTAGCCAAAGAAGGTGGCCAAATATTACTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS-3UTR GCA 90 bp | GTAATATATGGGAGGGAAACTCCTATCTTGTTCCAATGCTACACATATTACTTCTGCAGAGAAAATTGCTaGAGCCCAGAACATCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VIYGRETPILFQCYTYYFCRENC*SPEHLS Trigger: GGAGAGATGTTCTGGGCTGCAGCAATTTTCTCTGCA...GAAGTAATATGTGTAGCATTGGAACAAGATAGGAGTTTCCCTCCCATATATTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS-3UTR GCA 90 bp | TATATTTTAACATGTGTAAGATATGCTCCAAGCCTTTCTTCCAGTACTACCCTACGGGAGAATCATGTCTaGTTCCTCCTTAGTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: YILTCVRYAPSLSSSTTLRENHV*FLLSLG Trigger: CCCAAGACTAAGGAGGAAGCAGACATGATTCTCCCG...TAGGGTAGTACTGGAAGAAAGGCTTGGAGCATATCTTACACATGTTAAAATATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS-3UTR CCA 90 bp | GTAATATATGGGAGGGAAACTCCTATCTTGTTCCAATGCTACACATATTACTTCTCAGAGAATATCCAATaGGTGCCTGAGCCCAAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: VIYGRETPILFQCYTYYFSENIQ*VPEPKL Trigger: TAGCTTGGGCTCAGGCACCCATTGGATATTCTCTGA...GAAGTAATATGTGTAGCATTGGAACAAGATAGGAGTTTCCCTCCCATATATTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS-3UTR CCA 90 bp | GTAATATATGGGAGGGAAACTCCTATCTTGTTCCAATGCTACACATATTACTTCCTTCAACTGATTCAATaGTTCCCAGCCAGGGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: VIYGRETPILFQCYTYYFLQLIQ*FPARDS Trigger: AGAGTCCCTGGCTGGGAACCATTGAATCAGTTGAAG...GAAGTAATATGTGTAGCATTGGAACAAGATAGGAGTTTCCCTCCCATATATTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| 3UTR CAA 72 bp | AAGCAGGGTTTGTTTTCCAGTTTCTTGGTGAGGTGTTaGGAAGCTGCTGGTAATAAATATACATTGAACGCA | + |
|
Preference number: 4 (lower is better) Translates to: KQGLFSSFLVRC*EAAGNKYTLNA Trigger: TGCGTTCAATGTATATTTATTACCAGCAGCTTCCAAACACCTCACCAAGAAACTGGAAAACAAACCCTGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| 3UTR CAA 72 bp | CAATCATTGGTAATATATGGGAGGGAAACTCCTATCTaGTTCCAATGCTACACATATTACTTCCCAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QSLVIYGRETPI*FQCYTYYFPGK Trigger: CTTGCCTGGGAAGTAATATGTGTAGCATTGGAACAAGATAGGAGTTTCCCTCCCATATATTACCAATGATTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| 3UTR CAA 72 bp | CAGATGATGAGTTGGGCAAAATTCACTCTTTTGTCTTaGTTGAAAGACCTTGTGGGTCTGAAATACCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: QMMSWAKFTLLS*LKDLVGLKYHV Trigger: AACATGGTATTTCAGACCCACAAGGTCTTTCAACAAAGACAAAAGAGTGAATTTTGCCCAACTCATCATCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS-3UTR TCA 90 bp | ATAAGTAATATTTGGCCACCTTCTTTGGCTAGGGCTTTATGCATTTTTATGCACCTGATGCATTTTGTCTaGAGGAAAGCTGGTAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: ISNIWPPSLARALCIFMHLMHFV*RKAGRY Trigger: ATATCTACCAGCTTTCCTTCAGACAAAATGCATCAG...GTGCATAAAAATGCATAAAGCCCTAGCCAAAGAAGGTGGCCAAATATTACTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS-3UTR TCA 90 bp | ATAATAACTGTAACCTATAAAGAGAATTCTAGGGTTTGGGGGCACAAGGTTTGTCACAATTTCCTTGTCTaGTGCATTTTGTCTGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IITVTYKENSRVWGHKVCHNFLV*CILSEG Trigger: TCCTTCAGACAAAATGCATCAGACAAGGAAATTGTG...ACAAACCTTGTGCCCCCAAACCCTAGAATTCTCTTTATAGGTTACAGTTATTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS-3UTR GCA 90 bp | ATAATAACTGTAACCTATAAAGAGAATTCTAGGGTTTGGGGGCACAAGGTTTGTAAGAATGGCAATGAGTaGAGAGACAATGACCGATAT | + |
|
Preference number: 4 (lower is better) Translates to: IITVTYKENSRVWGHKVCKNGNE*RDNDRY Trigger: ATATCGGTCATTGTCTCTGCACTCATTGCCATTCTT...ACAAACCTTGTGCCCCCAAACCCTAGAATTCTCTTTATAGGTTACAGTTATTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| 3UTR CAA 72 bp | AATGTCCAAAATAAGCAGGGTTTGTTTTCCAGTTTCTaGGTGAGGTGTTTGGAAGCTGCTGGTAATAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: NVQNKQGLFSSF*VRCLEAAGNKY Trigger: ATATTTATTACCAGCAGCTTCCAAACACCTCACCAAGAAACTGGAAAACAAACCCTGCTTATTTTGGACATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| 3UTR CAA 72 bp | ATGATGAGTTGGGCAAAATTCACTCTTTTGTCTTTGTaGAAAGACCTTGTGGGTCTGAAATACCATGTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: MMSWAKFTLLSL*KDLVGLKYHVY Trigger: GTAAACATGGTATTTCAGACCCACAAGGTCTTTCAACAAAGACAAAAGAGTGAATTTTGCCCAACTCATCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS-3UTR CCA 90 bp | ATAAGTAATATTTGGCCACCTTCTTTGGCTAGGGCTTTATGCATTTTTATGCACAAAATGCAGAATAGCTaGACAACATCAGTATATGCC | + |
|
Preference number: 4 (lower is better) Translates to: ISNIWPPSLARALCIFMHKMQNS*TTSVYA Trigger: GGCATATACTGATGTTGTCCAGCTATTCTGCATTTT...GTGCATAAAAATGCATAAAGCCCTAGCCAAAGAAGGTGGCCAAATATTACTTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS-3UTR CCA 90 bp | ATAATAACTGTAACCTATAAAGAGAATTCTAGGGTTTGGGGGCACAAGGTTTGTGGAGAGAGTTTTAAATaGGAACCTCTGATTGTATAT | + |
|
Preference number: 4 (lower is better) Translates to: IITVTYKENSRVWGHKVCGESFK*EPLIVY Trigger: ATATACAATCAGAGGTTCCCATTTAAAACTCTCTCC...ACAAACCTTGTGCCCCCAAACCCTAGAATTCTCTTTATAGGTTACAGTTATTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| 3UTR CAA 72 bp | ACTATTCCATTAATAAATGTCCAAAATAAGCAGGGTTaGTTTTCCAGTTTCTTGGTGAGGTGTTTGGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TIPLINVQNKQG*FSSFLVRCLEA Trigger: AGCTTCCAAACACCTCACCAAGAAACTGGAAAACAAACCCTGCTTATTTTGGACATTTATTAATGGAATAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| 3UTR CAA 72 bp | GGGTCTGAAATACCATGTTTACCAGAAATTTCATCCTaGTCACTAGTAGTTTTTCATGCCCAAAGTTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: GSEIPCLPEISS*SLVVFHAQSFL Trigger: TAGAAAACTTTGGGCATGAAAAACTACTAGTGACAAGGATGAAATTTCTGGTAAACATGGTATTTCAGACCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS GCA 90 bp | GTACACAGGGCAGAGGTACTGCAGAACGATCGGGAGAATCATGTCTaGTTCCTCCTTAGTCTTGGGATCTGGATACCCGTAGGCAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VHRAEVLQNDRENHV*FLLSLGIWIPVGSL Trigger: CAGACTGCCTACGGGTATCCAGATCCCAAGACTAAGGAGGAAGCAGACATGATTCTCCCGATCGTTCTGCAGTACCTCTGCCCTGTGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS GCA 90 bp | GTACCAGAGCCCATACACAGTCTTCGTCAGCAAAGCCATGGCTGTTaGAGATGCTCCGAACACAAGCACAGTGATCCTCATGACCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: VPEPIHSLRQQSHGC*RCSEHKHSDPHDPH Trigger: GTGTGGGTCATGAGGATCACTGTGCTTGTGTTCGGAGCATCTGCAACAGCCATGGCTTTGCTGACGAAGACTGTGTATGGGCTCTGGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS GCA 90 bp | TCAACTGATTCAATGGTTCCCAGCCAGGGACTCTGGTATTTAGCATaGACAGCTGTGAATCCGATGTCGGTGACTGCAGGATGTGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: STDSMVPSQGLWYLA*TAVNPMSVTAGCDR Trigger: CCTGTCACATCCTGCAGTCACCGACATCGGATTCACAGCTGTGCATGCTAAATACCAGAGTCCCTGGCTGGGAACCATTGAATCAGTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS GCA 90 bp | ACAGCACCAAGCCCAAAGAAGGAGATGTACACAGGGCAGAGGTACTaGAGAACGATCGGGAGAATCATGTCTGCTTCCTCCTTAGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TAPSPKKEMYTGQRY*RTIGRIMSASSLVL Trigger: CAAGACTAAGGAGGAAGCAGACATGATTCTCCCGATCGTTCTGCAGTACCTCTGCCCTGTGTACATCTCCTTCTTTGGGCTTGGTGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS GCA 90 bp | GAGCCCATACACAGTCTTCGTCAGCAAAGCCATGGCTGTTGCAGATaGTCCGAACACAAGCACAGTGATCCTCATGACCCACACAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: EPIHSLRQQSHGCCR*SEHKHSDPHDPHNF Trigger: GAAATTGTGTGGGTCATGAGGATCACTGTGCTTGTGTTCGGAGCATCTGCAACAGCCATGGCTTTGCTGACGAAGACTGTGTATGGGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS CCA 90 bp | AACGATCGGGAGAATCATGTCTGCTTCCTCCTTAGTCTTGGGATCTaGATACCCGTAGGCAGTCTGGTTCCAGTCTGTGGAAGCTCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: NDRENHVCFLLSLGI*IPVGSLVPVCGSSN Trigger: ATTGGAGCTTCCACAGACTGGAACCAGACTGCCTACGGGTATCCAGATCCCAAGACTAAGGAGGAAGCAGACATGATTCTCCCGATCGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS TCA 90 bp | AGAAAATTGCTGCAGCCCAGAACATCTCTCCCATCAGTGCAGGGATaGAGAGCAGCCCACCCATGCGCTTTCCATAGATCTGTTGAAATG | + |
|
Preference number: 5 (lower is better) Translates to: RKLLQPRTSLPSVQG*RAAHPCAFHRSVEM Trigger: CATTTCAACAGATCTATGGAAAGCGCATGGGTGGGCTGCTCTTCATCCCTGCACTGATGGGAGAGATGTTCTGGGCTGCAGCAATTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS TCA 90 bp | AACAGACCACCTAAAATTAGACTCAGAGAATATCCAATGGGTGCCTaGGCCCAAGCTAGACCACAACCTGGCCCATACACTGCTTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: NRPPKIRLREYPMGA*AQARPQPGPYTASA Trigger: AGCAGAAGCAGTGTATGGGCCAGGTTGTGGTCTAGCTTGGGCTCAGGCACCCATTGGATATTCTCTGAGTCTAATTTTAGGTGGTCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS TCA 90 bp | TTTAGCATGCACAGCTGTGAATCCGATGTCGGTGACTGCAGGATGTaGCAGGGCAAAAGGGACACTGATCCACAGTCCTATAAAAATGCA | + |
|
Preference number: 5 (lower is better) Translates to: FSMHSCESDVGDCRM*QGKRDTDPQSYKNA Trigger: TGCATTTTTATAGGACTGTGGATCAGTGTCCCTTTTGCCCTGTCACATCCTGCAGTCACCGACATCGGATTCACAGCTGTGCATGCTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS GCA 90 bp | GGCTTCACTGCGCTCTTCTGGGTTGCCGCTGTTTTTGGTTTTCCATaGAGCCCATATTCCAACCAGAAATATAAGGAGGTAGAAGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GFTALFWVAAVFGFP*SPYSNQKYKEVEED Trigger: ATCCTCTTCTACCTCCTTATATTTCTGGTTGGAATATGGGCTGCATGGAAAACCAAAAACAGCGGCAACCCAGAAGAGCGCAGTGAAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS-3UTR CAA 90 bp | TTCTTGGTGAGGTGTTTGGAAGCTGCTGGTAATAAATATACATTGAACGCATGCCCTCTGGAAGTAGGCTaGCCATGGGATTCCACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FLVRCLEAAGNKYTLNACPLEVG*PWDSTQ Trigger: CTGGGTGGAATCCCATGGCAAGCCTACTTCCAGAGG...GCATGCGTTCAATGTATATTTATTACCAGCAGCTTCCAAACACCTCACCAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS-3UTR CAA 90 bp | GATGGAAGGGCACAGATGATGAGTTGGGCAAAATTCACTCTTTTGTCTTTGTTGCTGCGCTCTTCTGGGTaGCCGCTGTTTTTGGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: DGRAQMMSWAKFTLLSLLLRSSG*PLFLVF Trigger: GAAAACCAAAAACAGCGGCAACCCAGAAGAGCGCAG...CAACAAAGACAAAAGAGTGAATTTTGCCCAACTCATCATCTGTGCCCTTCCATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS-3UTR CAA 90 bp | TTCTTGGTGAGGTGTTTGGAAGCTGCTGGTAATAAATATACATTGAACGCATGCGCAAAGCCATGGCTGTaGCAGATGCTCCGAACACAA | + |
|
Preference number: 5 (lower is better) Translates to: FLVRCLEAAGNKYTLNACAKPWL*QMLRTQ Trigger: TTGTGTTCGGAGCATCTGCAACAGCCATGGCTTTGC...GCATGCGTTCAATGTATATTTATTACCAGCAGCTTCCAAACACCTCACCAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS GCA 90 bp | AGGAGGGCCTCCTTATTGGTGAAAGTTGAACTGAGGGTTAGGCTCTaGCGAGGTTTCACAGGTGCAAGTTCATTTAATTTGATATTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RRASLLVKVELRVRL*RGFTGASSFNLIFS Trigger: TGAAAATATCAAATTAAATGAACTTGCACCTGTGAAACCTCGGCAGAGCCTAACCCTCAGTTCAACTTTCACCAATAAGGAGGCCCTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS-3UTR CAA 90 bp | ATAATAACTGTAACCTATAAAGAGAATTCTAGGGTTTGGGGGCACAAGGTTTGTGGGTTGCCGCTGTTTTaGGTTTTCCATGCAGCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: IITVTYKENSRVWGHKVCGLPLF*VFHAAH Trigger: ATGGGCTGCATGGAAAACCAAAAACAGCGGCAACCC...ACAAACCTTGTGCCCCCAAACCCTAGAATTCTCTTTATAGGTTACAGTTATTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS-3UTR CAA 90 bp | TTCTTGGTGAGGTGTTTGGAAGCTGCTGGTAATAAATATACATTGAACGCATGCTCTCTTCACTGTGCCTaGCGACAACAGCATCAAATA | + |
|
Preference number: 5 (lower is better) Translates to: FLVRCLEAAGNKYTLNACSLHCA*RQQHQI Trigger: TATTTGATGCTGTTGTCGCAAGGCACAGTGAAGAGA...GCATGCGTTCAATGTATATTTATTACCAGCAGCTTCCAAACACCTCACCAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS-3UTR CAA 90 bp | AGACCTTGTGGGTCTGAAATACCATGTTTACCAGAAATTTCATCCTTGTCACTACTGACTAGAATGGTCTaGTCCATGTTCTCTTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: RPCGSEIPCLPEISSLSLLTRMV*SMFSSL Trigger: CAGTGAAGAGAACATGGACAAGACCATTCTAGTCAG...TAGTGACAAGGATGAAATTTCTGGTAAACATGGTATTTCAGACCCACAAGGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS-3UTR CAA 90 bp | TATATTTTAACATGTGTAAGATATGCTCCAAGCCTTTCTTCCAGTACTACCCTAAGGAGGGCCTCCTTATaGGTGAAAGTTGAACTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: YILTCVRYAPSLSSSTTLRRASL*VKVELR Trigger: CCTCAGTTCAACTTTCACCAATAAGGAGGCCCTCCT...TAGGGTAGTACTGGAAGAAAGGCTTGGAGCATATCTTACACATGTTAAAATATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS GCA 90 bp | TTTTCATTTCTGACTAGAATGGTCTTGTCCATGTTCTCTTCACTGTaGCTTGCGACAACAGCATCAAATACATCTAATTTTGGAGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: FSFLTRMVLSMFSSL*LATTASNTSNFGGK Trigger: CTTGCCTCCAAAATTAGATGTATTTGATGCTGTTGTCGCAAGGCACAGTGAAGAGAACATGGACAAGACCATTCTAGTCAGAAATGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS-3UTR CAA 90 bp | TATATTTTAACATGTGTAAGATATGCTCCAAGCCTTTCTTCCAGTACTACCCTAATAGTCACATATCCCTaGGAACGCATAGGTTTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: YILTCVRYAPSLSSSTTLIVTYP*ERIGFA Trigger: TGCGAAACCTATGCGTTCCAAGGGATATGTGACTAT...TAGGGTAGTACTGGAAGAAAGGCTTGGAGCATATCTTACACATGTTAAAATATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS-3UTR CAA 90 bp | TATATTTTAACATGTGTAAGATATGCTCCAAGCCTTTCTTCCAGTACTACCCTAACCCACACAATTTCCTaGTCTGATGCATTTTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: YILTCVRYAPSLSSSTTLTHTIS*SDAFCL Trigger: CAGACAAAATGCATCAGACAAGGAAATTGTGTGGGT...TAGGGTAGTACTGGAAGAAAGGCTTGGAGCATATCTTACACATGTTAAAATATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS-3UTR CAA 90 bp | ATAAGTAATATTTGGCCACCTTCTTTGGCTAGGGCTTTATGCATTTTTATGCACCAAATACATCTAATTTaGGAGGCAAGGTTCCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: ISNIWPPSLARALCIFMHQIHLI*EARFHF Trigger: AAAGTGGAACCTTGCCTCCAAAATTAGATGTATTTG...GTGCATAAAAATGCATAAAGCCCTAGCCAAAGAAGGTGGCCAAATATTACTTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
||
| CDS TCA 72 bp | CACCAACCAACAAACCAATGTCACGGCCCCCGACTATaGTGGCTTCACTGCGCTCTTCTGGGTTGCCGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: HQPTNQCHGPRL*WLHCALLGCRC Trigger: ACAGCGGCAACCCAGAAGAGCGCAGTGAAGCCATCATAGTCGGGGGCCGTGACATTGGTTTGTTGGTTGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS TCA 72 bp | CACAACCTGGCCCATACACTGCTTCTGCTGTCCCATTaGTGTAGCCTCCTCCAACCCAGGTGGCTGTCATGG | + |
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Preference number: 6 (lower is better) Translates to: HNLAHTLLLLSH*CSLLQPRWLSW Trigger: CCATGACAGCCACCTGGGTTGGAGGAGGCTACATCAATGGGACAGCAGAAGCAGTGTATGGGCCAGGTTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS TCA 72 bp | AACTCGCCGACAGGATGGACGAGTCAGCTGAGGACATaGCAGCAGCTGAAACAGCACCAAGCCCAAAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: NSPTGWTSQLRT*QQLKQHQAQRR Trigger: CCTTCTTTGGGCTTGGTGCTGTTTCAGCTGCTGTCATGTCCTCAGCTGACTCGTCCATCCTGTCGGCGAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS GCA 72 bp | GAAAATTGCTGCAGCCCAGAACATCTCTCCCATCAGTaGAGGGATGAAGAGCAGCCCACCCATGCGCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: ENCCSPEHLSHQ*RDEEQPTHALS Trigger: GGAAAGCGCATGGGTGGGCTGCTCTTCATCCCTGCACTGATGGGAGAGATGTTCTGGGCTGCAGCAATTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS CAA 90 bp | CCAGACCCCTCCGGACTGGAATCAACATCAAGGAGGGCCTCCTTATaGGTGAAAGTTGAACTGAGGGTTAGGCTCTGCCGAGGTTTCACA | + |
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Preference number: 6 (lower is better) Translates to: PDPSGLESTSRRASL*VKVELRVRLCRGFT Trigger: TGTGAAACCTCGGCAGAGCCTAACCCTCAGTTCAACTTTCACCAATAAGGAGGCCCTCCTTGATGTTGATTCCAGTCCGGAGGGGTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS GCA 72 bp | TCAATGGTTCCCAGCCAGGGACTCTGGTATTTAGCATaGACAGCTGTGAATCCGATGTCGGTGACTGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: SMVPSQGLWYLA*TAVNPMSVTAG Trigger: TCCTGCAGTCACCGACATCGGATTCACAGCTGTGCATGCTAAATACCAGAGTCCCTGGCTGGGAACCATTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS GCA 72 bp | AGCCCAAAGAAGGAGATGTACACAGGGCAGAGGTACTaGAGAACGATCGGGAGAATCATGTCTGCTTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SPKKEMYTGQRY*RTIGRIMSASS Trigger: GGAGGAAGCAGACATGATTCTCCCGATCGTTCTGCAGTACCTCTGCCCTGTGTACATCTCCTTCTTTGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS GCA 72 bp | CACAGTCTTCGTCAGCAAAGCCATGGCTGTTGCAGATaGTCCGAACACAAGCACAGTGATCCTCATGACCCA | + |
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Preference number: 6 (lower is better) Translates to: HSLRQQSHGCCR*SEHKHSDPHDP Trigger: TGGGTCATGAGGATCACTGTGCTTGTGTTCGGAGCATCTGCAACAGCCATGGCTTTGCTGACGAAGACTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS GCA 72 bp | GCAGAGGTACTGCAGAACGATCGGGAGAATCATGTCTaGTTCCTCCTTAGTCTTGGGATCTGGATACCCGTA | + |
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Preference number: 6 (lower is better) Translates to: AEVLQNDRENHV*FLLSLGIWIPV Trigger: TACGGGTATCCAGATCCCAAGACTAAGGAGGAAGCAGACATGATTCTCCCGATCGTTCTGCAGTACCTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS GCA 72 bp | CCCATACACAGTCTTCGTCAGCAAAGCCATGGCTGTTaGAGATGCTCCGAACACAAGCACAGTGATCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: PIHSLRQQSHGC*RCSEHKHSDPH Trigger: ATGAGGATCACTGTGCTTGTGTTCGGAGCATCTGCAACAGCCATGGCTTTGCTGACGAAGACTGTGTATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS CCA 72 bp | GAGAATCATGTCTGCTTCCTCCTTAGTCTTGGGATCTaGATACCCGTAGGCAGTCTGGTTCCAGTCTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: ENHVCFLLSLGI*IPVGSLVPVCG Trigger: TCCACAGACTGGAACCAGACTGCCTACGGGTATCCAGATCCCAAGACTAAGGAGGAAGCAGACATGATTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS CAA 72 bp | TCCGGACTGGAATCAACATCAAGGAGGGCCTCCTTATaGGTGAAAGTTGAACTGAGGGTTAGGCTCTGCCGA | + |
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Preference number: 6 (lower is better) Translates to: SGLESTSRRASL*VKVELRVRLCR Trigger: TCGGCAGAGCCTAACCCTCAGTTCAACTTTCACCAATAAGGAGGCCCTCCTTGATGTTGATTCCAGTCCGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS CCA 72 bp | ACAGACCACCTAAAATTAGACTCAGAGAATATCCAATaGGTGCCTGAGCCCAAGCTAGACCACAACCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: TDHLKLDSENIQ*VPEPKLDHNLA Trigger: GGCCAGGTTGTGGTCTAGCTTGGGCTCAGGCACCCATTGGATATTCTCTGAGTCTAATTTTAGGTGGTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS CAA 90 bp | CCGACTATGATGGCTTCACTGCGCTCTTCTGGGTTGCCGCTGTTTTaGGTTTTCCATGCAGCCCATATTCCAACCAGAAATATAAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: PTMMASLRSSGLPLF*VFHAAHIPTRNIRR Trigger: CCTCCTTATATTTCTGGTTGGAATATGGGCTGCATGGAAAACCAAAAACAGCGGCAACCCAGAAGAGCGCAGTGAAGCCATCATAGTCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS TCA 72 bp | CCTAAAATTAGACTCAGAGAATATCCAATGGGTGCCTaGGCCCAAGCTAGACCACAACCTGGCCCATACACT | + |
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Preference number: 6 (lower is better) Translates to: PKIRLREYPMGA*AQARPQPGPYT Trigger: AGTGTATGGGCCAGGTTGTGGTCTAGCTTGGGCTCAGGCACCCATTGGATATTCTCTGAGTCTAATTTTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS CCA 72 bp | TGGCTTCACTGCGCTCTTCTGGGTTGCCGCTGTTTTTaGTTTTCCATGCAGCCCATATTCCAACCAGAAATA | + |
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Preference number: 6 (lower is better) Translates to: WLHCALLGCRCF*FSMQPIFQPEI Trigger: TATTTCTGGTTGGAATATGGGCTGCATGGAAAACCAAAAACAGCGGCAACCCAGAAGAGCGCAGTGAAGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS CCA 72 bp | ACTTCAACTGATTCAATGGTTCCCAGCCAGGGACTCTaGTATTTAGCATGCACAGCTGTGAATCCGATGTCG | + |
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Preference number: 6 (lower is better) Translates to: TSTDSMVPSQGL*YLACTAVNPMS Trigger: CGACATCGGATTCACAGCTGTGCATGCTAAATACCAGAGTCCCTGGCTGGGAACCATTGAATCAGTTGAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS CAA 72 bp | ATGGCTTCACTGCGCTCTTCTGGGTTGCCGCTGTTTTaGGTTTTCCATGCAGCCCATATTCCAACCAGAAAT | + |
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Preference number: 6 (lower is better) Translates to: MASLRSSGLPLF*VFHAAHIPTRN Trigger: ATTTCTGGTTGGAATATGGGCTGCATGGAAAACCAAAAACAGCGGCAACCCAGAAGAGCGCAGTGAAGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS GCA 72 bp | TCCTTATTGGTGAAAGTTGAACTGAGGGTTAGGCTCTaGCGAGGTTTCACAGGTGCAAGTTCATTTAATTTG | + |
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Preference number: 6 (lower is better) Translates to: SLLVKVELRVRL*RGFTGASSFNL Trigger: CAAATTAAATGAACTTGCACCTGTGAAACCTCGGCAGAGCCTAACCCTCAGTTCAACTTTCACCAATAAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS CAA 72 bp | CTAGAATGGTCTTGTCCATGTTCTCTTCACTGTGCCTaGCGACAACAGCATCAAATACATCTAATTTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: LEWSCPCSLHCA*RQQHQIHLILE Trigger: CTCCAAAATTAGATGTATTTGATGCTGTTGTCGCAAGGCACAGTGAAGAGAACATGGACAAGACCATTCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS CAA 90 bp | TCTCTTCACTGTGCCTTGCGACAACAGCATCAAATACATCTAATTTaGGAGGCAAGGTTCCACTTTCAAATAGATACTTGGCTAGATAAG | + |
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Preference number: 6 (lower is better) Translates to: SLHCALRQQHQIHLI*EARFHFQIDTWLDK Trigger: CTTATCTAGCCAAGTATCTATTTGAAAGTGGAACCTTGCCTCCAAAATTAGATGTATTTGATGCTGTTGTCGCAAGGCACAGTGAAGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS GCA 72 bp | CTGACTAGAATGGTCTTGTCCATGTTCTCTTCACTGTaGCTTGCGACAACAGCATCAAATACATCTAATTTT | + |
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Preference number: 6 (lower is better) Translates to: LTRMVLSMFSSL*LATTASNTSNF Trigger: AAAATTAGATGTATTTGATGCTGTTGTCGCAAGGCACAGTGAAGAGAACATGGACAAGACCATTCTAGTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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| CDS CAA 72 bp | TGTGCCTTGCGACAACAGCATCAAATACATCTAATTTaGGAGGCAAGGTTCCACTTTCAAATAGATACTTGG | + |
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Preference number: 6 (lower is better) Translates to: CALRQQHQIHLI*EARFHFQIDTW Trigger: CCAAGTATCTATTTGAAAGTGGAACCTTGCCTCCAAAATTAGATGTATTTGATGCTGTTGTCGCAAGGCACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095712.5 |
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