Pregenerated sensors for SLC5A6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006641Ensembl transcript IDs: ENSMUST00000080431.8, ENSMUST00000114668.7, ENSMUST00000200816.2, ENSMUST00000202520.4, ENSMUST00000202556.4, ENSMUST00000202984.2
Found 262 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR-3UTR GCA 90 bp | GAGGGCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCCCTCCGGCTGCTGTCTaGAGCGAGGGCAGAGTTCAC | + |
Preference number: 2 (lower is better) Translates to: EGPEVLPEEGKDRCGKLSPPAAV*SEGRVH Trigger: GTGAACTCTGCCCTCGCTGCAGACAGCAGCCGGAGG...GGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR-3UTR GCA 90 bp | GCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCCCCTCCTCCGGCTGCTGTCTaGAGCGAGGGCAGAGTTCAC | + |
Preference number: 2 (lower is better) Translates to: ALKYCLKRARIDVENCPPPPAAV*SEGRVH Trigger: GTGAACTCTGCCCTCGCTGCAGACAGCAGCCGGAGG...AGGGGGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR-3UTR GCA 90 bp | TCCTGGGGCGGTTGTAAGAAATGCTGTTCCTACTCACTCCAAAGAACCCTGGTCTGTCTCGCCCTTGCATaGCCCCGCTTCCATGGAGGT | + |
Preference number: 2 (lower is better) Translates to: SWGGCKKCCSYSLQRTLVCLALA*PRFHGG Trigger: ACCTCCATGGAAGCGGGGGCATGCAAGGGCGAGACA...GACCAGGGTTCTTTGGAGTGAGTAGGAACAGCATTTCTTACAACCGCCCCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR-3UTR TCA 90 bp | AGGGCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCCAAGCTTGGCAAGGGATaGGGAAAAACTGTCTCGCCC | + |
Preference number: 2 (lower is better) Translates to: RALKYCLKRARIDVENCPKLGKG*GKTVSP Trigger: GGGCGAGACAGTTTTTCCTCATCCCTTGCCAAGCTT...GGGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR-3UTR TCA 90 bp | GCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCCCCTAAGCTTGGCAAGGGATaGGGAAAAACTGTCTCGCCC | + |
Preference number: 2 (lower is better) Translates to: ALKYCLKRARIDVENCPPKLGKG*GKTVSP Trigger: GGGCGAGACAGTTTTTCCTCATCCCTTGCCAAGCTT...AGGGGGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR-3UTR GCA 90 bp | AGACCCAAGGATACCAAAGCCTCCCTCTCAAGAGTCGAGGTAGGTAAGAATGAGTGTCTCGCCCTTGCATaGCCCCGCTTCCATGGAGGT | + |
Preference number: 2 (lower is better) Translates to: RPKDTKASLSRVEVGKNECLALA*PRFHGG Trigger: ACCTCCATGGAAGCGGGGGCATGCAAGGGCGAGACA...CTCATTCTTACCTACCTCGACTCTTGAGAGGGAGGCTTTGGTATCCTTGGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR-3UTR TCA 90 bp | GCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCCCCTAACACACGGAGTGAGTaGGTCATCTCTGCACTACAA | + |
Preference number: 2 (lower is better) Translates to: ALKYCLKRARIDVENCPPNTRSE*VISALQ Trigger: TTGTAGTGCAGAGATGACTCACTCACTCCGTGTGTT...AGGGGGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR-3UTR TCA 90 bp | GAGGGCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCAACACACGGAGTGAGTaGGTCATCTCTGCACTACAA | + |
Preference number: 2 (lower is better) Translates to: EGPEVLPEEGKDRCGKLSNTRSE*VISALQ Trigger: TTGTAGTGCAGAGATGACTCACTCACTCCGTGTGTT...GGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR-3UTR GCA 90 bp | AGGGCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCCGGCGGTTGTAAGAAATaGTGTTCCTACTCACTCCAA | + |
Preference number: 2 (lower is better) Translates to: RALKYCLKRARIDVENCPGGCKK*CSYSLQ Trigger: TTGGAGTGAGTAGGAACAGCATTTCTTACAACCGCC...GGGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR-3UTR GCA 90 bp | GAGGGCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCGGCGGTTGTAAGAAATaGTGTTCCTACTCACTCCAA | + |
Preference number: 2 (lower is better) Translates to: EGPEVLPEEGKDRCGKLSGGCKK*CSYSLQ Trigger: TTGGAGTGAGTAGGAACAGCATTTCTTACAACCGCC...GGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR-3UTR TCA 90 bp | GGAATCACCAGAGGGCTAAAGAGAGCTAGTCAGTCTTGCCAAATCAGGTCCTGGAACACACGGAGTGAGTaGGTCATCTCTGCACTACAA | + |
Preference number: 2 (lower is better) Translates to: GITRGLKRASQSCQIRSWNTRSE*VISALQ Trigger: TTGTAGTGCAGAGATGACTCACTCACTCCGTGTGTT...CCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAGCCCTCTGGTGATTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR-3UTR GCA 90 bp | GGAATCACCAGAGGGCTAAAGAGAGCTAGTCAGTCTTGCCAAATCAGGTCCTGGGGCGGTTGTAAGAAATaGTGTTCCTACTCACTCCAA | + |
Preference number: 2 (lower is better) Translates to: GITRGLKRASQSCQIRSWGGCKK*CSYSLQ Trigger: TTGGAGTGAGTAGGAACAGCATTTCTTACAACCGCC...CCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAGCCCTCTGGTGATTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR-3UTR GCA 90 bp | AAAGCCTCCCTCTCAAGAGTCGAGGTAGGTAAGAATGAGAGAGGACTTGAGTATAGAGCTAGTCAGTCTTaGCAAATCAGGTCCTGGGGC | + |
Preference number: 2 (lower is better) Translates to: KASLSRVEVGKNERGLEYRASQS*QIRSWG Trigger: GCCCCAGGACCTGATTTGGCAAGACTGACTAGCTCT...ATACTCAAGTCCTCTCTCATTCTTACCTACCTCGACTCTTGAGAGGGAGGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR-3UTR TCA 90 bp | GTAGGTAAGAATGAGAGAGGACTTGAGTATTACAGAGAACCCGAAAGACCTCAGAAGCTTGGCAAGGGATaGGGAAAAACTGTCTCGCCC | + |
Preference number: 2 (lower is better) Translates to: VGKNERGLEYYREPERPQKLGKG*GKTVSP Trigger: GGGCGAGACAGTTTTTCCTCATCCCTTGCCAAGCTT...CTGAGGTCTTTCGGGTTCTCTGTAATACTCAAGTCCTCTCTCATTCTTACCTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR-3UTR GCA 90 bp | GAGGGCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCGGTCACTTAATCAAATaGCACCCTTTTCTTAGTGTA | + |
Preference number: 2 (lower is better) Translates to: EGPEVLPEEGKDRCGKLSGHLIK*HPFLSV Trigger: TACACTAAGAAAAGGGTGGCATTTGATTAAGTGACC...GGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGCCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR-3UTR GCA 90 bp | GTAGGTAAGAATGAGAGAGGACTTGAGTATTACAGAGAACCCGAAAGACCTCAGAGAGCTAGTCAGTCTTaGCAAATCAGGTCCTGGGGC | + |
Preference number: 2 (lower is better) Translates to: VGKNERGLEYYREPERPQRASQS*QIRSWG Trigger: GCCCCAGGACCTGATTTGGCAAGACTGACTAGCTCT...CTGAGGTCTTTCGGGTTCTCTGTAATACTCAAGTCCTCTCTCATTCTTACCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR-3UTR TCA 90 bp | GTAGGTAAGAATGAGAGAGGACTTGAGTATTACAGAGAACCCGAAAGACCTCAGGTAGAACACACGGAGTaGGTGAGTCATCTCTGCACT | + |
Preference number: 2 (lower is better) Translates to: VGKNERGLEYYREPERPQVEHTE*VSHLCT Trigger: AGTGCAGAGATGACTCACTCACTCCGTGTGTTCTAC...CTGAGGTCTTTCGGGTTCTCTGTAATACTCAAGTCCTCTCTCATTCTTACCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR-3UTR GCA 90 bp | AACAAAATGCATGAAGAGGAAACTCCCAAAGGAAATAATAGTTGCACAGATGACTGTCTCGCCCTTGCATaGCCCCGCTTCCATGGAGGT | + |
Preference number: 2 (lower is better) Translates to: NKMHEEETPKGNNSCTDDCLALA*PRFHGG Trigger: ACCTCCATGGAAGCGGGGGCATGCAAGGGCGAGACA...GTCATCTGTGCAACTATTATTTCCTTTGGGAGTTTCCTCTTCATGCATTTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR-3UTR TCA 90 bp | GTAGGTAAGAATGAGAGAGGACTTGAGTATTACAGAGAACCCGAAAGACCTCAGAACACACGGAGTGAGTaGGTCATCTCTGCACTACAA | + |
Preference number: 2 (lower is better) Translates to: VGKNERGLEYYREPERPQNTRSE*VISALQ Trigger: TTGTAGTGCAGAGATGACTCACTCACTCCGTGTGTT...CTGAGGTCTTTCGGGTTCTCTGTAATACTCAAGTCCTCTCTCATTCTTACCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR-3UTR GCA 90 bp | AGACCCAAGGATACCAAAGCCTCCCTCTCAAGAGTCGAGGTAGGTAAGAATGAGTGGGATTCTATACCCTaGAAACCAATCCTAAGAGAA | + |
Preference number: 2 (lower is better) Translates to: RPKDTKASLSRVEVGKNEWDSIP*KPILRE Trigger: TTCTCTTAGGATTGGTTTGCAGGGTATAGAATCCCA...CTCATTCTTACCTACCTCGACTCTTGAGAGGGAGGCTTTGGTATCCTTGGGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR-3UTR GCA 90 bp | AGACCCAAGGATACCAAAGCCTCCCTCTCAAGAGTCGAGGTAGGTAAGAATGAGGGTCACTTAATCAAATaGCACCCTTTTCTTAGTGTA | + |
Preference number: 2 (lower is better) Translates to: RPKDTKASLSRVEVGKNEGHLIK*HPFLSV Trigger: TACACTAAGAAAAGGGTGGCATTTGATTAAGTGACC...CTCATTCTTACCTACCTCGACTCTTGAGAGGGAGGCTTTGGTATCCTTGGGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR-3UTR GCA 90 bp | AACAAAATGCATGAAGAGGAAACTCCCAAAGGAAATAATAGTTGCACAGATGACAGGGCCCTGAAGTACTaGCTGAAGAGGGCAAGGATC | + |
Preference number: 2 (lower is better) Translates to: NKMHEEETPKGNNSCTDDRALKY*LKRARI Trigger: GATCCTTGCCCTCTTCAGGCAGTACTTCAGGGCCCT...GTCATCTGTGCAACTATTATTTCCTTTGGGAGTTTCCTCTTCATGCATTTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR-3UTR GCA 90 bp | AAAGCCTCCCTCTCAAGAGTCGAGGTAGGTAAGAATGAGAGAGGACTTGAGTATTGGGATTCTATACCCTaGAAACCAATCCTAAGAGAA | + |
Preference number: 2 (lower is better) Translates to: KASLSRVEVGKNERGLEYWDSIP*KPILRE Trigger: TTCTCTTAGGATTGGTTTGCAGGGTATAGAATCCCA...ATACTCAAGTCCTCTCTCATTCTTACCTACCTCGACTCTTGAGAGGGAGGCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR-3UTR TCA 90 bp | GTAGGTAAGAATGAGAGAGGACTTGAGTATTACAGAGAACCCGAAAGACCTCAGAATGATAAGCCAGGTTaGCATGATAGTGAAGGAATC | + |
Preference number: 2 (lower is better) Translates to: VGKNERGLEYYREPERPQNDKPG*HDSEGI Trigger: GATTCCTTCACTATCATGTCAACCTGGCTTATCATT...CTGAGGTCTTTCGGGTTCTCTGTAATACTCAAGTCCTCTCTCATTCTTACCTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR-3UTR GCA 90 bp | GTTCCTACTCACTCCAAAGAACCCTGGTCACTTAATCAAATGCCACCCTTTTCTTGGGATTCTATACCCTaGAAACCAATCCTAAGAGAA | + |
Preference number: 2 (lower is better) Translates to: VPTHSKEPWSLNQMPPFSWDSIP*KPILRE Trigger: TTCTCTTAGGATTGGTTTGCAGGGTATAGAATCCCA...AGAAAAGGGTGGCATTTGATTAAGTGACCAGGGTTCTTTGGAGTGAGTAGGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR-3UTR GCA 90 bp | TTCCTACTCACTCCAAAGAACCCTGGTCACTTAATCAAATGCCACCCTTTTCTTTGGGATTCTATACCCTaGAAACCAATCCTAAGAGAA | + |
Preference number: 2 (lower is better) Translates to: FLLTPKNPGHLIKCHPFLWDSIP*KPILRE Trigger: TTCTCTTAGGATTGGTTTGCAGGGTATAGAATCCCA...AAGAAAAGGGTGGCATTTGATTAAGTGACCAGGGTTCTTTGGAGTGAGTAGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR-3UTR GCA 90 bp | GTAGGTAAGAATGAGAGAGGACTTGAGTATTACAGAGAACCCGAAAGACCTCAGGGTCACTTAATCAAATaGCACCCTTTTCTTAGTGTA | + |
Preference number: 2 (lower is better) Translates to: VGKNERGLEYYREPERPQGHLIK*HPFLSV Trigger: TACACTAAGAAAAGGGTGGCATTTGATTAAGTGACC...CTGAGGTCTTTCGGGTTCTCTGTAATACTCAAGTCCTCTCTCATTCTTACCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR-3UTR TCA 90 bp | AACAAAATGCATGAAGAGGAAACTCCCAAAGGAAATAATAGTTGCACAGATGACAATGATAAGCCAGGTTaGCATGATAGTGAAGGAATC | + |
Preference number: 2 (lower is better) Translates to: NKMHEEETPKGNNSCTDDNDKPG*HDSEGI Trigger: GATTCCTTCACTATCATGTCAACCTGGCTTATCATT...GTCATCTGTGCAACTATTATTTCCTTTGGGAGTTTCCTCTTCATGCATTTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR GCA 72 bp | AGTGAGTCATCTCTGCACTACAAAATAGCCTCCGGCTaGTGTCTGCAGCGAGGGCAGAGTTCACGCCCCAGG | + |
Preference number: 3 (lower is better) Translates to: SESSLHYKIASG*CLQRGQSSRPR Trigger: CCTGGGGCGTGAACTCTGCCCTCGCTGCAGACAGCAGCCGGAGGCTATTTTGTAGTGCAGAGATGACTCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR-3UTR CAA 90 bp | TCCTGGGGCGGTTGTAAGAAATGCTGTTCCTACTCACTCCAAAGAACCCTGGTCAAAACTGTCTCGCCCTaGCATGCCCCCGCTTCCATG | + |
Preference number: 3 (lower is better) Translates to: SWGGCKKCCSYSLQRTLVKTVSP*HAPASM Trigger: CATGGAAGCGGGGGCATGCAAGGGCGAGACAGTTTT...GACCAGGGTTCTTTGGAGTGAGTAGGAACAGCATTTCTTACAACCGCCCCAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR-3UTR CAA 90 bp | GAGGGCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCAGAATGAGAGAGGACTaGAGTATTACAGAGAACCCG | + |
Preference number: 3 (lower is better) Translates to: EGPEVLPEEGKDRCGKLSRMRED*SITENP Trigger: CGGGTTCTCTGTAATACTCAAGTCCTCTCTCATTCT...GGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR GCA 72 bp | GGAATCACCAGAGGGCTAAAGAGAGCTAGTCAGTCTTaGCAAATCAGGTCCTGGGGCGGTTGTAAGAAATGC | + |
Preference number: 3 (lower is better) Translates to: GITRGLKRASQS*QIRSWGGCKKC Trigger: GCATTTCTTACAACCGCCCCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAGCCCTCTGGTGATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR-3UTR CAA 90 bp | GTAGGTAAGAATGAGAGAGGACTTGAGTATTACAGAGAACCCGAAAGACCTCAGAAAACTGTCTCGCCCTaGCATGCCCCCGCTTCCATG | + |
Preference number: 3 (lower is better) Translates to: VGKNERGLEYYREPERPQKTVSP*HAPASM Trigger: CATGGAAGCGGGGGCATGCAAGGGCGAGACAGTTTT...CTGAGGTCTTTCGGGTTCTCTGTAATACTCAAGTCCTCTCTCATTCTTACCTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR-3UTR CAA 90 bp | AGGGCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCCAATCCTAAGAGAAGCTaGGCAAGGGATGAGGAAAAA | + |
Preference number: 3 (lower is better) Translates to: RALKYCLKRARIDVENCPNPKRS*ARDEEK Trigger: TTTTTCCTCATCCCTTGCCAAGCTTCTCTTAGGATT...GGGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR CCA 72 bp | CTAAAGAGAGCTAGTCAGTCTTGCCAAATCAGGTCCTaGGGCGGTTGTAAGAAATGCTGTTCCTACTCACTC | + |
Preference number: 3 (lower is better) Translates to: LKRASQSCQIRS*GGCKKCCSYSL Trigger: GAGTGAGTAGGAACAGCATTTCTTACAACCGCCCCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR CCA 72 bp | GATTCTATACCCTGCAAACCAATCCTAAGAGAAGCTTaGCAAGGGATGAGGAAAAACTGTCTCGCCCTTGCA | + |
Preference number: 3 (lower is better) Translates to: DSIPCKPILREA*QGMRKNCLALA Trigger: TGCAAGGGCGAGACAGTTTTTCCTCATCCCTTGCCAAGCTTCTCTTAGGATTGGTTTGCAGGGTATAGAATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR-3UTR CAA 90 bp | AACAAAATGCATGAAGAGGAAACTCCCAAAGGAAATAATAGTTGCACAGATGACAAAACTGTCTCGCCCTaGCATGCCCCCGCTTCCATG | + |
Preference number: 3 (lower is better) Translates to: NKMHEEETPKGNNSCTDDKTVSP*HAPASM Trigger: CATGGAAGCGGGGGCATGCAAGGGCGAGACAGTTTT...GTCATCTGTGCAACTATTATTTCCTTTGGGAGTTTCCTCTTCATGCATTTTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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3UTR-3UTR CAA 90 bp | GTTCCTACTCACTCCAAAGAACCCTGGTCACTTAATCAAATGCCACCCTTTTCTAATCCTAAGAGAAGCTaGGCAAGGGATGAGGAAAAA | + |
Preference number: 3 (lower is better) Translates to: VPTHSKEPWSLNQMPPFSNPKRS*ARDEEK Trigger: TTTTTCCTCATCCCTTGCCAAGCTTCTCTTAGGATT...AGAAAAGGGTGGCATTTGATTAAGTGACCAGGGTTCTTTGGAGTGAGTAGGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | AGGGCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCCCAGGATGGCCACGGCTaGCTGGAAGGTGGCCAGCAA | + |
Preference number: 4 (lower is better) Translates to: RALKYCLKRARIDVENCPQDGHG*LEGGQQ Trigger: TTGCTGGCCACCTTCCAGTCAGCCGTGGCCATCCTG...GGGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | CTACAAAATAGCCTCCGGCTGCTGTCTGCAGCGAGGGCAGAGTTCACGCCCCAGGGCCTCGAGAAAGCATaGTGGCCCGAGTTTCAGTCA | + |
Preference number: 4 (lower is better) Translates to: LQNSLRLLSAARAEFTPQGLEKA*WPEFQS Trigger: TGACTGAAACTCGGGCCATCATGCTTTCTCGAGGCC...CTGGGGCGTGAACTCTGCCCTCGCTGCAGACAGCAGCCGGAGGCTATTTTGTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | CTACAAAATAGCCTCCGGCTGCTGTCTGCAGCGAGGGCAGAGTTCACGCCCCAGGAGCCTGAGGTTGTATaGAAGGGAGCTGCAGTGCTC | + |
Preference number: 4 (lower is better) Translates to: LQNSLRLLSAARAEFTPQEPEVV*KGAAVL Trigger: GAGCACTGCAGCTCCCTTCCATACAACCTCAGGCTC...CTGGGGCGTGAACTCTGCCCTCGCTGCAGACAGCAGCCGGAGGCTATTTTGTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | GCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCCCCTCTGGTGCTCCCAGGATaGCCACGGCTGACTGGAAGG | + |
Preference number: 4 (lower is better) Translates to: ALKYCLKRARIDVENCPPLVLPG*PRLTGR Trigger: CCTTCCAGTCAGCCGTGGCCATCCTGGGAGCACCAG...AGGGGGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | CTACAAAATAGCCTCCGGCTGCTGTCTGCAGCGAGGGCAGAGTTCACGCCCCAGGAAGAGTCCCAGCAGTaGCCCTCCAACCATGCCAAA | + |
Preference number: 4 (lower is better) Translates to: LQNSLRLLSAARAEFTPQEESQQ*PSNHAK Trigger: TTTGGCATGGTTGGAGGGCCACTGCTGGGACTCTTC...CTGGGGCGTGAACTCTGCCCTCGCTGCAGACAGCAGCCGGAGGCTATTTTGTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | CTACAAAATAGCCTCCGGCTGCTGTCTGCAGCGAGGGCAGAGTTCACGCCCCAGATCCAGTCACTGCATTaGGGGCCAAGGATGGTGCAT | + |
Preference number: 4 (lower is better) Translates to: LQNSLRLLSAARAEFTPQIQSLH*GPRMVH Trigger: ATGCACCATCCTTGGCCCTCAATGCAGTGACTGGAT...CTGGGGCGTGAACTCTGCCCTCGCTGCAGACAGCAGCCGGAGGCTATTTTGTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | GCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCCCCTTCTCCGAGTGGGAACTaGGGTAGCGCTGCACCTGAG | + |
Preference number: 4 (lower is better) Translates to: ALKYCLKRARIDVENCPPSPSGN*GSAAPE Trigger: CTCAGGTGCAGCGCTACCTCAGTTCCCACTCGGAGA...AGGGGGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | AGGGCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCCATGGCCACGGCTGACTaGAAGGTGGCCAGCAAGGAC | + |
Preference number: 4 (lower is better) Translates to: RALKYCLKRARIDVENCPMATAD*KVASKD Trigger: GTCCTTGCTGGCCACCTTCCAGTCAGCCGTGGCCAT...GGGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR GCA 90 bp | GAGGGCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCGGCCAGCAAGGACAGTaGCACAGGAAGACAGCCCAT | + |
Preference number: 4 (lower is better) Translates to: EGPEVLPEEGKDRCGKLSGQQGQ*HRKTAH Trigger: ATGGGCTGTCTTCCTGTGGCACTGTCCTTGCTGGCC...GGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR GCA 90 bp | GTGAGTGAGTCATCTCTGCACTACAAAATAGCCTCCGGCTGCTGTCTGCAGCGATGGTCAGGGGCTGCTTaGTTCAGCTCGGGGCTCATG | + |
Preference number: 4 (lower is better) Translates to: VSESSLHYKIASGCCLQRWSGAA*FSSGLM Trigger: CATGAGCCCCGAGCTGAAGCAAGCAGCCCCTGACCA...TCGCTGCAGACAGCAGCCGGAGGCTATTTTGTAGTGCAGAGATGACTCACTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | AGGGCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCCTCACCAACGGTATGGTaGCCCCAGCCACGACAAGCA | + |
Preference number: 4 (lower is better) Translates to: RALKYCLKRARIDVENCPSPTVW*PQPRQA Trigger: TGCTTGTCGTGGCTGGGGCCACCATACCGTTGGTGA...GGGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | AGGGCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCCTCGGAAGATCTCAGCTaGTGCTCCCAGGATGGCCAC | + |
Preference number: 4 (lower is better) Translates to: RALKYCLKRARIDVENCPSEDLS*CSQDGH Trigger: GTGGCCATCCTGGGAGCACCAGCTGAGATCTTCCGA...GGGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | ACCAGAGGGCTAAAGAGAGCTAGTCAGTCTTGCCAAATCAGGTCCTGGGGCGGTCGGCGACAGTTACATTaGCAGGCAGGAAGGAGCTGG | + |
Preference number: 4 (lower is better) Translates to: TRGLKRASQSCQIRSWGGRRQLH*QAGRSW Trigger: CCAGCTCCTTCCTGCCTGCCAATGTAACTGTCGCCG...ACCGCCCCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAGCCCTCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | GGAATCACCAGAGGGCTAAAGAGAGCTAGTCAGTCTTGCCAAATCAGGTCCTGGTCTCCGAGTGGGAACTaGGGTAGCGCTGCACCTGAG | + |
Preference number: 4 (lower is better) Translates to: GITRGLKRASQSCQIRSWSPSGN*GSAAPE Trigger: CTCAGGTGCAGCGCTACCTCAGTTCCCACTCGGAGA...CCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAGCCCTCTGGTGATTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | ACCAGAGGGCTAAAGAGAGCTAGTCAGTCTTGCCAAATCAGGTCCTGGGGCGGTGGCCTCGAGAAAGCATaGTGGCCCGAGTTTCAGTCA | + |
Preference number: 4 (lower is better) Translates to: TRGLKRASQSCQIRSWGGGLEKA*WPEFQS Trigger: TGACTGAAACTCGGGCCATCATGCTTTCTCGAGGCC...ACCGCCCCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAGCCCTCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | ACCAGAGGGCTAAAGAGAGCTAGTCAGTCTTGCCAAATCAGGTCCTGGGGCGGTTCAGGCCCACTACAATaGCTGTGGTGGAGTTGTGCG | + |
Preference number: 4 (lower is better) Translates to: TRGLKRASQSCQIRSWGGSGPLQ*LWWSCA Trigger: CGCACAACTCCACCACAGTCATTGTAGTGGGCCTGA...ACCGCCCCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAGCCCTCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR GCA 90 bp | ACCAGAGGGCTAAAGAGAGCTAGTCAGTCTTGCCAAATCAGGTCCTGGGGCGGTCTGGCAAGGGAACACTaGATAGCAGGAGAGCACAGC | + |
Preference number: 4 (lower is better) Translates to: TRGLKRASQSCQIRSWGGLAREH*IAGEHS Trigger: GCTGTGCTCTCCTGCTATGCAGTGTTCCCTTGCCAG...ACCGCCCCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAGCCCTCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR GCA 90 bp | GAGGGCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCATGCAGAGGGCCACTTaGTGGCAAGGGAACACTGCA | + |
Preference number: 4 (lower is better) Translates to: EGPEVLPEEGKDRCGKLSMQRAT*WQGNTA Trigger: TGCAGTGTTCCCTTGCCAGCAAGTGGCCCTCTGCAT...GGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR GCA 90 bp | GGAATCACCAGAGGGCTAAAGAGAGCTAGTCAGTCTTGCCAAATCAGGTCCTGGTGGTCAGGGGCTGCTTaGTTCAGCTCGGGGCTCATG | + |
Preference number: 4 (lower is better) Translates to: GITRGLKRASQSCQIRSWWSGAA*FSSGLM Trigger: CATGAGCCCCGAGCTGAAGCAAGCAGCCCCTGACCA...CCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAGCCCTCTGGTGATTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | GCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCCCCTAGTTCACCAACGGTATaGTGGCCCCAGCCACGACAA | + |
Preference number: 4 (lower is better) Translates to: ALKYCLKRARIDVENCPPSSPTV*WPQPRQ Trigger: TTGTCGTGGCTGGGGCCACCATACCGTTGGTGAACT...AGGGGGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | GGAATCACCAGAGGGCTAAAGAGAGCTAGTCAGTCTTGCCAAATCAGGTCCTGGATGGCCACGGCTGACTaGAAGGTGGCCAGCAAGGAC | + |
Preference number: 4 (lower is better) Translates to: GITRGLKRASQSCQIRSWMATAD*KVASKD Trigger: GTCCTTGCTGGCCACCTTCCAGTCAGCCGTGGCCAT...CCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAGCCCTCTGGTGATTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | AGACCCAAGGATACCAAAGCCTCCCTCTCAAGAGTCGAGGTAGGTAAGAATGAGCTGGTGCTCCCAGGATaGCCACGGCTGACTGGAAGG | + |
Preference number: 4 (lower is better) Translates to: RPKDTKASLSRVEVGKNELVLPG*PRLTGR Trigger: CCTTCCAGTCAGCCGTGGCCATCCTGGGAGCACCAG...CTCATTCTTACCTACCTCGACTCTTGAGAGGGAGGCTTTGGTATCCTTGGGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | GGAATCACCAGAGGGCTAAAGAGAGCTAGTCAGTCTTGCCAAATCAGGTCCTGGGAGCCCAGGCAGCCCTaGCATGTCTTTCAGGAGGTC | + |
Preference number: 4 (lower is better) Translates to: GITRGLKRASQSCQIRSWEPRQP*HVFQEV Trigger: GACCTCCTGAAAGACATGCCAGGGCTGCCTGGGCTC...CCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAGCCCTCTGGTGATTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | ACCAGAGGGCTAAAGAGAGCTAGTCAGTCTTGCCAAATCAGGTCCTGGGGCGGTTGTGGGAACCAGGGCTaGATCAGGTCTTCCATCGTG | + |
Preference number: 4 (lower is better) Translates to: TRGLKRASQSCQIRSWGGCGNQG*IRSSIV Trigger: CACGATGGAAGACCTGATCCAGCCCTGGTTCCCACA...ACCGCCCCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAGCCCTCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | CTACAAAATAGCCTCCGGCTGCTGTCTGCAGCGAGGGCAGAGTTCACGCCCCAGTCTCTGGAAACAGGTTaGGGATCACAGGGATATCCT | + |
Preference number: 4 (lower is better) Translates to: LQNSLRLLSAARAEFTPQSLETG*GSQGYP Trigger: AGGATATCCCTGTGATCCCCAACCTGTTTCCAGAGA...CTGGGGCGTGAACTCTGCCCTCGCTGCAGACAGCAGCCGGAGGCTATTTTGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | ACCAGAGGGCTAAAGAGAGCTAGTCAGTCTTGCCAAATCAGGTCCTGGGGCGGTCATGATAGAGCCCAATaGCAAGGGAGAGGACCAGCA | + |
Preference number: 4 (lower is better) Translates to: TRGLKRASQSCQIRSWGGHDRAQ*QGRGPA Trigger: TGCTGGTCCTCTCCCTTGTCATTGGGCTCTATCATG...ACCGCCCCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAGCCCTCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | TCCTGGGGCGGTTGTAAGAAATGCTGTTCCTACTCACTCCAAAGAACCCTGGTCACAGGGATGAAGATGTaGGCAGGGATCAGGAGCCCC | + |
Preference number: 4 (lower is better) Translates to: SWGGCKKCCSYSLQRTLVTGMKM*AGIRSP Trigger: GGGGCTCCTGATCCCTGCTCACATCTTCATCCCTGT...GACCAGGGTTCTTTGGAGTGAGTAGGAACAGCATTTCTTACAACCGCCCCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | ACCAGAGGGCTAAAGAGAGCTAGTCAGTCTTGCCAAATCAGGTCCTGGGGCGGTATCCAGTCACTGCATTaGGGGCCAAGGATGGTGCAT | + |
Preference number: 4 (lower is better) Translates to: TRGLKRASQSCQIRSWGGIQSLH*GPRMVH Trigger: ATGCACCATCCTTGGCCCTCAATGCAGTGACTGGAT...ACCGCCCCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAGCCCTCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | GAGGGCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCATCCAGTCACTGCATTaGGGGCCAAGGATGGTGCAT | + |
Preference number: 4 (lower is better) Translates to: EGPEVLPEEGKDRCGKLSIQSLH*GPRMVH Trigger: ATGCACCATCCTTGGCCCTCAATGCAGTGACTGGAT...GGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | ACCAGAGGGCTAAAGAGAGCTAGTCAGTCTTGCCAAATCAGGTCCTGGGGCGGTGCTGCCCGAGGAACATaGCCAGTGTTTGGAACACAT | + |
Preference number: 4 (lower is better) Translates to: TRGLKRASQSCQIRSWGGAARGT*PVFGTH Trigger: ATGTGTTCCAAACACTGGTCATGTTCCTCGGGCAGC...ACCGCCCCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAGCCCTCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | GCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCCCCTTGCTGCCTGGAGCACTaGTCCCAGATGAGAGGAAAT | + |
Preference number: 4 (lower is better) Translates to: ALKYCLKRARIDVENCPPCCLEH*SQMRGN Trigger: ATTTCCTCTCATCTGGGATCAGTGCTCCAGGCAGCA...AGGGGGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR GCA 90 bp | ACCAGAGGGCTAAAGAGAGCTAGTCAGTCTTGCCAAATCAGGTCCTGGGGCGGTGCCCATTTTGCGGTCTaGCATCAGCAGTTCACCAAC | + |
Preference number: 4 (lower is better) Translates to: TRGLKRASQSCQIRSWGGAHFAV*HQQFTN Trigger: GTTGGTGAACTGCTGATGGCAGACCGCAAAATGGGC...ACCGCCCCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAGCCCTCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR GCA 90 bp | GGAATCACCAGAGGGCTAAAGAGAGCTAGTCAGTCTTGCCAAATCAGGTCCTGGGGCCAGCAAGGACAGTaGCACAGGAAGACAGCCCAT | + |
Preference number: 4 (lower is better) Translates to: GITRGLKRASQSCQIRSWGQQGQ*HRKTAH Trigger: ATGGGCTGTCTTCCTGTGGCACTGTCCTTGCTGGCC...CCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAGCCCTCTGGTGATTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR GCA 90 bp | AGACCCAAGGATACCAAAGCCTCCCTCTCAAGAGTCGAGGTAGGTAAGAATGAGGAAGATCTCAGCTGGTaGTCCCAGGATGGCCACGGC | + |
Preference number: 4 (lower is better) Translates to: RPKDTKASLSRVEVGKNEEDLSW*SQDGHG Trigger: GCCGTGGCCATCCTGGGAGCACCAGCTGAGATCTTC...CTCATTCTTACCTACCTCGACTCTTGAGAGGGAGGCTTTGGTATCCTTGGGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR GCA 90 bp | ACCAATCCTAAGAGAAGCTTGGCAAGGGATGAGGAAAAACTGTCTCGCCCTTGCGAAGATCTCAGCTGGTaGTCCCAGGATGGCCACGGC | + |
Preference number: 4 (lower is better) Translates to: TNPKRSLARDEEKLSRPCEDLSW*SQDGHG Trigger: GCCGTGGCCATCCTGGGAGCACCAGCTGAGATCTTC...GCAAGGGCGAGACAGTTTTTCCTCATCCCTTGCCAAGCTTCTCTTAGGATTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR GCA 90 bp | GAGGGCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCCTTCAGCCCACCCAGTaGAGTGTAGATGTTGCAGAC | + |
Preference number: 4 (lower is better) Translates to: EGPEVLPEEGKDRCGKLSLQPTQ*SVDVAD Trigger: GTCTGCAACATCTACACTGCACTGGGTGGGCTGAAG...GGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR GCA 90 bp | ACCAGAGGGCTAAAGAGAGCTAGTCAGTCTTGCCAAATCAGGTCCTGGGGCGGTCTTCAGCCCACCCAGTaGAGTGTAGATGTTGCAGAC | + |
Preference number: 4 (lower is better) Translates to: TRGLKRASQSCQIRSWGGLQPTQ*SVDVAD Trigger: GTCTGCAACATCTACACTGCACTGGGTGGGCTGAAG...ACCGCCCCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAGCCCTCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR GCA 90 bp | AGGGCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCCATTAAGGGGAGGGGGTaGCACAGCAGAACTCATCCT | + |
Preference number: 4 (lower is better) Translates to: RALKYCLKRARIDVENCPIKGRG*HSRTHP Trigger: AGGATGAGTTCTGCTGTGGCACCCCCTCCCCTTAAT...GGGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR GCA 90 bp | ACCAGAGGGCTAAAGAGAGCTAGTCAGTCTTGCCAAATCAGGTCCTGGGGCGGTATTAAGGGGAGGGGGTaGCACAGCAGAACTCATCCT | + |
Preference number: 4 (lower is better) Translates to: TRGLKRASQSCQIRSWGGIKGRG*HSRTHP Trigger: AGGATGAGTTCTGCTGTGGCACCCCCTCCCCTTAAT...ACCGCCCCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAGCCCTCTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | GTGAGTGAGTCATCTCTGCACTACAAAATAGCCTCCGGCTGCTGTCTGCAGCGAGAGCCTGAGGTTGTATaGAAGGGAGCTGCAGTGCTC | + |
Preference number: 4 (lower is better) Translates to: VSESSLHYKIASGCCLQREPEVV*KGAAVL Trigger: GAGCACTGCAGCTCCCTTCCATACAACCTCAGGCTC...TCGCTGCAGACAGCAGCCGGAGGCTATTTTGTAGTGCAGAGATGACTCACTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | ACCAATCCTAAGAGAAGCTTGGCAAGGGATGAGGAAAAACTGTCTCGCCCTTGCATGGCCACGGCTGACTaGAAGGTGGCCAGCAAGGAC | + |
Preference number: 4 (lower is better) Translates to: TNPKRSLARDEEKLSRPCMATAD*KVASKD Trigger: GTCCTTGCTGGCCACCTTCCAGTCAGCCGTGGCCAT...GCAAGGGCGAGACAGTTTTTCCTCATCCCTTGCCAAGCTTCTCTTAGGATTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | ACCAGAGGGCTAAAGAGAGCTAGTCAGTCTTGCCAAATCAGGTCCTGGGGCGGTGTCACATTCCATACATaGCCCAAGCCACCCACTCTG | + |
Preference number: 4 (lower is better) Translates to: TRGLKRASQSCQIRSWGGVTFHT*PKPPTL Trigger: CAGAGTGGGTGGCTTGGGCCATGTATGGAATGTGAC...ACCGCCCCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAGCCCTCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | AGGGCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCCGTCACATTCCATACATaGCCCAAGCCACCCACTCTG | + |
Preference number: 4 (lower is better) Translates to: RALKYCLKRARIDVENCPVTFHT*PKPPTL Trigger: CAGAGTGGGTGGCTTGGGCCATGTATGGAATGTGAC...GGGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | GAGGGCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCGTCACATTCCATACATaGCCCAAGCCACCCACTCTG | + |
Preference number: 4 (lower is better) Translates to: EGPEVLPEEGKDRCGKLSVTFHT*PKPPTL Trigger: CAGAGTGGGTGGCTTGGGCCATGTATGGAATGTGAC...GGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | ACCAATCCTAAGAGAAGCTTGGCAAGGGATGAGGAAAAACTGTCTCGCCCTTGCACAGGGATGAAGATGTaGGCAGGGATCAGGAGCCCC | + |
Preference number: 4 (lower is better) Translates to: TNPKRSLARDEEKLSRPCTGMKM*AGIRSP Trigger: GGGGCTCCTGATCCCTGCTCACATCTTCATCCCTGT...GCAAGGGCGAGACAGTTTTTCCTCATCCCTTGCCAAGCTTCTCTTAGGATTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | GAGGGCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCACAAGGAGAGCATCATaGAGACACCTCCAAAGGCCA | + |
Preference number: 4 (lower is better) Translates to: EGPEVLPEEGKDRCGKLSTRRAS*RHLQRP Trigger: TGGCCTTTGGAGGTGTCTTCATGATGCTCTCCTTGT...GGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | ACCAGAGGGCTAAAGAGAGCTAGTCAGTCTTGCCAAATCAGGTCCTGGGGCGGTACAAGGAGAGCATCATaGAGACACCTCCAAAGGCCA | + |
Preference number: 4 (lower is better) Translates to: TRGLKRASQSCQIRSWGGTRRAS*RHLQRP Trigger: TGGCCTTTGGAGGTGTCTTCATGATGCTCTCCTTGT...ACCGCCCCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAGCCCTCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR GCA 90 bp | GCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCCCCTGAAGACAGCCCATTTTaGGGTCTGCCATCAGCAGTT | + |
Preference number: 4 (lower is better) Translates to: ALKYCLKRARIDVENCPPEDSPF*GLPSAV Trigger: AACTGCTGATGGCAGACCGCAAAATGGGCTGTCTTC...AGGGGGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR GCA 90 bp | AGACCCAAGGATACCAAAGCCTCCCTCTCAAGAGTCGAGGTAGGTAAGAATGAGGGCCAGCAAGGACAGTaGCACAGGAAGACAGCCCAT | + |
Preference number: 4 (lower is better) Translates to: RPKDTKASLSRVEVGKNEGQQGQ*HRKTAH Trigger: ATGGGCTGTCTTCCTGTGGCACTGTCCTTGCTGGCC...CTCATTCTTACCTACCTCGACTCTTGAGAGGGAGGCTTTGGTATCCTTGGGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR GCA 90 bp | AGGGCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCCATGATCACTACCAGCTaGCCGAGGAACATGACCAGT | + |
Preference number: 4 (lower is better) Translates to: RALKYCLKRARIDVENCPMITTS*PRNMTS Trigger: ACTGGTCATGTTCCTCGGGCAGCTGGTAGTGATCAT...GGGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR GCA 90 bp | GGAATCACCAGAGGGCTAAAGAGAGCTAGTCAGTCTTGCCAAATCAGGTCCTGGCTGGCAAGGGAACACTaGATAGCAGGAGAGCACAGC | + |
Preference number: 4 (lower is better) Translates to: GITRGLKRASQSCQIRSWLAREH*IAGEHS Trigger: GCTGTGCTCTCCTGCTATGCAGTGTTCCCTTGCCAG...CCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAGCCCTCTGGTGATTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR GCA 90 bp | GAGGGCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCTTACTATGCTCCCAATaGCGATCCAGAAGGCCATGG | + |
Preference number: 4 (lower is better) Translates to: EGPEVLPEEGKDRCGKLSLLCSQ*RSRRPW Trigger: CCATGGCCTTCTGGATCGGCATTGGGAGCATAGTAA...GGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR GCA 90 bp | GCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCCCCTTTACTATGCTCCCAATaGCGATCCAGAAGGCCATGG | + |
Preference number: 4 (lower is better) Translates to: ALKYCLKRARIDVENCPPLLCSQ*RSRRPW Trigger: CCATGGCCTTCTGGATCGGCATTGGGAGCATAGTAA...AGGGGGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | ACCAGAGGGCTAAAGAGAGCTAGTCAGTCTTGCCAAATCAGGTCCTGGGGCGGTATTGAGGGCCAAGGATaGTGCATAGAGAGCAACTCC | + |
Preference number: 4 (lower is better) Translates to: TRGLKRASQSCQIRSWGGIEGQG*CIESNS Trigger: GGAGTTGCTCTCTATGCACCATCCTTGGCCCTCAAT...ACCGCCCCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAGCCCTCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | ACCAGAGGGCTAAAGAGAGCTAGTCAGTCTTGCCAAATCAGGTCCTGGGGCGGTAGTTTCAGTCAACTGTaGGAACCAGGGCTGGATCAG | + |
Preference number: 4 (lower is better) Translates to: TRGLKRASQSCQIRSWGGSFSQL*EPGLDQ Trigger: CTGATCCAGCCCTGGTTCCCACAGTTGACTGAAACT...ACCGCCCCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAGCCCTCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | AGGGCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCCAGTTTCAGTCAACTGTaGGAACCAGGGCTGGATCAG | + |
Preference number: 4 (lower is better) Translates to: RALKYCLKRARIDVENCPSFSQL*EPGLDQ Trigger: CTGATCCAGCCCTGGTTCCCACAGTTGACTGAAACT...GGGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | GCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCCCCTATCACAGGGATATCCTaGCTGTGGCTTCTCCAGCAA | + |
Preference number: 4 (lower is better) Translates to: ALKYCLKRARIDVENCPPITGIS*LWLLQQ Trigger: TTGCTGGAGAAGCCACAGCCAGGATATCCCTGTGAT...AGGGGGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | ACCAGAGGGCTAAAGAGAGCTAGTCAGTCTTGCCAAATCAGGTCCTGGGGCGGTATCACAGGGATATCCTaGCTGTGGCTTCTCCAGCAA | + |
Preference number: 4 (lower is better) Translates to: TRGLKRASQSCQIRSWGGITGIS*LWLLQQ Trigger: TTGCTGGAGAAGCCACAGCCAGGATATCCCTGTGAT...ACCGCCCCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAGCCCTCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | TCCTGGGGCGGTTGTAAGAAATGCTGTTCCTACTCACTCCAAAGAACCCTGGTCCATGATAGAGCCCAATaGCAAGGGAGAGGACCAGCA | + |
Preference number: 4 (lower is better) Translates to: SWGGCKKCCSYSLQRTLVHDRAQ*QGRGPA Trigger: TGCTGGTCCTCTCCCTTGTCATTGGGCTCTATCATG...GACCAGGGTTCTTTGGAGTGAGTAGGAACAGCATTTCTTACAACCGCCCCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | GAGGGCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCTCACCATCTGAAAGATaGAGGTCACAGTCCCACAGA | + |
Preference number: 4 (lower is better) Translates to: EGPEVLPEEGKDRCGKLSSPSER*RSQSHR Trigger: TCTGTGGGACTGTGACCTTCATCTTTCAGATGGTGA...GGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | TCCTGGGGCGGTTGTAAGAAATGCTGTTCCTACTCACTCCAAAGAACCCTGGTCGCTGCCCGAGGAACATaGCCAGTGTTTGGAACACAT | + |
Preference number: 4 (lower is better) Translates to: SWGGCKKCCSYSLQRTLVAARGT*PVFGTH Trigger: ATGTGTTCCAAACACTGGTCATGTTCCTCGGGCAGC...GACCAGGGTTCTTTGGAGTGAGTAGGAACAGCATTTCTTACAACCGCCCCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | AAAGCCTCCCTCTCAAGAGTCGAGGTAGGTAAGAATGAGAGAGGACTTGAGTATTCTCCGAGTGGGAACTaGGGTAGCGCTGCACCTGAG | + |
Preference number: 4 (lower is better) Translates to: KASLSRVEVGKNERGLEYSPSGN*GSAAPE Trigger: CTCAGGTGCAGCGCTACCTCAGTTCCCACTCGGAGA...ATACTCAAGTCCTCTCTCATTCTTACCTACCTCGACTCTTGAGAGGGAGGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | AGACCCAAGGATACCAAAGCCTCCCTCTCAAGAGTCGAGGTAGGTAAGAATGAGTCAGGCCCACTACAATaGCTGTGGTGGAGTTGTGCG | + |
Preference number: 4 (lower is better) Translates to: RPKDTKASLSRVEVGKNESGPLQ*LWWSCA Trigger: CGCACAACTCCACCACAGTCATTGTAGTGGGCCTGA...CTCATTCTTACCTACCTCGACTCTTGAGAGGGAGGCTTTGGTATCCTTGGGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | ACCAATCCTAAGAGAAGCTTGGCAAGGGATGAGGAAAAACTGTCTCGCCCTTGCTCAGGCCCACTACAATaGCTGTGGTGGAGTTGTGCG | + |
Preference number: 4 (lower is better) Translates to: TNPKRSLARDEEKLSRPCSGPLQ*LWWSCA Trigger: CGCACAACTCCACCACAGTCATTGTAGTGGGCCTGA...GCAAGGGCGAGACAGTTTTTCCTCATCCCTTGCCAAGCTTCTCTTAGGATTGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR GCA 90 bp | ACCAGAGGGCTAAAGAGAGCTAGTCAGTCTTGCCAAATCAGGTCCTGGGGCGGTGTGCAGTGTAGATGTTaGAGACAATTCCTAGGGCCA | + |
Preference number: 4 (lower is better) Translates to: TRGLKRASQSCQIRSWGGVQCRC*RQFLGP Trigger: TGGCCCTAGGAATTGTCTGCAACATCTACACTGCAC...ACCGCCCCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAGCCCTCTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR GCA 90 bp | GGAATCACCAGAGGGCTAAAGAGAGCTAGTCAGTCTTGCCAAATCAGGTCCTGGCTTCAGCCCACCCAGTaGAGTGTAGATGTTGCAGAC | + |
Preference number: 4 (lower is better) Translates to: GITRGLKRASQSCQIRSWLQPTQ*SVDVAD Trigger: GTCTGCAACATCTACACTGCACTGGGTGGGCTGAAG...CCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAGCCCTCTGGTGATTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR GCA 90 bp | ACCAATCCTAAGAGAAGCTTGGCAAGGGATGAGGAAAAACTGTCTCGCCCTTGCATGCAGAGGGCCACTTaGTGGCAAGGGAACACTGCA | + |
Preference number: 4 (lower is better) Translates to: TNPKRSLARDEEKLSRPCMQRAT*WQGNTA Trigger: TGCAGTGTTCCCTTGCCAGCAAGTGGCCCTCTGCAT...GCAAGGGCGAGACAGTTTTTCCTCATCCCTTGCCAAGCTTCTCTTAGGATTGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR GCA 90 bp | TCCTGGGGCGGTTGTAAGAAATGCTGTTCCTACTCACTCCAAAGAACCCTGGTCATTAAGGGGAGGGGGTaGCACAGCAGAACTCATCCT | + |
Preference number: 4 (lower is better) Translates to: SWGGCKKCCSYSLQRTLVIKGRG*HSRTHP Trigger: AGGATGAGTTCTGCTGTGGCACCCCCTCCCCTTAAT...GACCAGGGTTCTTTGGAGTGAGTAGGAACAGCATTTCTTACAACCGCCCCAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | AGACCCAAGGATACCAAAGCCTCCCTCTCAAGAGTCGAGGTAGGTAAGAATGAGGAGCCTGAGGTTGTATaGAAGGGAGCTGCAGTGCTC | + |
Preference number: 4 (lower is better) Translates to: RPKDTKASLSRVEVGKNEEPEVV*KGAAVL Trigger: GAGCACTGCAGCTCCCTTCCATACAACCTCAGGCTC...CTCATTCTTACCTACCTCGACTCTTGAGAGGGAGGCTTTGGTATCCTTGGGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | ACCAATCCTAAGAGAAGCTTGGCAAGGGATGAGGAAAAACTGTCTCGCCCTTGCGAGCCTGAGGTTGTATaGAAGGGAGCTGCAGTGCTC | + |
Preference number: 4 (lower is better) Translates to: TNPKRSLARDEEKLSRPCEPEVV*KGAAVL Trigger: GAGCACTGCAGCTCCCTTCCATACAACCTCAGGCTC...GCAAGGGCGAGACAGTTTTTCCTCATCCCTTGCCAAGCTTCTCTTAGGATTGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | AGACCCAAGGATACCAAAGCCTCCCTCTCAAGAGTCGAGGTAGGTAAGAATGAGAGTTCACCAACGGTATaGTGGCCCCAGCCACGACAA | + |
Preference number: 4 (lower is better) Translates to: RPKDTKASLSRVEVGKNESSPTV*WPQPRQ Trigger: TTGTCGTGGCTGGGGCCACCATACCGTTGGTGAACT...CTCATTCTTACCTACCTCGACTCTTGAGAGGGAGGCTTTGGTATCCTTGGGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | AGGGCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCCCCCAGGAACCAATACTaGGTTCCAAATCGGAAGATC | + |
Preference number: 4 (lower is better) Translates to: RALKYCLKRARIDVENCPPRNQY*VPNRKI Trigger: GATCTTCCGATTTGGAACCCAGTATTGGTTCCTGGG...GGGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGCCCT 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | GAGGGCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCCCCAGGAACCAATACTaGGTTCCAAATCGGAAGATC | + |
Preference number: 4 (lower is better) Translates to: EGPEVLPEEGKDRCGKLSPRNQY*VPNRKI Trigger: GATCTTCCGATTTGGAACCCAGTATTGGTTCCTGGG...GGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGCCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | AAAGCCTCCCTCTCAAGAGTCGAGGTAGGTAAGAATGAGAGAGGACTTGAGTATGAGCCCAGGCAGCCCTaGCATGTCTTTCAGGAGGTC | + |
Preference number: 4 (lower is better) Translates to: KASLSRVEVGKNERGLEYEPRQP*HVFQEV Trigger: GACCTCCTGAAAGACATGCCAGGGCTGCCTGGGCTC...ATACTCAAGTCCTCTCTCATTCTTACCTACCTCGACTCTTGAGAGGGAGGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | AGACCCAAGGATACCAAAGCCTCCCTCTCAAGAGTCGAGGTAGGTAAGAATGAGTGTGGGAACCAGGGCTaGATCAGGTCTTCCATCGTG | + |
Preference number: 4 (lower is better) Translates to: RPKDTKASLSRVEVGKNECGNQG*IRSSIV Trigger: CACGATGGAAGACCTGATCCAGCCCTGGTTCCCACA...CTCATTCTTACCTACCTCGACTCTTGAGAGGGAGGCTTTGGTATCCTTGGGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | ACCAATCCTAAGAGAAGCTTGGCAAGGGATGAGGAAAAACTGTCTCGCCCTTGCTGTGGGAACCAGGGCTaGATCAGGTCTTCCATCGTG | + |
Preference number: 4 (lower is better) Translates to: TNPKRSLARDEEKLSRPCCGNQG*IRSSIV Trigger: CACGATGGAAGACCTGATCCAGCCCTGGTTCCCACA...GCAAGGGCGAGACAGTTTTTCCTCATCCCTTGCCAAGCTTCTCTTAGGATTGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | ACCAATCCTAAGAGAAGCTTGGCAAGGGATGAGGAAAAACTGTCTCGCCCTTGCGAAGAGTCCCAGCAGTaGCCCTCCAACCATGCCAAA | + |
Preference number: 4 (lower is better) Translates to: TNPKRSLARDEEKLSRPCEESQQ*PSNHAK Trigger: TTTGGCATGGTTGGAGGGCCACTGCTGGGACTCTTC...GCAAGGGCGAGACAGTTTTTCCTCATCCCTTGCCAAGCTTCTCTTAGGATTGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | AAAGCCTCCCTCTCAAGAGTCGAGGTAGGTAAGAATGAGAGAGGACTTGAGTATACAGGGATGAAGATGTaGGCAGGGATCAGGAGCCCC | + |
Preference number: 4 (lower is better) Translates to: KASLSRVEVGKNERGLEYTGMKM*AGIRSP Trigger: GGGGCTCCTGATCCCTGCTCACATCTTCATCCCTGT...ATACTCAAGTCCTCTCTCATTCTTACCTACCTCGACTCTTGAGAGGGAGGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | GAGGGCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCCGTGACAGTTGCCAGTaGATTGAATGCAGAGGATAT | + |
Preference number: 4 (lower is better) Translates to: EGPEVLPEEGKDRCGKLSRDSCQ*IECRGY Trigger: ATATCCTCTGCATTCAATTCACTGGCAACTGTCACG...GGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | AGACCCAAGGATACCAAAGCCTCCCTCTCAAGAGTCGAGGTAGGTAAGAATGAGTGCTGCCTGGAGCACTaGTCCCAGATGAGAGGAAAT | + |
Preference number: 4 (lower is better) Translates to: RPKDTKASLSRVEVGKNECCLEH*SQMRGN Trigger: ATTTCCTCTCATCTGGGATCAGTGCTCCAGGCAGCA...CTCATTCTTACCTACCTCGACTCTTGAGAGGGAGGCTTTGGTATCCTTGGGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
||
CDS-3UTR GCA 90 bp | TCCTGGGGCGGTTGTAAGAAATGCTGTTCCTACTCACTCCAAAGAACCCTGGTCGAAGACAGCCCATTTTaGGGTCTGCCATCAGCAGTT | + |
Preference number: 4 (lower is better) Translates to: SWGGCKKCCSYSLQRTLVEDSPF*GLPSAV Trigger: AACTGCTGATGGCAGACCGCAAAATGGGCTGTCTTC...GACCAGGGTTCTTTGGAGTGAGTAGGAACAGCATTTCTTACAACCGCCCCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR GCA 90 bp | GTTCCTACTCACTCCAAAGAACCCTGGTCACTTAATCAAATGCCACCCTTTTCTGAAGATCTCAGCTGGTaGTCCCAGGATGGCCACGGC | + |
Preference number: 4 (lower is better) Translates to: VPTHSKEPWSLNQMPPFSEDLSW*SQDGHG Trigger: GCCGTGGCCATCCTGGGAGCACCAGCTGAGATCTTC...AGAAAAGGGTGGCATTTGATTAAGTGACCAGGGTTCTTTGGAGTGAGTAGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR GCA 90 bp | GTAGGTAAGAATGAGAGAGGACTTGAGTATTACAGAGAACCCGAAAGACCTCAGGAAGATCTCAGCTGGTaGTCCCAGGATGGCCACGGC | + |
Preference number: 4 (lower is better) Translates to: VGKNERGLEYYREPERPQEDLSW*SQDGHG Trigger: GCCGTGGCCATCCTGGGAGCACCAGCTGAGATCTTC...CTGAGGTCTTTCGGGTTCTCTGTAATACTCAAGTCCTCTCTCATTCTTACCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR GCA 90 bp | ACCAATCCTAAGAGAAGCTTGGCAAGGGATGAGGAAAAACTGTCTCGCCCTTGCCTTCAGCCCACCCAGTaGAGTGTAGATGTTGCAGAC | + |
Preference number: 4 (lower is better) Translates to: TNPKRSLARDEEKLSRPCLQPTQ*SVDVAD Trigger: GTCTGCAACATCTACACTGCACTGGGTGGGCTGAAG...GCAAGGGCGAGACAGTTTTTCCTCATCCCTTGCCAAGCTTCTCTTAGGATTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR GCA 90 bp | GTAGGTAAGAATGAGAGAGGACTTGAGTATTACAGAGAACCCGAAAGACCTCAGTGGTCAGGGGCTGCTTaGTTCAGCTCGGGGCTCATG | + |
Preference number: 4 (lower is better) Translates to: VGKNERGLEYYREPERPQWSGAA*FSSGLM Trigger: CATGAGCCCCGAGCTGAAGCAAGCAGCCCCTGACCA...CTGAGGTCTTTCGGGTTCTCTGTAATACTCAAGTCCTCTCTCATTCTTACCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | GTTCCTACTCACTCCAAAGAACCCTGGTCACTTAATCAAATGCCACCCTTTTCTATGGCCACGGCTGACTaGAAGGTGGCCAGCAAGGAC | + |
Preference number: 4 (lower is better) Translates to: VPTHSKEPWSLNQMPPFSMATAD*KVASKD Trigger: GTCCTTGCTGGCCACCTTCCAGTCAGCCGTGGCCAT...AGAAAAGGGTGGCATTTGATTAAGTGACCAGGGTTCTTTGGAGTGAGTAGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | TTCCTACTCACTCCAAAGAACCCTGGTCACTTAATCAAATGCCACCCTTTTCTTCTGGTGCTCCCAGGATaGCCACGGCTGACTGGAAGG | + |
Preference number: 4 (lower is better) Translates to: FLLTPKNPGHLIKCHPFLLVLPG*PRLTGR Trigger: CCTTCCAGTCAGCCGTGGCCATCCTGGGAGCACCAG...AAGAAAAGGGTGGCATTTGATTAAGTGACCAGGGTTCTTTGGAGTGAGTAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | GTGAGTGAGTCATCTCTGCACTACAAAATAGCCTCCGGCTGCTGTCTGCAGCGACCCAGGAACCAATACTaGGTTCCAAATCGGAAGATC | + |
Preference number: 4 (lower is better) Translates to: VSESSLHYKIASGCCLQRPRNQY*VPNRKI Trigger: GATCTTCCGATTTGGAACCCAGTATTGGTTCCTGGG...TCGCTGCAGACAGCAGCCGGAGGCTATTTTGTAGTGCAGAGATGACTCACTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | AGACCCAAGGATACCAAAGCCTCCCTCTCAAGAGTCGAGGTAGGTAAGAATGAGGTCACATTCCATACATaGCCCAAGCCACCCACTCTG | + |
Preference number: 4 (lower is better) Translates to: RPKDTKASLSRVEVGKNEVTFHT*PKPPTL Trigger: CAGAGTGGGTGGCTTGGGCCATGTATGGAATGTGAC...CTCATTCTTACCTACCTCGACTCTTGAGAGGGAGGCTTTGGTATCCTTGGGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | GTGAGTGAGTCATCTCTGCACTACAAAATAGCCTCCGGCTGCTGTCTGCAGCGATCTCTGGAAACAGGTTaGGGATCACAGGGATATCCT | + |
Preference number: 4 (lower is better) Translates to: VSESSLHYKIASGCCLQRSLETG*GSQGYP Trigger: AGGATATCCCTGTGATCCCCAACCTGTTTCCAGAGA...TCGCTGCAGACAGCAGCCGGAGGCTATTTTGTAGTGCAGAGATGACTCACTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | GTAGGTAAGAATGAGAGAGGACTTGAGTATTACAGAGAACCCGAAAGACCTCAGACAGGGATGAAGATGTaGGCAGGGATCAGGAGCCCC | + |
Preference number: 4 (lower is better) Translates to: VGKNERGLEYYREPERPQTGMKM*AGIRSP Trigger: GGGGCTCCTGATCCCTGCTCACATCTTCATCCCTGT...CTGAGGTCTTTCGGGTTCTCTGTAATACTCAAGTCCTCTCTCATTCTTACCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR GCA 90 bp | ACCAATCCTAAGAGAAGCTTGGCAAGGGATGAGGAAAAACTGTCTCGCCCTTGCATGATCACTACCAGCTaGCCGAGGAACATGACCAGT | + |
Preference number: 4 (lower is better) Translates to: TNPKRSLARDEEKLSRPCMITTS*PRNMTS Trigger: ACTGGTCATGTTCCTCGGGCAGCTGGTAGTGATCAT...GCAAGGGCGAGACAGTTTTTCCTCATCCCTTGCCAAGCTTCTCTTAGGATTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR GCA 90 bp | AAAGCCTCCCTCTCAAGAGTCGAGGTAGGTAAGAATGAGAGAGGACTTGAGTATCTGGCAAGGGAACACTaGATAGCAGGAGAGCACAGC | + |
Preference number: 4 (lower is better) Translates to: KASLSRVEVGKNERGLEYLAREH*IAGEHS Trigger: GCTGTGCTCTCCTGCTATGCAGTGTTCCCTTGCCAG...ATACTCAAGTCCTCTCTCATTCTTACCTACCTCGACTCTTGAGAGGGAGGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR GCA 90 bp | AGACCCAAGGATACCAAAGCCTCCCTCTCAAGAGTCGAGGTAGGTAAGAATGAGTTACTATGCTCCCAATaGCGATCCAGAAGGCCATGG | + |
Preference number: 4 (lower is better) Translates to: RPKDTKASLSRVEVGKNELLCSQ*RSRRPW Trigger: CCATGGCCTTCTGGATCGGCATTGGGAGCATAGTAA...CTCATTCTTACCTACCTCGACTCTTGAGAGGGAGGCTTTGGTATCCTTGGGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | GTAGGTAAGAATGAGAGAGGACTTGAGTATTACAGAGAACCCGAAAGACCTCAGTCGGAAGATCTCAGCTaGTGCTCCCAGGATGGCCAC | + |
Preference number: 4 (lower is better) Translates to: VGKNERGLEYYREPERPQSEDLS*CSQDGH Trigger: GTGGCCATCCTGGGAGCACCAGCTGAGATCTTCCGA...CTGAGGTCTTTCGGGTTCTCTGTAATACTCAAGTCCTCTCTCATTCTTACCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | ACCAATCCTAAGAGAAGCTTGGCAAGGGATGAGGAAAAACTGTCTCGCCCTTGCATTGAGGGCCAAGGATaGTGCATAGAGAGCAACTCC | + |
Preference number: 4 (lower is better) Translates to: TNPKRSLARDEEKLSRPCIEGQG*CIESNS Trigger: GGAGTTGCTCTCTATGCACCATCCTTGGCCCTCAAT...GCAAGGGCGAGACAGTTTTTCCTCATCCCTTGCCAAGCTTCTCTTAGGATTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | GTTCCTACTCACTCCAAAGAACCCTGGTCACTTAATCAAATGCCACCCTTTTCTCGGCGACAGTTACATTaGCAGGCAGGAAGGAGCTGG | + |
Preference number: 4 (lower is better) Translates to: VPTHSKEPWSLNQMPPFSRRQLH*QAGRSW Trigger: CCAGCTCCTTCCTGCCTGCCAATGTAACTGTCGCCG...AGAAAAGGGTGGCATTTGATTAAGTGACCAGGGTTCTTTGGAGTGAGTAGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | GGAATCACCAGAGGGCTAAAGAGAGCTAGTCAGTCTTGCCAAATCAGGTCCTGGTCTCTGGAAACAGGTTaGGGATCACAGGGATATCCT | + |
Preference number: 4 (lower is better) Translates to: GITRGLKRASQSCQIRSWSLETG*GSQGYP Trigger: AGGATATCCCTGTGATCCCCAACCTGTTTCCAGAGA...CCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAGCCCTCTGGTGATTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | GTGAGTGAGTCATCTCTGCACTACAAAATAGCCTCCGGCTGCTGTCTGCAGCGAATTCCTCATCTTCTCTaGAAACAGGTTGGGGATCAC | + |
Preference number: 4 (lower is better) Translates to: VSESSLHYKIASGCCLQRIPHLL*KQVGDH Trigger: GTGATCCCCAACCTGTTTCCAGAGAAGATGAGGAAT...TCGCTGCAGACAGCAGCCGGAGGCTATTTTGTAGTGCAGAGATGACTCACTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | AGACCCAAGGATACCAAAGCCTCCCTCTCAAGAGTCGAGGTAGGTAAGAATGAGTCACCATCTGAAAGATaGAGGTCACAGTCCCACAGA | + |
Preference number: 4 (lower is better) Translates to: RPKDTKASLSRVEVGKNESPSER*RSQSHR Trigger: TCTGTGGGACTGTGACCTTCATCTTTCAGATGGTGA...CTCATTCTTACCTACCTCGACTCTTGAGAGGGAGGCTTTGGTATCCTTGGGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | GAGGGCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCATGTATATCACCATCTaGAAGATGAAGGTCACAGTC | + |
Preference number: 4 (lower is better) Translates to: EGPEVLPEEGKDRCGKLSMYITI*KMKVTV Trigger: GACTGTGACCTTCATCTTTCAGATGGTGATATACAT...GGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | AAAGCCTCCCTCTCAAGAGTCGAGGTAGGTAAGAATGAGAGAGGACTTGAGTATATCCAGTCACTGCATTaGGGGCCAAGGATGGTGCAT | + |
Preference number: 4 (lower is better) Translates to: KASLSRVEVGKNERGLEYIQSLH*GPRMVH Trigger: ATGCACCATCCTTGGCCCTCAATGCAGTGACTGGAT...ATACTCAAGTCCTCTCTCATTCTTACCTACCTCGACTCTTGAGAGGGAGGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | GTAGGTAAGAATGAGAGAGGACTTGAGTATTACAGAGAACCCGAAAGACCTCAGGGCCTCGAGAAAGCATaGTGGCCCGAGTTTCAGTCA | + |
Preference number: 4 (lower is better) Translates to: VGKNERGLEYYREPERPQGLEKA*WPEFQS Trigger: TGACTGAAACTCGGGCCATCATGCTTTCTCGAGGCC...CTGAGGTCTTTCGGGTTCTCTGTAATACTCAAGTCCTCTCTCATTCTTACCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | TTCCTACTCACTCCAAAGAACCCTGGTCACTTAATCAAATGCCACCCTTTTCTTCGGCGACAGTTACATTaGCAGGCAGGAAGGAGCTGG | + |
Preference number: 4 (lower is better) Translates to: FLLTPKNPGHLIKCHPFLRRQLH*QAGRSW Trigger: CCAGCTCCTTCCTGCCTGCCAATGTAACTGTCGCCG...AAGAAAAGGGTGGCATTTGATTAAGTGACCAGGGTTCTTTGGAGTGAGTAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | GTAGGTAAGAATGAGAGAGGACTTGAGTATTACAGAGAACCCGAAAGACCTCAGCATGATAGAGCCCAATaGCAAGGGAGAGGACCAGCA | + |
Preference number: 4 (lower is better) Translates to: VGKNERGLEYYREPERPQHDRAQ*QGRGPA Trigger: TGCTGGTCCTCTCCCTTGTCATTGGGCTCTATCATG...CTGAGGTCTTTCGGGTTCTCTGTAATACTCAAGTCCTCTCTCATTCTTACCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | GTGAGTGAGTCATCTCTGCACTACAAAATAGCCTCCGGCTGCTGTCTGCAGCGAATGTATATCACCATCTaGAAGATGAAGGTCACAGTC | + |
Preference number: 4 (lower is better) Translates to: VSESSLHYKIASGCCLQRMYITI*KMKVTV Trigger: GACTGTGACCTTCATCTTTCAGATGGTGATATACAT...TCGCTGCAGACAGCAGCCGGAGGCTATTTTGTAGTGCAGAGATGACTCACTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | AGACCCAAGGATACCAAAGCCTCCCTCTCAAGAGTCGAGGTAGGTAAGAATGAGCGTGACAGTTGCCAGTaGATTGAATGCAGAGGATAT | + |
Preference number: 4 (lower is better) Translates to: RPKDTKASLSRVEVGKNERDSCQ*IECRGY Trigger: ATATCCTCTGCATTCAATTCACTGGCAACTGTCACG...CTCATTCTTACCTACCTCGACTCTTGAGAGGGAGGCTTTGGTATCCTTGGGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR GCA 90 bp | GTAGGTAAGAATGAGAGAGGACTTGAGTATTACAGAGAACCCGAAAGACCTCAGGCCCATTTTGCGGTCTaGCATCAGCAGTTCACCAAC | + |
Preference number: 4 (lower is better) Translates to: VGKNERGLEYYREPERPQAHFAV*HQQFTN Trigger: GTTGGTGAACTGCTGATGGCAGACCGCAAAATGGGC...CTGAGGTCTTTCGGGTTCTCTGTAATACTCAAGTCCTCTCTCATTCTTACCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | TTCCTACTCACTCCAAAGAACCCTGGTCACTTAATCAAATGCCACCCTTTTCTTAGTTCACCAACGGTATaGTGGCCCCAGCCACGACAA | + |
Preference number: 4 (lower is better) Translates to: FLLTPKNPGHLIKCHPFLSSPTV*WPQPRQ Trigger: TTGTCGTGGCTGGGGCCACCATACCGTTGGTGAACT...AAGAAAAGGGTGGCATTTGATTAAGTGACCAGGGTTCTTTGGAGTGAGTAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | AACAAAATGCATGAAGAGGAAACTCCCAAAGGAAATAATAGTTGCACAGATGACCTGGTGCTCCCAGGATaGCCACGGCTGACTGGAAGG | + |
Preference number: 4 (lower is better) Translates to: NKMHEEETPKGNNSCTDDLVLPG*PRLTGR Trigger: CCTTCCAGTCAGCCGTGGCCATCCTGGGAGCACCAG...GTCATCTGTGCAACTATTATTTCCTTTGGGAGTTTCCTCTTCATGCATTTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | TTCCTACTCACTCCAAAGAACCCTGGTCACTTAATCAAATGCCACCCTTTTCTTGAAGAGTCCCAGCAGTaGCCCTCCAACCATGCCAAA | + |
Preference number: 4 (lower is better) Translates to: FLLTPKNPGHLIKCHPFLEESQQ*PSNHAK Trigger: TTTGGCATGGTTGGAGGGCCACTGCTGGGACTCTTC...AAGAAAAGGGTGGCATTTGATTAAGTGACCAGGGTTCTTTGGAGTGAGTAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | AAAGCCTCCCTCTCAAGAGTCGAGGTAGGTAAGAATGAGAGAGGACTTGAGTATTCACCATCTGAAAGATaGAGGTCACAGTCCCACAGA | + |
Preference number: 4 (lower is better) Translates to: KASLSRVEVGKNERGLEYSPSER*RSQSHR Trigger: TCTGTGGGACTGTGACCTTCATCTTTCAGATGGTGA...ATACTCAAGTCCTCTCTCATTCTTACCTACCTCGACTCTTGAGAGGGAGGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | TTCCTACTCACTCCAAAGAACCCTGGTCACTTAATCAAATGCCACCCTTTTCTTGCTGCCCGAGGAACATaGCCAGTGTTTGGAACACAT | + |
Preference number: 4 (lower is better) Translates to: FLLTPKNPGHLIKCHPFLAARGT*PVFGTH Trigger: ATGTGTTCCAAACACTGGTCATGTTCCTCGGGCAGC...AAGAAAAGGGTGGCATTTGATTAAGTGACCAGGGTTCTTTGGAGTGAGTAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | GTTCCTACTCACTCCAAAGAACCCTGGTCACTTAATCAAATGCCACCCTTTTCTACAAGGAGAGCATCATaGAGACACCTCCAAAGGCCA | + |
Preference number: 4 (lower is better) Translates to: VPTHSKEPWSLNQMPPFSTRRAS*RHLQRP Trigger: TGGCCTTTGGAGGTGTCTTCATGATGCTCTCCTTGT...AGAAAAGGGTGGCATTTGATTAAGTGACCAGGGTTCTTTGGAGTGAGTAGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | AACAAAATGCATGAAGAGGAAACTCCCAAAGGAAATAATAGTTGCACAGATGACTCTCCGAGTGGGAACTaGGGTAGCGCTGCACCTGAG | + |
Preference number: 4 (lower is better) Translates to: NKMHEEETPKGNNSCTDDSPSGN*GSAAPE Trigger: CTCAGGTGCAGCGCTACCTCAGTTCCCACTCGGAGA...GTCATCTGTGCAACTATTATTTCCTTTGGGAGTTTCCTCTTCATGCATTTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR GCA 90 bp | TTCCTACTCACTCCAAAGAACCCTGGTCACTTAATCAAATGCCACCCTTTTCTTGCCCATTTTGCGGTCTaGCATCAGCAGTTCACCAAC | + |
Preference number: 4 (lower is better) Translates to: FLLTPKNPGHLIKCHPFLAHFAV*HQQFTN Trigger: GTTGGTGAACTGCTGATGGCAGACCGCAAAATGGGC...AAGAAAAGGGTGGCATTTGATTAAGTGACCAGGGTTCTTTGGAGTGAGTAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR GCA 90 bp | AAAGCCTCCCTCTCAAGAGTCGAGGTAGGTAAGAATGAGAGAGGACTTGAGTATGTGCAGTGTAGATGTTaGAGACAATTCCTAGGGCCA | + |
Preference number: 4 (lower is better) Translates to: KASLSRVEVGKNERGLEYVQCRC*RQFLGP Trigger: TGGCCCTAGGAATTGTCTGCAACATCTACACTGCAC...ATACTCAAGTCCTCTCTCATTCTTACCTACCTCGACTCTTGAGAGGGAGGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | AACAAAATGCATGAAGAGGAAACTCCCAAAGGAAATAATAGTTGCACAGATGACGAGCCCAGGCAGCCCTaGCATGTCTTTCAGGAGGTC | + |
Preference number: 4 (lower is better) Translates to: NKMHEEETPKGNNSCTDDEPRQP*HVFQEV Trigger: GACCTCCTGAAAGACATGCCAGGGCTGCCTGGGCTC...GTCATCTGTGCAACTATTATTTCCTTTGGGAGTTTCCTCTTCATGCATTTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | GTAGGTAAGAATGAGAGAGGACTTGAGTATTACAGAGAACCCGAAAGACCTCAGAGTTTCAGTCAACTGTaGGAACCAGGGCTGGATCAG | + |
Preference number: 4 (lower is better) Translates to: VGKNERGLEYYREPERPQSFSQL*EPGLDQ Trigger: CTGATCCAGCCCTGGTTCCCACAGTTGACTGAAACT...CTGAGGTCTTTCGGGTTCTCTGTAATACTCAAGTCCTCTCTCATTCTTACCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | TTCCTACTCACTCCAAAGAACCCTGGTCACTTAATCAAATGCCACCCTTTTCTTACAAGGAGAGCATCATaGAGACACCTCCAAAGGCCA | + |
Preference number: 4 (lower is better) Translates to: FLLTPKNPGHLIKCHPFLTRRAS*RHLQRP Trigger: TGGCCTTTGGAGGTGTCTTCATGATGCTCTCCTTGT...AAGAAAAGGGTGGCATTTGATTAAGTGACCAGGGTTCTTTGGAGTGAGTAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
||
CDS-3UTR GCA 90 bp | GTAGGTAAGAATGAGAGAGGACTTGAGTATTACAGAGAACCCGAAAGACCTCAGGTGCAGTGTAGATGTTaGAGACAATTCCTAGGGCCA | + |
Preference number: 4 (lower is better) Translates to: VGKNERGLEYYREPERPQVQCRC*RQFLGP Trigger: TGGCCCTAGGAATTGTCTGCAACATCTACACTGCAC...CTGAGGTCTTTCGGGTTCTCTGTAATACTCAAGTCCTCTCTCATTCTTACCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR GCA 90 bp | TTCCTACTCACTCCAAAGAACCCTGGTCACTTAATCAAATGCCACCCTTTTCTTATGATCACTACCAGCTaGCCGAGGAACATGACCAGT | + |
Preference number: 4 (lower is better) Translates to: FLLTPKNPGHLIKCHPFLMITTS*PRNMTS Trigger: ACTGGTCATGTTCCTCGGGCAGCTGGTAGTGATCAT...AAGAAAAGGGTGGCATTTGATTAAGTGACCAGGGTTCTTTGGAGTGAGTAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | AACAAAATGCATGAAGAGGAAACTCCCAAAGGAAATAATAGTTGCACAGATGACTCGGAAGATCTCAGCTaGTGCTCCCAGGATGGCCAC | + |
Preference number: 4 (lower is better) Translates to: NKMHEEETPKGNNSCTDDSEDLS*CSQDGH Trigger: GTGGCCATCCTGGGAGCACCAGCTGAGATCTTCCGA...GTCATCTGTGCAACTATTATTTCCTTTGGGAGTTTCCTCTTCATGCATTTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | TTCCTACTCACTCCAAAGAACCCTGGTCACTTAATCAAATGCCACCCTTTTCTTATTGAGGGCCAAGGATaGTGCATAGAGAGCAACTCC | + |
Preference number: 4 (lower is better) Translates to: FLLTPKNPGHLIKCHPFLIEGQG*CIESNS Trigger: GGAGTTGCTCTCTATGCACCATCCTTGGCCCTCAAT...AAGAAAAGGGTGGCATTTGATTAAGTGACCAGGGTTCTTTGGAGTGAGTAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | TTCCTACTCACTCCAAAGAACCCTGGTCACTTAATCAAATGCCACCCTTTTCTTATCACAGGGATATCCTaGCTGTGGCTTCTCCAGCAA | + |
Preference number: 4 (lower is better) Translates to: FLLTPKNPGHLIKCHPFLITGIS*LWLLQQ Trigger: TTGCTGGAGAAGCCACAGCCAGGATATCCCTGTGAT...AAGAAAAGGGTGGCATTTGATTAAGTGACCAGGGTTCTTTGGAGTGAGTAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | GTTCCTACTCACTCCAAAGAACCCTGGTCACTTAATCAAATGCCACCCTTTTCTTCTCTGGAAACAGGTTaGGGATCACAGGGATATCCT | + |
Preference number: 4 (lower is better) Translates to: VPTHSKEPWSLNQMPPFSSLETG*GSQGYP Trigger: AGGATATCCCTGTGATCCCCAACCTGTTTCCAGAGA...AGAAAAGGGTGGCATTTGATTAAGTGACCAGGGTTCTTTGGAGTGAGTAGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | AACAAAATGCATGAAGAGGAAACTCCCAAAGGAAATAATAGTTGCACAGATGACGGCCTCGAGAAAGCATaGTGGCCCGAGTTTCAGTCA | + |
Preference number: 4 (lower is better) Translates to: NKMHEEETPKGNNSCTDDGLEKA*WPEFQS Trigger: TGACTGAAACTCGGGCCATCATGCTTTCTCGAGGCC...GTCATCTGTGCAACTATTATTTCCTTTGGGAGTTTCCTCTTCATGCATTTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR GCA 90 bp | AACAAAATGCATGAAGAGGAAACTCCCAAAGGAAATAATAGTTGCACAGATGACATGCAGAGGGCCACTTaGTGGCAAGGGAACACTGCA | + |
Preference number: 4 (lower is better) Translates to: NKMHEEETPKGNNSCTDDMQRAT*WQGNTA Trigger: TGCAGTGTTCCCTTGCCAGCAAGTGGCCCTCTGCAT...GTCATCTGTGCAACTATTATTTCCTTTGGGAGTTTCCTCTTCATGCATTTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | AACAAAATGCATGAAGAGGAAACTCCCAAAGGAAATAATAGTTGCACAGATGACTGTGGGAACCAGGGCTaGATCAGGTCTTCCATCGTG | + |
Preference number: 4 (lower is better) Translates to: NKMHEEETPKGNNSCTDDCGNQG*IRSSIV Trigger: CACGATGGAAGACCTGATCCAGCCCTGGTTCCCACA...GTCATCTGTGCAACTATTATTTCCTTTGGGAGTTTCCTCTTCATGCATTTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | AACAAAATGCATGAAGAGGAAACTCCCAAAGGAAATAATAGTTGCACAGATGACGAAGAGTCCCAGCAGTaGCCCTCCAACCATGCCAAA | + |
Preference number: 4 (lower is better) Translates to: NKMHEEETPKGNNSCTDDEESQQ*PSNHAK Trigger: TTTGGCATGGTTGGAGGGCCACTGCTGGGACTCTTC...GTCATCTGTGCAACTATTATTTCCTTTGGGAGTTTCCTCTTCATGCATTTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | GTAGGTAAGAATGAGAGAGGACTTGAGTATTACAGAGAACCCGAAAGACCTCAGATTCCTCATCTTCTCTaGAAACAGGTTGGGGATCAC | + |
Preference number: 4 (lower is better) Translates to: VGKNERGLEYYREPERPQIPHLL*KQVGDH Trigger: GTGATCCCCAACCTGTTTCCAGAGAAGATGAGGAAT...CTGAGGTCTTTCGGGTTCTCTGTAATACTCAAGTCCTCTCTCATTCTTACCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | GTTCCTACTCACTCCAAAGAACCCTGGTCACTTAATCAAATGCCACCCTTTTCTATTCCTCATCTTCTCTaGAAACAGGTTGGGGATCAC | + |
Preference number: 4 (lower is better) Translates to: VPTHSKEPWSLNQMPPFSIPHLL*KQVGDH Trigger: GTGATCCCCAACCTGTTTCCAGAGAAGATGAGGAAT...AGAAAAGGGTGGCATTTGATTAAGTGACCAGGGTTCTTTGGAGTGAGTAGGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | AACAAAATGCATGAAGAGGAAACTCCCAAAGGAAATAATAGTTGCACAGATGACCATGATAGAGCCCAATaGCAAGGGAGAGGACCAGCA | + |
Preference number: 4 (lower is better) Translates to: NKMHEEETPKGNNSCTDDHDRAQ*QGRGPA Trigger: TGCTGGTCCTCTCCCTTGTCATTGGGCTCTATCATG...GTCATCTGTGCAACTATTATTTCCTTTGGGAGTTTCCTCTTCATGCATTTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | AACAAAATGCATGAAGAGGAAACTCCCAAAGGAAATAATAGTTGCACAGATGACGCTGCCCGAGGAACATaGCCAGTGTTTGGAACACAT | + |
Preference number: 4 (lower is better) Translates to: NKMHEEETPKGNNSCTDDAARGT*PVFGTH Trigger: ATGTGTTCCAAACACTGGTCATGTTCCTCGGGCAGC...GTCATCTGTGCAACTATTATTTCCTTTGGGAGTTTCCTCTTCATGCATTTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | AACAAAATGCATGAAGAGGAAACTCCCAAAGGAAATAATAGTTGCACAGATGACTGCTGCCTGGAGCACTaGTCCCAGATGAGAGGAAAT | + |
Preference number: 4 (lower is better) Translates to: NKMHEEETPKGNNSCTDDCCLEH*SQMRGN Trigger: ATTTCCTCTCATCTGGGATCAGTGCTCCAGGCAGCA...GTCATCTGTGCAACTATTATTTCCTTTGGGAGTTTCCTCTTCATGCATTTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | GTAGGTAAGAATGAGAGAGGACTTGAGTATTACAGAGAACCCGAAAGACCTCAGATGTATATCACCATCTaGAAGATGAAGGTCACAGTC | + |
Preference number: 4 (lower is better) Translates to: VGKNERGLEYYREPERPQMYITI*KMKVTV Trigger: GACTGTGACCTTCATCTTTCAGATGGTGATATACAT...CTGAGGTCTTTCGGGTTCTCTGTAATACTCAAGTCCTCTCTCATTCTTACCTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR GCA 90 bp | AACAAAATGCATGAAGAGGAAACTCCCAAAGGAAATAATAGTTGCACAGATGACATGATCACTACCAGCTaGCCGAGGAACATGACCAGT | + |
Preference number: 4 (lower is better) Translates to: NKMHEEETPKGNNSCTDDMITTS*PRNMTS Trigger: ACTGGTCATGTTCCTCGGGCAGCTGGTAGTGATCAT...GTCATCTGTGCAACTATTATTTCCTTTGGGAGTTTCCTCTTCATGCATTTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CCA 90 bp | AACAAAATGCATGAAGAGGAAACTCCCAAAGGAAATAATAGTTGCACAGATGACATTGAGGGCCAAGGATaGTGCATAGAGAGCAACTCC | + |
Preference number: 4 (lower is better) Translates to: NKMHEEETPKGNNSCTDDIEGQG*CIESNS Trigger: GGAGTTGCTCTCTATGCACCATCCTTGGCCCTCAAT...GTCATCTGTGCAACTATTATTTCCTTTGGGAGTTTCCTCTTCATGCATTTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | AACAAAATGCATGAAGAGGAAACTCCCAAAGGAAATAATAGTTGCACAGATGACCGTGACAGTTGCCAGTaGATTGAATGCAGAGGATAT | + |
Preference number: 4 (lower is better) Translates to: NKMHEEETPKGNNSCTDDRDSCQ*IECRGY Trigger: ATATCCTCTGCATTCAATTCACTGGCAACTGTCACG...GTCATCTGTGCAACTATTATTTCCTTTGGGAGTTTCCTCTTCATGCATTTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR TCA 90 bp | AACAAAATGCATGAAGAGGAAACTCCCAAAGGAAATAATAGTTGCACAGATGACATGTATATCACCATCTaGAAGATGAAGGTCACAGTC | + |
Preference number: 4 (lower is better) Translates to: NKMHEEETPKGNNSCTDDMYITI*KMKVTV Trigger: GACTGTGACCTTCATCTTTCAGATGGTGATATACAT...GTCATCTGTGCAACTATTATTTCCTTTGGGAGTTTCCTCTTCATGCATTTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS TCA 90 bp | TCCAAATCGGAAGATCTCAGCTGGTGCTCCCAGGATGGCCACGGCTaGCTGGAAGGTGGCCAGCAAGGACAGTGCCACAGGAAGACAGCC | + |
Preference number: 5 (lower is better) Translates to: SKSEDLSWCSQDGHG*LEGGQQGQCHRKTA Trigger: GGCTGTCTTCCTGTGGCACTGTCCTTGCTGGCCACCTTCCAGTCAGCCGTGGCCATCCTGGGAGCACCAGCTGAGATCTTCCGATTTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS CCA 90 bp | GAGTCCCGTCAACAGGCCTACAATGGCACCAAGAGGGTTGGCGCATaGGAAGAACAGTCCAAGGCAGAAGAGTCCCAGCAGTGGCCCTCC | + |
Preference number: 5 (lower is better) Translates to: ESRQQAYNGTKRVGA*EEQSKAEESQQWPS Trigger: GGAGGGCCACTGCTGGGACTCTTCTGCCTTGGACTGTTCTTCCCATGCGCCAACCCTCTTGGTGCCATTGTAGGCCTGTTGACGGGACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CAA 90 bp | CTACAAAATAGCCTCCGGCTGCTGTCTGCAGCGAGGGCAGAGTTCACGCCCCAGTGCAGTCCTGTGGGCTaGGACAGGGTAGAAGGCATC | + |
Preference number: 5 (lower is better) Translates to: LQNSLRLLSAARAEFTPQCSPVG*DRVEGI Trigger: GATGCCTTCTACCCTGTCCAAGCCCACAGGACTGCA...CTGGGGCGTGAACTCTGCCCTCGCTGCAGACAGCAGCCGGAGGCTATTTTGTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CAA 90 bp | CTACAAAATAGCCTCCGGCTGCTGTCTGCAGCGAGGGCAGAGTTCACGCCCCAGTCAGCCATCCTCTCTTaGTCTGTGCTGTCCTGCAGC | + |
Preference number: 5 (lower is better) Translates to: LQNSLRLLSAARAEFTPQSAILS*SVLSCS Trigger: GCTGCAGGACAGCACAGACAAAGAGAGGATGGCTGA...CTGGGGCGTGAACTCTGCCCTCGCTGCAGACAGCAGCCGGAGGCTATTTTGTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS CCA 90 bp | AATACTGGGTTCCAAATCGGAAGATCTCAGCTGGTGCTCCCAGGATaGCCACGGCTGACTGGAAGGTGGCCAGCAAGGACAGTGCCACAG | + |
Preference number: 5 (lower is better) Translates to: NTGFQIGRSQLVLPG*PRLTGRWPARTVPQ Trigger: CTGTGGCACTGTCCTTGCTGGCCACCTTCCAGTCAGCCGTGGCCATCCTGGGAGCACCAGCTGAGATCTTCCGATTTGGAACCCAGTATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CAA 90 bp | GAGGGCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCCGCTGGAGCCTGAGGTaGTATGGAAGGGAGCTGCAG | + |
Preference number: 5 (lower is better) Translates to: EGPEVLPEEGKDRCGKLSRWSLR*YGRELQ Trigger: CTGCAGCTCCCTTCCATACAACCTCAGGCTCCAGCG...GGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CAA 90 bp | ACCAGAGGGCTAAAGAGAGCTAGTCAGTCTTGCCAAATCAGGTCCTGGGGCGGTCATGCAGAGGGCCACTaGCTGGCAAGGGAACACTGC | + |
Preference number: 5 (lower is better) Translates to: TRGLKRASQSCQIRSWGGHAEGH*LAREHC Trigger: GCAGTGTTCCCTTGCCAGCAAGTGGCCCTCTGCATG...ACCGCCCCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAGCCCTCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CAA 90 bp | GCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCCCCTCATGCAGAGGGCCACTaGCTGGCAAGGGAACACTGC | + |
Preference number: 5 (lower is better) Translates to: ALKYCLKRARIDVENCPPHAEGH*LAREHC Trigger: GCAGTGTTCCCTTGCCAGCAAGTGGCCCTCTGCATG...AGGGGGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CAA 90 bp | ACCAGAGGGCTAAAGAGAGCTAGTCAGTCTTGCCAAATCAGGTCCTGGGGCGGTGCGGCGACAGTTACATaGGCAGGCAGGAAGGAGCTG | + |
Preference number: 5 (lower is better) Translates to: TRGLKRASQSCQIRSWGGAATVT*AGRKEL Trigger: CAGCTCCTTCCTGCCTGCCAATGTAACTGTCGCCGC...ACCGCCCCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAGCCCTCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS TCA 90 bp | TCATCCTGCTTACTATGCTCCCAATGCCGATCCAGAAGGCCATGGTaGGTCCCGTCAACAGGCCTACAATGGCACCAAGAGGGTTGGCGC | + |
Preference number: 5 (lower is better) Translates to: SSCLLCSQCRSRRPW*VPSTGLQWHQEGWR Trigger: GCGCCAACCCTCTTGGTGCCATTGTAGGCCTGTTGACGGGACTCACCATGGCCTTCTGGATCGGCATTGGGAGCATAGTAAGCAGGATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS CCA 90 bp | GGCAAGGCCTCGAGAAAGCATGATGGCCCGAGTTTCAGTCAACTGTaGGAACCAGGGCTGGATCAGGTCTTCCATCGTGACAGTTGCCAG | + |
Preference number: 5 (lower is better) Translates to: GKASRKHDGPSFSQL*EPGLDQVFHRDSCQ Trigger: CTGGCAACTGTCACGATGGAAGACCTGATCCAGCCCTGGTTCCCACAGTTGACTGAAACTCGGGCCATCATGCTTTCTCGAGGCCTTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CAA 90 bp | GTGAGTGAGTCATCTCTGCACTACAAAATAGCCTCCGGCTGCTGTCTGCAGCGACGCTGGAGCCTGAGGTaGTATGGAAGGGAGCTGCAG | + |
Preference number: 5 (lower is better) Translates to: VSESSLHYKIASGCCLQRRWSLR*YGRELQ Trigger: CTGCAGCTCCCTTCCATACAACCTCAGGCTCCAGCG...TCGCTGCAGACAGCAGCCGGAGGCTATTTTGTAGTGCAGAGATGACTCACTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS GCA 90 bp | CTGGGAAGTCACATTCCATACATGGCCCAAGCCACCCACTCTGGCTaGTCCTACAATGATCACTACCAGCTGCCCGAGGAACATGACCAG | + |
Preference number: 5 (lower is better) Translates to: LGSHIPYMAQATHSG*SYNDHYQLPEEHDQ Trigger: CTGGTCATGTTCCTCGGGCAGCTGGTAGTGATCATTGTAGGAGCAGCCAGAGTGGGTGGCTTGGGCCATGTATGGAATGTGACTTCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 ENSMUST00000202984.2 |
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CDS GCA 90 bp | ACGGCTGGTGGACGAGGCCATCTTCAGCCATCCTCTCTTTGTCTGTaGTGTCCTGCAGCACCCCATTCCTCATCTTCTCTGGAAACAGGT | + |
Preference number: 5 (lower is better) Translates to: TAGGRGHLQPSSLCL*CPAAPHSSSSLETG Trigger: ACCTGTTTCCAGAGAAGATGAGGAATGGGGTGCTGCAGGACAGCACAGACAAAGAGAGGATGGCTGAAGATGGCCTCGTCCACCAGCCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS CCA 90 bp | TTCCTCATCTTCTCTGGAAACAGGTTGGGGATCACAGGGATATCCTaGCTGTGGCTTCTCCAGCAAAGCCGCTTCTGGCAGGATAGGGGC | + |
Preference number: 5 (lower is better) Translates to: FLIFSGNRLGITGIS*LWLLQQSRFWQDRG Trigger: GCCCCTATCCTGCCAGAAGCGGCTTTGCTGGAGAAGCCACAGCCAGGATATCCCTGTGATCCCCAACCTGTTTCCAGAGAAGATGAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS CCA 90 bp | TGCTGTCCTGCAGCACCCCATTCCTCATCTTCTCTGGAAACAGGTTaGGGATCACAGGGATATCCTGGCTGTGGCTTCTCCAGCAAAGCC | + |
Preference number: 5 (lower is better) Translates to: CCPAAPHSSSSLETG*GSQGYPGCGFSSKA Trigger: GGCTTTGCTGGAGAAGCCACAGCCAGGATATCCCTGTGATCCCCAACCTGTTTCCAGAGAAGATGAGGAATGGGGTGCTGCAGGACAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CAA 90 bp | TCCTGGGGCGGTTGTAAGAAATGCTGTTCCTACTCACTCCAAAGAACCCTGGTCCGCTGGAGCCTGAGGTaGTATGGAAGGGAGCTGCAG | + |
Preference number: 5 (lower is better) Translates to: SWGGCKKCCSYSLQRTLVRWSLR*YGRELQ Trigger: CTGCAGCTCCCTTCCATACAACCTCAGGCTCCAGCG...GACCAGGGTTCTTTGGAGTGAGTAGGAACAGCATTTCTTACAACCGCCCCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CAA 90 bp | TCCTGGGGCGGTTGTAAGAAATGCTGTTCCTACTCACTCCAAAGAACCCTGGTCGCGGCGACAGTTACATaGGCAGGCAGGAAGGAGCTG | + |
Preference number: 5 (lower is better) Translates to: SWGGCKKCCSYSLQRTLVAATVT*AGRKEL Trigger: CAGCTCCTTCCTGCCTGCCAATGTAACTGTCGCCGC...GACCAGGGTTCTTTGGAGTGAGTAGGAACAGCATTTCTTACAACCGCCCCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CAA 90 bp | ACCAGAGGGCTAAAGAGAGCTAGTCAGTCTTGCCAAATCAGGTCCTGGGGCGGTGGAGTGCTAGGAGCTTaGGCAGCACAGGGTAAATGG | + |
Preference number: 5 (lower is better) Translates to: TRGLKRASQSCQIRSWGGGVLGA*AAQGKW Trigger: CCATTTACCCTGTGCTGCCAAAGCTCCTAGCACTCC...ACCGCCCCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAGCCCTCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CAA 90 bp | AGGGCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCCGGAGTGCTAGGAGCTTaGGCAGCACAGGGTAAATGG | + |
Preference number: 5 (lower is better) Translates to: RALKYCLKRARIDVENCPGVLGA*AAQGKW Trigger: CCATTTACCCTGTGCTGCCAAAGCTCCTAGCACTCC...GGGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CAA 90 bp | ACCAGAGGGCTAAAGAGAGCTAGTCAGTCTTGCCAAATCAGGTCCTGGGGCGGTTCAGCCATCCTCTCTTaGTCTGTGCTGTCCTGCAGC | + |
Preference number: 5 (lower is better) Translates to: TRGLKRASQSCQIRSWGGSAILS*SVLSCS Trigger: GCTGCAGGACAGCACAGACAAAGAGAGGATGGCTGA...ACCGCCCCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAGCCCTCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CAA 90 bp | AGGGCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCCTCAGCCATCCTCTCTTaGTCTGTGCTGTCCTGCAGC | + |
Preference number: 5 (lower is better) Translates to: RALKYCLKRARIDVENCPSAILS*SVLSCS Trigger: GCTGCAGGACAGCACAGACAAAGAGAGGATGGCTGA...GGGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CAA 90 bp | GAGGGCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCTCAGCCATCCTCTCTTaGTCTGTGCTGTCCTGCAGC | + |
Preference number: 5 (lower is better) Translates to: EGPEVLPEEGKDRCGKLSSAILS*SVLSCS Trigger: GCTGCAGGACAGCACAGACAAAGAGAGGATGGCTGA...GGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS TCA 90 bp | CAACGGTATGGTGGCCCCAGCCACGACAAGCATGATAGAGCCCAATaGCAAGGGAGAGGACCAGCAACAGGCCAAATACCACATAGTCCA | + |
Preference number: 5 (lower is better) Translates to: QRYGGPSHDKHDRAQ*QGRGPATGQIPHSP Trigger: TGGACTATGTGGTATTTGGCCTGTTGCTGGTCCTCTCCCTTGTCATTGGGCTCTATCATGCTTGTCGTGGCTGGGGCCACCATACCGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000200816.2 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS GCA 90 bp | CCCAAGCCACCCACTCTGGCTGCTCCTACAATGATCACTACCAGCTaGCCGAGGAACATGACCAGTGTTTGGAACACATCTGTCCAGATG | + |
Preference number: 5 (lower is better) Translates to: PKPPTLAAPTMITTS*PRNMTSVWNTSVQM Trigger: CATCTGGACAGATGTGTTCCAAACACTGGTCATGTTCCTCGGGCAGCTGGTAGTGATCATTGTAGGAGCAGCCAGAGTGGGTGGCTTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 ENSMUST00000202984.2 |
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CDS GCA 90 bp | TGGACGAGGCCATCTTCAGCCATCCTCTCTTTGTCTGTGCTGTCCTaGAGCACCCCATTCCTCATCTTCTCTGGAAACAGGTTGGGGATC | + |
Preference number: 5 (lower is better) Translates to: WTRPSSAILSLSVLS*STPFLIFSGNRLGI Trigger: GATCCCCAACCTGTTTCCAGAGAAGATGAGGAATGGGGTGCTGCAGGACAGCACAGACAAAGAGAGGATGGCTGAAGATGGCCTCGTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS GCA 90 bp | AATGAGGCAGCTCATGCAGAGGGCCACTTGCTGGCAAGGGAACACTaGATAGCAGGAGTTAATCCCAGAGATGAGGCCATGCTGGGAAGT | + |
Preference number: 5 (lower is better) Translates to: NEAAHAEGHLLAREH*IAGVNPRDEAMLGS Trigger: ACTTCCCAGCATGGCCTCATCTCTGGGATTAACTCCTGCTATGCAGTGTTCCCTTGCCAGCAAGTGGCCCTCTGCATGAGCTGCCTCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202984.2 |
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CDS-3UTR CAA 90 bp | CTACAAAATAGCCTCCGGCTGCTGTCTGCAGCGAGGGCAGAGTTCACGCCCCAGACAGTTGCCAGTGAATaGAATGCAGAGGATATGGTG | + |
Preference number: 5 (lower is better) Translates to: LQNSLRLLSAARAEFTPQTVASE*NAEDMV Trigger: CACCATATCCTCTGCATTCAATTCACTGGCAACTGT...CTGGGGCGTGAACTCTGCCCTCGCTGCAGACAGCAGCCGGAGGCTATTTTGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CAA 90 bp | GGAATCACCAGAGGGCTAAAGAGAGCTAGTCAGTCTTGCCAAATCAGGTCCTGGTGCAGTCCTGTGGGCTaGGACAGGGTAGAAGGCATC | + |
Preference number: 5 (lower is better) Translates to: GITRGLKRASQSCQIRSWCSPVG*DRVEGI Trigger: GATGCCTTCTACCCTGTCCAAGCCCACAGGACTGCA...CCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAGCCCTCTGGTGATTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CAA 90 bp | TCCTGGGGCGGTTGTAAGAAATGCTGTTCCTACTCACTCCAAAGAACCCTGGTCATGGCACCAAGAGGGTaGGCGCATGGGAAGAACAGT | + |
Preference number: 5 (lower is better) Translates to: SWGGCKKCCSYSLQRTLVMAPRG*AHGKNS Trigger: ACTGTTCTTCCCATGCGCCAACCCTCTTGGTGCCAT...GACCAGGGTTCTTTGGAGTGAGTAGGAACAGCATTTCTTACAACCGCCCCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CAA 90 bp | GGAATCACCAGAGGGCTAAAGAGAGCTAGTCAGTCTTGCCAAATCAGGTCCTGGGGAGTGCTAGGAGCTTaGGCAGCACAGGGTAAATGG | + |
Preference number: 5 (lower is better) Translates to: GITRGLKRASQSCQIRSWGVLGA*AAQGKW Trigger: CCATTTACCCTGTGCTGCCAAAGCTCCTAGCACTCC...CCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAGCCCTCTGGTGATTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS CCA 90 bp | TTAATCCCAGAGATGAGGCCATGCTGGGAAGTCACATTCCATACATaGCCCAAGCCACCCACTCTGGCTGCTCCTACAATGATCACTACC | + |
Preference number: 5 (lower is better) Translates to: LIPEMRPCWEVTFHT*PKPPTLAAPTMITT Trigger: GGTAGTGATCATTGTAGGAGCAGCCAGAGTGGGTGGCTTGGGCCATGTATGGAATGTGACTTCCCAGCATGGCCTCATCTCTGGGATTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 ENSMUST00000202984.2 |
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CDS-3UTR CAA 90 bp | AAAGCCTCCCTCTCAAGAGTCGAGGTAGGTAAGAATGAGAGAGGACTTGAGTATCGCTGGAGCCTGAGGTaGTATGGAAGGGAGCTGCAG | + |
Preference number: 5 (lower is better) Translates to: KASLSRVEVGKNERGLEYRWSLR*YGRELQ Trigger: CTGCAGCTCCCTTCCATACAACCTCAGGCTCCAGCG...ATACTCAAGTCCTCTCTCATTCTTACCTACCTCGACTCTTGAGAGGGAGGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CAA 90 bp | ACCAGAGGGCTAAAGAGAGCTAGTCAGTCTTGCCAAATCAGGTCCTGGGGCGGTATCCGAACTGCTTTATaGAAGCGGAGCTCTAGGTAC | + |
Preference number: 5 (lower is better) Translates to: TRGLKRASQSCQIRSWGGIRTAL*KRSSRY Trigger: GTACCTAGAGCTCCGCTTCAATAAAGCAGTTCGGAT...ACCGCCCCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAGCCCTCTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CAA 90 bp | AGACCCAAGGATACCAAAGCCTCCCTCTCAAGAGTCGAGGTAGGTAAGAATGAGATGGCACCAAGAGGGTaGGCGCATGGGAAGAACAGT | + |
Preference number: 5 (lower is better) Translates to: RPKDTKASLSRVEVGKNEMAPRG*AHGKNS Trigger: ACTGTTCTTCCCATGCGCCAACCCTCTTGGTGCCAT...CTCATTCTTACCTACCTCGACTCTTGAGAGGGAGGCTTTGGTATCCTTGGGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CAA 90 bp | ACCAATCCTAAGAGAAGCTTGGCAAGGGATGAGGAAAAACTGTCTCGCCCTTGCATGGCACCAAGAGGGTaGGCGCATGGGAAGAACAGT | + |
Preference number: 5 (lower is better) Translates to: TNPKRSLARDEEKLSRPCMAPRG*AHGKNS Trigger: ACTGTTCTTCCCATGCGCCAACCCTCTTGGTGCCAT...GCAAGGGCGAGACAGTTTTTCCTCATCCCTTGCCAAGCTTCTCTTAGGATTGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CAA 90 bp | GTGAGTGAGTCATCTCTGCACTACAAAATAGCCTCCGGCTGCTGTCTGCAGCGAATGACTGTGGTGGAGTaGTGCGCGCTGTACCATAAA | + |
Preference number: 5 (lower is better) Translates to: VSESSLHYKIASGCCLQRMTVVE*CALYHK Trigger: TTTATGGTACAGCGCGCACAACTCCACCACAGTCAT...TCGCTGCAGACAGCAGCCGGAGGCTATTTTGTAGTGCAGAGATGACTCACTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CAA 90 bp | ACCAATCCTAAGAGAAGCTTGGCAAGGGATGAGGAAAAACTGTCTCGCCCTTGCGGAGTGCTAGGAGCTTaGGCAGCACAGGGTAAATGG | + |
Preference number: 5 (lower is better) Translates to: TNPKRSLARDEEKLSRPCGVLGA*AAQGKW Trigger: CCATTTACCCTGTGCTGCCAAAGCTCCTAGCACTCC...GCAAGGGCGAGACAGTTTTTCCTCATCCCTTGCCAAGCTTCTCTTAGGATTGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS TCA 90 bp | TGGGAACCAGGGCTGGATCAGGTCTTCCATCGTGACAGTTGCCAGTaGATTGAATGCAGAGGATATGGTGCTGAGAGATCCACTGAAGAG | + |
Preference number: 5 (lower is better) Translates to: WEPGLDQVFHRDSCQ*IECRGYGAERSTEE Trigger: CTCTTCAGTGGATCTCTCAGCACCATATCCTCTGCATTCAATTCACTGGCAACTGTCACGATGGAAGACCTGATCCAGCCCTGGTTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS CCA 90 bp | GAAAGCATGATGGCCCGAGTTTCAGTCAACTGTGGGAACCAGGGCTaGATCAGGTCTTCCATCGTGACAGTTGCCAGTGAATTGAATGCA | + |
Preference number: 5 (lower is better) Translates to: ESMMARVSVNCGNQG*IRSSIVTVASELNA Trigger: TGCATTCAATTCACTGGCAACTGTCACGATGGAAGACCTGATCCAGCCCTGGTTCCCACAGTTGACTGAAACTCGGGCCATCATGCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CAA 90 bp | AGGGCCCTGAAGTACTGCCTGAAGAGGGCAAGGATCGATGTGGAAAACTGTCCCGAACATGACCAGTGTTaGGAACACATCTGTCCAGAT | + |
Preference number: 5 (lower is better) Translates to: RALKYCLKRARIDVENCPEHDQC*EHICPD Trigger: ATCTGGACAGATGTGTTCCAAACACTGGTCATGTTC...GGGACAGTTTTCCACATCGATCCTTGCCCTCTTCAGGCAGTACTTCAGGGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CAA 90 bp | GTTCCTACTCACTCCAAAGAACCCTGGTCACTTAATCAAATGCCACCCTTTTCTGCGGCGACAGTTACATaGGCAGGCAGGAAGGAGCTG | + |
Preference number: 5 (lower is better) Translates to: VPTHSKEPWSLNQMPPFSAATVT*AGRKEL Trigger: CAGCTCCTTCCTGCCTGCCAATGTAACTGTCGCCGC...AGAAAAGGGTGGCATTTGATTAAGTGACCAGGGTTCTTTGGAGTGAGTAGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CAA 90 bp | GGAATCACCAGAGGGCTAAAGAGAGCTAGTCAGTCTTGCCAAATCAGGTCCTGGATCCGAACTGCTTTATaGAAGCGGAGCTCTAGGTAC | + |
Preference number: 5 (lower is better) Translates to: GITRGLKRASQSCQIRSWIRTAL*KRSSRY Trigger: GTACCTAGAGCTCCGCTTCAATAAAGCAGTTCGGAT...CCAGGACCTGATTTGGCAAGACTGACTAGCTCTCTTTAGCCCTCTGGTGATTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CAA 90 bp | ACCAATCCTAAGAGAAGCTTGGCAAGGGATGAGGAAAAACTGTCTCGCCCTTGCATGACTGTGGTGGAGTaGTGCGCGCTGTACCATAAA | + |
Preference number: 5 (lower is better) Translates to: TNPKRSLARDEEKLSRPCMTVVE*CALYHK Trigger: TTTATGGTACAGCGCGCACAACTCCACCACAGTCAT...GCAAGGGCGAGACAGTTTTTCCTCATCCCTTGCCAAGCTTCTCTTAGGATTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CAA 90 bp | ACCAATCCTAAGAGAAGCTTGGCAAGGGATGAGGAAAAACTGTCTCGCCCTTGCGAACATGACCAGTGTTaGGAACACATCTGTCCAGAT | + |
Preference number: 5 (lower is better) Translates to: TNPKRSLARDEEKLSRPCEHDQC*EHICPD Trigger: ATCTGGACAGATGTGTTCCAAACACTGGTCATGTTC...GCAAGGGCGAGACAGTTTTTCCTCATCCCTTGCCAAGCTTCTCTTAGGATTGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CAA 90 bp | AGACCCAAGGATACCAAAGCCTCCCTCTCAAGAGTCGAGGTAGGTAAGAATGAGACAGTTGCCAGTGAATaGAATGCAGAGGATATGGTG | + |
Preference number: 5 (lower is better) Translates to: RPKDTKASLSRVEVGKNETVASE*NAEDMV Trigger: CACCATATCCTCTGCATTCAATTCACTGGCAACTGT...CTCATTCTTACCTACCTCGACTCTTGAGAGGGAGGCTTTGGTATCCTTGGGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CAA 90 bp | AACAAAATGCATGAAGAGGAAACTCCCAAAGGAAATAATAGTTGCACAGATGACCATGCAGAGGGCCACTaGCTGGCAAGGGAACACTGC | + |
Preference number: 5 (lower is better) Translates to: NKMHEEETPKGNNSCTDDHAEGH*LAREHC Trigger: GCAGTGTTCCCTTGCCAGCAAGTGGCCCTCTGCATG...GTCATCTGTGCAACTATTATTTCCTTTGGGAGTTTCCTCTTCATGCATTTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CAA 90 bp | AACAAAATGCATGAAGAGGAAACTCCCAAAGGAAATAATAGTTGCACAGATGACGCGGCGACAGTTACATaGGCAGGCAGGAAGGAGCTG | + |
Preference number: 5 (lower is better) Translates to: NKMHEEETPKGNNSCTDDAATVT*AGRKEL Trigger: CAGCTCCTTCCTGCCTGCCAATGTAACTGTCGCCGC...GTCATCTGTGCAACTATTATTTCCTTTGGGAGTTTCCTCTTCATGCATTTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CAA 90 bp | GTTCCTACTCACTCCAAAGAACCCTGGTCACTTAATCAAATGCCACCCTTTTCTATGACTGTGGTGGAGTaGTGCGCGCTGTACCATAAA | + |
Preference number: 5 (lower is better) Translates to: VPTHSKEPWSLNQMPPFSMTVVE*CALYHK Trigger: TTTATGGTACAGCGCGCACAACTCCACCACAGTCAT...AGAAAAGGGTGGCATTTGATTAAGTGACCAGGGTTCTTTGGAGTGAGTAGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CAA 90 bp | GTAGGTAAGAATGAGAGAGGACTTGAGTATTACAGAGAACCCGAAAGACCTCAGATCCGAACTGCTTTATaGAAGCGGAGCTCTAGGTAC | + |
Preference number: 5 (lower is better) Translates to: VGKNERGLEYYREPERPQIRTAL*KRSSRY Trigger: GTACCTAGAGCTCCGCTTCAATAAAGCAGTTCGGAT...CTGAGGTCTTTCGGGTTCTCTGTAATACTCAAGTCCTCTCTCATTCTTACCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CAA 90 bp | AAAGCCTCCCTCTCAAGAGTCGAGGTAGGTAAGAATGAGAGAGGACTTGAGTATGAACATGACCAGTGTTaGGAACACATCTGTCCAGAT | + |
Preference number: 5 (lower is better) Translates to: KASLSRVEVGKNERGLEYEHDQC*EHICPD Trigger: ATCTGGACAGATGTGTTCCAAACACTGGTCATGTTC...ATACTCAAGTCCTCTCTCATTCTTACCTACCTCGACTCTTGAGAGGGAGGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CAA 90 bp | AAAGCCTCCCTCTCAAGAGTCGAGGTAGGTAAGAATGAGAGAGGACTTGAGTATACAGTTGCCAGTGAATaGAATGCAGAGGATATGGTG | + |
Preference number: 5 (lower is better) Translates to: KASLSRVEVGKNERGLEYTVASE*NAEDMV Trigger: CACCATATCCTCTGCATTCAATTCACTGGCAACTGT...ATACTCAAGTCCTCTCTCATTCTTACCTACCTCGACTCTTGAGAGGGAGGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CAA 90 bp | AACAAAATGCATGAAGAGGAAACTCCCAAAGGAAATAATAGTTGCACAGATGACGGAAGACAGCCCATTTaGCGGTCTGCCATCAGCAGT | + |
Preference number: 5 (lower is better) Translates to: NKMHEEETPKGNNSCTDDGRQPI*RSAISS Trigger: ACTGCTGATGGCAGACCGCAAAATGGGCTGTCTTCC...GTCATCTGTGCAACTATTATTTCCTTTGGGAGTTTCCTCTTCATGCATTTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS-3UTR CAA 90 bp | GTTCCTACTCACTCCAAAGAACCCTGGTCACTTAATCAAATGCCACCCTTTTCTACAGTTGCCAGTGAATaGAATGCAGAGGATATGGTG | + |
Preference number: 5 (lower is better) Translates to: VPTHSKEPWSLNQMPPFSTVASE*NAEDMV Trigger: CACCATATCCTCTGCATTCAATTCACTGGCAACTGT...AGAAAAGGGTGGCATTTGATTAAGTGACCAGGGTTCTTTGGAGTGAGTAGGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS TCA 72 bp | GAAGATCTCAGCTGGTGCTCCCAGGATGGCCACGGCTaGCTGGAAGGTGGCCAGCAAGGACAGTGCCACAGG | + |
Preference number: 6 (lower is better) Translates to: EDLSWCSQDGHG*LEGGQQGQCHR Trigger: CCTGTGGCACTGTCCTTGCTGGCCACCTTCCAGTCAGCCGTGGCCATCCTGGGAGCACCAGCTGAGATCTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS CAA 90 bp | GGGCTGCACGGCTGGTGGACGAGGCCATCTTCAGCCATCCTCTCTTaGTCTGTGCTGTCCTGCAGCACCCCATTCCTCATCTTCTCTGGA | + |
Preference number: 6 (lower is better) Translates to: GLHGWWTRPSSAILS*SVLSCSTPFLIFSG Trigger: TCCAGAGAAGATGAGGAATGGGGTGCTGCAGGACAGCACAGACAAAGAGAGGATGGCTGAAGATGGCCTCGTCCACCAGCCGTGCAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS TCA 72 bp | GTCCCAGCAGTGGCCCTCCAACCATGCCAAAGATACTaGGTGCTGCCTGGAGCACTGATCCCAGATGAGAGG | + |
Preference number: 6 (lower is better) Translates to: VPAVALQPCQRY*VLPGALIPDER Trigger: CCTCTCATCTGGGATCAGTGCTCCAGGCAGCACTCAGTATCTTTGGCATGGTTGGAGGGCCACTGCTGGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS GCA 72 bp | GGACAGTGCCACAGGAAGACAGCCCATTTTGCGGTCTaGCATCAGCAGTTCACCAACGGTATGGTGGCCCCA | + |
Preference number: 6 (lower is better) Translates to: GQCHRKTAHFAV*HQQFTNGMVAP Trigger: TGGGGCCACCATACCGTTGGTGAACTGCTGATGGCAGACCGCAAAATGGGCTGTCTTCCTGTGGCACTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000200816.2 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS CCA 72 bp | TTCCAAATCGGAAGATCTCAGCTGGTGCTCCCAGGATaGCCACGGCTGACTGGAAGGTGGCCAGCAAGGACA | + |
Preference number: 6 (lower is better) Translates to: FQIGRSQLVLPG*PRLTGRWPART Trigger: TGTCCTTGCTGGCCACCTTCCAGTCAGCCGTGGCCATCCTGGGAGCACCAGCTGAGATCTTCCGATTTGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS CCA 72 bp | ATATCCTGGCTGTGGCTTCTCCAGCAAAGCCGCTTCTaGCAGGATAGGGGCAGGAGTGCTAGGAGCTTTGGC | + |
Preference number: 6 (lower is better) Translates to: ISWLWLLQQSRF*QDRGRSARSFG Trigger: GCCAAAGCTCCTAGCACTCCTGCCCCTATCCTGCCAGAAGCGGCTTTGCTGGAGAAGCCACAGCCAGGATAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS CAA 72 bp | GACCAGACCAATGAGGCAGCTCATGCAGAGGGCCACTaGCTGGCAAGGGAACACTGCATAGCAGGAGAGCAC | + |
Preference number: 6 (lower is better) Translates to: DQTNEAAHAEGH*LAREHCIAGEH Trigger: GTGCTCTCCTGCTATGCAGTGTTCCCTTGCCAGCAAGTGGCCCTCTGCATGAGCTGCCTCATTGGTCTGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS CAA 90 bp | GGCAAACATGACCAGACCAATGAGGCAGCTCATGCAGAGGGCCACTaGCTGGCAAGGGAACACTGCATAGCAGGAGAGCACAGCAGCTCT | + |
Preference number: 6 (lower is better) Translates to: GKHDQTNEAAHAEGH*LAREHCIAGEHSSS Trigger: AGAGCTGCTGTGCTCTCCTGCTATGCAGTGTTCCCTTGCCAGCAAGTGGCCCTCTGCATGAGCTGCCTCATTGGTCTGGTCATGTTTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS TCA 72 bp | GGTGGCCCCAGCCACGACAAGCATGATAGAGCCCAATaGCAAGGGAGAGGACCAGCAACAGGCCAAATACCA | + |
Preference number: 6 (lower is better) Translates to: GGPSHDKHDRAQ*QGRGPATGQIP Trigger: TGGTATTTGGCCTGTTGCTGGTCCTCTCCCTTGTCATTGGGCTCTATCATGCTTGTCGTGGCTGGGGCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000200816.2 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS GCA 72 bp | AGGCAGGAAGGAGCTGGATCCATTAAGGGGAGGGGGTaGCACAGCAGAACTCATCCTGCTTACTATGCTCCC | + |
Preference number: 6 (lower is better) Translates to: RQEGAGSIKGRG*HSRTHPAYYAP Trigger: GGGAGCATAGTAAGCAGGATGAGTTCTGCTGTGGCACCCCCTCCCCTTAATGGATCCAGCTCCTTCCTGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS CAA 90 bp | GTGCTGTCCTGCAGCACCCCATTCCTCATCTTCTCTGGAAACAGGTaGGGGATCACAGGGATATCCTGGCTGTGGCTTCTCCAGCAAAGC | + |
Preference number: 6 (lower is better) Translates to: VLSCSTPFLIFSGNR*GITGISWLWLLQQS Trigger: GCTTTGCTGGAGAAGCCACAGCCAGGATATCCCTGTGATCCCCAACCTGTTTCCAGAGAAGATGAGGAATGGGGTGCTGCAGGACAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS TCA 72 bp | CTAGCCCATAGGCAAAGGCAAGGCCTCGAGAAAGCATaGTGGCCCGAGTTTCAGTCAACTGTGGGAACCAGG | + |
Preference number: 6 (lower is better) Translates to: LAHRQRQGLEKA*WPEFQSTVGTR Trigger: CCTGGTTCCCACAGTTGACTGAAACTCGGGCCATCATGCTTTCTCGAGGCCTTGCCTTTGCCTATGGGCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS GCA 72 bp | CACATTCCATACATGGCCCAAGCCACCCACTCTGGCTaGTCCTACAATGATCACTACCAGCTGCCCGAGGAA | + |
Preference number: 6 (lower is better) Translates to: HIPYMAQATHSG*SYNDHYQLPEE Trigger: TTCCTCGGGCAGCTGGTAGTGATCATTGTAGGAGCAGCCAGAGTGGGTGGCTTGGGCCATGTATGGAATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 ENSMUST00000202984.2 |
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CDS CCA 72 bp | GAGATGAGGCCATGCTGGGAAGTCACATTCCATACATaGCCCAAGCCACCCACTCTGGCTGCTCCTACAATG | + |
Preference number: 6 (lower is better) Translates to: EMRPCWEVTFHT*PKPPTLAAPTM Trigger: CATTGTAGGAGCAGCCAGAGTGGGTGGCTTGGGCCATGTATGGAATGTGACTTCCCAGCATGGCCTCATCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 ENSMUST00000202984.2 |
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CDS CCA 72 bp | TTCTCTGGAAACAGGTTGGGGATCACAGGGATATCCTaGCTGTGGCTTCTCCAGCAAAGCCGCTTCTGGCAG | + |
Preference number: 6 (lower is better) Translates to: FSGNRLGITGIS*LWLLQQSRFWQ Trigger: CTGCCAGAAGCGGCTTTGCTGGAGAAGCCACAGCCAGGATATCCCTGTGATCCCCAACCTGTTTCCAGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS TCA 72 bp | TTACTATGCTCCCAATGCCGATCCAGAAGGCCATGGTaGGTCCCGTCAACAGGCCTACAATGGCACCAAGAG | + |
Preference number: 6 (lower is better) Translates to: LLCSQCRSRRPW*VPSTGLQWHQE Trigger: CTCTTGGTGCCATTGTAGGCCTGTTGACGGGACTCACCATGGCCTTCTGGATCGGCATTGGGAGCATAGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS CCA 72 bp | TCAGGATCCAGGTTAATCCCAGAGATGAGGCCATGCTaGGAAGTCACATTCCATACATGGCCCAAGCCACCC | + |
Preference number: 6 (lower is better) Translates to: SGSRLIPEMRPC*EVTFHTWPKPP Trigger: GGGTGGCTTGGGCCATGTATGGAATGTGACTTCCCAGCATGGCCTCATCTCTGGGATTAACCTGGATCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS CCA 72 bp | ATGGCCCGAGTTTCAGTCAACTGTGGGAACCAGGGCTaGATCAGGTCTTCCATCGTGACAGTTGCCAGTGAA | + |
Preference number: 6 (lower is better) Translates to: MARVSVNCGNQG*IRSSIVTVASE Trigger: TTCACTGGCAACTGTCACGATGGAAGACCTGATCCAGCCCTGGTTCCCACAGTTGACTGAAACTCGGGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS CCA 72 bp | TCGAGAAAGCATGATGGCCCGAGTTTCAGTCAACTGTaGGAACCAGGGCTGGATCAGGTCTTCCATCGTGAC | + |
Preference number: 6 (lower is better) Translates to: SRKHDGPSFSQL*EPGLDQVFHRD Trigger: GTCACGATGGAAGACCTGATCCAGCCCTGGTTCCCACAGTTGACTGAAACTCGGGCCATCATGCTTTCTCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS CAA 72 bp | GATCACTACCAGCTGCCCGAGGAACATGACCAGTGTTaGGAACACATCTGTCCAGATGACAGCCTTCAGCCC | + |
Preference number: 6 (lower is better) Translates to: DHYQLPEEHDQC*EHICPDDSLQP Trigger: GGGCTGAAGGCTGTCATCTGGACAGATGTGTTCCAAACACTGGTCATGTTCCTCGGGCAGCTGGTAGTGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 ENSMUST00000202984.2 |
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CDS CAA 72 bp | GACCAGACCAATGAGGCAGCTCATGCAGAGGGCCACTaGCTGGCAAGGGAACACTGCATAGCAGGAGTTAAT | + |
Preference number: 6 (lower is better) Translates to: DQTNEAAHAEGH*LAREHCIAGVN Trigger: ATTAACTCCTGCTATGCAGTGTTCCCTTGCCAGCAAGTGGCCCTCTGCATGAGCTGCCTCATTGGTCTGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202984.2 |
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CDS CAA 90 bp | GGCAAACATGACCAGACCAATGAGGCAGCTCATGCAGAGGGCCACTaGCTGGCAAGGGAACACTGCATAGCAGGAGTTAATCCCAGAGAT | + |
Preference number: 6 (lower is better) Translates to: GKHDQTNEAAHAEGH*LAREHCIAGVNPRD Trigger: ATCTCTGGGATTAACTCCTGCTATGCAGTGTTCCCTTGCCAGCAAGTGGCCCTCTGCATGAGCTGCCTCATTGGTCTGGTCATGTTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202984.2 |
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CDS GCA 72 bp | CCCACTCTGGCTGCTCCTACAATGATCACTACCAGCTaGCCGAGGAACATGACCAGTGTTTGGAACACATCT | + |
Preference number: 6 (lower is better) Translates to: PTLAAPTMITTS*PRNMTSVWNTS Trigger: AGATGTGTTCCAAACACTGGTCATGTTCCTCGGGCAGCTGGTAGTGATCATTGTAGGAGCAGCCAGAGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 ENSMUST00000202984.2 |
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CDS CCA 72 bp | ATCACTACCAGCTGCCCGAGGAACATGACCAGTGTTTaGAACACATCTGTCCAGATGACAGCCTTCAGCCCA | + |
Preference number: 6 (lower is better) Translates to: ITTSCPRNMTSV*NTSVQMTAFSP Trigger: TGGGCTGAAGGCTGTCATCTGGACAGATGTGTTCCAAACACTGGTCATGTTCCTCGGGCAGCTGGTAGTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 ENSMUST00000202984.2 |
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CDS TCA 72 bp | GGGCTGGATCAGGTCTTCCATCGTGACAGTTGCCAGTaGATTGAATGCAGAGGATATGGTGCTGAGAGATCC | + |
Preference number: 6 (lower is better) Translates to: GLDQVFHRDSCQ*IECRGYGAERS Trigger: GGATCTCTCAGCACCATATCCTCTGCATTCAATTCACTGGCAACTGTCACGATGGAAGACCTGATCCAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 ENSMUST00000202984.2 |
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CDS CAA 90 bp | AACCAGGGCTGGATCAGGTCTTCCATCGTGACAGTTGCCAGTGAATaGAATGCAGAGGATATGGTGCTGAGAGATCCACTGAAGAGACAG | + |
Preference number: 6 (lower is better) Translates to: NQGWIRSSIVTVASE*NAEDMVLRDPLKRQ Trigger: CTGTCTCTTCAGTGGATCTCTCAGCACCATATCCTCTGCATTCAATTCACTGGCAACTGTCACGATGGAAGACCTGATCCAGCCCTGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS TCA 72 bp | GCACTGACAGCCATAAATCAAATCCAGTCACTGCATTaGGGGCCAAGGATGGTGCATAGAGAGCAACTCCCA | + |
Preference number: 6 (lower is better) Translates to: ALTAINQIQSLH*GPRMVHREQLP Trigger: TGGGAGTTGCTCTCTATGCACCATCCTTGGCCCTCAATGCAGTGACTGGATTTGATTTATGGCTGTCAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 ENSMUST00000202984.2 |
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CDS CAA 72 bp | TGGATCAGGTCTTCCATCGTGACAGTTGCCAGTGAATaGAATGCAGAGGATATGGTGCTGAGAGATCCACTG | + |
Preference number: 6 (lower is better) Translates to: WIRSSIVTVASE*NAEDMVLRDPL Trigger: CAGTGGATCTCTCAGCACCATATCCTCTGCATTCAATTCACTGGCAACTGTCACGATGGAAGACCTGATCCA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 ENSMUST00000202984.2 |
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CDS TCA 72 bp | CCTGAGCCTGATTCACTCCATACAAGGAGAGCATCATaGAGACACCTCCAAAGGCCAAAGTCCAGAAAGTAT | + |
Preference number: 6 (lower is better) Translates to: PEPDSLHTRRAS*RHLQRPKSRKY Trigger: ATACTTTCTGGACTTTGGCCTTTGGAGGTGTCTTCATGATGCTCTCCTTGTATGGAGTGAATCAGGCTCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 |
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CDS GCA 72 bp | ATCAAATCCAGTCACTGCATTGAGGGCCAAGGATGGTaGATAGAGAGCAACTCCCATGTATATCACCATCTG | + |
Preference number: 6 (lower is better) Translates to: IKSSHCIEGQGW*IESNSHVYHHL Trigger: CAGATGGTGATATACATGGGAGTTGCTCTCTATGCACCATCCTTGGCCCTCAATGCAGTGACTGGATTTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080431.8 ENSMUST00000114668.7 ENSMUST00000202520.4 ENSMUST00000202556.4 ENSMUST00000202984.2 |