Pregenerated sensors for SLC5A5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000792Ensembl transcript IDs: ENSMUST00000000809.3
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGTGGACATCCCATTTCTCCCTCTGCCTTGGGTCTTCTGTGTGCTaGGCAAGCCCTCTGTCGCGAAGCCACGCGGCTCACCCAGATTAC | + |
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Preference number: 1 (lower is better) Translates to: LWTSHFSLCLGSSVC*ASPLSRSHAAHPDY Trigger: GTAATCTGGGTGAGCCGCGTGGCTTCGCGACAGAGGGCTTGCCCAGCACACAGAAGACCCAAGGCAGAGGGAGAAATGGGATGTCCACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR CCA 90 bp | GGGCAGAGAGCATGGGAGGTGGGGTCTGCAGGGTCTCCTGGAAGCTaGAACGCATTAGCGGAGCCTAGGTGGCTGATCACAGAAGGAACA | + |
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Preference number: 1 (lower is better) Translates to: GQRAWEVGSAGSPGS*NALAEPRWLITEGT Trigger: TGTTCCTTCTGTGATCAGCCACCTAGGCTCCGCTAATGCGTTCCAGCTTCCAGGAGACCCTGCAGACCCCACCTCCCATGCTCTCTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR CCA 90 bp | TCTGTCGCGAAGCCACGCGGCTCACCCAGATTACTTTTATATATTTaGGGGTGGGCAGGGTCTCAGCCTGTAGCTGTGGATGATCTTGAC | + |
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Preference number: 1 (lower is better) Translates to: SVAKPRGSPRLLLYI*GWAGSQPVAVDDLD Trigger: GTCAAGATCATCCACAGCTACAGGCTGAGACCCTGCCCACCCCCAAATATATAAAAGTAATCTGGGTGAGCCGCGTGGCTTCGCGACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR CCA 90 bp | TCTGCAGGGTCTCCTGGAAGCTGGAACGCATTAGCGGAGCCTAGGTaGCTGATCACAGAAGGAACATGTTCTCTGATAGTCTGCAAACCG | + |
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Preference number: 1 (lower is better) Translates to: SAGSPGSWNALAEPR*LITEGTCSLIVCKP Trigger: CGGTTTGCAGACTATCAGAGAACATGTTCCTTCTGTGATCAGCCACCTAGGCTCCGCTAATGCGTTCCAGCTTCCAGGAGACCCTGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR CCA 90 bp | GATGATCTTGACCTCCTGAATCTCTTGCCTCTACCTTCCCAGCGTTaGGGTGACCGCCCTCAGCTTCTCTGCTTGTTAAATGGGAAAACC | + |
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Preference number: 1 (lower is better) Translates to: DDLDLLNLLPLPSQR*GDRPQLLCLLNGKT Trigger: GGTTTTCCCATTTAACAAGCAGAGAAGCTGAGGGCGGTCACCCCAACGCTGGGAAGGTAGAGGCAAGAGATTCAGGAGGTCAAGATCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR CCA 90 bp | TACACAAAAGCTGAAAACAATGCAGCTATTCACCCATCCACCCACTaGGAATGGATGACACACTGTGGTATGTCTTTACAAGACCACTTG | + |
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Preference number: 1 (lower is better) Translates to: YTKAENNAAIHPSTH*EWMTHCGMSLQDHL Trigger: CAAGTGGTCTTGTAAAGACATACCACAGTGTGTCATCCATTCCCAGTGGGTGGATGGGTGAATAGCTGCATTGTTTTCAGCTTTTGTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR-3UTR CCA 90 bp | TTGAGGAGGCAACTCGTCCATCCGTGTCTTGTGAGGGCTCTGAGAATCTGTCCCCAGAGAGGAGGCTGCTaGCCCGAGGCCTGTGATTGG | + |
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Preference number: 2 (lower is better) Translates to: LRRQLVHPCLVRALRICPQRGGC*PEACDW Trigger: CCAATCACAGGCCTCGGGCCAGCAGCCTCCTCTCTG...GGGACAGATTCTCAGAGCCCTCACAAGACACGGATGGACGAGTTGCCTCCTCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR CAA 90 bp | GGGTCTCAGCCTGTAGCTGTGGATGATCTTGACCTCCTGAATCTCTaGCCTCTACCTTCCCAGCGTTGGGGTGACCGCCCTCAGCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: GSQPVAVDDLDLLNL*PLPSQRWGDRPQLL Trigger: GAGAAGCTGAGGGCGGTCACCCCAACGCTGGGAAGGTAGAGGCAAGAGATTCAGGAGGTCAAGATCATCCACAGCTACAGGCTGAGACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR-3UTR GCA 90 bp | ATTTGGGGGTGGGCAGGGTCTCAGCCTGTAGCTGTGGATGATCTTGACCTCCTGATTCAGAGAGGAGGCTaGTGGCCCGAGGCCTGTGAT | + |
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Preference number: 2 (lower is better) Translates to: IWGWAGSQPVAVDDLDLLIQRGG*WPEACD Trigger: ATCACAGGCCTCGGGCCAGCAGCCTCCTCTCTGAAT...CAGGAGGTCAAGATCATCCACAGCTACAGGCTGAGACCCTGCCCACCCCCAAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR-3UTR TCA 90 bp | TTGGGTCTTCTGTGTGCTGGGCAAGCCCTCTGTCGCGAAGCCACGCGGCTCACCATGATCTTGACCTCCTaGATCTCTTGCCTCTACCTT | + |
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Preference number: 2 (lower is better) Translates to: LGLLCAGQALCREATRLTMILTS*ISCLYL Trigger: AAGGTAGAGGCAAGAGATTCAGGAGGTCAAGATCAT...GGTGAGCCGCGTGGCTTCGCGACAGAGGGCTTGCCCAGCACACAGAAGACCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR-3UTR GCA 90 bp | GCAGCTATTCACCCATCCACCCACTGGGAATGGATGACACACTGTGGTATGTCTATGGGAGGTGGGGTCTaGAGGGTCTCCTGGAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: AAIHPSTHWEWMTHCGMSMGGGV*RVSWKL Trigger: CAGCTTCCAGGAGACCCTGCAGACCCCACCTCCCAT...AGACATACCACAGTGTGTCATCCATTCCCAGTGGGTGGATGGGTGAATAGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR CAA 90 bp | CCTCTACCTTCCCAGCGTTGGGGTGACCGCCCTCAGCTTCTCTGCTaGTTAAATGGGAAAACCTCACGGTCTGGAGAAGCTGAGTGTTCT | + |
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Preference number: 2 (lower is better) Translates to: PLPSQRWGDRPQLLC*LNGKTSRSGEAECS Trigger: AGAACACTCAGCTTCTCCAGACCGTGAGGTTTTCCCATTTAACAAGCAGAGAAGCTGAGGGCGGTCACCCCAACGCTGGGAAGGTAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR CAA 90 bp | CAACTCGTCCATCCGTGTCTTGTGAGGGCTCTGAGAATCTGTCCCTaGGCACTTCGCGGAAGCTTCACAATCCTTGGGGCTCTGTGTTCT | + |
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Preference number: 2 (lower is better) Translates to: QLVHPCLVRALRICP*ALRGSFTILGALCS Trigger: AGAACACAGAGCCCCAAGGATTGTGAAGCTTCCGCGAAGTGCCAAGGGACAGATTCTCAGAGCCCTCACAAGACACGGATGGACGAGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR-3UTR CCA 90 bp | CCTCTACCTTCCCAGCGTTGGGGTGACCGCCCTCAGCTTCTCTGCTTGTTAAATAGATGTTTTCCTTGGTaGATAGAGAACCAACCCTCT | + |
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Preference number: 2 (lower is better) Translates to: PLPSQRWGDRPQLLCLLNRCFPW*IENQPS Trigger: AGAGGGTTGGTTCTCTATCCACCAAGGAAAACATCT...ATTTAACAAGCAGAGAAGCTGAGGGCGGTCACCCCAACGCTGGGAAGGTAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR-3UTR CCA 90 bp | ACGCGGCTCACCCAGATTACTTTTATATATTTGGGGGTGGGCAGGGTCTCAGCCTCTCTGCTTGTTAAATaGGAAAACCTCACGGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: TRLTQITFIYLGVGRVSASLLVK*ENLTVW Trigger: CCAGACCGTGAGGTTTTCCCATTTAACAAGCAGAGA...GGCTGAGACCCTGCCCACCCCCAAATATATAAAAGTAATCTGGGTGAGCCGCGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR-3UTR GCA 90 bp | GGCTCACCCAGATTACTTTTATATATTTGGGGGTGGGCAGGGTCTCAGCCTGTATTCTCAGTTGCCTACTaGAATCTACAAGGTCACTGC | + |
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Preference number: 2 (lower is better) Translates to: GSPRLLLYIWGWAGSQPVFSVAY*NLQGHC Trigger: GCAGTGACCTTGTAGATTGCAGTAGGCAACTGAGAA...TACAGGCTGAGACCCTGCCCACCCCCAAATATATAAAAGTAATCTGGGTGAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR-3UTR GCA 90 bp | TCCACCCACTGGGAATGGATGACACACTGTGGTATGTCTTTACAAGACCACTTGAATCTACAAGGTCACTaGGGTTCCAGATGTTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: STHWEWMTHCGMSLQDHLNLQGH*GSRCFP Trigger: AGGAAAACATCTGGAACCGCAGTGACCTTGTAGATT...CAAGTGGTCTTGTAAAGACATACCACAGTGTGTCATCCATTCCCAGTGGGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR-3UTR CCA 90 bp | ACAGAAGGAACATGTTCTCTGATAGTCTGCAAACCGTCAGTCCCTTTGAGGAGGTTACTTTTATATATTTaGGGGTGGGCAGGGTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: TEGTCSLIVCKPSVPLRRLLLYI*GWAGSQ Trigger: CTGAGACCCTGCCCACCCCCAAATATATAAAAGTAA...CCTCCTCAAAGGGACTGACGGTTTGCAGACTATCAGAGAACATGTTCCTTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR CCA 72 bp | ACAGGTGATGGTCCAACCATTCAGAGAGGAGGCTGCTaGCCCGAGGCCTGTGATTGGCTTTCTCGGGCCTCG | + |
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Preference number: 3 (lower is better) Translates to: TGDGPTIQRGGC*PEACDWLSRAS Trigger: CGAGGCCCGAGAAAGCCAATCACAGGCCTCGGGCCAGCAGCCTCCTCTCTGAATGGTTGGACCATCACCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR CCA 72 bp | GCATGGGAGGTGGGGTCTGCAGGGTCTCCTGGAAGCTaGAACGCATTAGCGGAGCCTAGGTGGCTGATCACA | + |
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Preference number: 3 (lower is better) Translates to: AWEVGSAGSPGS*NALAEPRWLIT Trigger: TGTGATCAGCCACCTAGGCTCCGCTAATGCGTTCCAGCTTCCAGGAGACCCTGCAGACCCCACCTCCCATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR TCA 72 bp | CGGGCAGGGCCTCTATCAGCCAAGCTTCTGTACAGGTaGTGGTCCAACCATTCAGAGAGGAGGCTGCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: RAGPLSAKLLYR*WSNHSERRLLA Trigger: GGCCAGCAGCCTCCTCTCTGAATGGTTGGACCATCACCTGTACAGAAGCTTGGCTGATAGAGGCCCTGCCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR CCA 72 bp | CAAAGCACAGGGGTAAAGGGCAGAGAGCATGGGAGGTaGGGTCTGCAGGGTCTCCTGGAAGCTGGAACGCAT | + |
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Preference number: 3 (lower is better) Translates to: QSTGVKGREHGR*GLQGLLEAGTH Trigger: ATGCGTTCCAGCTTCCAGGAGACCCTGCAGACCCCACCTCCCATGCTCTCTGCCCTTTACCCCTGTGCTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR CCA 72 bp | CTGTGTTCTGTGGACATCCCATTTCTCCCTCTGCCTTaGGTCTTCTGTGTGCTGGGCAAGCCCTCTGTCGCG | + |
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Preference number: 3 (lower is better) Translates to: LCSVDIPFLPLP*VFCVLGKPSVA Trigger: CGCGACAGAGGGCTTGCCCAGCACACAGAAGACCCAAGGCAGAGGGAGAAATGGGATGTCCACAGAACACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR CCA 72 bp | CTGTCCCTTGGCACTTCGCGGAAGCTTCACAATCCTTaGGGCTCTGTGTTCTGTGGACATCCCATTTCTCCC | + |
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Preference number: 3 (lower is better) Translates to: LSLGTSRKLHNP*GSVFCGHPISP Trigger: GGGAGAAATGGGATGTCCACAGAACACAGAGCCCCAAGGATTGTGAAGCTTCCGCGAAGTGCCAAGGGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR TCA 72 bp | CCTGAATCTCTTGCCTCTACCTTCCCAGCGTTGGGGTaGCCGCCCTCAGCTTCTCTGCTTGTTAAATGGGAA | + |
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Preference number: 3 (lower is better) Translates to: PESLASTFPALG*PPSASLLVKWE Trigger: TTCCCATTTAACAAGCAGAGAAGCTGAGGGCGGTCACCCCAACGCTGGGAAGGTAGAGGCAAGAGATTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR CCA 72 bp | GACCTCCTGAATCTCTTGCCTCTACCTTCCCAGCGTTaGGGTGACCGCCCTCAGCTTCTCTGCTTGTTAAAT | + |
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Preference number: 3 (lower is better) Translates to: DLLNLLPLPSQR*GDRPQLLCLLN Trigger: ATTTAACAAGCAGAGAAGCTGAGGGCGGTCACCCCAACGCTGGGAAGGTAGAGGCAAGAGATTCAGGAGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR CCA 72 bp | AAGCCACGCGGCTCACCCAGATTACTTTTATATATTTaGGGGTGGGCAGGGTCTCAGCCTGTAGCTGTGGAT | + |
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Preference number: 3 (lower is better) Translates to: KPRGSPRLLLYI*GWAGSQPVAVD Trigger: ATCCACAGCTACAGGCTGAGACCCTGCCCACCCCCAAATATATAAAAGTAATCTGGGTGAGCCGCGTGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR GCA 72 bp | AAACCTCACGGTCTGGAGAAGCTGAGTGTTCTCAGTTaGCTACTGCAATCTACAAGGTCACTGCGGTTCCAG | + |
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Preference number: 3 (lower is better) Translates to: KPHGLEKLSVLS*LLQSTRSLRFQ Trigger: CTGGAACCGCAGTGACCTTGTAGATTGCAGTAGGCAACTGAGAACACTCAGCTTCTCCAGACCGTGAGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR CCA 72 bp | TCTCCTGGAAGCTGGAACGCATTAGCGGAGCCTAGGTaGCTGATCACAGAAGGAACATGTTCTCTGATAGTC | + |
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Preference number: 3 (lower is better) Translates to: SPGSWNALAEPR*LITEGTCSLIV Trigger: GACTATCAGAGAACATGTTCCTTCTGTGATCAGCCACCTAGGCTCCGCTAATGCGTTCCAGCTTCCAGGAGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR-3UTR CAA 90 bp | GCTCTGAGAATCTGTCCCTTGGCACTTCGCGGAAGCTTCACAATCCTTGGGGCTATTACTTTTATATATTaGGGGGTGGGCAGGGTCTCA | + |
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Preference number: 3 (lower is better) Translates to: ALRICPLALRGSFTILGAITFIY*GVGRVS Trigger: TGAGACCCTGCCCACCCCCAAATATATAAAAGTAAT...AGCCCCAAGGATTGTGAAGCTTCCGCGAAGTGCCAAGGGACAGATTCTCAGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR GCA 72 bp | TGGCTGATCACAGAAGGAACATGTTCTCTGATAGTCTaGAAACCGTCAGTCCCTTTGAGGAGGCAACTCGTC | + |
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Preference number: 3 (lower is better) Translates to: WLITEGTCSLIV*KPSVPLRRQLV Trigger: GACGAGTTGCCTCCTCAAAGGGACTGACGGTTTGCAGACTATCAGAGAACATGTTCCTTCTGTGATCAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR TCA 72 bp | ATGCAGCTATTCACCCATCCACCCACTGGGAATGGATaGCACACTGTGGTATGTCTTTACAAGACCACTTGG | + |
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Preference number: 3 (lower is better) Translates to: MQLFTHPPTGNG*HTVVCLYKTTW Trigger: CCAAGTGGTCTTGTAAAGACATACCACAGTGTGTCATCCATTCCCAGTGGGTGGATGGGTGAATAGCTGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR-3UTR CAA 90 bp | AGATTACTTTTATATATTTGGGGGTGGGCAGGGTCTCAGCCTGTAGCTGTGGATGCTGAGTGTTCTCAGTaGCCTACTGCAATCTACAAG | + |
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Preference number: 3 (lower is better) Translates to: RLLLYIWGWAGSQPVAVDAECSQ*PTAIYK Trigger: CTTGTAGATTGCAGTAGGCAACTGAGAACACTCAGC...ATCCACAGCTACAGGCTGAGACCCTGCCCACCCCCAAATATATAAAAGTAATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR CCA 72 bp | TCACCCATCCACCCACTGGGAATGGATGACACACTGTaGTATGTCTTTACAAGACCACTTGGCAATGAAAAA | + |
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Preference number: 3 (lower is better) Translates to: SPIHPLGMDDTL*YVFTRPLGNEK Trigger: TTTTTCATTGCCAAGTGGTCTTGTAAAGACATACCACAGTGTGTCATCCATTCCCAGTGGGTGGATGGGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR CCA 72 bp | GCTGAAAACAATGCAGCTATTCACCCATCCACCCACTaGGAATGGATGACACACTGTGGTATGTCTTTACAA | + |
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Preference number: 3 (lower is better) Translates to: AENNAAIHPSTH*EWMTHCGMSLQ Trigger: TTGTAAAGACATACCACAGTGTGTCATCCATTCCCAGTGGGTGGATGGGTGAATAGCTGCATTGTTTTCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS-3UTR CCA 90 bp | TGCCTTGGGTCTTCTGTGTGCTGGGCAAGCCCTCTGTCGCGAAGCCACGCGGCTACGGTGAAAGAGCCCTaGAGGACCCCACCTCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: CLGSSVCWASPLSRSHAATVKEP*RTPPPS Trigger: GCTGGGAGGTGGGGTCCTCCAGGGCTCTTTCACCGT...AGCCGCGTGGCTTCGCGACAGAGGGCTTGCCCAGCACACAGAAGACCCAAGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS-3UTR GCA 90 bp | TTGAGGAGGCAACTCGTCCATCCGTGTCTTGTGAGGGCTCTGAGAATCTGTCCCGAGACCGTAGCGCGCTaGCTCCGCGGGGACCCCGAG | + |
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Preference number: 4 (lower is better) Translates to: LRRQLVHPCLVRALRICPETVAR*LRGDPE Trigger: CTCGGGGTCCCCGCGGAGGCAGCGCGCTACGGTCTC...GGGACAGATTCTCAGAGCCCTCACAAGACACGGATGGACGAGTTGCCTCCTCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS-3UTR CCA 90 bp | TGCCTAGTGTGTACAAAGCACAGGGGTAAAGGGCAGAGAGCATGGGAGGTGGGGCAGGCGGGTACAGCGTaGCCCCCACGGCCACCCACA | + |
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Preference number: 4 (lower is better) Translates to: CLVCTKHRGKGQRAWEVGQAGTA*PPRPPT Trigger: TGTGGGTGGCCGTGGGGGCCACGCTGTACCCGCCTG...CCCCACCTCCCATGCTCTCTGCCCTTTACCCCTGTGCTTTGTACACACTAGGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS-3UTR TCA 90 bp | ACGCGGCTCACCCAGATTACTTTTATATATTTGGGGGTGGGCAGGGTCTCAGCCGCTGCCGGCCCCCGGTaGAGAAGTCGTCGGCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: TRLTQITFIYLGVGRVSAAAGPR*RSRRRC Trigger: GCAGCGCCGACGACTTCTTCACCGGGGGCCGGCAGC...GGCTGAGACCCTGCCCACCCCCAAATATATAAAAGTAATCTGGGTGAGCCGCGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS-3UTR CCA 90 bp | ACAGGTGATGGTCCAACCATTCAGAGAGGAGGCTGCTGGCCCGAGGCCTGTGATTGGGCAGCACCCCCATaGTCTGCTCTCCAGGCGGGT | + |
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Preference number: 4 (lower is better) Translates to: TGDGPTIQRGGCWPEACDWAAPP*SALQAG Trigger: ACCCGCCTGGAGAGCAGACCATGGGGGTGCTGCCCA...ATCACAGGCCTCGGGCCAGCAGCCTCCTCTCTGAATGGTTGGACCATCACCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS-3UTR GCA 90 bp | ACGCGGCTCACCCAGATTACTTTTATATATTTGGGGGTGGGCAGGGTCTCAGCCGGCACTGCCGCCAGCTaGCGGCCCCCGGTGAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: TRLTQITFIYLGVGRVSAGTAAS*RPPVKK Trigger: CTTCTTCACCGGGGGCCGGCAGCTGGCGGCAGTGCC...GGCTGAGACCCTGCCCACCCCCAAATATATAAAAGTAATCTGGGTGAGCCGCGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS-3UTR GCA 90 bp | CTTGACCTCCTGAATCTCTTGCCTCTACCTTCCCAGCGTTGGGGTGACCGCCCTGCCACAGATGCTGTCTaGCGAGCGAGGTCCCACCAC | + |
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Preference number: 4 (lower is better) Translates to: LDLLNLLPLPSQRWGDRPATDAV*RARSHH Trigger: GTGGTGGGACCTCGCTCGGCAGACAGCATCTGTGGC...AGGGCGGTCACCCCAACGCTGGGAAGGTAGAGGCAAGAGATTCAGGAGGTCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS-3UTR CCA 90 bp | GCACAGGTGGGACACAGGGACTTCAGGGCGGGCAGGGCCTCTATCAGCCAAGCTCGCTGCACCTGGGCTTaGTTCACACCATACATGGAG | + |
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Preference number: 4 (lower is better) Translates to: AQVGHRDFRAGRASISQARCTWA*FTPYME Trigger: CTCCATGTATGGTGTGAACCAAGCCCAGGTGCAGCG...AGCTTGGCTGATAGAGGCCCTGCCCGCCCTGAAGTCCCTGTGTCCCACCTGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS-3UTR TCA 90 bp | GACCTCCTGAATCTCTTGCCTCTACCTTCCCAGCGTTGGGGTGACCGCCCTCAGAGAGGCCAAGCTGGTTaGCAAGCAGGGCAAGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: DLLNLLPLPSQRWGDRPQRGQAG*QAGQAW Trigger: CCAAGCTTGCCCTGCTTGTCAACCAGCTTGGCCTCT...CTGAGGGCGGTCACCCCAACGCTGGGAAGGTAGAGGCAAGAGATTCAGGAGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS-3UTR GCA 90 bp | ATTTGGGGGTGGGCAGGGTCTCAGCCTGTAGCTGTGGATGATCTTGACCTCCTGCGACCCACAGACCGATaGCCGTGGACACCAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: IWGWAGSQPVAVDDLDLLRPTDR*PWTPAA Trigger: TGCTGCTGGTGTCCACGGGCATCGGTCTGTGGGTCG...CAGGAGGTCAAGATCATCCACAGCTACAGGCTGAGACCCTGCCCACCCCCAAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS-3UTR GCA 90 bp | GGCTCACCCAGATTACTTTTATATATTTGGGGGTGGGCAGGGTCTCAGCCTGTAAGAAGTCGTCGGCGCTaGGCTGGCCGCCGCGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: GSPRLLLYIWGWAGSQPVRSRRR*AGRRGP Trigger: TGGCCCGCGGCGGCCAGCGCAGCGCCGACGACTTCT...TACAGGCTGAGACCCTGCCCACCCCCAAATATATAAAAGTAATCTGGGTGAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS-3UTR GCA 90 bp | TTGAGGAGGCAACTCGTCCATCCGTGTCTTGTGAGGGCTCTGAGAATCTGTCCCGTACTGATCGGGGGCTaGGATGCGGCCTGTGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: LRRQLVHPCLVRALRICPVLIGG*DAACEE Trigger: CTCCTCACAGGCCGCATCGCAGCCCCCGATCAGTAC...GGGACAGATTCTCAGAGCCCTCACAAGACACGGATGGACGAGTTGCCTCCTCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS-3UTR GCA 90 bp | ACGCGGCTCACCCAGATTACTTTTATATATTTGGGGGTGGGCAGGGTCTCAGCCCTTTGGGGCCACAGATaGTGTCTGCCGAGCGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: TRLTQITFIYLGVGRVSALWGHR*CLPSEV Trigger: GACCTCGCTCGGCAGACAGCATCTGTGGCCCCAAAG...GGCTGAGACCCTGCCCACCCCCAAATATATAAAAGTAATCTGGGTGAGCCGCGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS-3UTR CCA 90 bp | ATTTGGGGGTGGGCAGGGTCTCAGCCTGTAGCTGTGGATGATCTTGACCTCCTGGGTTCACACCATACATaGAGAGCCACACCAGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: IWGWAGSQPVAVDDLDLLGSHHT*RATPGS Trigger: GCTCCCTGGTGTGGCTCTCCATGTATGGTGTGAACC...CAGGAGGTCAAGATCATCCACAGCTACAGGCTGAGACCCTGCCCACCCCCAAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS-3UTR CCA 90 bp | TGCCTAGTGTGTACAAAGCACAGGGGTAAAGGGCAGAGAGCATGGGAGGTGGGGAGGAAGAGGCCAAGCTaGTTGACAAGCAGGGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CLVCTKHRGKGQRAWEVGRKRPS*LTSRAS Trigger: GCTTGCCCTGCTTGTCAACCAGCTTGGCCTCTTCCT...CCCCACCTCCCATGCTCTCTGCCCTTTACCCCTGTGCTTTGTACACACTAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS-3UTR CCA 90 bp | CCTCACGGTCTGGAGAAGCTGAGTGTTCTCAGTTGCCTACTGCAATCTACAAGGGTGGGTCTCGGCTTCTaGCCTGAAGCCAGGGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PHGLEKLSVLSCLLQSTRVGLGF*PEARGL Trigger: AAGCCCCCTGGCTTCAGGCCAGAAGCCGAGACCCAC...CCTTGTAGATTGCAGTAGGCAACTGAGAACACTCAGCTTCTCCAGACCGTGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR CAA 72 bp | CCTGTAGCTGTGGATGATCTTGACCTCCTGAATCTCTaGCCTCTACCTTCCCAGCGTTGGGGTGACCGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PVAVDDLDLLNL*PLPSQRWGDRP Trigger: AGGGCGGTCACCCCAACGCTGGGAAGGTAGAGGCAAGAGATTCAGGAGGTCAAGATCATCCACAGCTACAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR CAA 72 bp | TCCCAGCGTTGGGGTGACCGCCCTCAGCTTCTCTGCTaGTTAAATGGGAAAACCTCACGGTCTGGAGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SQRWGDRPQLLC*LNGKTSRSGEA Trigger: AGCTTCTCCAGACCGTGAGGTTTTCCCATTTAACAAGCAGAGAAGCTGAGGGCGGTCACCCCAACGCTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS-3UTR GCA 90 bp | CCTCACGGTCTGGAGAAGCTGAGTGTTCTCAGTTGCCTACTGCAATCTACAAGGTGTGGACAGGAGCGATaGCCAGATGTCCAACCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: PHGLEKLSVLSCLLQSTRCGQER*PDVQPG Trigger: ACCGGGTTGGACATCTGGGCATCGCTCCTGTCCACA...CCTTGTAGATTGCAGTAGGCAACTGAGAACACTCAGCTTCTCCAGACCGTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS-3UTR CCA 90 bp | TCCACCCACTGGGAATGGATGACACACTGTGGTATGTCTTTACAAGACCACTTGCCCAGATACAGGGGGTaGGTCTCGGCTTCTGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: STHWEWMTHCGMSLQDHLPRYRG*VSASGL Trigger: CAGGCCAGAAGCCGAGACCCACCCCCTGTATCTGGG...CAAGTGGTCTTGTAAAGACATACCACAGTGTGTCATCCATTCCCAGTGGGTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS-3UTR CCA 90 bp | GTTGCCTACTGCAATCTACAAGGTCACTGCGGTTCCAGATGTTTTCCTTGGTGGAACTGGGGATCCCTCTaGAAGTGTTGGCAGCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VAYCNLQGHCGSRCFPWWNWGSL*KCWQLR Trigger: CCGGAGCTGCCAACACTTCCAGAGGGATCCCCAGTT...CCACCAAGGAAAACATCTGGAACCGCAGTGACCTTGTAGATTGCAGTAGGCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS-3UTR CCA 90 bp | CCCATCCACCCACTGGGAATGGATGACACACTGTGGTATGTCTTTACAAGACCAGGTGGTGTCCTCCTTTaGGGCCACAGATGCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PIHPLGMDDTLWYVFTRPGGVLL*GHRCCL Trigger: CAGACAGCATCTGTGGCCCCAAAGGAGGACACCACC...TGGTCTTGTAAAGACATACCACAGTGTGTCATCCATTCCCAGTGGGTGGATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS-3UTR GCA 90 bp | TTCTCAGTTGCCTACTGCAATCTACAAGGTCACTGCGGTTCCAGATGTTTTCCTGGGACCCCGAGCACCTaGACAGCCGACATGAAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: FSVAYCNLQGHCGSRCFPGTPST*TADMKL Trigger: TAGCTTCATGTCGGCTGTGCAGGTGCTCGGGGTCCC...AGGAAAACATCTGGAACCGCAGTGACCTTGTAGATTGCAGTAGGCAACTGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS-3UTR TCA 90 bp | GGCTCACCCAGATTACTTTTATATATTTGGGGGTGGGCAGGGTCTCAGCCTGTATCACTTGGTTCAGGATaGGCGCAGGTGCGTAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: GSPRLLLYIWGWAGSQPVSLGSG*AQVRRS Trigger: TGATCTACGCACCTGCGCTCATCCTGAACCAAGTGA...TACAGGCTGAGACCCTGCCCACCCCCAAATATATAAAAGTAATCTGGGTGAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS-3UTR TCA 90 bp | CAATGCAGCTATTCACCCATCCACCCACTGGGAATGGATGACACACTGTGGTATTGTACAAGGTGCAGATaGTTCCTGTGGACAGGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: QCSYSPIHPLGMDDTLWYCTRCR*FLWTGA Trigger: CGCTCCTGTCCACAGGAATCATCTGCACCTTGTACA...ATACCACAGTGTGTCATCCATTCCCAGTGGGTGGATGGGTGAATAGCTGCATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS-3UTR GCA 90 bp | GAGGAGGCAACTCGTCCATCCGTGTCTTGTGAGGGCTCTGAGAATCTGTCCCTTAATTCCACAGCAAGCTaGACTAGCCACAATCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: EEATRPSVSCEGSENLSLNSTAS*TSHNQE Trigger: TTCCTGATTGTGGCTAGTGCAGCTTGCTGTGGAATT...AAGGGACAGATTCTCAGAGCCCTCACAAGACACGGATGGACGAGTTGCCTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| 3UTR CAA 72 bp | AAAACCTCACGGTCTGGAGAAGCTGAGTGTTCTCAGTaGCCTACTGCAATCTACAAGGTCACTGCGGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KTSRSGEAECSQ*PTAIYKVTAVP Trigger: TGGAACCGCAGTGACCTTGTAGATTGCAGTAGGCAACTGAGAACACTCAGCTTCTCCAGACCGTGAGGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS-3UTR CCA 90 bp | GGCTCACCCAGATTACTTTTATATATTTGGGGGTGGGCAGGGTCTCAGCCTGTAAGCATTACCACAACCTaGAACACATCTGTCCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: GSPRLLLYIWGWAGSQPVSITTT*NTSVQT Trigger: GGTCTGGACAGATGTGTTCCAGGTTGTGGTAATGCT...TACAGGCTGAGACCCTGCCCACCCCCAAATATATAAAAGTAATCTGGGTGAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS CCA 90 bp | GCCGCCAGCTGCCGGCCCCCGGTGAAGAAGTCGTCGGCGCTGCGCTaGCCGCCGCGGGCCAGGCCGACCCACAGACCGATGCCCGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: AASCRPPVKKSSALR*PPRARPTHRPMPVD Trigger: GTCCACGGGCATCGGTCTGTGGGTCGGCCTGGCCCGCGGCGGCCAGCGCAGCGCCGACGACTTCTTCACCGGGGGCCGGCAGCTGGCGGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS CCA 90 bp | TGCGCTGGCCGCCGCGGGCCAGGCCGACCCACAGACCGATGCCCGTaGACACCAGCAGCATGGTCGCGAACACGCCGTAGTCCCAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CAGRRGPGRPTDRCP*TPAAWSRTRRSPRG Trigger: GCCCCTGGGACTACGGCGTGTTCGCGACCATGCTGCTGGTGTCCACGGGCATCGGTCTGTGGGTCGGCCTGGCCCGCGGCGGCCAGCGCA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS CCA 90 bp | GGGCCAGGCCGACCCACAGACCGATGCCCGTGGACACCAGCAGCATaGTCGCGAACACGCCGTAGTCCCAGGGGCCGAAGGTGGCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GPGRPTDRCPWTPAA*SRTRRSPRGRRWPG Trigger: CCCGGGCCACCTTCGGCCCCTGGGACTACGGCGTGTTCGCGACCATGCTGCTGGTGTCCACGGGCATCGGTCTGTGGGTCGGCCTGGCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS GCA 90 bp | GCATTGGTGCATCCCGCAGCCGAGGTGGGCAGCACCCCCATGGTCTaGTCTCCAGGCGGGTACAGCGTGGCCCCCACGGCCACCCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: ALVHPAAEVGSTPMV*SPGGYSVAPTATHR Trigger: CCTGTGGGTGGCCGTGGGGGCCACGCTGTACCCGCCTGGAGAGCAGACCATGGGGGTGCTGCCCACCTCGGCTGCGGGATGCACCAATGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS CCA 90 bp | CAGAGGCATTGGTGCATCCCGCAGCCGAGGTGGGCAGCACCCCCATaGTCTGCTCTCCAGGCGGGTACAGCGTGGCCCCCACGGCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: QRHWCIPQPRWAAPP*SALQAGTAWPPRPP Trigger: GGGTGGCCGTGGGGGCCACGCTGTACCCGCCTGGAGAGCAGACCATGGGGGTGCTGCCCACCTCGGCTGCGGGATGCACCAATGCCTCTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS CCA 90 bp | GTGGGCTCGGGAGGACAGAGGCATTGGTGCATCCCGCAGCCGAGGTaGGCAGCACCCCCATGGTCTGCTCTCCAGGCGGGTACAGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VGSGGQRHWCIPQPR*AAPPWSALQAGTAW Trigger: CCACGCTGTACCCGCCTGGAGAGCAGACCATGGGGGTGCTGCCCACCTCGGCTGCGGGATGCACCAATGCCTCTGTCCTCCCGAGCCCAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS GCA 90 bp | AAGTGTTGGCAGCTCCGGGTGGGCTCGGGAGGACAGAGGCATTGGTaGATCCCGCAGCCGAGGTGGGCAGCACCCCCATGGTCTGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KCWQLRVGSGGQRHW*IPQPRWAAPPWSAL Trigger: GAGAGCAGACCATGGGGGTGCTGCCCACCTCGGCTGCGGGATGCACCAATGCCTCTGTCCTCCCGAGCCCACCCGGAGCTGCCAACACTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS CCA 90 bp | AGGTGGGCAGCACCCCCATGGTCTGCTCTCCAGGCGGGTACAGCGTaGCCCCCACGGCCACCCACAGGGATACAGCTAAGCCTGCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RWAAPPWSALQAGTA*PPRPPTGIQLSLLS Trigger: TGACAGCAGGCTTAGCTGTATCCCTGTGGGTGGCCGTGGGGGCCACGCTGTACCCGCCTGGAGAGCAGACCATGGGGGTGCTGCCCACCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS GCA 90 bp | TCCTCCAGGGTGGTGGTGTCCTCCTTTGGGGCCACAGATGCTGTCTaGCGAGCGAGGTCCCACCACAGTAATCCGGGGCCCAGGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSRVVVSSFGATDAV*RARSHHSNPGPREL Trigger: CAGCTCCCTGGGCCCCGGATTACTGTGGTGGGACCTCGCTCGGCAGACAGCATCTGTGGCCCCAAAGGAGGACACCACCACCCTGGAGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS GCA 90 bp | CAACTGGCCCACGCACATCCACAGAAACTTGAGACCGTAGCGCGCTaGCTCCGCGGGGACCCCGAGCACCTGCACAGCCGACATGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: QLAHAHPQKLETVAR*LRGDPEHLHSRHEA Trigger: AGCTTCATGTCGGCTGTGCAGGTGCTCGGGGTCCCCGCGGAGGCAGCGCGCTACGGTCTCAAGTTTCTGTGGATGTGCGTGGGCCAGTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS CCA 90 bp | AAAAGGTGTCGGCAAAGGCTGGGCGGCCCGAGTCCATTCCAGAACTaGGGATCCCTCTGGAAGTGTTGGCAGCTCCGGGTGGGCTCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: KRCRQRLGGPSPFQN*GSLWKCWQLRVGSG Trigger: TCCCGAGCCCACCCGGAGCTGCCAACACTTCCAGAGGGATCCCCAGTTCTGGAATGGACTCGGGCCGCCCAGCCTTTGCCGACACCTTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS-3UTR CAA 90 bp | CTTGACCTCCTGAATCTCTTGCCTCTACCTTCCCAGCGTTGGGGTGACCGCCCTAGGACGCCTGGCGTGTaGCAGGCTGGGAGCAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: LDLLNLLPLPSQRWGDRPRTPGV*QAGSSI Trigger: GATGCTGCTCCCAGCCTGCAACACGCCAGGCGTCCT...AGGGCGGTCACCCCAACGCTGGGAAGGTAGAGGCAAGAGATTCAGGAGGTCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS-3UTR CAA 90 bp | CCACGCGGCTCACCCAGATTACTTTTATATATTTGGGGGTGGGCAGGGTCTCAGGGGAGGACAGAGGCATaGGTGCATCCCGCAGCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: PRGSPRLLLYIWGWAGSQGRTEA*VHPAAE Trigger: CTCGGCTGCGGGATGCACCAATGCCTCTGTCCTCCC...CTGAGACCCTGCCCACCCCCAAATATATAAAAGTAATCTGGGTGAGCCGCGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS TCA 90 bp | AGACCACGGCCTTCATACCACCCACGGTCGTGTACAAGGTGCAGATaGTTCCTGTGGACAGGAGCGATGCCCAGATGTCCAACCCGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RPRPSYHPRSCTRCR*FLWTGAMPRCPTRS Trigger: TGACCGGGTTGGACATCTGGGCATCGCTCCTGTCCACAGGAATCATCTGCACCTTGTACACGACCGTGGGTGGTATGAAGGCCGTGGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS GCA 90 bp | CACGGTCGTGTACAAGGTGCAGATGATTCCTGTGGACAGGAGCGATaGCCAGATGTCCAACCCGGTCACTTGGTTCAGGATGAGCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HGRVQGADDSCGQER*PDVQPGHLVQDERR Trigger: CCTGCGCTCATCCTGAACCAAGTGACCGGGTTGGACATCTGGGCATCGCTCCTGTCCACAGGAATCATCTGCACCTTGTACACGACCGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS CCA 90 bp | CCCGTAGTAGAGATAGGAGACAGCATAAAAGGTGTCGGCAAAGGCTaGGCGGCCCGAGTCCATTCCAGAACTGGGGATCCCTCTGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: PVVEIGDSIKGVGKG*AARVHSRTGDPSGS Trigger: ACTTCCAGAGGGATCCCCAGTTCTGGAATGGACTCGGGCCGCCCAGCCTTTGCCGACACCTTTTATGCTGTCTCCTATCTCTACTACGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS-3UTR CAA 90 bp | GATCTTGACCTCCTGAATCTCTTGCCTCTACCTTCCCAGCGTTGGGGTGACCGCACGCTGCACCTGGGCTaGGTTCACACCATACATGGA | + |
|
Preference number: 5 (lower is better) Translates to: DLDLLNLLPLPSQRWGDRTLHLG*VHTIHG Trigger: TCCATGTATGGTGTGAACCAAGCCCAGGTGCAGCGT...GCGGTCACCCCAACGCTGGGAAGGTAGAGGCAAGAGATTCAGGAGGTCAAGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS GCA 90 bp | TGCCCAGATGTCCAACCCGGTCACTTGGTTCAGGATGAGCGCAGGTaGGTAGATCACGATGCCAGTATACAGCATCGTGGCCACCAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: CPDVQPGHLVQDERR*VDHDASIQHRGHQV Trigger: TACTTGGTGGCCACGATGCTGTATACTGGCATCGTGATCTACGCACCTGCGCTCATCCTGAACCAAGTGACCGGGTTGGACATCTGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS-3UTR CAA 90 bp | GCTCTGAGAATCTGTCCCTTGGCACTTCGCGGAAGCTTCACAATCCTTGGGGCTCTAGGCATCCTGGGCTaGATGAGGTCTTCCACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: ALRICPLALRGSFTILGALGILG*MRSSTV Trigger: AACTGTGGAAGACCTCATCAAGCCCAGGATGCCTAG...AGCCCCAAGGATTGTGAAGCTTCCGCGAAGTGCCAAGGGACAGATTCTCAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS GCA 90 bp | GTCGCAGTCCTTGTAGTAGACAAACATGACAATTCCACAGCAAGCTaGACTAGCCACAATCAGGAAGAGGCCAAGCTGGTTGACAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VAVLVVDKHDNSTAS*TSHNQEEAKLVDKQ Trigger: CTGCTTGTCAACCAGCTTGGCCTCTTCCTGATTGTGGCTAGTGCAGCTTGCTGTGGAATTGTCATGTTTGTCTACTACAAGGACTGCGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS GCA 72 bp | GCGGCCAGCGACAGCCCCACAGGCACTGCCGCCAGCTaGCGGCCCCCGGTGAAGAAGTCGTCGGCGCTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: AASDSPTGTAAS*RPPVKKSSALR Trigger: GCGCAGCGCCGACGACTTCTTCACCGGGGGCCGGCAGCTGGCGGCAGTGCCTGTGGGGCTGTCGCTGGCCGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS CCA 72 bp | TGCCGGCCCCCGGTGAAGAAGTCGTCGGCGCTGCGCTaGCCGCCGCGGGCCAGGCCGACCCACAGACCGATG | + |
|
Preference number: 6 (lower is better) Translates to: CRPPVKKSSALR*PPRARPTHRPM Trigger: CATCGGTCTGTGGGTCGGCCTGGCCCGCGGCGGCCAGCGCAGCGCCGACGACTTCTTCACCGGGGGCCGGCA 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS GCA 72 bp | GCTGGCCGCCGCGGGCCAGGCCGACCCACAGACCGATaGCCGTGGACACCAGCAGCATGGTCGCGAACACGC | + |
|
Preference number: 6 (lower is better) Translates to: AGRRGPGRPTDR*PWTPAAWSRTR Trigger: GCGTGTTCGCGACCATGCTGCTGGTGTCCACGGGCATCGGTCTGTGGGTCGGCCTGGCCCGCGGCGGCCAGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS GCA 72 bp | CATCCCGCAGCCGAGGTGGGCAGCACCCCCATGGTCTaGTCTCCAGGCGGGTACAGCGTGGCCCCCACGGCC | + |
|
Preference number: 6 (lower is better) Translates to: HPAAEVGSTPMV*SPGGYSVAPTA Trigger: GGCCGTGGGGGCCACGCTGTACCCGCCTGGAGAGCAGACCATGGGGGTGCTGCCCACCTCGGCTGCGGGATG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS GCA 72 bp | CAGCTCCGGGTGGGCTCGGGAGGACAGAGGCATTGGTaGATCCCGCAGCCGAGGTGGGCAGCACCCCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: QLRVGSGGQRHW*IPQPRWAAPPW Trigger: CCATGGGGGTGCTGCCCACCTCGGCTGCGGGATGCACCAATGCCTCTGTCCTCCCGAGCCCACCCGGAGCTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS CCA 72 bp | CGCCGCGGGCCAGGCCGACCCACAGACCGATGCCCGTaGACACCAGCAGCATGGTCGCGAACACGCCGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: RRGPGRPTDRCP*TPAAWSRTRRS Trigger: ACTACGGCGTGTTCGCGACCATGCTGCTGGTGTCCACGGGCATCGGTCTGTGGGTCGGCCTGGCCCGCGGCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS CCA 72 bp | TGGCAGCTCCGGGTGGGCTCGGGAGGACAGAGGCATTaGTGCATCCCGCAGCCGAGGTGGGCAGCACCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: WQLRVGSGGQRH*CIPQPRWAAPP Trigger: TGGGGGTGCTGCCCACCTCGGCTGCGGGATGCACCAATGCCTCTGTCCTCCCGAGCCCACCCGGAGCTGCCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS CAA 90 bp | CTGGAAGTGTTGGCAGCTCCGGGTGGGCTCGGGAGGACAGAGGCATaGGTGCATCCCGCAGCCGAGGTGGGCAGCACCCCCATGGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LEVLAAPGGLGRTEA*VHPAAEVGSTPMVC Trigger: GCAGACCATGGGGGTGCTGCCCACCTCGGCTGCGGGATGCACCAATGCCTCTGTCCTCCCGAGCCCACCCGGAGCTGCCAACACTTCCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS CCA 72 bp | CGACCCACAGACCGATGCCCGTGGACACCAGCAGCATaGTCGCGAACACGCCGTAGTCCCAGGGGCCGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RPTDRCPWTPAA*SRTRRSPRGRR Trigger: CCTTCGGCCCCTGGGACTACGGCGTGTTCGCGACCATGCTGCTGGTGTCCACGGGCATCGGTCTGTGGGTCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS CCA 72 bp | GCACCCCCATGGTCTGCTCTCCAGGCGGGTACAGCGTaGCCCCCACGGCCACCCACAGGGATACAGCTAAGC | + |
|
Preference number: 6 (lower is better) Translates to: APPWSALQAGTA*PPRPPTGIQLS Trigger: GCTTAGCTGTATCCCTGTGGGTGGCCGTGGGGGCCACGCTGTACCCGCCTGGAGAGCAGACCATGGGGGTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS CCA 72 bp | GGAGGACAGAGGCATTGGTGCATCCCGCAGCCGAGGTaGGCAGCACCCCCATGGTCTGCTCTCCAGGCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GGQRHWCIPQPR*AAPPWSALQAG Trigger: ACCCGCCTGGAGAGCAGACCATGGGGGTGCTGCCCACCTCGGCTGCGGGATGCACCAATGCCTCTGTCCTCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS GCA 72 bp | CACGCACATCCACAGAAACTTGAGACCGTAGCGCGCTaGCTCCGCGGGGACCCCGAGCACCTGCACAGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: HAHPQKLETVAR*LRGDPEHLHSR Trigger: TCGGCTGTGCAGGTGCTCGGGGTCCCCGCGGAGGCAGCGCGCTACGGTCTCAAGTTTCTGTGGATGTGCGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS CCA 72 bp | GGCGGCCCGAGTCCATTCCAGAACTGGGGATCCCTCTaGAAGTGTTGGCAGCTCCGGGTGGGCTCGGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GGPSPFQNWGSL*KCWQLRVGSGG Trigger: TCCTCCCGAGCCCACCCGGAGCTGCCAACACTTCCAGAGGGATCCCCAGTTCTGGAATGGACTCGGGCCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
||
| CDS CAA 72 bp | AAGCCTGCTGTCAGCCCGGAGAGGACGCCTGGCGTGTaGCAGGCTGGGAGCAGCATCCCGAGGGTGAAAGCG | + |
|
Preference number: 6 (lower is better) Translates to: KPAVSPERTPGV*QAGSSIPRVKA Trigger: CGCTTTCACCCTCGGGATGCTGCTCCCAGCCTGCAACACGCCAGGCGTCCTCTCCGGGCTGACAGCAGGCTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS GCA 72 bp | GTGGTGGTGTCCTCCTTTGGGGCCACAGATGCTGTCTaGCGAGCGAGGTCCCACCACAGTAATCCGGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: VVVSSFGATDAV*RARSHHSNPGP Trigger: GGGCCCCGGATTACTGTGGTGGGACCTCGCTCGGCAGACAGCATCTGTGGCCCCAAAGGAGGACACCACCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS CCA 72 bp | CGGCAAAGGCTGGGCGGCCCGAGTCCATTCCAGAACTaGGGATCCCTCTGGAAGTGTTGGCAGCTCCGGGTG | + |
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Preference number: 6 (lower is better) Translates to: RQRLGGPSPFQN*GSLWKCWQLRV Trigger: CACCCGGAGCTGCCAACACTTCCAGAGGGATCCCCAGTTCTGGAATGGACTCGGGCCGCCCAGCCTTTGCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS CAA 90 bp | TACAGGGGGTGGGTCTCGGCTTCTGGCCTGAAGCCAGGGGGCTTCTaGGTCGCAGCAGGGATGTCTTCCGGTCCCTTAACCAGGCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: YRGWVSASGLKPGGF*VAAGMSSGPLTRLS Trigger: GGACAGCCTGGTTAAGGGACCGGAAGACATCCCTGCTGCGACCAAGAAGCCCCCTGGCTTCAGGCCAGAAGCCGAGACCCACCCCCTGTA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS GCA 72 bp | ACGATGCCAGTATACAGCATCGTGGCCACCAAGTACTaGAGCGTCCCGCAGAGCCGGACCGCTCGGCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: TMPVYSIVATKY*SVPQSRTARLK Trigger: CTTCAGCCGAGCGGTCCGGCTCTGCGGGACGCTGCAGTACTTGGTGGCCACGATGCTGTATACTGGCATCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS CAA 72 bp | GAGTCCATTCCAGAACTGGGGATCCCTCTGGAAGTGTaGGCAGCTCCGGGTGGGCTCGGGAGGACAGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: ESIPELGIPLEV*AAPGGLGRTEA Trigger: TGCCTCTGTCCTCCCGAGCCCACCCGGAGCTGCCAACACTTCCAGAGGGATCCCCAGTTCTGGAATGGACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS CAA 72 bp | TGGGTCTCGGCTTCTGGCCTGAAGCCAGGGGGCTTCTaGGTCGCAGCAGGGATGTCTTCCGGTCCCTTAACC | + |
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Preference number: 6 (lower is better) Translates to: WVSASGLKPGGF*VAAGMSSGPLT Trigger: GGTTAAGGGACCGGAAGACATCCCTGCTGCGACCAAGAAGCCCCCTGGCTTCAGGCCAGAAGCCGAGACCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS CCA 72 bp | AGTCCATTCCAGAACTGGGGATCCCTCTGGAAGTGTTaGCAGCTCCGGGTGGGCTCGGGAGGACAGAGGCAT | + |
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Preference number: 6 (lower is better) Translates to: SPFQNWGSLWKC*QLRVGSGGQRH Trigger: ATGCCTCTGTCCTCCCGAGCCCACCCGGAGCTGCCAACACTTCCAGAGGGATCCCCAGTTCTGGAATGGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS CAA 72 bp | ACCAGCTTCCGGGGTGCCAGGCTAGGCATCCTGGGCTaGATGAGGTCTTCCACAGTTACAGCTGCCATAGCG | + |
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Preference number: 6 (lower is better) Translates to: TSFRGARLGILG*MRSSTVTAAIA Trigger: CGCTATGGCAGCTGTAACTGTGGAAGACCTCATCAAGCCCAGGATGCCTAGCCTGGCACCCCGGAAGCTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS TCA 72 bp | ATGGCATGTACTGATCGGGGGCTGCGATGCGGCCTGTaGGGAGGGGGTCGCAGTCCTTGTAGTAGACAAACA | + |
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Preference number: 6 (lower is better) Translates to: MACTDRGLRCGL*GGGRSPCSRQT Trigger: TGTTTGTCTACTACAAGGACTGCGACCCCCTCCTCACAGGCCGCATCGCAGCCCCCGATCAGTACATGCCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS CCA 72 bp | GAGATAGGAGACAGCATAAAAGGTGTCGGCAAAGGCTaGGCGGCCCGAGTCCATTCCAGAACTGGGGATCCC | + |
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Preference number: 6 (lower is better) Translates to: EIGDSIKGVGKG*AARVHSRTGDP Trigger: GGGATCCCCAGTTCTGGAATGGACTCGGGCCGCCCAGCCTTTGCCGACACCTTTTATGCTGTCTCCTATCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS GCA 72 bp | GTCCAACCCGGTCACTTGGTTCAGGATGAGCGCAGGTaGGTAGATCACGATGCCAGTATACAGCATCGTGGC | + |
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Preference number: 6 (lower is better) Translates to: VQPGHLVQDERR*VDHDASIQHRG Trigger: GCCACGATGCTGTATACTGGCATCGTGATCTACGCACCTGCGCTCATCCTGAACCAAGTGACCGGGTTGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS TCA 72 bp | CCTTCATACCACCCACGGTCGTGTACAAGGTGCAGATaGTTCCTGTGGACAGGAGCGATGCCCAGATGTCCA | + |
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Preference number: 6 (lower is better) Translates to: PSYHPRSCTRCR*FLWTGAMPRCP Trigger: TGGACATCTGGGCATCGCTCCTGTCCACAGGAATCATCTGCACCTTGTACACGACCGTGGGTGGTATGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS TCA 72 bp | ATGCCCAGATGTCCAACCCGGTCACTTGGTTCAGGATaGGCGCAGGTGCGTAGATCACGATGCCAGTATACA | + |
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Preference number: 6 (lower is better) Translates to: MPRCPTRSLGSG*AQVRRSRCQYT Trigger: TGTATACTGGCATCGTGATCTACGCACCTGCGCTCATCCTGAACCAAGTGACCGGGTTGGACATCTGGGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS GCA 72 bp | GTACAAGGTGCAGATGATTCCTGTGGACAGGAGCGATaGCCAGATGTCCAACCCGGTCACTTGGTTCAGGAT | + |
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Preference number: 6 (lower is better) Translates to: VQGADDSCGQER*PDVQPGHLVQD Trigger: ATCCTGAACCAAGTGACCGGGTTGGACATCTGGGCATCGCTCCTGTCCACAGGAATCATCTGCACCTTGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS CAA 72 bp | AAGATCGGCAAGAAGAGCAAGGCTGTGAGCAGCGAATaGAGCAACTGGCCCACGCACATCCACAGAAACTTG | + |
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Preference number: 6 (lower is better) Translates to: KIGKKSKAVSSE*SNWPTHIHRNL Trigger: CAAGTTTCTGTGGATGTGCGTGGGCCAGTTGCTCAATTCGCTGCTCACAGCCTTGCTCTTCTTGCCGATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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| CDS GCA 72 bp | CTTGTAGTAGACAAACATGACAATTCCACAGCAAGCTaGACTAGCCACAATCAGGAAGAGGCCAAGCTGGTT | + |
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Preference number: 6 (lower is better) Translates to: LVVDKHDNSTAS*TSHNQEEAKLV Trigger: AACCAGCTTGGCCTCTTCCTGATTGTGGCTAGTGCAGCTTGCTGTGGAATTGTCATGTTTGTCTACTACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000809.3 |
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