Pregenerated sensors for SLC5A4B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020226Ensembl transcript IDs: ENSMUST00000120757.2
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AATTCTTATGCATTGGTAAAATGGAAGGACCCACTAACTAACAAATaGAAGGGTTCAGATCTGGTTATAATCTGGGGAAGGGACTCGGTC | + |
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Preference number: 1 (lower is better) Translates to: NSYALVKWKDPLTNK*KGSDLVIIWGRDSV Trigger: GACCGAGTCCCTTCCCCAGATTATAACCAGATCTGAACCCTTCCATTTGTTAGTTAGTGGGTCCTTCCATTTTACCAATGCATAAGAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCCCGAGAGATTAATTCGTCAGCTGAACACAAATCCTGAATCTTCTTGTAAGAAATCTGCCTGCCTCTaGCTCCCAAGTGCTGGGACT | + |
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Preference number: 2 (lower is better) Translates to: LPERLIRQLNTNPESSCKKSACL*LPSAGT Trigger: AGTCCCAGCACTTGGGAGGCAGAGGCAGGCAGATTT...CTTACAAGAAGATTCAGGATTTGTGTTCAGCTGACGAATTAATCTCTCGGGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| 3UTR CAA 90 bp | GCAGCGGATCGCCACTGGCATCCAGTTACCTCTAATTCTTATGCATaGGTAAAATGGAAGGACCCACTAACTAACAAATGGAAGGGTTCA | + |
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Preference number: 2 (lower is better) Translates to: AADRHWHPVTSNSYA*VKWKDPLTNKWKGS Trigger: TGAACCCTTCCATTTGTTAGTTAGTGGGTCCTTCCATTTTACCAATGCATAAGAATTAGAGGTAACTGGATGCCAGTGGCGATCCGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| 3UTR CAA 90 bp | TCACCAAAGGCACATCTTGCCTTTGCTTTATTTGTTCTAAATTTTTaGCAAACTGATATTGAAGGTCAGTCTGCAGCGGATCGCCACTGG | + |
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Preference number: 2 (lower is better) Translates to: SPKAHLAFALFVLNF*QTDIEGQSAADRHW Trigger: CCAGTGGCGATCCGCTGCAGACTGACCTTCAATATCAGTTTGCAAAAAATTTAGAACAAATAAAGCAAAGGCAAGATGTGCCTTTGGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCCCGAGAGATTAATTCGTCAGCTGAACACAAATCCTGAATCTTCTTGTAAGCTGAAATTTACTAGGTaGGCACATGTCAAATACTGT | + |
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Preference number: 2 (lower is better) Translates to: LPERLIRQLNTNPESSCKLKFTR*AHVKYC Trigger: ACAGTATTTGACATGTGCTCACCTAGTAAATTTCAG...CTTACAAGAAGATTCAGGATTTGTGTTCAGCTGACGAATTAATCTCTCGGGCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| 3UTR CCA 72 bp | GCATTGGTAAAATGGAAGGACCCACTAACTAACAAATaGAAGGGTTCAGATCTGGTTATAATCTGGGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: ALVKWKDPLTNK*KGSDLVIIWGR Trigger: CCTTCCCCAGATTATAACCAGATCTGAACCCTTCCATTTGTTAGTTAGTGGGTCCTTCCATTTTACCAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| 3UTR-3UTR CAA 90 bp | CTGCCCGAGAGATTAATTCGTCAGCTGAACACAAATCCTGAATCTTCTTGTAAGCCCGGTCATTTACCTTaGTTACACAGCCAACTTTAT | + |
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Preference number: 3 (lower is better) Translates to: LPERLIRQLNTNPESSCKPGHLP*LHSQLY Trigger: ATAAAGTTGGCTGTGTAACAAAGGTAAATGACCGGG...CTTACAAGAAGATTCAGGATTTGTGTTCAGCTGACGAATTAATCTCTCGGGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| 3UTR CCA 72 bp | CATCCAGTTACCTCTAATTCTTATGCATTGGTAAAATaGAAGGACCCACTAACTAACAAATGGAAGGGTTCA | + |
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Preference number: 3 (lower is better) Translates to: HPVTSNSYALVK*KDPLTNKWKGS Trigger: TGAACCCTTCCATTTGTTAGTTAGTGGGTCCTTCCATTTTACCAATGCATAAGAATTAGAGGTAACTGGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS-3UTR TCA 90 bp | CTGCCCGAGAGATTAATTCGTCAGCTGAACACAAATCCTGAATCTTCTTGTAAGCGCTGTACGATGACCTaGTCGGCACACCAGTACCAG | + |
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Preference number: 4 (lower is better) Translates to: LPERLIRQLNTNPESSCKRCTMT*SAHQYQ Trigger: CTGGTACTGGTGTGCCGATCAGGTCATCGTACAGCG...CTTACAAGAAGATTCAGGATTTGTGTTCAGCTGACGAATTAATCTCTCGGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS-3UTR TCA 90 bp | CTGCCCGAGAGATTAATTCGTCAGCTGAACACAAATCCTGAATCTTCTTGTAAGAGCAGCATGCCCTCTTaGGACAGCCACGGGATTGCT | + |
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Preference number: 4 (lower is better) Translates to: LPERLIRQLNTNPESSCKSSMPS*DSHGIA Trigger: AGCAATCCCGTGGCTGTCTCAAGAGGGCATGCTGCT...CTTACAAGAAGATTCAGGATTTGTGTTCAGCTGACGAATTAATCTCTCGGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS-3UTR CCA 90 bp | CTGCCCGAGAGATTAATTCGTCAGCTGAACACAAATCCTGAATCTTCTTGTAAGTCTTGGGACAGTTACTaGGAGCCACGCAGCTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: LPERLIRQLNTNPESSCKSWDSY*EPRSCL Trigger: CAGGCAGCTGCGTGGCTCCCAGTAACTGTCCCAAGA...CTTACAAGAAGATTCAGGATTTGTGTTCAGCTGACGAATTAATCTCTCGGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS-3UTR TCA 90 bp | CCCGAGAGATTAATTCGTCAGCTGAACACAAATCCTGAATCTTCTTGTAAGAATGGAGGCTCCTCAGTCTaGGGCGTGATGCTGGGACTT | + |
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Preference number: 4 (lower is better) Translates to: PERLIRQLNTNPESSCKNGGSSV*GVMLGL Trigger: AAGTCCCAGCATCACGCCTCAGACTGAGGAGCCTCC...ATTCTTACAAGAAGATTCAGGATTTGTGTTCAGCTGACGAATTAATCTCTCGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS-3UTR TCA 90 bp | CTGCCCGAGAGATTAATTCGTCAGCTGAACACAAATCCTGAATCTTCTTGTAAGCATAGGCGGTACAGGTaGACATCAGGAATCGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LPERLIRQLNTNPESSCKHRRYR*TSGIGS Trigger: GGAGCCGATTCCTGATGTTCACCTGTACCGCCTATG...CTTACAAGAAGATTCAGGATTTGTGTTCAGCTGACGAATTAATCTCTCGGGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS-3UTR GCA 90 bp | CTGCCCGAGAGATTAATTCGTCAGCTGAACACAAATCCTGAATCTTCTTGTAAGCTTCTGCCTCAGAGCTaGCTCCTCTTCTTTGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: LPERLIRQLNTNPESSCKLLPQS*LLFFGQ Trigger: CTGACCAAAGAAGAGGAGGCAGCTCTGAGGCAGAAG...CTTACAAGAAGATTCAGGATTTGTGTTCAGCTGACGAATTAATCTCTCGGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS-3UTR GCA 90 bp | CTGCCCGAGAGATTAATTCGTCAGCTGAACACAAATCCTGAATCTTCTTGTAAGGTGTCTGAGAACTTCTaGCTCAGAGCTGCCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: LPERLIRQLNTNPESSCKVSENF*LRAASS Trigger: AGAGGAGGCAGCTCTGAGGCAGAAGTTCTCAGACAC...CTTACAAGAAGATTCAGGATTTGTGTTCAGCTGACGAATTAATCTCTCGGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS-3UTR CCA 90 bp | CTGCCCGAGAGATTAATTCGTCAGCTGAACACAAATCCTGAATCTTCTTGTAAGCTTCCTGAGATACTCTaGCATGGTCAACACCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: LPERLIRQLNTNPESSCKLPEIL*HGQHPS Trigger: GCTGGGGTGTTGACCATGCCAGAGTATCTCAGGAAG...CTTACAAGAAGATTCAGGATTTGTGTTCAGCTGACGAATTAATCTCTCGGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS-3UTR TCA 90 bp | CTGCCCGAGAGATTAATTCGTCAGCTGAACACAAATCCTGAATCTTCTTGTAAGCTTCTCAGATGTGTCTaGGAACTTCTGCCTCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: LPERLIRQLNTNPESSCKLLRCV*ELLPQS Trigger: GCTCTGAGGCAGAAGTTCTCAGACACATCTGAGAAG...CTTACAAGAAGATTCAGGATTTGTGTTCAGCTGACGAATTAATCTCTCGGGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS-3UTR TCA 90 bp | CCCGAGAGATTAATTCGTCAGCTGAACACAAATCCTGAATCTTCTTGTAAGAATGCCAAGCCCACGAAGTaGTTGCTGCCAATGTTACTG | + |
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Preference number: 4 (lower is better) Translates to: PERLIRQLNTNPESSCKNAKPTK*LLPMLL Trigger: CAGTAACATTGGCAGCAATCACTTCGTGGGCTTGGC...ATTCTTACAAGAAGATTCAGGATTTGTGTTCAGCTGACGAATTAATCTCTCGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS-3UTR GCA 90 bp | CTGCCCGAGAGATTAATTCGTCAGCTGAACACAAATCCTGAATCTTCTTGTAAGAGCCCACGAAGTGATTaGTGCCAATGTTACTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: LPERLIRQLNTNPESSCKSPRSD*CQCYWQ Trigger: TTGCCAGTAACATTGGCAGCAATCACTTCGTGGGCT...CTTACAAGAAGATTCAGGATTTGTGTTCAGCTGACGAATTAATCTCTCGGGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS-3UTR CCA 90 bp | CTGCCCGAGAGATTAATTCGTCAGCTGAACACAAATCCTGAATCTTCTTGTAAGCCACTACAGAGGGGATaGCATTCATATACTTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: LPERLIRQLNTNPESSCKPLQRG*HSYTSR Trigger: CCGAGAAGTATATGAATGCCATCCCCTCTGTAGTGG...CTTACAAGAAGATTCAGGATTTGTGTTCAGCTGACGAATTAATCTCTCGGGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS-3UTR CCA 90 bp | CCCGAGAGATTAATTCGTCAGCTGAACACAAATCCTGAATCTTCTTGTAAGAATTATCAGTCCCGGCCATaGAATGTCTCCAGTGACTGG | + |
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Preference number: 4 (lower is better) Translates to: PERLIRQLNTNPESSCKNYQSRP*NVSSDW Trigger: CCAGTCACTGGAGACATTCCATGGCCGGGACTGATA...ATTCTTACAAGAAGATTCAGGATTTGTGTTCAGCTGACGAATTAATCTCTCGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS-3UTR CCA 90 bp | CCCGAGAGATTAATTCGTCAGCTGAACACAAATCCTGAATCTTCTTGTAAGAATCAGGCGGCCTTCACGTaGGACATGTTCTTACCACAT | + |
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Preference number: 4 (lower is better) Translates to: PERLIRQLNTNPESSCKNQAAFT*DMFLPH Trigger: ATGTGGTAAGAACATGTCCCACGTGAAGGCCGCCTG...ATTCTTACAAGAAGATTCAGGATTTGTGTTCAGCTGACGAATTAATCTCTCGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS-3UTR TCA 90 bp | CCCGAGAGATTAATTCGTCAGCTGAACACAAATCCTGAATCTTCTTGTAAGAATATGTCAGCAGCATTCTaGATGCGCACTGGCACTACA | + |
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Preference number: 4 (lower is better) Translates to: PERLIRQLNTNPESSCKNMSAAF*MRTGTT Trigger: TGTAGTGCCAGTGCGCATTCAGAATGCTGCTGACAT...ATTCTTACAAGAAGATTCAGGATTTGTGTTCAGCTGACGAATTAATCTCTCGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS-3UTR TCA 90 bp | CTGCCCGAGAGATTAATTCGTCAGCTGAACACAAATCCTGAATCTTCTTGTAAGTCCGGAAAATATGATTaGGGAAGTTTGAAGGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LPERLIRQLNTNPESSCKSGKYD*GSLKGH Trigger: GTGGCCCTTCAAACTTCCTCAATCATATTTTCCGGA...CTTACAAGAAGATTCAGGATTTGTGTTCAGCTGACGAATTAATCTCTCGGGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS-3UTR TCA 90 bp | CTGCCCGAGAGATTAATTCGTCAGCTGAACACAAATCCTGAATCTTCTTGTAAGAATCCCAAGGCCAATTaGATGAATATGGCTCCGGAA | + |
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Preference number: 4 (lower is better) Translates to: LPERLIRQLNTNPESSCKNPKAN*MNMAPE Trigger: TTCCGGAGCCATATTCATTCAATTGGCCTTGGGATT...CTTACAAGAAGATTCAGGATTTGTGTTCAGCTGACGAATTAATCTCTCGGGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS-3UTR TCA 90 bp | CTGCCCGAGAGATTAATTCGTCAGCTGAACACAAATCCTGAATCTTCTTGTAAGCAAATGCAAACCCCATaGGAATTAAGGAGCCAAGCA | + |
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Preference number: 4 (lower is better) Translates to: LPERLIRQLNTNPESSCKQMQTP*ELRSQA Trigger: TGCTTGGCTCCTTAATTCTCATGGGGTTTGCATTTG...CTTACAAGAAGATTCAGGATTTGTGTTCAGCTGACGAATTAATCTCTCGGGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS-3UTR TCA 90 bp | CCCGAGAGATTAATTCGTCAGCTGAACACAAATCCTGAATCTTCTTGTAAGAATATGGAATGTCTCCAGTaGCTGGATCTCGGAAGACGT | + |
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Preference number: 4 (lower is better) Translates to: PERLIRQLNTNPESSCKNMECLQ*LDLGRR Trigger: ACGTCTTCCGAGATCCAGTCACTGGAGACATTCCAT...ATTCTTACAAGAAGATTCAGGATTTGTGTTCAGCTGACGAATTAATCTCTCGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS-3UTR GCA 90 bp | CTGCCCGAGAGATTAATTCGTCAGCTGAACACAAATCCTGAATCTTCTTGTAAGCCACGAAGTGATTGCTaGCAATGTTACTGGCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: LPERLIRQLNTNPESSCKPRSDC*QCYWQR Trigger: TCTTTGCCAGTAACATTGGCAGCAATCACTTCGTGG...CTTACAAGAAGATTCAGGATTTGTGTTCAGCTGACGAATTAATCTCTCGGGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS-3UTR GCA 90 bp | CCCGAGAGATTAATTCGTCAGCTGAACACAAATCCTGAATCTTCTTGTAAGAATCCCCAGAATGCTCCCTaGTCATTGACCCTTTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: PERLIRQLNTNPESSCKNPQNAP*SLTLLK Trigger: CTTCAAAAGGGTCAATGAGCAGGGAGCATTCTGGGG...ATTCTTACAAGAAGATTCAGGATTTGTGTTCAGCTGACGAATTAATCTCTCGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS-3UTR GCA 90 bp | CTGCCCGAGAGATTAATTCGTCAGCTGAACACAAATCCTGAATCTTCTTGTAAGAGTTTCCAATTCTTCTaGATCCAAGTCTATCCGCTC | + |
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Preference number: 4 (lower is better) Translates to: LPERLIRQLNTNPESSCKSFQFF*IQVYPL Trigger: GAGCGGATAGACTTGGATGCAGAAGAATTGGAAACT...CTTACAAGAAGATTCAGGATTTGTGTTCAGCTGACGAATTAATCTCTCGGGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS-3UTR CCA 90 bp | CTGCCCGAGAGATTAATTCGTCAGCTGAACACAAATCCTGAATCTTCTTGTAAGCACACCAGTACCAGATaGCTAAAATGGTCATTCCAA | + |
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Preference number: 4 (lower is better) Translates to: LPERLIRQLNTNPESSCKHTSTR*LKWSFQ Trigger: TTGGAATGACCATTTTAGCCATCTGGTACTGGTGTG...CTTACAAGAAGATTCAGGATTTGTGTTCAGCTGACGAATTAATCTCTCGGGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS-3UTR CCA 90 bp | CCCGAGAGATTAATTCGTCAGCTGAACACAAATCCTGAATCTTCTTGTAAGAATCTTCTTTGGTCAGCTTaGGCCCTGTATTCTGCAAAC | + |
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Preference number: 4 (lower is better) Translates to: PERLIRQLNTNPESSCKNLLWSA*ALYSAN Trigger: GTTTGCAGAATACAGGGCCCAAGCTGACCAAAGAAG...ATTCTTACAAGAAGATTCAGGATTTGTGTTCAGCTGACGAATTAATCTCTCGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS-3UTR CCA 90 bp | CTGCCCGAGAGATTAATTCGTCAGCTGAACACAAATCCTGAATCTTCTTGTAAGACCAGATGGCTAAAATaGTCATTCCAAATATCAGTC | + |
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Preference number: 4 (lower is better) Translates to: LPERLIRQLNTNPESSCKTRWLK*SFQISV Trigger: GACTGATATTTGGAATGACCATTTTAGCCATCTGGT...CTTACAAGAAGATTCAGGATTTGTGTTCAGCTGACGAATTAATCTCTCGGGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS CCA 90 bp | GCATCAGGCCTCGCAGTCCATCAGGCATCAACTCCAGCACCAGGGTaGGGTAGGCATAGTTGGTGCAGCCGACCGCAGTGCCACACTGTT | + |
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Preference number: 5 (lower is better) Translates to: ASGLAVHQASTPAPG*GRHSWCSRPQCHTV Trigger: AACAGTGTGGCACTGCGGTCGGCTGCACCAACTATGCCTACCCCACCCTGGTGCTGGAGTTGATGCCTGATGGACTGCGAGGCCTGATGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS GCA 90 bp | CCAGCACCAGGGTGGGGTAGGCATAGTTGGTGCAGCCGACCGCAGTaGCACACTGTTTCTCACACTCAGAAGGTACAACGCAGGCCACCT | + |
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Preference number: 5 (lower is better) Translates to: PAPGWGRHSWCSRPQ*HTVSHTQKVQRRPP Trigger: AGGTGGCCTGCGTTGTACCTTCTGAGTGTGAGAAACAGTGTGGCACTGCGGTCGGCTGCACCAACTATGCCTACCCCACCCTGGTGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS GCA 90 bp | CTCAGAGCTGCCTCCTCTTCTTTGGTCAGCTTGGGCCCTGTATTCTaGAAACCACACAATAAGCAGCATGCCCTCTTGAGACAGCCACGG | + |
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Preference number: 5 (lower is better) Translates to: LRAASSSLVSLGPVF*KPHNKQHALLRQPR Trigger: CCGTGGCTGTCTCAAGAGGGCATGCTGCTTATTGTGTGGTTTGCAGAATACAGGGCCCAAGCTGACCAAAGAAGAGGAGGCAGCTCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS TCA 90 bp | CGCTCCTCTGTGTTGTTCCAAAGACTCCAGCATAGGCGGTACAGGTaGACATCAGGAATCGGCTCCGTTAGGAAGGAGACTCCCAGGATT | + |
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Preference number: 5 (lower is better) Translates to: RSSVLFQRLQHRRYR*TSGIGSVRKETPRI Trigger: AATCCTGGGAGTCTCCTTCCTAACGGAGCCGATTCCTGATGTTCACCTGTACCGCCTATGCTGGAGTCTTTGGAACAACACAGAGGAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS CCA 90 bp | GTAGATCTGCAGTCTCTTCCCACCGAAGCGCTTCCTGAGATACTCTaGCATGGTCAACACCCCAGCCTTGATGTAGATGGGGAGAAACAC | + |
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Preference number: 5 (lower is better) Translates to: VDLQSLPTEALPEIL*HGQHPSLDVDGEKH Trigger: GTGTTTCTCCCCATCTACATCAAGGCTGGGGTGTTGACCATGCCAGAGTATCTCAGGAAGCGCTTCGGTGGGAAGAGACTGCAGATCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS TCA 90 bp | CCTTCACGTGGGACATGTTCTTACCACATAAGCAGCGCTGTACGATaGCCTGATCGGCACACCAGTACCAGATGGCTAAAATGGTCATTC | + |
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Preference number: 5 (lower is better) Translates to: PSRGTCSYHISSAVR*PDRHTSTRWLKWSF Trigger: GAATGACCATTTTAGCCATCTGGTACTGGTGTGCCGATCAGGTCATCGTACAGCGCTGCTTATGTGGTAAGAACATGTCCCACGTGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS-3UTR CAA 90 bp | CTGCCCGAGAGATTAATTCGTCAGCTGAACACAAATCCTGAATCTTCTTGTAAGGGGCTGATGGTCAGGTaGTCCCCCTCCACTACAGAG | + |
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Preference number: 5 (lower is better) Translates to: LPERLIRQLNTNPESSCKGLMVR*SPSTTE Trigger: CTCTGTAGTGGAGGGGGACAACCTGACCATCAGCCC...CTTACAAGAAGATTCAGGATTTGTGTTCAGCTGACGAATTAATCTCTCGGGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS-3UTR CAA 90 bp | CTGCCCGAGAGATTAATTCGTCAGCTGAACACAAATCCTGAATCTTCTTGTAAGAAGCAGCATGCCCTCTaGAGACAGCCACGGGATTGC | + |
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Preference number: 5 (lower is better) Translates to: LPERLIRQLNTNPESSCKKQHAL*RQPRDC Trigger: GCAATCCCGTGGCTGTCTCAAGAGGGCATGCTGCTT...CTTACAAGAAGATTCAGGATTTGTGTTCAGCTGACGAATTAATCTCTCGGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS-3UTR CAA 90 bp | CTGCCCGAGAGATTAATTCGTCAGCTGAACACAAATCCTGAATCTTCTTGTAAGGCTGCCTCCTCTTCTTaGGTCAGCTTGGGCCCTGTA | + |
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Preference number: 5 (lower is better) Translates to: LPERLIRQLNTNPESSCKAASSS*VSLGPV Trigger: TACAGGGCCCAAGCTGACCAAAGAAGAGGAGGCAGC...CTTACAAGAAGATTCAGGATTTGTGTTCAGCTGACGAATTAATCTCTCGGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS TCA 90 bp | CAATCCCAAGGCCAATTGAATGAATATGGCTCCGGAAAATATGATTaGGGAAGTTTGAAGGGCCACCATGATGAAGAGGGAGAGGACAGA | + |
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Preference number: 5 (lower is better) Translates to: QSQGQLNEYGSGKYD*GSLKGHHDEEGEDR Trigger: TCTGTCCTCTCCCTCTTCATCATGGTGGCCCTTCAAACTTCCTCAATCATATTTTCCGGAGCCATATTCATTCAATTGGCCTTGGGATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS GCA 90 bp | TTCTTCAAGAGCACCACCAGCTTCTTCTTGAGTTTCCAATTCTTCTaGATCCAAGTCTATCCGCTCCTCTGTGTTGTTCCAAAGACTCCA | + |
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Preference number: 5 (lower is better) Translates to: FFKSTTSFFLSFQFF*IQVYPLLCVVPKTP Trigger: TGGAGTCTTTGGAACAACACAGAGGAGCGGATAGACTTGGATGCAGAAGAATTGGAAACTCAAGAAGAAGCTGGTGGTGCTCTTGAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS-3UTR CAA 90 bp | CTGCCCGAGAGATTAATTCGTCAGCTGAACACAAATCCTGAATCTTCTTGTAAGATCCGCTCCTCTGTGTaGTTCCAAAGACTCCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: LPERLIRQLNTNPESSCKIRSSV*FQRLQH Trigger: ATGCTGGAGTCTTTGGAACAACACAGAGGAGCGGAT...CTTACAAGAAGATTCAGGATTTGTGTTCAGCTGACGAATTAATCTCTCGGGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS-3UTR CAA 90 bp | CCCGAGAGATTAATTCGTCAGCTGAACACAAATCCTGAATCTTCTTGTAAGAATGCCTTCTTCCTTATCTaGGTGTACAGGTCGATGGTG | + |
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Preference number: 5 (lower is better) Translates to: PERLIRQLNTNPESSCKNAFFLI*VYRSMV Trigger: CACCATCGACCTGTACACCAAGATAAGGAAGAAGGC...ATTCTTACAAGAAGATTCAGGATTTGTGTTCAGCTGACGAATTAATCTCTCGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS-3UTR CAA 90 bp | CCCGAGAGATTAATTCGTCAGCTGAACACAAATCCTGAATCTTCTTGTAAGAATGAGACAGCCACGGGATaGCTCAGAATCTTCTTCAAG | + |
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Preference number: 5 (lower is better) Translates to: PERLIRQLNTNPESSCKNETATG*LRIFFK Trigger: CTTGAAGAAGATTCTGAGCAATCCCGTGGCTGTCTC...ATTCTTACAAGAAGATTCAGGATTTGTGTTCAGCTGACGAATTAATCTCTCGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS-3UTR CAA 90 bp | CTGCCCGAGAGATTAATTCGTCAGCTGAACACAAATCCTGAATCTTCTTGTAAGTGCTCATTGACCCTTTaGAAGAAGATAGCAAGCATG | + |
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Preference number: 5 (lower is better) Translates to: LPERLIRQLNTNPESSCKCSLTL*KKIASM Trigger: CATGCTTGCTATCTTCTTCAAAAGGGTCAATGAGCA...CTTACAAGAAGATTCAGGATTTGTGTTCAGCTGACGAATTAATCTCTCGGGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS-3UTR CAA 90 bp | CTGCCCGAGAGATTAATTCGTCAGCTGAACACAAATCCTGAATCTTCTTGTAAGAATGCTCCCTGCTCATaGACCCTTTTGAAGAAGATA | + |
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Preference number: 5 (lower is better) Translates to: LPERLIRQLNTNPESSCKNAPCS*TLLKKI Trigger: TATCTTCTTCAAAAGGGTCAATGAGCAGGGAGCATT...CTTACAAGAAGATTCAGGATTTGTGTTCAGCTGACGAATTAATCTCTCGGGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS CCA 72 bp | CTCGCAGTCCATCAGGCATCAACTCCAGCACCAGGGTaGGGTAGGCATAGTTGGTGCAGCCGACCGCAGTGC | + |
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Preference number: 6 (lower is better) Translates to: LAVHQASTPAPG*GRHSWCSRPQC Trigger: GCACTGCGGTCGGCTGCACCAACTATGCCTACCCCACCCTGGTGCTGGAGTTGATGCCTGATGGACTGCGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS TCA 72 bp | TCTGTGACACCTGGACCAGTGGGACCCACAGGATGCTaGCGGCGATTAGGACCATGCCAAATATCCGTCCGG | + |
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Preference number: 6 (lower is better) Translates to: SVTPGPVGPTGC*RRLGPCQISVR Trigger: CCGGACGGATATTTGGCATGGTCCTAATCGCCGTCAGCATCCTGTGGGTCCCACTGGTCCAGGTGTCACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS GCA 72 bp | GGGTGGGGTAGGCATAGTTGGTGCAGCCGACCGCAGTaGCACACTGTTTCTCACACTCAGAAGGTACAACGC | + |
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Preference number: 6 (lower is better) Translates to: GWGRHSWCSRPQ*HTVSHTQKVQR Trigger: GCGTTGTACCTTCTGAGTGTGAGAAACAGTGTGGCACTGCGGTCGGCTGCACCAACTATGCCTACCCCACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS CCA 72 bp | CAGTCTCTTCCCACCGAAGCGCTTCCTGAGATACTCTaGCATGGTCAACACCCCAGCCTTGATGTAGATGGG | + |
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Preference number: 6 (lower is better) Translates to: QSLPTEALPEIL*HGQHPSLDVDG Trigger: CCCATCTACATCAAGGCTGGGGTGTTGACCATGCCAGAGTATCTCAGGAAGCGCTTCGGTGGGAAGAGACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS CCA 72 bp | GATGACAGAGATGTCAGCAGCATTCTGAATGCGCACTaGCACTACAGGAGGCTCCTCAGTCTGAGGCGTGAT | + |
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Preference number: 6 (lower is better) Translates to: DDRDVSSILNAH*HYRRLLSLRRD Trigger: ATCACGCCTCAGACTGAGGAGCCTCCTGTAGTGCCAGTGCGCATTCAGAATGCTGCTGACATCTCTGTCATC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS CCA 72 bp | TCTGCCTCAGAGCTGCCTCCTCTTCTTTGGTCAGCTTaGGCCCTGTATTCTGCAAACCACACAATAAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SASELPPLLWSA*ALYSANHTISS Trigger: GCTGCTTATTGTGTGGTTTGCAGAATACAGGGCCCAAGCTGACCAAAGAAGAGGAGGCAGCTCTGAGGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS TCA 72 bp | GTGTTGTTCCAAAGACTCCAGCATAGGCGGTACAGGTaGACATCAGGAATCGGCTCCGTTAGGAAGGAGACT | + |
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Preference number: 6 (lower is better) Translates to: VLFQRLQHRRYR*TSGIGSVRKET Trigger: AGTCTCCTTCCTAACGGAGCCGATTCCTGATGTTCACCTGTACCGCCTATGCTGGAGTCTTTGGAACAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS GCA 72 bp | GCCTCCTCTTCTTTGGTCAGCTTGGGCCCTGTATTCTaGAAACCACACAATAAGCAGCATGCCCTCTTGAGA | + |
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Preference number: 6 (lower is better) Translates to: ASSSLVSLGPVF*KPHNKQHALLR Trigger: TCTCAAGAGGGCATGCTGCTTATTGTGTGGTTTGCAGAATACAGGGCCCAAGCTGACCAAAGAAGAGGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS CAA 72 bp | TTCTGCCTCAGAGCTGCCTCCTCTTCTTTGGTCAGCTaGGGCCCTGTATTCTGCAAACCACACAATAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: FCLRAASSSLVS*GPVFCKPHNKQ Trigger: CTGCTTATTGTGTGGTTTGCAGAATACAGGGCCCAAGCTGACCAAAGAAGAGGAGGCAGCTCTGAGGCAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS CAA 90 bp | TTGGGCCCTGTATTCTGCAAACCACACAATAAGCAGCATGCCCTCTaGAGACAGCCACGGGATTGCTCAGAATCTTCTTCAAGAGCACCA | + |
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Preference number: 6 (lower is better) Translates to: LGPVFCKPHNKQHAL*RQPRDCSESSSRAP Trigger: TGGTGCTCTTGAAGAAGATTCTGAGCAATCCCGTGGCTGTCTCAAGAGGGCATGCTGCTTATTGTGTGGTTTGCAGAATACAGGGCCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS TCA 72 bp | CGATTAGGACCATGCCAAATATCCGTCCGGCTATCATaGGCTCTCTCTCTGATGCCTTCTTCCTTATCTTGG | + |
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Preference number: 6 (lower is better) Translates to: RLGPCQISVRLS*ALSLMPSSLSW Trigger: CCAAGATAAGGAAGAAGGCATCAGAGAGAGAGCTCATGATAGCCGGACGGATATTTGGCATGGTCCTAATCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS CAA 90 bp | ACGGGATTGCTCAGAATCTTCTTCAAGAGCACCACCAGCTTCTTCTaGAGTTTCCAATTCTTCTGCATCCAAGTCTATCCGCTCCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: TGLLRIFFKSTTSFF*SFQFFCIQVYPLLC Trigger: ACAGAGGAGCGGATAGACTTGGATGCAGAAGAATTGGAAACTCAAGAAGAAGCTGGTGGTGCTCTTGAAGAAGATTCTGAGCAATCCCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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| CDS CAA 72 bp | GTATTCTGCAAACCACACAATAAGCAGCATGCCCTCTaGAGACAGCCACGGGATTGCTCAGAATCTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: VFCKPHNKQHAL*RQPRDCSESSS Trigger: TGAAGAAGATTCTGAGCAATCCCGTGGCTGTCTCAAGAGGGCATGCTGCTTATTGTGTGGTTTGCAGAATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120757.2 |
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