Pregenerated sensors for SLC5A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030781Ensembl transcript IDs: ENSMUST00000033045.11, ENSMUST00000118169.8, ENSMUST00000137038.3, ENSMUST00000142841.8, ENSMUST00000153418.2, ENSMUST00000205720.2, ENSMUST00000206703.2, ENSMUST00000206716.2, ENSMUST00000206909.2
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGAACCAAAGCAGGCACCGGCGGAGCAGGCCTGGAGCCGGGGACTaGACCTCTTCCATCTCCATTGCACATTCCTGGCCCCCGTTCTGC | + |
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Preference number: 1 (lower is better) Translates to: QNQSRHRRSRPGAGD*TSSISIAHSWPPFC Trigger: GCAGAACGGGGGCCAGGAATGTGCAATGGAGATGGAAGAGGTCCAGTCCCCGGCTCCAGGCCTGCTCCGCCGGTGCCTGCTTTGGTTCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205720.2 ENSMUST00000206703.2 |
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| 3UTR CCA 90 bp | CTTGCTCATCCCACAGAACCAAAGCAGGCACCGGCGGAGCAGGCCTaGAGCCGGGGACTGGACCTCTTCCATCTCCATTGCACATTCCTG | + |
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Preference number: 1 (lower is better) Translates to: LAHPTEPKQAPAEQA*SRGLDLFHLHCTFL Trigger: CAGGAATGTGCAATGGAGATGGAAGAGGTCCAGTCCCCGGCTCCAGGCCTGCTCCGCCGGTGCCTGCTTTGGTTCTGTGGGATGAGCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205720.2 ENSMUST00000206703.2 |
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| 3UTR CCA 90 bp | AAAGCCATCCGAGGAGCAGCACCACGAAGAGCGCCCTCAGCAAACTaGGCTGTCCCAACTTGTTCATATCCCCACGCCAGGAGCTTCTCC | + |
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Preference number: 1 (lower is better) Translates to: KAIRGAAPRRAPSAN*AVPTCSYPHARSFS Trigger: GGAGAAGCTCCTGGCGTGGGGATATGAACAAGTTGGGACAGCCCAGTTTGCTGAGGGCGCTCTTCGTGGTGCTGCTCCTCGGATGGCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153418.2 |
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| 3UTR CCA 90 bp | GCGGAGGTACTGAGGCATTGTGATCACACCAGCGGTCAGATACACTaGCACAAAAAGCCATCCGAGGAGCAGCACCACGAAGAGCGCCCT | + |
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Preference number: 1 (lower is better) Translates to: AEVLRHCDHTSGQIH*HKKPSEEQHHEERP Trigger: AGGGCGCTCTTCGTGGTGCTGCTCCTCGGATGGCTTTTTGTGCCAGTGTATCTGACCGCTGGTGTGATCACAATGCCTCAGTACCTCCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153418.2 |
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| 3UTR TCA 90 bp | GAATACGGTGCCCACCAAAGCGCTTGCGGAGGTACTGAGGCATTGTaGTCACACCAGCGGTCAGATACACTGGCACAAAAAGCCATCCGA | + |
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Preference number: 1 (lower is better) Translates to: EYGAHQSACGGTEAL*SHQRSDTLAQKAIR Trigger: TCGGATGGCTTTTTGTGCCAGTGTATCTGACCGCTGGTGTGATCACAATGCCTCAGTACCTCCGCAAGCGCTTTGGTGGGCACCGTATTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153418.2 |
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| 3UTR CCA 90 bp | CAATTGGCCATCATCTTGTGGGAAGTGACAACCAATCAAATGGACTaGACCCCGGGTAAAGAGGAAGGGAACCGGTTCCTTCCTGCTGTA | + |
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Preference number: 1 (lower is better) Translates to: QLAIILWEVTTNQMD*TPGKEEGNRFLPAV Trigger: TACAGCAGGAAGGAACCGGTTCCCTTCCTCTTTACCCGGGGTCCAGTCCATTTGATTGGTTGTCACTTCCCACAAGATGATGGCCAATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGCGGGGATCCTCACTGATGTCCTCCAGCCGCCTGGTGGTTGCCGCCACCTCCCGGCGGAGCAGGCCTaGAGCCGGGGACTGGACCTC | + |
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Preference number: 2 (lower is better) Translates to: PAGILTDVLQPPGGCRHLPAEQA*SRGLDL Trigger: GAGGTCCAGTCCCCGGCTCCAGGCCTGCTCCGCCGG...GAGGTGGCGGCAACCACCAGGCGGCTGGAGGACATCAGTGAGGATCCCCGCTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205720.2 ENSMUST00000206703.2 |
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| 3UTR-3UTR GCA 90 bp | CGCCTGGTGGTTGCCGCCACCTCCTCGGTAGTGGGCGGAGGACTCCCTGACCCATCCTGGCCCCCGTTCTaGACAGGAGCAGGGGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: RLVVAATSSVVGGGLPDPSWPPF*TGAGAG Trigger: TCCAGCCCCTGCTCCTGTGCAGAACGGGGGCCAGGA...TGGGTCAGGGAGTCCTCCGCCCACTACCGAGGAGGTGGCGGCAACCACCAGGCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205720.2 ENSMUST00000206703.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTCACTGATGTCCTCCAGCCGCCTGGTGGTTGCCGCCACCTCCTCGGTAGTGTCCTGGCCCCCGTTCTaGACAGGAGCAGGGGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: SSLMSSSRLVVAATSSVVSWPPF*TGAGAG Trigger: TCCAGCCCCTGCTCCTGTGCAGAACGGGGGCCAGGA...CACTACCGAGGAGGTGGCGGCAACCACCAGGCGGCTGGAGGACATCAGTGAGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205720.2 ENSMUST00000206703.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCGCCTGGTGGTTGCCGCCACCTCCTCGGTAGTGGGCGGAGGACTCCCTGACTCCATTGCACATTCCTaGCCCCCGTTCTGCACAGGA | + |
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Preference number: 2 (lower is better) Translates to: SRLVVAATSSVVGGGLPDSIAHS*PPFCTG Trigger: TCCTGTGCAGAACGGGGGCCAGGAATGTGCAATGGA...GTCAGGGAGTCCTCCGCCCACTACCGAGGAGGTGGCGGCAACCACCAGGCGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000205720.2 ENSMUST00000206703.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGCCACGGTCATCATGAGTAGGGCATTGAGGTTGACTACTCGTGCCCAGCGGCCTCCAGCCGCCTGGTaGTTGCCGCCACCTCCTCGG | + |
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Preference number: 2 (lower is better) Translates to: TATVIMSRALRLTTRAQRPPAAW*LPPPPR Trigger: CCGAGGAGGTGGCGGCAACCACCAGGCGGCTGGAGG...CCGCTGGGCACGAGTAGTCAACCTCAATGCCCTACTCATGATGACCGTGGCTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205720.2 ENSMUST00000206703.2 |
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| 3UTR-3UTR CCA 90 bp | AACACCCTCGACTTTATGCATAGAAGCCCCAGAGGAACACAGCCACGGTCATCACCGGCGGAGCAGGCCTaGAGCCGGGGACTGGACCTC | + |
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Preference number: 2 (lower is better) Translates to: NTLDFMHRSPRGTQPRSSPAEQA*SRGLDL Trigger: GAGGTCCAGTCCCCGGCTCCAGGCCTGCTCCGCCGG...TGATGACCGTGGCTGTGTTCCTCTGGGGCTTCTATGCATAAAGTCGAGGGTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205720.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGCCACGGTCATCATGAGTAGGGCATTGAGGTTGACTACTCGTGCCCAGCGGTGTCCTCCAGCCGCCTaGTGGTTGCCGCCACCTCCT | + |
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Preference number: 2 (lower is better) Translates to: TATVIMSRALRLTTRAQRCPPAA*WLPPPP Trigger: AGGAGGTGGCGGCAACCACCAGGCGGCTGGAGGACA...CCGCTGGGCACGAGTAGTCAACCTCAATGCCCTACTCATGATGACCGTGGCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205720.2 ENSMUST00000206703.2 |
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| 3UTR CAA 90 bp | CCCCAGAGGAACACAGCCACGGTCATCATGAGTAGGGCATTGAGGTaGACTACTCGTGCCCAGCGGGGATCCTCACTGATGTCCTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: PQRNTATVIMSRALR*TTRAQRGSSLMSSS Trigger: GCTGGAGGACATCAGTGAGGATCCCCGCTGGGCACGAGTAGTCAACCTCAATGCCCTACTCATGATGACCGTGGCTGTGTTCCTCTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205720.2 ENSMUST00000206703.2 |
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| 3UTR CAA 90 bp | AGCAGCACCACGAAGAGCGCCCTCAGCAAACTGGGCTGTCCCAACTaGTTCATATCCCCACGCCAGGAGCTTCTCCAAGTTGTGATCTTT | + |
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Preference number: 2 (lower is better) Translates to: SSTTKSALSKLGCPN*FISPRQELLQVVIF Trigger: AAAGATCACAACTTGGAGAAGCTCCTGGCGTGGGGATATGAACAAGTTGGGACAGCCCAGTTTGCTGAGGGCGCTCTTCGTGGTGCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153418.2 |
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| 3UTR-3UTR TCA 90 bp | GAGCACGGACAGGTAGAGGCGAATACGGTGCCCACCAAAGCGCTTGCGGAGGTAAGCTTCTCCAAGTTGTaGTCTTTCCAGGAGTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: EHGQVEANTVPTKALAEVSFSKL*SFQEFP Trigger: TGGAAACTCCTGGAAAGATCACAACTTGGAGAAGCT...TACCTCCGCAAGCGCTTTGGTGGGCACCGTATTCGCCTCTACCTGTCCGTGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153418.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTGGGAAGTGACAACCAATCAAATGGACTGGACCCCGGGTAAAGAGGAAGGGGCCCTGTTCCTTTTCTaGGATCCACTCCAAGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: LWEVTTNQMDWTPGKEEGALFLF*DPLQAA Trigger: AGCAGCTTGGAGTGGATCCCAGAAAAGGAACAGGGC...CCCTTCCTCTTTACCCGGGGTCCAGTCCATTTGATTGGTTGTCACTTCCCACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
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| 3UTR GCA 72 bp | GGGATCCTCACTGATGTCCTCCAGCCGCCTGGTGGTTaGCGCCACCTCCTCGGTAGTGGGCGGAGGACTCCC | + |
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Preference number: 3 (lower is better) Translates to: GILTDVLQPPGG*RHLLGSGRRTP Trigger: GGGAGTCCTCCGCCCACTACCGAGGAGGTGGCGGCAACCACCAGGCGGCTGGAGGACATCAGTGAGGATCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205720.2 ENSMUST00000206703.2 |
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| 3UTR CCA 72 bp | AGCAGGCACCGGCGGAGCAGGCCTGGAGCCGGGGACTaGACCTCTTCCATCTCCATTGCACATTCCTGGCCC | + |
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Preference number: 3 (lower is better) Translates to: SRHRRSRPGAGD*TSSISIAHSWP Trigger: GGGCCAGGAATGTGCAATGGAGATGGAAGAGGTCCAGTCCCCGGCTCCAGGCCTGCTCCGCCGGTGCCTGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205720.2 ENSMUST00000206703.2 |
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| 3UTR CCA 72 bp | CCCACAGAACCAAAGCAGGCACCGGCGGAGCAGGCCTaGAGCCGGGGACTGGACCTCTTCCATCTCCATTGC | + |
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Preference number: 3 (lower is better) Translates to: PTEPKQAPAEQA*SRGLDLFHLHC Trigger: GCAATGGAGATGGAAGAGGTCCAGTCCCCGGCTCCAGGCCTGCTCCGCCGGTGCCTGCTTTGGTTCTGTGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205720.2 ENSMUST00000206703.2 |
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| 3UTR GCA 72 bp | GCCTGGAGCCGGGGACTGGACCTCTTCCATCTCCATTaGACATTCCTGGCCCCCGTTCTGCACAGGAGCAGG | + |
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Preference number: 3 (lower is better) Translates to: AWSRGLDLFHLH*TFLAPVLHRSR Trigger: CCTGCTCCTGTGCAGAACGGGGGCCAGGAATGTGCAATGGAGATGGAAGAGGTCCAGTCCCCGGCTCCAGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205720.2 ENSMUST00000206703.2 |
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| 3UTR CCA 72 bp | CGAGACAATGGTAAGCCCCAGGAGCAGCGCAGGCCATaGCAGGTCTCCTGTCACAGGGTCACGCAGCAGGTG | + |
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Preference number: 3 (lower is better) Translates to: RDNGKPQEQRRP*QVSCHRVTQQV Trigger: CACCTGCTGCGTGACCCTGTGACAGGAGACCTGCCATGGCCTGCGCTGCTCCTGGGGCTTACCATTGTCTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137038.3 |
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| 3UTR CCA 72 bp | CGAGGAGCAGCACCACGAAGAGCGCCCTCAGCAAACTaGGCTGTCCCAACTTGTTCATATCCCCACGCCAGG | + |
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Preference number: 3 (lower is better) Translates to: RGAAPRRAPSAN*AVPTCSYPHAR Trigger: CCTGGCGTGGGGATATGAACAAGTTGGGACAGCCCAGTTTGCTGAGGGCGCTCTTCGTGGTGCTGCTCCTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153418.2 |
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| 3UTR-3UTR CAA 90 bp | ACGGTCATCATGAGTAGGGCATTGAGGTTGACTACTCGTGCCCAGCGGGGATCCCCTCTTCCATCTCCATaGCACATTCCTGGCCCCCGT | + |
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Preference number: 3 (lower is better) Translates to: TVIMSRALRLTTRAQRGSPLPSP*HIPGPR Trigger: ACGGGGGCCAGGAATGTGCAATGGAGATGGAAGAGG...GGATCCCCGCTGGGCACGAGTAGTCAACCTCAATGCCCTACTCATGATGACCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000205720.2 ENSMUST00000206703.2 |
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| 3UTR TCA 72 bp | CGAATACGGTGCCCACCAAAGCGCTTGCGGAGGTACTaGGGCATTGTGATCACACCAGCGGTCAGATACACT | + |
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Preference number: 3 (lower is better) Translates to: RIRCPPKRLRRY*GIVITPAVRYT Trigger: AGTGTATCTGACCGCTGGTGTGATCACAATGCCTCAGTACCTCCGCAAGCGCTTTGGTGGGCACCGTATTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153418.2 |
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| 3UTR-3UTR CAA 90 bp | CTCATGGCATCCAACACCCTCGACTTTATGCATAGAAGCCCCAGAGGAACACAGAGTAGGGCATTGAGGTaGACTACTCGTGCCCAGCGG | + |
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Preference number: 3 (lower is better) Translates to: LMASNTLDFMHRSPRGTQSRALR*TTRAQR Trigger: CCGCTGGGCACGAGTAGTCAACCTCAATGCCCTACT...CTGTGTTCCTCTGGGGCTTCTATGCATAAAGTCGAGGGTGTTGGATGCCATGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205720.2 |
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| 3UTR TCA 72 bp | GCCCACCAAAGCGCTTGCGGAGGTACTGAGGCATTGTaGTCACACCAGCGGTCAGATACACTGGCACAAAAA | + |
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Preference number: 3 (lower is better) Translates to: AHQSACGGTEAL*SHQRSDTLAQK Trigger: TTTTTGTGCCAGTGTATCTGACCGCTGGTGTGATCACAATGCCTCAGTACCTCCGCAAGCGCTTTGGTGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153418.2 |
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| 3UTR CCA 72 bp | CTGAGGCATTGTGATCACACCAGCGGTCAGATACACTaGCACAAAAAGCCATCCGAGGAGCAGCACCACGAA | + |
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Preference number: 3 (lower is better) Translates to: LRHCDHTSGQIH*HKKPSEEQHHE Trigger: TTCGTGGTGCTGCTCCTCGGATGGCTTTTTGTGCCAGTGTATCTGACCGCTGGTGTGATCACAATGCCTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153418.2 |
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| 3UTR TCA 72 bp | AGATTCTTTCCAGCCAGGCACCGCTGCACTATTACCTaGTCGCTGCACCAATACCAGCCCGAGACAATGGTA | + |
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Preference number: 3 (lower is better) Translates to: RFFPARHRCTIT*SLHQYQPETMV Trigger: TACCATTGTCTCGGGCTGGTATTGGTGCAGCGATCAGGTAATAGTGCAGCGGTGCCTGGCTGGAAAGAATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137038.3 |
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| 3UTR GCA 72 bp | TCTTGCCCTGTTCCTTTTCTGGGATCCACTCCAAGCTaGTCACCCTTACTCTTTGTGAGGGTCCAACATGGC | + |
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Preference number: 3 (lower is better) Translates to: SCPVPFLGSTPS*SPLLFVRVQHG Trigger: GCCATGTTGGACCCTCACAAAGAGTAAGGGTGAGCAGCTTGGAGTGGATCCCAGAAAAGGAACAGGGCAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
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| 3UTR GCA 72 bp | AAGAGGAAGGGAACCGGTTCCTTCCTGCTGTATTCTTaGCCTGTTCCTTTTCTGGGATCCACTCCAAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: KRKGTGSFLLYS*PVPFLGSTPSC Trigger: GCAGCTTGGAGTGGATCCCAGAAAAGGAACAGGGCAAGAATACAGCAGGAAGGAACCGGTTCCCTTCCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
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| 3UTR GCA 72 bp | GGTTGTAGCTCATGGCATCCAACACCCTCGACTTTATaGATAGAAGCCCCAGAGGAACACAGCCACGGTCAT | + |
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Preference number: 3 (lower is better) Translates to: GCSSWHPTPSTL*IEAPEEHSHGH Trigger: ATGACCGTGGCTGTGTTCCTCTGGGGCTTCTATGCATAAAGTCGAGGGTGTTGGATGCCATGAGCTACAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205720.2 |
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| 3UTR CCA 72 bp | GTTCCTTCCTGCTGTATTCTTGCCCTGTTCCTTTTCTaGGATCCACTCCAAGCTGCTCACCCTTACTCTTTG | + |
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Preference number: 3 (lower is better) Translates to: VPSCCILALFLF*DPLQAAHPYSL Trigger: CAAAGAGTAAGGGTGAGCAGCTTGGAGTGGATCCCAGAAAAGGAACAGGGCAAGAATACAGCAGGAAGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
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| 3UTR CCA 72 bp | ATCATCTTGTGGGAAGTGACAACCAATCAAATGGACTaGACCCCGGGTAAAGAGGAAGGGAACCGGTTCCTT | + |
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Preference number: 3 (lower is better) Translates to: IILWEVTTNQMD*TPGKEEGNRFL Trigger: AAGGAACCGGTTCCCTTCCTCTTTACCCGGGGTCCAGTCCATTTGATTGGTTGTCACTTCCCACAAGATGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
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| 3UTR TCA 72 bp | ACCTCTATGACCAATTGGCCATCATCTTGTGGGAAGTaGCAACCAATCAAATGGACTGGACCCCGGGTAAAG | + |
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Preference number: 3 (lower is better) Translates to: TSMTNWPSSCGK*QPIKWTGPRVK Trigger: CTTTACCCGGGGTCCAGTCCATTTGATTGGTTGTCACTTCCCACAAGATGATGGCCAATTGGTCATAGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
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| CDS-3UTR CCA 90 bp | ACTGATGTCCTCCAGCCGCCTGGTGGTTGCCGCCACCTCCTCGGTAGTGGGCGGAGCTGCCTGCACCACTaGCAGCCAAGCCACGGACAC | + |
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Preference number: 4 (lower is better) Translates to: TDVLQPPGGCRHLLGSGRSCLHH*QPSHGH Trigger: GTGTCCGTGGCTTGGCTGCCAGTGGTGCAGGCAGCT...CCGCCCACTACCGAGGAGGTGGCGGCAACCACCAGGCGGCTGGAGGACATCAGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206703.2 |
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| CDS-3UTR TCA 90 bp | AAGCAGGCACCGGCGGAGCAGGCCTGGAGCCGGGGACTGGACCTCTTCCATCTCCGGACACCGCCACGATaGATACCACCCAGAGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: KQAPAEQAWSRGLDLFHLRTPPR*IPPRAF Trigger: GAAGGCTCTGGGTGGTATTCATCGTGGCGGTGTCCG...GAGATGGAAGAGGTCCAGTCCCCGGCTCCAGGCCTGCTCCGCCGGTGCCTGCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206703.2 |
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| CDS-3UTR GCA 90 bp | AGCCGCCTGGTGGTTGCCGCCACCTCCTCGGTAGTGGGCGGAGGACTCCCTGACGAGGGATGGGCGCAGTaGACAGGGAGATTCCAAGTG | + |
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Preference number: 4 (lower is better) Translates to: SRLVVAATSSVVGGGLPDEGWAQ*TGRFQV Trigger: CACTTGGAATCTCCCTGTGCACTGCGCCCATCCCTC...GTCAGGGAGTCCTCCGCCCACTACCGAGGAGGTGGCGGCAACCACCAGGCGGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205720.2 ENSMUST00000206703.2 |
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| CDS-3UTR GCA 90 bp | AGCCGCCTGGTGGTTGCCGCCACCTCCTCGGTAGTGGGCGGAGGACTCCCTGACCGCTCCTCCTTGCTGTaGCGGAGACTGAAAACCAGG | + |
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Preference number: 4 (lower is better) Translates to: SRLVVAATSSVVGGGLPDRSSLL*RRLKTR Trigger: CCTGGTTTTCAGTCTCCGGCACAGCAAGGAGGAGCG...GTCAGGGAGTCCTCCGCCCACTACCGAGGAGGTGGCGGCAACCACCAGGCGGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205720.2 ENSMUST00000206703.2 |
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| 3UTR CAA 72 bp | GGCCTGGAGCCGGGGACTGGACCTCTTCCATCTCCATaGCACATTCCTGGCCCCCGTTCTGCACAGGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: GLEPGTGPLPSP*HIPGPRSAQEQ Trigger: CTGCTCCTGTGCAGAACGGGGGCCAGGAATGTGCAATGGAGATGGAAGAGGTCCAGTCCCCGGCTCCAGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000205720.2 ENSMUST00000206703.2 |
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| CDS-3UTR GCA 90 bp | GGGATCCTCACTGATGTCCTCCAGCCGCCTGGTGGTTGCCGCCACCTCCTCGGTCACCATGCTCCGTCCTaGCAGGAAGTAGCCACCAAC | + |
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Preference number: 4 (lower is better) Translates to: GILTDVLQPPGGCRHLLGHHAPS*QEVATN Trigger: GTTGGTGGCTACTTCCTGGCAGGACGGAGCATGGTG...ACCGAGGAGGTGGCGGCAACCACCAGGCGGCTGGAGGACATCAGTGAGGATCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205720.2 |
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| CDS-3UTR GCA 90 bp | CCAGGAGCAGCGCAGGCCATGGCAGGTCTCCTGTCACAGGGTCACGCAGCAGGTGTCTGTGTACATCAGTaGCGCCAGCCCTCCTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: PGAAQAMAGLLSQGHAAGVCVHQ*RQPSCH Trigger: GTGACAGGAGGGCTGGCGGCACTGATGTACACAGAC...ACCTGCTGCGTGACCCTGTGACAGGAGACCTGCCATGGCCTGCGCTGCTCCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137038.3 |
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| CDS-3UTR CCA 90 bp | ACCAAAGCAGGCACCGGCGGAGCAGGCCTGGAGCCGGGGACTGGACCTCTTCCACTTCACCACGAGCCGTaGGTAGGCGATGTTAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: TKAGTGGAGLEPGTGPLPLHHEP*VGDVRA Trigger: TGCTCTAACATCGCCTACCCACGGCTCGTGGTGAAG...TGGAAGAGGTCCAGTCCCCGGCTCCAGGCCTGCTCCGCCGGTGCCTGCTTTGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205720.2 |
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| CDS-3UTR CCA 90 bp | GGGATCCTCACTGATGTCCTCCAGCCGCCTGGTGGTTGCCGCCACCTCCTCGGTGATGCTTCTGAGGGATaGGCGCAGTGCACAGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: GILTDVLQPPGGCRHLLGDASEG*AQCTGR Trigger: TCTCCCTGTGCACTGCGCCCATCCCTCAGAAGCATC...ACCGAGGAGGTGGCGGCAACCACCAGGCGGCTGGAGGACATCAGTGAGGATCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205720.2 ENSMUST00000206703.2 |
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| CDS-3UTR TCA 90 bp | CCATCCGAGGAGCAGCACCACGAAGAGCGCCCTCAGCAAACTGGGCTGTCCCAAGCCAGGCCCACAAAATaGCCGCTGCCGATGTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: PSEEQHHEERPQQTGLSQARPTK*PLPMLL Trigger: CAGCAACATCGGCAGCGGTCATTTTGTGGGCCTGGC...TTGGGACAGCCCAGTTTGCTGAGGGCGCTCTTCGTGGTGCTGCTCCTCGGATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153418.2 |
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| CDS-3UTR TCA 90 bp | ACTGATGTCCTCCAGCCGCCTGGTGGTTGCCGCCACCTCCTCGGTAGTGGGCGGCTTGGACACCGTCAGTaGAGTCATTGCTCCCAGGTA | + |
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Preference number: 4 (lower is better) Translates to: TDVLQPPGGCRHLLGSGRLGHRQ*SHCSQV Trigger: TACCTGGGAGCAATGACTTCACTGACGGTGTCCAAG...CCGCCCACTACCGAGGAGGTGGCGGCAACCACCAGGCGGCTGGAGGACATCAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205720.2 |
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| CDS-3UTR TCA 90 bp | GAACCAAAGCAGGCACCGGCGGAGCAGGCCTGGAGCCGGGGACTGGACCTCTTCCGCTGCACTATTACCTaGTCGCTGCACCAATACCAG | + |
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Preference number: 4 (lower is better) Translates to: EPKQAPAEQAWSRGLDLFRCTIT*SLHQYQ Trigger: CTGGTATTGGTGCAGCGATCAGGTAATAGTGCAGCG...GAAGAGGTCCAGTCCCCGGCTCCAGGCCTGCTCCGCCGGTGCCTGCTTTGGTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205720.2 |
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| CDS-3UTR TCA 90 bp | CGCCTGGTGGTTGCCGCCACCTCCTCGGTAGTGGGCGGAGGACTCCCTGACCCACACCCAGCTTTGATGTaGGTCAGATTCTTTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLVVAATSSVVGGGLPDPHPALM*VRFFPA Trigger: GGCTGGAAAGAATCTGACTCACATCAAAGCTGGGTG...TGGGTCAGGGAGTCCTCCGCCCACTACCGAGGAGGTGGCGGCAACCACCAGGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205720.2 |
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| CDS-3UTR TCA 90 bp | AGCCGCCTGGTGGTTGCCGCCACCTCCTCGGTAGTGGGCGGAGGACTCCCTGACACAAGCCAACACCAATaGCCAGCAGGAAATAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRLVVAATSSVVGGGLPDTSQHQ*PAGNRQ Trigger: CTGCCTATTTCCTGCTGGTCATTGGTGTTGGCTTGT...GTCAGGGAGTCCTCCGCCCACTACCGAGGAGGTGGCGGCAACCACCAGGCGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205720.2 |
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| CDS-3UTR GCA 90 bp | CCATCCGAGGAGCAGCACCACGAAGAGCGCCCTCAGCAAACTGGGCTGTCCCAATGCTGCGCCAGTCCCTaGCAGGCCCACAAAATGACC | + |
|
Preference number: 4 (lower is better) Translates to: PSEEQHHEERPQQTGLSQCCASP*QAHKMT Trigger: GGTCATTTTGTGGGCCTGGCAGGGACTGGCGCAGCA...TTGGGACAGCCCAGTTTGCTGAGGGCGCTCTTCGTGGTGCTGCTCCTCGGATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153418.2 |
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| CDS-3UTR GCA 90 bp | TCTTGCTCATCCCACAGAACCAAAGCAGGCACCGGCGGAGCAGGCCTGGAGCCGGAGGGATGGGCGCAGTaGACAGGGAGATTCCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SCSSHRTKAGTGGAGLEPEGWAQ*TGRFQV Trigger: CACTTGGAATCTCCCTGTGCACTGCGCCCATCCCTC...CGGCTCCAGGCCTGCTCCGCCGGTGCCTGCTTTGGTTCTGTGGGATGAGCAAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205720.2 ENSMUST00000206703.2 |
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| CDS-3UTR CCA 90 bp | CCTGCTGTATTCTTGCCCTGTTCCTTTTCTGGGATCCACTCCAAGCTGCTCACCCCGGCGGAGCAGGCCTaGAGCCGGGGACTGGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: PAVFLPCSFSGIHSKLLTPAEQA*SRGLDL Trigger: GAGGTCCAGTCCCCGGCTCCAGGCCTGCTCCGCCGG...GGTGAGCAGCTTGGAGTGGATCCCAGAAAAGGAACAGGGCAAGAATACAGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
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| CDS-3UTR TCA 90 bp | CACCAATACCAGCCCGAGACAATGGTAAGCCCCAGGAGCAGCGCAGGCCATGGCCAGCCCAGGGCCTGTTaGATGAATACTGCCCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HQYQPETMVSPRSSAGHGQPRAC*MNTAPE Trigger: CTCTGGGGCAGTATTCATTCAACAGGCCCTGGGCTG...GCCATGGCCTGCGCTGCTCCTGGGGCTTACCATTGTCTCGGGCTGGTATTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137038.3 |
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| CDS-3UTR GCA 90 bp | AAGCAGGCACCGGCGGAGCAGGCCTGGAGCCGGGGACTGGACCTCTTCCATCTCTCAATCAGGACCTTCTaGTCCCCAAGTTCAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KQAPAEQAWSRGLDLFHLSIRTF*SPSSEP Trigger: AGGCTCTGAACTTGGGGAGCAGAAGGTCCTGATTGA...GAGATGGAAGAGGTCCAGTCCCCGGCTCCAGGCCTGCTCCGCCGGTGCCTGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205720.2 |
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| CDS-3UTR GCA 90 bp | TCTTGCTCATCCCACAGAACCAAAGCAGGCACCGGCGGAGCAGGCCTGGAGCCGCGCAGACACTGGAGGTaGCAGATAGCTGGAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SCSSHRTKAGTGGAGLEPRRHWR*QIAGDR Trigger: TCTGTCTCCAGCTATCTGGCACCTCCAGTGTCTGCG...CGGCTCCAGGCCTGCTCCGCCGGTGCCTGCTTTGGTTCTGTGGGATGAGCAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206703.2 |
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| CDS-3UTR GCA 90 bp | GCACCAATACCAGCCCGAGACAATGGTAAGCCCCAGGAGCAGCGCAGGCCATGGTCGGCTGGTAGCAGGTaGTGGAGATGTTGCCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: APIPARDNGKPQEQRRPWSAGSR*WRCCQQ Trigger: CTGTTGGCAACATCTCCAGCACCTGCTACCAGCCGA...CCATGGCCTGCGCTGCTCCTGGGGCTTACCATTGTCTCGGGCTGGTATTGGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137038.3 |
||
| CDS-3UTR GCA 90 bp | TCCTCACTGATGTCCTCCAGCCGCCTGGTGGTTGCCGCCACCTCCTCGGTAGTGACGGGGCACAAAGAGTaGAAGCACAAAGACCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSLMSSSRLVVAATSSVVTGHKE*KHKDRR Trigger: TCTGCGGTCTTTGTGCTTGCACTCTTTGTGCCCCGT...CACTACCGAGGAGGTGGCGGCAACCACCAGGCGGCTGGAGGACATCAGTGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206703.2 |
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| CDS-3UTR TCA 90 bp | ACTGATGTCCTCCAGCCGCCTGGTGGTTGCCGCCACCTCCTCGGTAGTGGGCGGAGATGCACCCAGCTTTaGTGTGAGTCAGATTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TDVLQPPGGCRHLLGSGRRCTQL*CESDSF Trigger: GAAAGAATCTGACTCACATCAAAGCTGGGTGCATCT...CCGCCCACTACCGAGGAGGTGGCGGCAACCACCAGGCGGCTGGAGGACATCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205720.2 |
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| CDS-3UTR GCA 90 bp | TCTTGCTCATCCCACAGAACCAAAGCAGGCACCGGCGGAGCAGGCCTGGAGCCGCTATTACCTGATCGCTaGACCAATACCAGCCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SCSSHRTKAGTGGAGLEPLLPDR*TNTSPR Trigger: TCTCGGGCTGGTATTGGTGCAGCGATCAGGTAATAG...CGGCTCCAGGCCTGCTCCGCCGGTGCCTGCTTTGGTTCTGTGGGATGAGCAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205720.2 |
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| CDS-3UTR CCA 90 bp | GCTGCACCAATACCAGCCCGAGACAATGGTAAGCCCCAGGAGCAGCGCAGGCCAGCTGGTAGCAGGTGCTaGAGATGTTGCCAACAGATG | + |
|
Preference number: 4 (lower is better) Translates to: AAPIPARDNGKPQEQRRPAGSRC*RCCQQM Trigger: CATCTGTTGGCAACATCTCCAGCACCTGCTACCAGC...TGGCCTGCGCTGCTCCTGGGGCTTACCATTGTCTCGGGCTGGTATTGGTGCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137038.3 |
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| CDS-3UTR CCA 90 bp | GTATTCTTGCCCTGTTCCTTTTCTGGGATCCACTCCAAGCTGCTCACCCTTACTCCTCCAGCCGCCTGGTaGTTGCCGCCACCTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VFLPCSFSGIHSKLLTLTPPAAW*LPPPPR Trigger: CCGAGGAGGTGGCGGCAACCACCAGGCGGCTGGAGG...AGTAAGGGTGAGCAGCTTGGAGTGGATCCCAGAAAAGGAACAGGGCAAGAATAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
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| CDS-3UTR TCA 90 bp | GCATCCAACACCCTCGACTTTATGCATAGAAGCCCCAGAGGAACACAGCCACGGGCCAGGCCCACAAAATaGCCGCTGCCGATGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASNTLDFMHRSPRGTQPRARPTK*PLPMLL Trigger: CAGCAACATCGGCAGCGGTCATTTTGTGGGCCTGGC...CCGTGGCTGTGTTCCTCTGGGGCTTCTATGCATAAAGTCGAGGGTGTTGGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205720.2 |
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| CDS-3UTR GCA 90 bp | AGATACACTGGCACAAAAAGCCATCCGAGGAGCAGCACCACGAAGAGCGCCCTCCACCATGCTCCGTCCTaGCAGGAAGTAGCCACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RYTGTKSHPRSSTTKSALHHAPS*QEVATN Trigger: GTTGGTGGCTACTTCCTGGCAGGACGGAGCATGGTG...GAGGGCGCTCTTCGTGGTGCTGCTCCTCGGATGGCTTTTTGTGCCAGTGTATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153418.2 |
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| CDS-3UTR GCA 90 bp | ATCATGAGTAGGGCATTGAGGTTGACTACTCGTGCCCAGCGGGGATCCTCACTGTGCTGCGCCAGTCCCTaGCAGGCCCACAAAATGACC | + |
|
Preference number: 4 (lower is better) Translates to: IMSRALRLTTRAQRGSSLCCASP*QAHKMT Trigger: GGTCATTTTGTGGGCCTGGCAGGGACTGGCGCAGCA...CAGTGAGGATCCCCGCTGGGCACGAGTAGTCAACCTCAATGCCCTACTCATGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205720.2 |
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| CDS-3UTR GCA 90 bp | AAGGGAACCGGTTCCTTCCTGCTGTATTCTTGCCCTGTTCCTTTTCTGGGATCCCACCGCCAAGCCACTTaGTGCGCCAGTCCCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KGTGSFLLYSCPVPFLGSHRQAT*CASPCQ Trigger: CTGGCAGGGACTGGCGCAGCAAGTGGCTTGGCGGTG...GGATCCCAGAAAAGGAACAGGGCAAGAATACAGCAGGAAGGAACCGGTTCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
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| CDS-3UTR GCA 90 bp | ATGGCATCCAACACCCTCGACTTTATGCATAGAAGCCCCAGAGGAACACAGCCACACCGCCAAGCCACTTaGTGCGCCAGTCCCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: MASNTLDFMHRSPRGTQPHRQAT*CASPCQ Trigger: CTGGCAGGGACTGGCGCAGCAAGTGGCTTGGCGGTG...TGGCTGTGTTCCTCTGGGGCTTCTATGCATAAAGTCGAGGGTGTTGGATGCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205720.2 |
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| CDS-3UTR GCA 90 bp | ACAGCCACGGTCATCATGAGTAGGGCATTGAGGTTGACTACTCGTGCCCAGCGGGCCCACCAAAGCGCTTaGGGAGGTACTGAGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: TATVIMSRALRLTTRAQRAHQSA*GGTEAL Trigger: CAATGCCTCAGTACCTCCGCAAGCGCTTTGGTGGGC...CCGCTGGGCACGAGTAGTCAACCTCAATGCCCTACTCATGATGACCGTGGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205720.2 |
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| CDS-3UTR GCA 90 bp | AAGCAGGCACCGGCGGAGCAGGCCTGGAGCCGGGGACTGGACCTCTTCCATCTCCTGTTGAATGAATACTaGCCCAGAGAACATATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KQAPAEQAWSRGLDLFHLLLNEY*PREHIH Trigger: GTGGATATGTTCTCTGGGGCAGTATTCATTCAACAG...GAGATGGAAGAGGTCCAGTCCCCGGCTCCAGGCCTGCTCCGCCGGTGCCTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205720.2 |
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| CDS-3UTR GCA 90 bp | GGACCTCTTCCATCTCCATTGCACATTCCTGGCCCCCGTTCTGCACAGGAGCAGTCGGCTGGTAGCAGGTaGTGGAGATGTTGCCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: GPLPSPLHIPGPRSAQEQSAGSR*WRCCQQ Trigger: CTGTTGGCAACATCTCCAGCACCTGCTACCAGCCGA...CTGCTCCTGTGCAGAACGGGGGCCAGGAATGTGCAATGGAGATGGAAGAGGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205720.2 |
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| CDS-3UTR CCA 90 bp | ACAGCCACGGTCATCATGAGTAGGGCATTGAGGTTGACTACTCGTGCCCAGCGGGATGCTTCTGAGGGATaGGCGCAGTGCACAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TATVIMSRALRLTTRAQRDASEG*AQCTGR Trigger: TCTCCCTGTGCACTGCGCCCATCCCTCAGAAGCATC...CCGCTGGGCACGAGTAGTCAACCTCAATGCCCTACTCATGATGACCGTGGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205720.2 ENSMUST00000206703.2 |
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| CDS-3UTR TCA 90 bp | CCAATTGGCCATCATCTTGTGGGAAGTGACAACCAATCAAATGGACTGGACCCCAGCGGGGATCCTCACTaGTGTCCTCCAGCCGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PIGHHLVGSDNQSNGLDPSGDPH*CPPAAW Trigger: CCAGGCGGCTGGAGGACATCAGTGAGGATCCCCGCT...GGGGTCCAGTCCATTTGATTGGTTGTCACTTCCCACAAGATGATGGCCAATTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
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| CDS-3UTR GCA 90 bp | TTCATATCCCCACGCCAGGAGCTTCTCCAAGTTGTGATCTTTCCAGGAGTTTCCCACCGCCAAGCCACTTaGTGCGCCAGTCCCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FISPRQELLQVVIFPGVSHRQAT*CASPCQ Trigger: CTGGCAGGGACTGGCGCAGCAAGTGGCTTGGCGGTG...GGAAACTCCTGGAAAGATCACAACTTGGAGAAGCTCCTGGCGTGGGGATATGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153418.2 |
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| CDS-3UTR GCA 90 bp | CAGGAGCAGCGCAGGCCATGGCAGGTCTCCTGTCACAGGGTCACGCAGCAGGTGCTGTTGAATGAATACTaGCCCAGAGAACATATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QEQRRPWQVSCHRVTQQVLLNEY*PREHIH Trigger: GTGGATATGTTCTCTGGGGCAGTATTCATTCAACAG...CACCTGCTGCGTGACCCTGTGACAGGAGACCTGCCATGGCCTGCGCTGCTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137038.3 |
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| CDS-3UTR GCA 90 bp | ACCGGTTCCTTCCTGCTGTATTCTTGCCCTGTTCCTTTTCTGGGATCCACTCCAGGCAGCCAGCATGACTaGCAGCATGAGTCCGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGSFLLYSCPVPFLGSTPGSQHD*QHESAQ Trigger: CTGCGCGGACTCATGCTGGCAGTCATGCTGGCTGCC...TGGAGTGGATCCCAGAAAAGGAACAGGGCAAGAATACAGCAGGAAGGAACCGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
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| CDS-3UTR CCA 90 bp | AGGAAGGGAACCGGTTCCTTCCTGCTGTATTCTTGCCCTGTTCCTTTTCTGGGAAGCTGCCTGCACCACTaGCAGCCAAGCCACGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: RKGTGSFLLYSCPVPFLGSCLHH*QPSHGH Trigger: GTGTCCGTGGCTTGGCTGCCAGTGGTGCAGGCAGCT...TCCCAGAAAAGGAACAGGGCAAGAATACAGCAGGAAGGAACCGGTTCCCTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
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| 3UTR CAA 72 bp | CAGAGGAACACAGCCACGGTCATCATGAGTAGGGCATaGAGGTTGACTACTCGTGCCCAGCGGGGATCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QRNTATVIMSRA*RLTTRAQRGSS Trigger: TGAGGATCCCCGCTGGGCACGAGTAGTCAACCTCAATGCCCTACTCATGATGACCGTGGCTGTGTTCCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205720.2 ENSMUST00000206703.2 |
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| CDS-3UTR TCA 90 bp | AGGAAGGGAACCGGTTCCTTCCTGCTGTATTCTTGCCCTGTTCCTTTTCTGGGAGCCAGGCCCACAAAATaGCCGCTGCCGATGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RKGTGSFLLYSCPVPFLGARPTK*PLPMLL Trigger: CAGCAACATCGGCAGCGGTCATTTTGTGGGCCTGGC...TCCCAGAAAAGGAACAGGGCAAGAATACAGCAGGAAGGAACCGGTTCCCTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
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| CDS-3UTR TCA 90 bp | CCTGCTGTATTCTTGCCCTGTTCCTTTTCTGGGATCCACTCCAAGCTGCTCACCCAGCCCAGGGCCTGTTaGATGAATACTGCCCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PAVFLPCSFSGIHSKLLTQPRAC*MNTAPE Trigger: CTCTGGGGCAGTATTCATTCAACAGGCCCTGGGCTG...GGTGAGCAGCTTGGAGTGGATCCCAGAAAAGGAACAGGGCAAGAATACAGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
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| CDS-3UTR GCA 90 bp | CCTGCTGTATTCTTGCCCTGTTCCTTTTCTGGGATCCACTCCAAGCTGCTCACCCACCATGCTCCGTCCTaGCAGGAAGTAGCCACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PAVFLPCSFSGIHSKLLTHHAPS*QEVATN Trigger: GTTGGTGGCTACTTCCTGGCAGGACGGAGCATGGTG...GGTGAGCAGCTTGGAGTGGATCCCAGAAAAGGAACAGGGCAAGAATACAGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
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| CDS-3UTR GCA 90 bp | TGGCATCCAACACCCTCGACTTTATGCATAGAAGCCCCAGAGGAACACAGCCACGTCTGTGTACATCAGTaGCGCCAGCCCTCCTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: WHPTPSTLCIEAPEEHSHVCVHQ*RQPSCH Trigger: GTGACAGGAGGGCTGGCGGCACTGATGTACACAGAC...GTGGCTGTGTTCCTCTGGGGCTTCTATGCATAAAGTCGAGGGTGTTGGATGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205720.2 |
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| CDS-3UTR GCA 90 bp | AAAGAGGAAGGGAACCGGTTCCTTCCTGCTGTATTCTTGCCCTGTTCCTTTTCTTCCTGGCCCCCGTTCTaGACAGGAGCAGGGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KEEGNRFLPAVFLPCSFSSWPPF*TGAGAG Trigger: TCCAGCCCCTGCTCCTGTGCAGAACGGGGGCCAGGA...AGAAAAGGAACAGGGCAAGAATACAGCAGGAAGGAACCGGTTCCCTTCCTCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
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| CDS-3UTR CCA 90 bp | ACAGCCACGGTCATCATGAGTAGGGCATTGAGGTTGACTACTCGTGCCCAGCGGGCTGGTAGCAGGTGCTaGAGATGTTGCCAACAGATG | + |
|
Preference number: 4 (lower is better) Translates to: TATVIMSRALRLTTRAQRAGSRC*RCCQQM Trigger: CATCTGTTGGCAACATCTCCAGCACCTGCTACCAGC...CCGCTGGGCACGAGTAGTCAACCTCAATGCCCTACTCATGATGACCGTGGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205720.2 |
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| CDS-3UTR CCA 90 bp | GTAAAGAGGAAGGGAACCGGTTCCTTCCTGCTGTATTCTTGCCCTGTTCCTTTTTGTCCTCCAGCCGCCTaGTGGTTGCCGCCACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VKRKGTGSFLLYSCPVPFCPPAA*WLPPPP Trigger: AGGAGGTGGCGGCAACCACCAGGCGGCTGGAGGACA...AAAAGGAACAGGGCAAGAATACAGCAGGAAGGAACCGGTTCCCTTCCTCTTTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
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| 3UTR CAA 72 bp | ACGAAGAGCGCCCTCAGCAAACTGGGCTGTCCCAACTaGTTCATATCCCCACGCCAGGAGCTTCTCCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TKSALSKLGCPN*FISPRQELLQV Trigger: AACTTGGAGAAGCTCCTGGCGTGGGGATATGAACAAGTTGGGACAGCCCAGTTTGCTGAGGGCGCTCTTCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153418.2 |
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| 3UTR CAA 72 bp | AACACAGCCACGGTCATCATGAGTAGGGCATTGAGGTaGACTACTCGTGCCCAGCGGGGATCCTCACTGATG | + |
|
Preference number: 4 (lower is better) Translates to: NTATVIMSRALR*TTRAQRGSSLM Trigger: CATCAGTGAGGATCCCCGCTGGGCACGAGTAGTCAACCTCAATGCCCTACTCATGATGACCGTGGCTGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205720.2 ENSMUST00000206703.2 |
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| CDS-3UTR TCA 90 bp | GTATTCTTGCCCTGTTCCTTTTCTGGGATCCACTCCAAGCTGCTCACCCTTACTCGGACACCGCCACGATaGATACCACCCAGAGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VFLPCSFSGIHSKLLTLTRTPPR*IPPRAF Trigger: GAAGGCTCTGGGTGGTATTCATCGTGGCGGTGTCCG...AGTAAGGGTGAGCAGCTTGGAGTGGATCCCAGAAAAGGAACAGGGCAAGAATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
||
| CDS-3UTR GCA 90 bp | AGCACCACGAAGAGCGCCCTCAGCAAACTGGGCTGTCCCAACTTGTTCATATCCCCACAAAATGACCGCTaGCGATGTTGCTGGCGAACA | + |
|
Preference number: 4 (lower is better) Translates to: STTKSALSKLGCPNLFISPQNDR*RCCWRT Trigger: TGTTCGCCAGCAACATCGGCAGCGGTCATTTTGTGG...GGATATGAACAAGTTGGGACAGCCCAGTTTGCTGAGGGCGCTCTTCGTGGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153418.2 |
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| CDS-3UTR GCA 90 bp | GTATTCTTGCCCTGTTCCTTTTCTGGGATCCACTCCAAGCTGCTCACCCTTACTTGCTGCGCCAGTCCCTaGCAGGCCCACAAAATGACC | + |
|
Preference number: 4 (lower is better) Translates to: VFLPCSFSGIHSKLLTLTCCASP*QAHKMT Trigger: GGTCATTTTGTGGGCCTGGCAGGGACTGGCGCAGCA...AGTAAGGGTGAGCAGCTTGGAGTGGATCCCAGAAAAGGAACAGGGCAAGAATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
||
| CDS-3UTR GCA 90 bp | TTGTGGGAAGTGACAACCAATCAAATGGACTGGACCCCGGGTAAAGAGGAAGGGGCCCACCAAAGCGCTTaGGGAGGTACTGAGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LWEVTTNQMDWTPGKEEGAHQSA*GGTEAL Trigger: CAATGCCTCAGTACCTCCGCAAGCGCTTTGGTGGGC...CCCTTCCTCTTTACCCGGGGTCCAGTCCATTTGATTGGTTGTCACTTCCCACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
||
| CDS-3UTR GCA 90 bp | CCCAGCTTTGATGTGAGTCAGATTCTTTCCAGCCAGGCACCGCTGCACTATTACGCCCACCAAAGCGCTTaGGGAGGTACTGAGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: PSFDVSQILSSQAPLHYYAHQSA*GGTEAL Trigger: CAATGCCTCAGTACCTCCGCAAGCGCTTTGGTGGGC...GTAATAGTGCAGCGGTGCCTGGCTGGAAAGAATCTGACTCACATCAAAGCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137038.3 |
||
| CDS-3UTR GCA 90 bp | AAGGGAACCGGTTCCTTCCTGCTGTATTCTTGCCCTGTTCCTTTTCTGGGATCCCGCTCCTCCTTGCTGTaGCGGAGACTGAAAACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KGTGSFLLYSCPVPFLGSRSSLL*RRLKTR Trigger: CCTGGTTTTCAGTCTCCGGCACAGCAAGGAGGAGCG...GGATCCCAGAAAAGGAACAGGGCAAGAATACAGCAGGAAGGAACCGGTTCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
||
| CDS-3UTR GCA 90 bp | ATGGCATCCAACACCCTCGACTTTATGCATAGAAGCCCCAGAGGAACACAGCCACGCTCCTCCTTGCTGTaGCGGAGACTGAAAACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MASNTLDFMHRSPRGTQPRSSLL*RRLKTR Trigger: CCTGGTTTTCAGTCTCCGGCACAGCAAGGAGGAGCG...TGGCTGTGTTCCTCTGGGGCTTCTATGCATAAAGTCGAGGGTGTTGGATGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205720.2 |
||
| CDS-3UTR GCA 90 bp | TTCTTGCCCTGTTCCTTTTCTGGGATCCACTCCAAGCTGCTCACCCTTACTCTTGTCTGTGTACATCAGTaGCGCCAGCCCTCCTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FLPCSFSGIHSKLLTLTLVCVHQ*RQPSCH Trigger: GTGACAGGAGGGCTGGCGGCACTGATGTACACAGAC...AAGAGTAAGGGTGAGCAGCTTGGAGTGGATCCCAGAAAAGGAACAGGGCAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
||
| CDS-3UTR GCA 90 bp | CGGTTCCTTCCTGCTGTATTCTTGCCCTGTTCCTTTTCTGGGATCCACTCCAAGTCGGCTGGTAGCAGGTaGTGGAGATGTTGCCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: RFLPAVFLPCSFSGIHSKSAGSR*WRCCQQ Trigger: CTGTTGGCAACATCTCCAGCACCTGCTACCAGCCGA...CTTGGAGTGGATCCCAGAAAAGGAACAGGGCAAGAATACAGCAGGAAGGAACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
||
| CDS-3UTR GCA 90 bp | AACACAGCCACGGTCATCATGAGTAGGGCATTGAGGTTGACTACTCGTGCCCAGCCCAAGTTCAGAGCCTaGCTCTACGTGTTGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NTATVIMSRALRLTTRAQPKFRA*LYVLLH Trigger: ATGGAGCAACACGTAGAGGCAGGCTCTGAACTTGGG...CTGGGCACGAGTAGTCAACCTCAATGCCCTACTCATGATGACCGTGGCTGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205720.2 |
||
| CDS-3UTR GCA 90 bp | GGTTCCTTCCTGCTGTATTCTTGCCCTGTTCCTTTTCTGGGATCCACTCCAAGCCGCAGACACTGGAGGTaGCAGATAGCTGGAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSFLLYSCPVPFLGSTPSRRHWR*QIAGDR Trigger: TCTGTCTCCAGCTATCTGGCACCTCCAGTGTCTGCG...GCTTGGAGTGGATCCCAGAAAAGGAACAGGGCAAGAATACAGCAGGAAGGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
||
| CDS-3UTR CCA 90 bp | ACGGTCATCATGAGTAGGGCATTGAGGTTGACTACTCGTGCCCAGCGGGGATCCCAACAGATGGATCCTTaGACACCGTCAGTGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TVIMSRALRLTTRAQRGSQQMDP*TPSVKS Trigger: TGACTTCACTGACGGTGTCCAAGGATCCATCTGTTG...GGATCCCCGCTGGGCACGAGTAGTCAACCTCAATGCCCTACTCATGATGACCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205720.2 |
||
| CDS-3UTR CCA 90 bp | ACCGGTTCCTTCCTGCTGTATTCTTGCCCTGTTCCTTTTCTGGGATCCACTCCACTTCACCACGAGCCGTaGGTAGGCGATGTTAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TGSFLLYSCPVPFLGSTPLHHEP*VGDVRA Trigger: TGCTCTAACATCGCCTACCCACGGCTCGTGGTGAAG...TGGAGTGGATCCCAGAAAAGGAACAGGGCAAGAATACAGCAGGAAGGAACCGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
||
| CDS-3UTR CCA 90 bp | GGACCTCTTCCATCTCCATTGCACATTCCTGGCCCCCGTTCTGCACAGGAGCAGGAGGTGCCAGATAGCTaGAGACAGACTGAATGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: GPLPSPLHIPGPRSAQEQEVPDS*RQTECN Trigger: ATTACATTCAGTCTGTCTCCAGCTATCTGGCACCTC...CTGCTCCTGTGCAGAACGGGGGCCAGGAATGTGCAATGGAGATGGAAGAGGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206703.2 |
||
| CDS-3UTR CCA 90 bp | GTATTCTTGCCCTGTTCCTTTTCTGGGATCCACTCCAAGCTGCTCACCCTTACTGATGCTTCTGAGGGATaGGCGCAGTGCACAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VFLPCSFSGIHSKLLTLTDASEG*AQCTGR Trigger: TCTCCCTGTGCACTGCGCCCATCCCTCAGAAGCATC...AGTAAGGGTGAGCAGCTTGGAGTGGATCCCAGAAAAGGAACAGGGCAAGAATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
||
| CDS-3UTR TCA 90 bp | CTTGCCCTGTTCCTTTTCTGGGATCCACTCCAAGCTGCTCACCCTTACTCTTTGCTTGGACACCGTCAGTaGAGTCATTGCTCCCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LALFLFWDPLQAAHPYSLLGHRQ*SHCSQV Trigger: TACCTGGGAGCAATGACTTCACTGACGGTGTCCAAG...CAAAGAGTAAGGGTGAGCAGCTTGGAGTGGATCCCAGAAAAGGAACAGGGCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
||
| CDS-3UTR TCA 90 bp | CCTGCTGTATTCTTGCCCTGTTCCTTTTCTGGGATCCACTCCAAGCTGCTCACCCACCCAGCTTTGATGTaGGTCAGATTCTTTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PAVFLPCSFSGIHSKLLTHPALM*VRFFPA Trigger: GGCTGGAAAGAATCTGACTCACATCAAAGCTGGGTG...GGTGAGCAGCTTGGAGTGGATCCCAGAAAAGGAACAGGGCAAGAATACAGCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
||
| CDS-3UTR GCA 90 bp | AAGGGAACCGGTTCCTTCCTGCTGTATTCTTGCCCTGTTCCTTTTCTGGGATCCCCCAAGTTCAGAGCCTaGCTCTACGTGTTGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KGTGSFLLYSCPVPFLGSPKFRA*LYVLLH Trigger: ATGGAGCAACACGTAGAGGCAGGCTCTGAACTTGGG...GGATCCCAGAAAAGGAACAGGGCAAGAATACAGCAGGAAGGAACCGGTTCCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
||
| CDS-3UTR GCA 90 bp | AAAGAGGAAGGGAACCGGTTCCTTCCTGCTGTATTCTTGCCCTGTTCCTTTTCTGAGGGATGGGCGCAGTaGACAGGGAGATTCCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KEEGNRFLPAVFLPCSFSEGWAQ*TGRFQV Trigger: CACTTGGAATCTCCCTGTGCACTGCGCCCATCCCTC...AGAAAAGGAACAGGGCAAGAATACAGCAGGAAGGAACCGGTTCCCTTCCTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
||
| CDS-3UTR CCA 90 bp | ACCGGTTCCTTCCTGCTGTATTCTTGCCCTGTTCCTTTTCTGGGATCCACTCCAGCTGGTAGCAGGTGCTaGAGATGTTGCCAACAGATG | + |
|
Preference number: 4 (lower is better) Translates to: TGSFLLYSCPVPFLGSTPAGSRC*RCCQQM Trigger: CATCTGTTGGCAACATCTCCAGCACCTGCTACCAGC...TGGAGTGGATCCCAGAAAAGGAACAGGGCAAGAATACAGCAGGAAGGAACCGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
||
| CDS-3UTR CCA 90 bp | GTATTCTTGCCCTGTTCCTTTTCTGGGATCCACTCCAAGCTGCTCACCCTTACTTCCATTGCACATTCCTaGCCCCCGTTCTGCACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VFLPCSFSGIHSKLLTLTSIAHS*PPFCTG Trigger: TCCTGTGCAGAACGGGGGCCAGGAATGTGCAATGGA...AGTAAGGGTGAGCAGCTTGGAGTGGATCCCAGAAAAGGAACAGGGCAAGAATAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
||
| CDS-3UTR TCA 90 bp | GTATTCTTGCCCTGTTCCTTTTCTGGGATCCACTCCAAGCTGCTCACCCTTACTCGCTGCACTATTACCTaGTCGCTGCACCAATACCAG | + |
|
Preference number: 4 (lower is better) Translates to: VFLPCSFSGIHSKLLTLTRCTIT*SLHQYQ Trigger: CTGGTATTGGTGCAGCGATCAGGTAATAGTGCAGCG...AGTAAGGGTGAGCAGCTTGGAGTGGATCCCAGAAAAGGAACAGGGCAAGAATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
||
| CDS-3UTR GCA 90 bp | CCAATTGGCCATCATCTTGTGGGAAGTGACAACCAATCAAATGGACTGGACCCCCCACAAAATGACCGCTaGCGATGTTGCTGGCGAACA | + |
|
Preference number: 4 (lower is better) Translates to: PIGHHLVGSDNQSNGLDPPQNDR*RCCWRT Trigger: TGTTCGCCAGCAACATCGGCAGCGGTCATTTTGTGG...GGGGTCCAGTCCATTTGATTGGTTGTCACTTCCCACAAGATGATGGCCAATTGG 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
||
| CDS-3UTR GCA 90 bp | TTGTGGGAAGTGACAACCAATCAAATGGACTGGACCCCGGGTAAAGAGGAAGGGCTATTACCTGATCGCTaGACCAATACCAGCCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LWEVTTNQMDWTPGKEEGLLPDR*TNTSPR Trigger: TCTCGGGCTGGTATTGGTGCAGCGATCAGGTAATAG...CCCTTCCTCTTTACCCGGGGTCCAGTCCATTTGATTGGTTGTCACTTCCCACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
||
| CDS-3UTR GCA 90 bp | TCTTGCCCTGTTCCTTTTCTGGGATCCACTCCAAGCTGCTCACCCTTACTCTTTACGGGGCACAAAGAGTaGAAGCACAAAGACCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SCPVPFLGSTPSCSPLLFTGHKE*KHKDRR Trigger: TCTGCGGTCTTTGTGCTTGCACTCTTTGTGCCCCGT...AAAGAGTAAGGGTGAGCAGCTTGGAGTGGATCCCAGAAAAGGAACAGGGCAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
||
| 3UTR CAA 72 bp | AAAGAGGAAGGGAACCGGTTCCTTCCTGCTGTATTCTaGCCCTGTTCCTTTTCTGGGATCCACTCCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KEEGNRFLPAVF*PCSFSGIHSKL Trigger: CAGCTTGGAGTGGATCCCAGAAAAGGAACAGGGCAAGAATACAGCAGGAAGGAACCGGTTCCCTTCCTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTGCCCTGTTCCTTTTCTGGGATCCACTCCAAGCTGCTCACCCTTACTCTTACAAGCCAACACCAATaGCCAGCAGGAAATAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLPCSFSGIHSKLLTLTLTSQHQ*PAGNRQ Trigger: CTGCCTATTTCCTGCTGGTCATTGGTGTTGGCTTGT...AAGAGTAAGGGTGAGCAGCTTGGAGTGGATCCCAGAAAAGGAACAGGGCAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
||
| CDS-3UTR GCA 90 bp | GCACCCAGCTTTGATGTGAGTCAGATTCTTTCCAGCCAGGCACCGCTGCACTATAGAATGACGAAGGTCTaGACAGTGTCTGTGTACATC | + |
|
Preference number: 4 (lower is better) Translates to: APSFDVSQILSSQAPLHYRMTKV*TVSVYI Trigger: GATGTACACAGACACTGTGCAGACCTTCGTCATTCT...ATAGTGCAGCGGTGCCTGGCTGGAAAGAATCTGACTCACATCAAAGCTGGGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137038.3 |
||
| CDS-3UTR GCA 90 bp | TGGCATCCAACACCCTCGACTTTATGCATAGAAGCCCCAGAGGAACACAGCCACAGAATGACGAAGGTCTaGACAGTGTCTGTGTACATC | + |
|
Preference number: 4 (lower is better) Translates to: WHPTPSTLCIEAPEEHSHRMTKV*TVSVYI Trigger: GATGTACACAGACACTGTGCAGACCTTCGTCATTCT...GTGGCTGTGTTCCTCTGGGGCTTCTATGCATAAAGTCGAGGGTGTTGGATGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205720.2 |
||
| CDS-3UTR CCA 90 bp | TGCCCTGTTCCTTTTCTGGGATCCACTCCAAGCTGCTCACCCTTACTCTTTGTGCAACAGATGGATCCTTaGACACCGTCAGTGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CPVPFLGSTPSCSPLLFVQQMDP*TPSVKS Trigger: TGACTTCACTGACGGTGTCCAAGGATCCATCTGTTG...CACAAAGAGTAAGGGTGAGCAGCTTGGAGTGGATCCCAGAAAAGGAACAGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
||
| CDS-3UTR CCA 90 bp | CCTGCTGTATTCTTGCCCTGTTCCTTTTCTGGGATCCACTCCAAGCTGCTCACCGAGGTGCCAGATAGCTaGAGACAGACTGAATGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: PAVFLPCSFSGIHSKLLTEVPDS*RQTECN Trigger: ATTACATTCAGTCTGTCTCCAGCTATCTGGCACCTC...GGTGAGCAGCTTGGAGTGGATCCCAGAAAAGGAACAGGGCAAGAATACAGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
||
| CDS-3UTR TCA 90 bp | TTGTGGGAAGTGACAACCAATCAAATGGACTGGACCCCGGGTAAAGAGGAAGGGAGATGCACCCAGCTTTaGTGTGAGTCAGATTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LWEVTTNQMDWTPGKEEGRCTQL*CESDSF Trigger: GAAAGAATCTGACTCACATCAAAGCTGGGTGCATCT...CCCTTCCTCTTTACCCGGGGTCCAGTCCATTTGATTGGTTGTCACTTCCCACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
||
| CDS-3UTR GCA 90 bp | TTGTGGGAAGTGACAACCAATCAAATGGACTGGACCCCGGGTAAAGAGGAAGGGAGAATGACGAAGGTCTaGACAGTGTCTGTGTACATC | + |
|
Preference number: 4 (lower is better) Translates to: LWEVTTNQMDWTPGKEEGRMTKV*TVSVYI Trigger: GATGTACACAGACACTGTGCAGACCTTCGTCATTCT...CCCTTCCTCTTTACCCGGGGTCCAGTCCATTTGATTGGTTGTCACTTCCCACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
||
| CDS-3UTR GCA 90 bp | GTAAAGAGGAAGGGAACCGGTTCCTTCCTGCTGTATTCTTGCCCTGTTCCTTTTTCAATCAGGACCTTCTaGTCCCCAAGTTCAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VKRKGTGSFLLYSCPVPFSIRTF*SPSSEP Trigger: AGGCTCTGAACTTGGGGAGCAGAAGGTCCTGATTGA...AAAAGGAACAGGGCAAGAATACAGCAGGAAGGAACCGGTTCCCTTCCTCTTTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
||
| CDS-3UTR GCA 90 bp | AAGGGAACCGGTTCCTTCCTGCTGTATTCTTGCCCTGTTCCTTTTCTGGGATCCCTGTTGAATGAATACTaGCCCAGAGAACATATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KGTGSFLLYSCPVPFLGSLLNEY*PREHIH Trigger: GTGGATATGTTCTCTGGGGCAGTATTCATTCAACAG...GGATCCCAGAAAAGGAACAGGGCAAGAATACAGCAGGAAGGAACCGGTTCCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
||
| CDS-3UTR GCA 90 bp | AAAGAGGAAGGGAACCGGTTCCTTCCTGCTGTATTCTTGCCCTGTTCCTTTTCTGCTGTTAAAGATGGATaGCAGAGAAGACATGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KEEGNRFLPAVFLPCSFSAVKDG*QRRHEG Trigger: GCCCTCATGTCTTCTCTGGCATCCATCTTTAACAGC...AGAAAAGGAACAGGGCAAGAATACAGCAGGAAGGAACCGGTTCCCTTCCTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
||
| CDS-3UTR CAA 90 bp | GGGATCCTCACTGATGTCCTCCAGCCGCCTGGTGGTTGCCGCCACCTCCTCGGTTCCTCCCGCTCCTCCTaGCTGTGCCGGAGACTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GILTDVLQPPGGCRHLLGSSRSS*LCRRLK Trigger: TTTCAGTCTCCGGCACAGCAAGGAGGAGCGGGAGGA...ACCGAGGAGGTGGCGGCAACCACCAGGCGGCTGGAGGACATCAGTGAGGATCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205720.2 ENSMUST00000206703.2 |
||
| CDS TCA 90 bp | CTGAGGGTCGCACACAGCTGCCCGAGCCAAAGAAGAACTCGGGTATaGGACGAGCTAGGCCCATCAGCAGGCCCCCAACTAGTCCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LRVAHSCPSQRRTRV*DELGPSAGPQLVPR Trigger: TCTGGGGACTAGTTGGGGGCCTGCTGATGGGCCTAGCTCGTCTCATACCCGAGTTCTTCTTTGGCTCGGGCAGCTGTGTGCGACCCTCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118169.8 ENSMUST00000205720.2 |
||
| CDS CCA 90 bp | ATACCAGCCCGAGACAATGGTAAGCCCCAGGAGCAGCGCAGGCCATaGCAGGTCTCCTGTCACAGGGTCACGCAGCAGGTGATAGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: IPARDNGKPQEQRRP*QVSCHRVTQQVIGV Trigger: GACTCCTATCACCTGCTGCGTGACCCTGTGACAGGAGACCTGCCATGGCCTGCGCTGCTCCTGGGGCTTACCATTGTCTCGGGCTGGTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033045.11 ENSMUST00000118169.8 ENSMUST00000205720.2 ENSMUST00000206716.2 |
||
| CDS TCA 90 bp | GAGCTGCCTGCACCACTGGCAGCCAAGCCACGGACACCGCCACGATaGATACCACCCAGAGCCTTCCAACTAGCAGCAGCTCCTTATCAC | + |
|
Preference number: 5 (lower is better) Translates to: ELPAPLAAKPRTPPR*IPPRAFQLAAAPYH Trigger: GTGATAAGGAGCTGCTGCTAGTTGGAAGGCTCTGGGTGGTATTCATCGTGGCGGTGTCCGTGGCTTGGCTGCCAGTGGTGCAGGCAGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118169.8 ENSMUST00000206703.2 ENSMUST00000206716.2 |
||
| CDS-3UTR CAA 90 bp | AACACAGCCACGGTCATCATGAGTAGGGCATTGAGGTTGACTACTCGTGCCCAGCCACCGCCAAGCCACTaGCTGCGCCAGTCCCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: NTATVIMSRALRLTTRAQPPPSH*LRQSLP Trigger: TGGCAGGGACTGGCGCAGCAAGTGGCTTGGCGGTGG...CTGGGCACGAGTAGTCAACCTCAATGCCCTACTCATGATGACCGTGGCTGTGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205720.2 |
||
| CDS-3UTR CAA 90 bp | GGGATCCTCACTGATGTCCTCCAGCCGCCTGGTGGTTGCCGCCACCTCCTCGGTCCGTCAGTGAAGTCATaGCTCCCAGGTATTTGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: GILTDVLQPPGGCRHLLGPSVKS*LPGICR Trigger: TCGACAAATACCTGGGAGCAATGACTTCACTGACGG...ACCGAGGAGGTGGCGGCAACCACCAGGCGGCTGGAGGACATCAGTGAGGATCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205720.2 |
||
| CDS-3UTR CAA 90 bp | CAGGAGCAGCGCAGGCCATGGCAGGTCTCCTGTCACAGGGTCACGCAGCAGGTGCAGGTGCTGGAGATGTaGCCAACAGATGGATCCATA | + |
|
Preference number: 5 (lower is better) Translates to: QEQRRPWQVSCHRVTQQVQVLEM*PTDGSI Trigger: TATGGATCCATCTGTTGGCAACATCTCCAGCACCTG...CACCTGCTGCGTGACCCTGTGACAGGAGACCTGCCATGGCCTGCGCTGCTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137038.3 |
||
| CDS TCA 90 bp | GGCGAAATAGAGGTAGTGTACCCGACAGAAGAGTGCCGGGCACGCTaGGGGTCGCACACAGCTGCCCGAGCCAAAGAAGAACTCGGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: GEIEVVYPTEECRAR*GSHTAARAKEELGY Trigger: ATACCCGAGTTCTTCTTTGGCTCGGGCAGCTGTGTGCGACCCTCAGCGTGCCCGGCACTCTTCTGTCGGGTACACTACCTCTATTTCGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118169.8 ENSMUST00000205720.2 |
||
| CDS GCA 90 bp | GGTCACGCAGCAGGTGATAGGAGTCAGGCCTCGGCTGGTAGCAGGTaGTGGAGATGTTGCCAACAGATGGATCCTTGGACACCGTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GHAAGDRSQASAGSR*WRCCQQMDPWTPSV Trigger: CACTGACGGTGTCCAAGGATCCATCTGTTGGCAACATCTCCAGCACCTGCTACCAGCCGAGGCCTGACTCCTATCACCTGCTGCGTGACC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033045.11 ENSMUST00000118169.8 ENSMUST00000142841.8 ENSMUST00000205720.2 ENSMUST00000206716.2 ENSMUST00000206909.2 |
||
| CDS-3UTR CAA 90 bp | ACGGTCATCATGAGTAGGGCATTGAGGTTGACTACTCGTGCCCAGCGGGGATCCTCCTCCCGCTCCTCCTaGCTGTGCCGGAGACTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: TVIMSRALRLTTRAQRGSSSRSS*LCRRLK Trigger: TTTCAGTCTCCGGCACAGCAAGGAGGAGCGGGAGGA...GGATCCCCGCTGGGCACGAGTAGTCAACCTCAATGCCCTACTCATGATGACCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205720.2 ENSMUST00000206703.2 |
||
| CDS-3UTR CAA 90 bp | TGGACCTCTTCCATCTCCATTGCACATTCCTGGCCCCCGTTCTGCACAGGAGCACCCAGAAGGCTCCCATaGGGCATGAGCTTCACCACG | + |
|
Preference number: 5 (lower is better) Translates to: WTSSISIAHSWPPFCTGAPRRLP*GMSFTT Trigger: CGTGGTGAAGCTCATGCCCAATGGGAGCCTTCTGGG...TGCTCCTGTGCAGAACGGGGGCCAGGAATGTGCAATGGAGATGGAAGAGGTCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205720.2 |
||
| CDS GCA 90 bp | GACTGGACCTCTTCCATCTCCATTGCACATTCCTGGCCCCCGTTCTaGACAGGAGCAGGGGCTGGACCTTCTAACTCATCAGCATCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: DWTSSISIAHSWPPF*TGAGAGPSNSSASR Trigger: CCTGGATGCTGATGAGTTAGAAGGTCCAGCCCCTGCTCCTGTGCAGAACGGGGGCCAGGAATGTGCAATGGAGATGGAAGAGGTCCAGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118169.8 ENSMUST00000206716.2 |
||
| CDS CCA 90 bp | CACGCAGCAGGTGATAGGAGTCAGGCCTCGGCTGGTAGCAGGTGCTaGAGATGTTGCCAACAGATGGATCCTTGGACACCGTCAGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HAAGDRSQASAGSRC*RCCQQMDPWTPSVK Trigger: CTTCACTGACGGTGTCCAAGGATCCATCTGTTGGCAACATCTCCAGCACCTGCTACCAGCCGAGGCCTGACTCCTATCACCTGCTGCGTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033045.11 ENSMUST00000118169.8 ENSMUST00000142841.8 ENSMUST00000205720.2 ENSMUST00000206716.2 ENSMUST00000206909.2 |
||
| CDS-3UTR CAA 90 bp | CCAATTGGCCATCATCTTGTGGGAAGTGACAACCAATCAAATGGACTGGACCCCCCACCGCCAAGCCACTaGCTGCGCCAGTCCCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PIGHHLVGSDNQSNGLDPPPPSH*LRQSLP Trigger: TGGCAGGGACTGGCGCAGCAAGTGGCTTGGCGGTGG...GGGGTCCAGTCCATTTGATTGGTTGTCACTTCCCACAAGATGATGGCCAATTGG 58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
||
| CDS-3UTR CAA 90 bp | TTGTTCATATCCCCACGCCAGGAGCTTCTCCAAGTTGTGATCTTTCCAGGAGTTCCACCGCCAAGCCACTaGCTGCGCCAGTCCCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LFISPRQELLQVVIFPGVPPPSH*LRQSLP Trigger: TGGCAGGGACTGGCGCAGCAAGTGGCTTGGCGGTGG...AACTCCTGGAAAGATCACAACTTGGAGAAGCTCCTGGCGTGGGGATATGAACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153418.2 |
||
| CDS GCA 90 bp | GGTGATAGGAGTCAGGCCTCGGCTGGTAGCAGGTGCTGGAGATGTTaGCAACAGATGGATCCTTGGACACCGTCAGTGAAGTCATTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GDRSQASAGSRCWRC*QQMDPWTPSVKSLL Trigger: GAGCAATGACTTCACTGACGGTGTCCAAGGATCCATCTGTTGGCAACATCTCCAGCACCTGCTACCAGCCGAGGCCTGACTCCTATCACC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033045.11 ENSMUST00000118169.8 ENSMUST00000142841.8 ENSMUST00000205720.2 ENSMUST00000206716.2 ENSMUST00000206909.2 |
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| CDS CCA 90 bp | GCGGAGGTACTGAGGCATTGTGATCACACCAGCGGTCAGATACACTaGCACAAAAAGCCATCCGAGGAGCAGCACCACGAAGAGCGCATT | + |
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Preference number: 5 (lower is better) Translates to: AEVLRHCDHTSGQIH*HKKPSEEQHHEERI Trigger: AATGCGCTCTTCGTGGTGCTGCTCCTCGGATGGCTTTTTGTGCCAGTGTATCTGACCGCTGGTGTGATCACAATGCCTCAGTACCTCCGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000033045.11 ENSMUST00000118169.8 ENSMUST00000142841.8 ENSMUST00000205720.2 ENSMUST00000206909.2 |
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| CDS CCA 90 bp | TCCTCCCGCTCCTCCTTGCTGTGCCGGAGACTGAAAACCAGGCGATaGAGCTTCTCATTAACACGGGGCACAAAGAGTGCAAGCACAAAG | + |
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Preference number: 5 (lower is better) Translates to: SSRSSLLCRRLKTRR*SFSLTRGTKSASTK Trigger: CTTTGTGCTTGCACTCTTTGTGCCCCGTGTTAATGAGAAGCTCCATCGCCTGGTTTTCAGTCTCCGGCACAGCAAGGAGGAGCGGGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206716.2 |
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| CDS-3UTR CAA 90 bp | GGACCTCTTCCATCTCCATTGCACATTCCTGGCCCCCGTTCTGCACAGGAGCAGATTGCTCCCAGGTATTaGTCGAAGAGACCCGAGTAC | + |
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Preference number: 5 (lower is better) Translates to: GPLPSPLHIPGPRSAQEQIAPRY*SKRPEY Trigger: GTACTCGGGTCTCTTCGACAAATACCTGGGAGCAAT...CTGCTCCTGTGCAGAACGGGGGCCAGGAATGTGCAATGGAGATGGAAGAGGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205720.2 |
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| CDS-3UTR CAA 90 bp | TGGACCTCTTCCATCTCCATTGCACATTCCTGGCCCCCGTTCTGCACAGGAGCACAGGTGCTGGAGATGTaGCCAACAGATGGATCCTTG | + |
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Preference number: 5 (lower is better) Translates to: WTSSISIAHSWPPFCTGAQVLEM*PTDGSL Trigger: CAAGGATCCATCTGTTGGCAACATCTCCAGCACCTG...TGCTCCTGTGCAGAACGGGGGCCAGGAATGTGCAATGGAGATGGAAGAGGTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205720.2 |
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| CDS-3UTR CAA 90 bp | CCCTGTTCCTTTTCTGGGATCCACTCCAAGCTGCTCACCCTTACTCTTTGTGAGTCCTCCCGCTCCTCCTaGCTGTGCCGGAGACTGAAA | + |
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Preference number: 5 (lower is better) Translates to: PCSFSGIHSKLLTLTLCESSRSS*LCRRLK Trigger: TTTCAGTCTCCGGCACAGCAAGGAGGAGCGGGAGGA...CTCACAAAGAGTAAGGGTGAGCAGCTTGGAGTGGATCCCAGAAAAGGAACAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
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| CDS-3UTR CAA 90 bp | CCTGCTGTATTCTTGCCCTGTTCCTTTTCTGGGATCCACTCCAAGCTGCTCACCCCTCTTCCATCTCCATaGCACATTCCTGGCCCCCGT | + |
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Preference number: 5 (lower is better) Translates to: PAVFLPCSFSGIHSKLLTPLPSP*HIPGPR Trigger: ACGGGGGCCAGGAATGTGCAATGGAGATGGAAGAGG...GGTGAGCAGCTTGGAGTGGATCCCAGAAAAGGAACAGGGCAAGAATACAGCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
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| CDS-3UTR CAA 90 bp | GGTTCCTTCCTGCTGTATTCTTGCCCTGTTCCTTTTCTGGGATCCACTCCAAGCCCAGCCCAGGGCCTGTaGAATGAATACTGCCCCAGA | + |
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Preference number: 5 (lower is better) Translates to: GSFLLYSCPVPFLGSTPSPAQGL*NEYCPR Trigger: TCTGGGGCAGTATTCATTCAACAGGCCCTGGGCTGG...GCTTGGAGTGGATCCCAGAAAAGGAACAGGGCAAGAATACAGCAGGAAGGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
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| CDS-3UTR CAA 90 bp | CCCAGCTTTGATGTGAGTCAGATTCTTTCCAGCCAGGCACCGCTGCACTATTACCCAGCCCAGGGCCTGTaGAATGAATACTGCCCCAGA | + |
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Preference number: 5 (lower is better) Translates to: PSFDVSQILSSQAPLHYYPAQGL*NEYCPR Trigger: TCTGGGGCAGTATTCATTCAACAGGCCCTGGGCTGG...GTAATAGTGCAGCGGTGCCTGGCTGGAAAGAATCTGACTCACATCAAAGCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137038.3 |
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| CDS-3UTR CAA 90 bp | GGTTCCTTCCTGCTGTATTCTTGCCCTGTTCCTTTTCTGGGATCCACTCCAAGCAGTAGGGCATTGAGGTaGACTACTCGTGCCCAGCGG | + |
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Preference number: 5 (lower is better) Translates to: GSFLLYSCPVPFLGSTPSSRALR*TTRAQR Trigger: CCGCTGGGCACGAGTAGTCAACCTCAATGCCCTACT...GCTTGGAGTGGATCCCAGAAAAGGAACAGGGCAAGAATACAGCAGGAAGGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
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| CDS TCA 90 bp | GGTGCTGGAGATGTTGCCAACAGATGGATCCTTGGACACCGTCAGTaGAGTCATTGCTCCCAGGTATTTGTCGAAGAGACCCGAGTACCC | + |
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Preference number: 5 (lower is better) Translates to: GAGDVANRWILGHRQ*SHCSQVFVEETRVP Trigger: GGGTACTCGGGTCTCTTCGACAAATACCTGGGAGCAATGACTTCACTGACGGTGTCCAAGGATCCATCTGTTGGCAACATCTCCAGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033045.11 ENSMUST00000118169.8 ENSMUST00000142841.8 ENSMUST00000205720.2 ENSMUST00000206716.2 ENSMUST00000206909.2 |
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| CDS-3UTR CAA 90 bp | AAAGAGGAAGGGAACCGGTTCCTTCCTGCTGTATTCTTGCCCTGTTCCTTTTCTAGTCCGCGCAGACCATaGGGCATGAGCTTCACCACG | + |
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Preference number: 5 (lower is better) Translates to: KEEGNRFLPAVFLPCSFSSPRRP*GMSFTT Trigger: CGTGGTGAAGCTCATGCCCAATGGTCTGCGCGGACT...AGAAAAGGAACAGGGCAAGAATACAGCAGGAAGGAACCGGTTCCCTTCCTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
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| CDS CCA 90 bp | TCGGCTGGTAGCAGGTGCTGGAGATGTTGCCAACAGATGGATCCTTaGACACCGTCAGTGAAGTCATTGCTCCCAGGTATTTGTCGAAGA | + |
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Preference number: 5 (lower is better) Translates to: SAGSRCWRCCQQMDP*TPSVKSLLPGICRR Trigger: TCTTCGACAAATACCTGGGAGCAATGACTTCACTGACGGTGTCCAAGGATCCATCTGTTGGCAACATCTCCAGCACCTGCTACCAGCCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033045.11 ENSMUST00000118169.8 ENSMUST00000142841.8 ENSMUST00000205720.2 ENSMUST00000206716.2 ENSMUST00000206909.2 |
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| CDS-3UTR CAA 90 bp | CCTGCTGTATTCTTGCCCTGTTCCTTTTCTGGGATCCACTCCAAGCTGCTCACCCCGTCAGTGAAGTCATaGCTCCCAGGTATTTGTCGA | + |
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Preference number: 5 (lower is better) Translates to: PAVFLPCSFSGIHSKLLTPSVKS*LPGICR Trigger: TCGACAAATACCTGGGAGCAATGACTTCACTGACGG...GGTGAGCAGCTTGGAGTGGATCCCAGAAAAGGAACAGGGCAAGAATACAGCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
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| CDS-3UTR CAA 90 bp | GGTTCCTTCCTGCTGTATTCTTGCCCTGTTCCTTTTCTGGGATCCACTCCAAGCCCAACAGATGGATCCTaGGACACCGTCAGTGAAGTC | + |
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Preference number: 5 (lower is better) Translates to: GSFLLYSCPVPFLGSTPSPTDGS*DTVSEV Trigger: GACTTCACTGACGGTGTCCAAGGATCCATCTGTTGG...GCTTGGAGTGGATCCCAGAAAAGGAACAGGGCAAGAATACAGCAGGAAGGAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
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| CDS-3UTR CAA 90 bp | ATGGCATCCAACACCCTCGACTTTATGCATAGAAGCCCCAGAGGAACACAGCCACCAACAGATGGATCCTaGGACACCGTCAGTGAAGTC | + |
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Preference number: 5 (lower is better) Translates to: MASNTLDFMHRSPRGTQPPTDGS*DTVSEV Trigger: GACTTCACTGACGGTGTCCAAGGATCCATCTGTTGG...TGGCTGTGTTCCTCTGGGGCTTCTATGCATAAAGTCGAGGGTGTTGGATGCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205720.2 |
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| CDS-3UTR CAA 90 bp | CGGTTCCTTCCTGCTGTATTCTTGCCCTGTTCCTTTTCTGGGATCCACTCCAAGCAGGTGCTGGAGATGTaGCCAACAGATGGATCCTTG | + |
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Preference number: 5 (lower is better) Translates to: RFLPAVFLPCSFSGIHSKQVLEM*PTDGSL Trigger: CAAGGATCCATCTGTTGGCAACATCTCCAGCACCTG...CTTGGAGTGGATCCCAGAAAAGGAACAGGGCAAGAATACAGCAGGAAGGAACCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
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| CDS-3UTR CAA 90 bp | CCAATTGGCCATCATCTTGTGGGAAGTGACAACCAATCAAATGGACTGGACCCCATTGCTCCCAGGTATTaGTCGAAGAGACCCGAGTAC | + |
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Preference number: 5 (lower is better) Translates to: PIGHHLVGSDNQSNGLDPIAPRY*SKRPEY Trigger: GTACTCGGGTCTCTTCGACAAATACCTGGGAGCAAT...GGGGTCCAGTCCATTTGATTGGTTGTCACTTCCCACAAGATGATGGCCAATTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118169.8 |
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| CDS TCA 72 bp | GCACCACTGGCAGCCAAGCCACGGACACCGCCACGATaGATACCACCCAGAGCCTTCCAACTAGCAGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: APLAAKPRTPPR*IPPRAFQLAAA Trigger: AGCTGCTGCTAGTTGGAAGGCTCTGGGTGGTATTCATCGTGGCGGTGTCCGTGGCTTGGCTGCCAGTGGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118169.8 ENSMUST00000206703.2 ENSMUST00000206716.2 |
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| CDS TCA 72 bp | GAGGTAGTGTACCCGACAGAAGAGTGCCGGGCACGCTaGGGGTCGCACACAGCTGCCCGAGCCAAAGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: EVVYPTEECRAR*GSHTAARAKEE Trigger: TTCTTCTTTGGCTCGGGCAGCTGTGTGCGACCCTCAGCGTGCCCGGCACTCTTCTGTCGGGTACACTACCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118169.8 ENSMUST00000205720.2 |
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| CDS TCA 72 bp | GCACACAGCTGCCCGAGCCAAAGAAGAACTCGGGTATaGGACGAGCTAGGCCCATCAGCAGGCCCCCAACTA | + |
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Preference number: 6 (lower is better) Translates to: AHSCPSQRRTRV*DELGPSAGPQL Trigger: TAGTTGGGGGCCTGCTGATGGGCCTAGCTCGTCTCATACCCGAGTTCTTCTTTGGCTCGGGCAGCTGTGTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118169.8 ENSMUST00000205720.2 |
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| CDS GCA 72 bp | GTGAGGATGAAGGCCCCGGCAAGAATGACGAAGGTCTaGACAGTGTCTGTGTACATCAGTGCCGCCAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: VRMKAPARMTKV*TVSVYISAASP Trigger: AGGGCTGGCGGCACTGATGTACACAGACACTGTGCAGACCTTCGTCATTCTTGCCGGGGCCTTCATCCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033045.11 ENSMUST00000118169.8 ENSMUST00000137038.3 ENSMUST00000142841.8 ENSMUST00000205720.2 ENSMUST00000206909.2 |
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| CDS GCA 72 bp | GCAGGTGATAGGAGTCAGGCCTCGGCTGGTAGCAGGTaGTGGAGATGTTGCCAACAGATGGATCCTTGGACA | + |
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Preference number: 6 (lower is better) Translates to: AGDRSQASAGSR*WRCCQQMDPWT Trigger: TGTCCAAGGATCCATCTGTTGGCAACATCTCCAGCACCTGCTACCAGCCGAGGCCTGACTCCTATCACCTGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033045.11 ENSMUST00000118169.8 ENSMUST00000142841.8 ENSMUST00000205720.2 ENSMUST00000206716.2 ENSMUST00000206909.2 |
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| CDS GCA 72 bp | TCTTCCATCTCCATTGCACATTCCTGGCCCCCGTTCTaGACAGGAGCAGGGGCTGGACCTTCTAACTCATCA | + |
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Preference number: 6 (lower is better) Translates to: SSISIAHSWPPF*TGAGAGPSNSS Trigger: TGATGAGTTAGAAGGTCCAGCCCCTGCTCCTGTGCAGAACGGGGGCCAGGAATGTGCAATGGAGATGGAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118169.8 ENSMUST00000206716.2 |
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| CDS CAA 72 bp | TTGGACACCGTCAGTGAAGTCATTGCTCCCAGGTATTaGTCGAAGAGACCCGAGTACCCGCCCACTTCATGG | + |
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Preference number: 6 (lower is better) Translates to: LDTVSEVIAPRY*SKRPEYPPTSW Trigger: CCATGAAGTGGGCGGGTACTCGGGTCTCTTCGACAAATACCTGGGAGCAATGACTTCACTGACGGTGTCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033045.11 ENSMUST00000118169.8 ENSMUST00000142841.8 ENSMUST00000205720.2 ENSMUST00000206716.2 ENSMUST00000206909.2 |
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| CDS CAA 90 bp | AGATGTTGCCAACAGATGGATCCTTGGACACCGTCAGTGAAGTCATaGCTCCCAGGTATTTGTCGAAGAGACCCGAGTACCCGCCCACTT | + |
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Preference number: 6 (lower is better) Translates to: RCCQQMDPWTPSVKS*LPGICRRDPSTRPL Trigger: AAGTGGGCGGGTACTCGGGTCTCTTCGACAAATACCTGGGAGCAATGACTTCACTGACGGTGTCCAAGGATCCATCTGTTGGCAACATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033045.11 ENSMUST00000118169.8 ENSMUST00000142841.8 ENSMUST00000205720.2 ENSMUST00000206716.2 ENSMUST00000206909.2 |
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| CDS CCA 72 bp | AGCAGGTGCTGGAGATGTTGCCAACAGATGGATCCTTaGACACCGTCAGTGAAGTCATTGCTCCCAGGTATT | + |
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Preference number: 6 (lower is better) Translates to: SRCWRCCQQMDP*TPSVKSLLPGI Trigger: AATACCTGGGAGCAATGACTTCACTGACGGTGTCCAAGGATCCATCTGTTGGCAACATCTCCAGCACCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033045.11 ENSMUST00000118169.8 ENSMUST00000142841.8 ENSMUST00000205720.2 ENSMUST00000206716.2 ENSMUST00000206909.2 |
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| CDS CAA 72 bp | GATGACCGAAGCGTAAATGTTCCAGCCCAGGGCCTGTaGAATGAATACTGCCCCAGAGAACATATCCACCGA | + |
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Preference number: 6 (lower is better) Translates to: DDRSVNVPAQGL*NEYCPREHIHR Trigger: TCGGTGGATATGTTCTCTGGGGCAGTATTCATTCAACAGGCCCTGGGCTGGAACATTTACGCTTCGGTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033045.11 ENSMUST00000118169.8 ENSMUST00000137038.3 ENSMUST00000142841.8 ENSMUST00000205720.2 ENSMUST00000206909.2 |
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| CDS CAA 72 bp | CAACAGATGGATCCTTGGACACCGTCAGTGAAGTCATaGCTCCCAGGTATTTGTCGAAGAGACCCGAGTACC | + |
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Preference number: 6 (lower is better) Translates to: QQMDPWTPSVKS*LPGICRRDPST Trigger: GGTACTCGGGTCTCTTCGACAAATACCTGGGAGCAATGACTTCACTGACGGTGTCCAAGGATCCATCTGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033045.11 ENSMUST00000118169.8 ENSMUST00000142841.8 ENSMUST00000205720.2 ENSMUST00000206716.2 ENSMUST00000206909.2 |
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| CDS TCA 72 bp | GATGTTGCCAACAGATGGATCCTTGGACACCGTCAGTaGAGTCATTGCTCCCAGGTATTTGTCGAAGAGACC | + |
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Preference number: 6 (lower is better) Translates to: DVANRWILGHRQ*SHCSQVFVEET Trigger: GGTCTCTTCGACAAATACCTGGGAGCAATGACTTCACTGACGGTGTCCAAGGATCCATCTGTTGGCAACATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033045.11 ENSMUST00000118169.8 ENSMUST00000142841.8 ENSMUST00000205720.2 ENSMUST00000206716.2 ENSMUST00000206909.2 |
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| CDS GCA 72 bp | GTAAATGTTCCAGCCCAGGGCCTGTTGAATGAATACTaGCCCAGAGAACATATCCACCGAGATCTTGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: VNVPAQGLLNEY*PREHIHRDLGE Trigger: TTCACCAAGATCTCGGTGGATATGTTCTCTGGGGCAGTATTCATTCAACAGGCCCTGGGCTGGAACATTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033045.11 ENSMUST00000118169.8 ENSMUST00000137038.3 ENSMUST00000142841.8 ENSMUST00000205720.2 ENSMUST00000206909.2 |
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