Pregenerated sensors for SLC5A11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030769Ensembl transcript IDs: ENSMUST00000033035.13, ENSMUST00000127655.8, ENSMUST00000131461.3, ENSMUST00000131933.8, ENSMUST00000167299.9
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GCTGGTCACACCGAGGCTGCGCGTAGACAAAGTCCAGGATCAGCCTaGCCAGTCCCAGCAGCAAGCCCAAGATCAGGCCTGAGAAGGCAC | + |
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Preference number: 5 (lower is better) Translates to: AGHTEAARRQSPGSA*PVPAASPRSGLRRH Trigger: GTGCCTTCTCAGGCCTGATCTTGGGCTTGCTGCTGGGACTGGTCAGGCTGATCCTGGACTTTGTCTACGCGCAGCCTCGGTGTGACCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033035.13 ENSMUST00000167299.9 |
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| CDS TCA 90 bp | TGCCTGGGAGACACACCATCGCCACAGGCTTTGGTCGTACTTTCTTaGACTGTCTCCAGCTGGATGCTGGTGCCAGGGGCCTCTGTAGTC | + |
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Preference number: 5 (lower is better) Translates to: CLGDTPSPQALVVLS*TVSSWMLVPGASVV Trigger: GACTACAGAGGCCCCTGGCACCAGCATCCAGCTGGAGACAGTTCAAGAAAGTACGACCAAAGCCTGTGGCGATGGTGTGTCTCCCAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033035.13 ENSMUST00000167299.9 |
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| CDS TCA 90 bp | TCCTGTGGGCAGAAGTTCCAGCACAAGTTTGGGGTACGCGATGTCTaGACAGCCAGAGGGGTTGCTACAGACCCTCTGGCAGATGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: SCGQKFQHKFGVRDV*TARGVATDPLADVR Trigger: CCTGACATCTGCCAGAGGGTCTGTAGCAACCCCTCTGGCTGTTCAGACATCGCGTACCCCAAACTTGTGCTGGAACTTCTGCCCACAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033035.13 ENSMUST00000131933.8 ENSMUST00000167299.9 |
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| CDS GCA 90 bp | CCAGCACAAGTTTGGGGTACGCGATGTCTGAACAGCCAGAGGGGTTaGTACAGACCCTCTGGCAGATGTCAGGATGCGCACAGGCTACTT | + |
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Preference number: 5 (lower is better) Translates to: PAQVWGTRCLNSQRG*YRPSGRCQDAHRLL Trigger: AAGTAGCCTGTGCGCATCCTGACATCTGCCAGAGGGTCTGTAGCAACCCCTCTGGCTGTTCAGACATCGCGTACCCCAAACTTGTGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033035.13 ENSMUST00000131933.8 ENSMUST00000167299.9 |
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| CDS TCA 90 bp | TTGCTACAGACCCTCTGGCAGATGTCAGGATGCGCACAGGCTACTTaGTCTGGGAAGAGGACTCTGCTGACCATCCCAGGGAACACCATC | + |
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Preference number: 5 (lower is better) Translates to: LLQTLWQMSGCAQAT*SGKRTLLTIPGNTI Trigger: GATGGTGTTCCCTGGGATGGTCAGCAGAGTCCTCTTCCCAGATCAAGTAGCCTGTGCGCATCCTGACATCTGCCAGAGGGTCTGTAGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033035.13 ENSMUST00000131933.8 ENSMUST00000167299.9 |
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| CDS GCA 90 bp | GATCACAGCGGCCAGACCTCCTGCAACAGTGTACAGAGCTGTGATTaGCAGCAGCCCTACTATGGCCAGGTACAGATCCAGATGCAAGGA | + |
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Preference number: 5 (lower is better) Translates to: DHSGQTSCNSVQSCD*QQPYYGQVQIQMQG Trigger: TCCTTGCATCTGGATCTGTACCTGGCCATAGTAGGGCTGCTGGCAATCACAGCTCTGTACACTGTTGCAGGAGGTCTGGCCGCTGTGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033035.13 ENSMUST00000131933.8 ENSMUST00000167299.9 |
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| CDS CCA 90 bp | ACAGACCCTCTGGCAGATGTCAGGATGCGCACAGGCTACTTGATCTaGGAAGAGGACTCTGCTGACCATCCCAGGGAACACCATCAGGAA | + |
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Preference number: 5 (lower is better) Translates to: TDPLADVRMRTGYLI*EEDSADHPREHHQE Trigger: TTCCTGATGGTGTTCCCTGGGATGGTCAGCAGAGTCCTCTTCCCAGATCAAGTAGCCTGTGCGCATCCTGACATCTGCCAGAGGGTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033035.13 ENSMUST00000131933.8 ENSMUST00000167299.9 |
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| CDS CCA 90 bp | CAGAATCATGGAGAAGTAGAGGTAGTGGACATCCTTCACCACAGCTaGCCGGTCATCAGGCTGGTCACACCGAGGCTGCGCGTAGACAAA | + |
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Preference number: 5 (lower is better) Translates to: QNHGEVEVVDILHHS*PVIRLVTPRLRVDK Trigger: TTTGTCTACGCGCAGCCTCGGTGTGACCAGCCTGATGACCGGCCAGCTGTGGTGAAGGATGTCCACTACCTCTACTTCTCCATGATTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033035.13 ENSMUST00000167299.9 |
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| CDS GCA 90 bp | TTTTCCATCCCACAGAGCCACAGGATAGCCCTCACCACCTTGGAATaGCTGGGAGACACACCATCGCCACAGGCTTTGGTCGTACTTTCT | + |
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Preference number: 5 (lower is better) Translates to: FSIPQSHRIALTTLE*LGDTPSPQALVVLS Trigger: AGAAAGTACGACCAAAGCCTGTGGCGATGGTGTGTCTCCCAGGCATTCCAAGGTGGTGAGGGCTATCCTGTGGCTCTGTGGGATGGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033035.13 ENSMUST00000167299.9 |
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| CDS TCA 90 bp | AGCAGCCCTACTATGGCCAGGTACAGATCCAGATGCAAGGACTGCTaGATGAAGATGGCCCCTGCATACATGTCGACCGAGATCTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: SSPTMARYRSRCKDC*MKMAPAYMSTEILV Trigger: CACCAAGATCTCGGTCGACATGTATGCAGGGGCCATCTTCATTCAGCAGTCCTTGCATCTGGATCTGTACCTGGCCATAGTAGGGCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033035.13 ENSMUST00000131933.8 ENSMUST00000167299.9 |
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| CDS CCA 90 bp | GGTACGCTTCCAGAAACATCCCATGATGAAGACCATGGCCACAGGTaGCTGCAGGTAGGAGCTGATGGATTGAATGTAGATGAAAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: GTLPETSHDEDHGHR*LQVGADGLNVDEKL Trigger: CAGCTTTTCATCTACATTCAATCCATCAGCTCCTACCTGCAGCCACCTGTGGCCATGGTCTTCATCATGGGATGTTTCTGGAAGCGTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033035.13 ENSMUST00000167299.9 |
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| CDS TCA 72 bp | ACCGAGGCTGCGCGTAGACAAAGTCCAGGATCAGCCTaGCCAGTCCCAGCAGCAAGCCCAAGATCAGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: TEAARRQSPGSA*PVPAASPRSGL Trigger: CAGGCCTGATCTTGGGCTTGCTGCTGGGACTGGTCAGGCTGATCCTGGACTTTGTCTACGCGCAGCCTCGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033035.13 ENSMUST00000167299.9 |
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| CDS CCA 72 bp | ACTAGGACAGCGATGTCTGCAGGCTCCATGCTCTTCTaGGGAAAGGCCTCCAGGGAGTCAGACTGTGGGGGC | + |
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Preference number: 6 (lower is better) Translates to: TRTAMSAGSMLF*GKASRESDCGG Trigger: GCCCCCACAGTCTGACTCCCTGGAGGCCTTTCCCCAGAAGAGCATGGAGCCTGCAGACATCGCTGTCCTAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000033035.13 ENSMUST00000127655.8 ENSMUST00000131461.3 ENSMUST00000131933.8 ENSMUST00000167299.9 |
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| CDS CCA 72 bp | GGAGAAGTAGAGGTAGTGGACATCCTTCACCACAGCTaGCCGGTCATCAGGCTGGTCACACCGAGGCTGCGC | + |
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Preference number: 6 (lower is better) Translates to: GEVEVVDILHHS*PVIRLVTPRLR Trigger: GCGCAGCCTCGGTGTGACCAGCCTGATGACCGGCCAGCTGTGGTGAAGGATGTCCACTACCTCTACTTCTCC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033035.13 ENSMUST00000167299.9 |
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| CDS GCA 72 bp | CCACAGAGCCACAGGATAGCCCTCACCACCTTGGAATaGCTGGGAGACACACCATCGCCACAGGCTTTGGTC | + |
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Preference number: 6 (lower is better) Translates to: PQSHRIALTTLE*LGDTPSPQALV Trigger: GACCAAAGCCTGTGGCGATGGTGTGTCTCCCAGGCATTCCAAGGTGGTGAGGGCTATCCTGTGGCTCTGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033035.13 ENSMUST00000167299.9 |
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| CDS CAA 72 bp | TCCATCCCACAGAGCCACAGGATAGCCCTCACCACCTaGGAATGCCTGGGAGACACACCATCGCCACAGGCT | + |
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Preference number: 6 (lower is better) Translates to: SIPQSHRIALTT*ECLGDTPSPQA Trigger: AGCCTGTGGCGATGGTGTGTCTCCCAGGCATTCCAAGGTGGTGAGGGCTATCCTGTGGCTCTGTGGGATGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033035.13 ENSMUST00000167299.9 |
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| CDS TCA 72 bp | ACCCTCTGGCAGATGTCAGGATGCGCACAGGCTACTTaGTCTGGGAAGAGGACTCTGCTGACCATCCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: TLWQMSGCAQAT*SGKRTLLTIPG Trigger: CCCTGGGATGGTCAGCAGAGTCCTCTTCCCAGATCAAGTAGCCTGTGCGCATCCTGACATCTGCCAGAGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033035.13 ENSMUST00000131933.8 ENSMUST00000167299.9 |
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| CDS TCA 72 bp | GACACACCATCGCCACAGGCTTTGGTCGTACTTTCTTaGACTGTCTCCAGCTGGATGCTGGTGCCAGGGGCC | + |
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Preference number: 6 (lower is better) Translates to: DTPSPQALVVLS*TVSSWMLVPGA Trigger: GGCCCCTGGCACCAGCATCCAGCTGGAGACAGTTCAAGAAAGTACGACCAAAGCCTGTGGCGATGGTGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033035.13 ENSMUST00000167299.9 |
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| CDS GCA 72 bp | GTTTGGGGTACGCGATGTCTGAACAGCCAGAGGGGTTaGTACAGACCCTCTGGCAGATGTCAGGATGCGCAC | + |
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Preference number: 6 (lower is better) Translates to: VWGTRCLNSQRG*YRPSGRCQDAH Trigger: GTGCGCATCCTGACATCTGCCAGAGGGTCTGTAGCAACCCCTCTGGCTGTTCAGACATCGCGTACCCCAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033035.13 ENSMUST00000131933.8 ENSMUST00000167299.9 |
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| CDS CCA 72 bp | CACGGAGTCCTGTGGGCAGAAGTTCCAGCACAAGTTTaGGGTACGCGATGTCTGAACAGCCAGAGGGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: HGVLWAEVPAQV*GTRCLNSQRGC Trigger: GCAACCCCTCTGGCTGTTCAGACATCGCGTACCCCAAACTTGTGCTGGAACTTCTGCCCACAGGACTCCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033035.13 ENSMUST00000131933.8 ENSMUST00000167299.9 |
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| CDS CCA 72 bp | CTCCCTGGCTGGCCTGCACAATGGGGATCCAGAGGATaGAGACCAGCACCAGGGCAAACACAAATATCCTGC | + |
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Preference number: 6 (lower is better) Translates to: LPGWPAQWGSRG*RPAPGQTQISC Trigger: GCAGGATATTTGTGTTTGCCCTGGTGCTGGTCTCCATCCTCTGGATCCCCATTGTGCAGGCCAGCCAGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033035.13 ENSMUST00000167299.9 |
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| CDS CAA 72 bp | CCACGGAGTCCTGTGGGCAGAAGTTCCAGCACAAGTTaGGGGTACGCGATGTCTGAACAGCCAGAGGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: PRSPVGRSSSTS*GYAMSEQPEGL Trigger: CAACCCCTCTGGCTGTTCAGACATCGCGTACCCCAAACTTGTGCTGGAACTTCTGCCCACAGGACTCCGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033035.13 ENSMUST00000131933.8 ENSMUST00000167299.9 |
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| CDS CAA 90 bp | TCCAGCACAAGTTTGGGGTACGCGATGTCTGAACAGCCAGAGGGGTaGCTACAGACCCTCTGGCAGATGTCAGGATGCGCACAGGCTACT | + |
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Preference number: 6 (lower is better) Translates to: SSTSLGYAMSEQPEG*LQTLWQMSGCAQAT Trigger: AGTAGCCTGTGCGCATCCTGACATCTGCCAGAGGGTCTGTAGCAACCCCTCTGGCTGTTCAGACATCGCGTACCCCAAACTTGTGCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033035.13 ENSMUST00000131933.8 ENSMUST00000167299.9 |
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| CDS CAA 90 bp | ATGCCTGGGAGACACACCATCGCCACAGGCTTTGGTCGTACTTTCTaGAACTGTCTCCAGCTGGATGCTGGTGCCAGGGGCCTCTGTAGT | + |
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Preference number: 6 (lower is better) Translates to: MPGRHTIATGFGRTF*NCLQLDAGARGLCS Trigger: ACTACAGAGGCCCCTGGCACCAGCATCCAGCTGGAGACAGTTCAAGAAAGTACGACCAAAGCCTGTGGCGATGGTGTGTCTCCCAGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033035.13 ENSMUST00000167299.9 |
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| CDS TCA 72 bp | CAGCGGCCAGACCTCCTGCAACAGTGTACAGAGCTGTaGTTGCCAGCAGCCCTACTATGGCCAGGTACAGAT | + |
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Preference number: 6 (lower is better) Translates to: QRPDLLQQCTEL*LPAALLWPGTD Trigger: ATCTGTACCTGGCCATAGTAGGGCTGCTGGCAATCACAGCTCTGTACACTGTTGCAGGAGGTCTGGCCGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033035.13 ENSMUST00000131933.8 ENSMUST00000167299.9 |
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| CDS GCA 72 bp | GGCCAGACCTCCTGCAACAGTGTACAGAGCTGTGATTaGCAGCAGCCCTACTATGGCCAGGTACAGATCCAG | + |
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Preference number: 6 (lower is better) Translates to: GQTSCNSVQSCD*QQPYYGQVQIQ Trigger: CTGGATCTGTACCTGGCCATAGTAGGGCTGCTGGCAATCACAGCTCTGTACACTGTTGCAGGAGGTCTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033035.13 ENSMUST00000131933.8 ENSMUST00000167299.9 |
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| CDS CCA 72 bp | CTGGCAGATGTCAGGATGCGCACAGGCTACTTGATCTaGGAAGAGGACTCTGCTGACCATCCCAGGGAACAC | + |
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Preference number: 6 (lower is better) Translates to: LADVRMRTGYLI*EEDSADHPREH Trigger: GTGTTCCCTGGGATGGTCAGCAGAGTCCTCTTCCCAGATCAAGTAGCCTGTGCGCATCCTGACATCTGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033035.13 ENSMUST00000131933.8 ENSMUST00000167299.9 |
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| CDS CCA 72 bp | CCTGCCCACAATCATGAGCTCCCTTTCAGATGCCCGTaGCCGGATGTGGTTCCACAGGTCCATGGTGAAGAT | + |
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Preference number: 6 (lower is better) Translates to: PAHNHELPFRCP*PDVVPQVHGED Trigger: ATCTTCACCATGGACCTGTGGAACCACATCCGGCCACGGGCATCTGAAAGGGAGCTCATGATTGTGGGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033035.13 ENSMUST00000167299.9 |
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| CDS CAA 72 bp | AGACACACCATCGCCACAGGCTTTGGTCGTACTTTCTaGAACTGTCTCCAGCTGGATGCTGGTGCCAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: RHTIATGFGRTF*NCLQLDAGARG Trigger: GCCCCTGGCACCAGCATCCAGCTGGAGACAGTTCAAGAAAGTACGACCAAAGCCTGTGGCGATGGTGTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033035.13 ENSMUST00000167299.9 |
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| CDS CAA 90 bp | GTTGCTACAGACCCTCTGGCAGATGTCAGGATGCGCACAGGCTACTaGATCTGGGAAGAGGACTCTGCTGACCATCCCAGGGAACACCAT | + |
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Preference number: 6 (lower is better) Translates to: VATDPLADVRMRTGY*IWEEDSADHPREHH Trigger: ATGGTGTTCCCTGGGATGGTCAGCAGAGTCCTCTTCCCAGATCAAGTAGCCTGTGCGCATCCTGACATCTGCCAGAGGGTCTGTAGCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033035.13 ENSMUST00000131933.8 ENSMUST00000167299.9 |
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| CDS TCA 72 bp | CAGAAGTTCCAGCACAAGTTTGGGGTACGCGATGTCTaGACAGCCAGAGGGGTTGCTACAGACCCTCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: QKFQHKFGVRDV*TARGVATDPLA Trigger: TGCCAGAGGGTCTGTAGCAACCCCTCTGGCTGTTCAGACATCGCGTACCCCAAACTTGTGCTGGAACTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033035.13 ENSMUST00000131933.8 ENSMUST00000167299.9 |
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| CDS TCA 72 bp | CCTGACCAGTCCCAGCAGCAAGCCCAAGATCAGGCCTaGGAAGGCACCCTTTTCATTGGTACGCTTCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: PDQSQQQAQDQA*EGTLFIGTLPE Trigger: TTCTGGAAGCGTACCAATGAAAAGGGTGCCTTCTCAGGCCTGATCTTGGGCTTGCTGCTGGGACTGGTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033035.13 ENSMUST00000167299.9 |
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| CDS GCA 72 bp | CAGAGCATCTGTATAGATCACAGCGGCCAGACCTCCTaGAACAGTGTACAGAGCTGTGATTGCCAGCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: QSICIDHSGQTS*NSVQSCDCQQP Trigger: GGGCTGCTGGCAATCACAGCTCTGTACACTGTTGCAGGAGGTCTGGCCGCTGTGATCTATACAGATGCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033035.13 ENSMUST00000131933.8 ENSMUST00000167299.9 |
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| CDS CCA 72 bp | CAGGGGAGATCAGATGTCAATGGATCTCGGAAGATGTaGAAGGCATCTTCTCGGGGTAGCCCACAGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: QGRSDVNGSRKM*KASSRGSPQLL Trigger: CAGCAGCTGTGGGCTACCCCGAGAAGATGCCTTCCACATCTTCCGAGATCCATTGACATCTGATCTCCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033035.13 ENSMUST00000131933.8 ENSMUST00000167299.9 |
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| CDS CAA 90 bp | TTGTTCTTTTCCATCCCACAGAGCCACAGGATAGCCCTCACCACCTaGGAATGCCTGGGAGACACACCATCGCCACAGGCTTTGGTCGTA | + |
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Preference number: 6 (lower is better) Translates to: LFFSIPQSHRIALTT*ECLGDTPSPQALVV Trigger: TACGACCAAAGCCTGTGGCGATGGTGTGTCTCCCAGGCATTCCAAGGTGGTGAGGGCTATCCTGTGGCTCTGTGGGATGGAAAAGAACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033035.13 ENSMUST00000167299.9 |
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| CDS TCA 72 bp | TGGCCAGGTACAGATCCAGATGCAAGGACTGCTGAATaGAGATGGCCCCTGCATACATGTCGACCGAGATCT | + |
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Preference number: 6 (lower is better) Translates to: WPGTDPDARTAE*RWPLHTCRPRS Trigger: AGATCTCGGTCGACATGTATGCAGGGGCCATCTTCATTCAGCAGTCCTTGCATCTGGATCTGTACCTGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033035.13 ENSMUST00000131933.8 ENSMUST00000167299.9 |
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| CDS GCA 72 bp | GATCTGTACACCAATACCAGAGAGATGGGATGGACATaGCAAACAGGATCCCAGGCCAGGGGAGATCAGATG | + |
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Preference number: 6 (lower is better) Translates to: DLYTNTREMGWT*QTGSQARGDQM Trigger: CATCTGATCTCCCCTGGCCTGGGATCCTGTTTGGCATGTCCATCCCATCTCTCTGGTATTGGTGTACAGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033035.13 ENSMUST00000131933.8 ENSMUST00000167299.9 |
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| CDS CCA 72 bp | TCACCTGATCTGTACACCAATACCAGAGAGATGGGATaGACATGCCAAACAGGATCCCAGGCCAGGGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: SPDLYTNTREMG*TCQTGSQARGD Trigger: ATCTCCCCTGGCCTGGGATCCTGTTTGGCATGTCCATCCCATCTCTCTGGTATTGGTGTACAGATCAGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033035.13 ENSMUST00000131933.8 ENSMUST00000167299.9 |
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| CDS CCA 72 bp | AACAATCACCTGATCTGTACACCAATACCAGAGAGATaGGATGGACATGCCAAACAGGATCCCAGGCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: NNHLICTPIPER*DGHAKQDPRPG Trigger: CCCTGGCCTGGGATCCTGTTTGGCATGTCCATCCCATCTCTCTGGTATTGGTGTACAGATCAGGTGATTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033035.13 ENSMUST00000131933.8 ENSMUST00000167299.9 |
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| CDS CCA 72 bp | CCAGAAACATCCCATGATGAAGACCATGGCCACAGGTaGCTGCAGGTAGGAGCTGATGGATTGAATGTAGAT | + |
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Preference number: 6 (lower is better) Translates to: PETSHDEDHGHR*LQVGADGLNVD Trigger: ATCTACATTCAATCCATCAGCTCCTACCTGCAGCCACCTGTGGCCATGGTCTTCATCATGGGATGTTTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033035.13 ENSMUST00000167299.9 |
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| CDS CCA 72 bp | TTCCTCCAAGGAAACTATGACAGGTTCCGCTTTGCTTaGGGGCTCCTCTTTGTTCTTTTCCATCCCACAGAG | + |
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Preference number: 6 (lower is better) Translates to: FLQGNYDRFRFA*GLLFVLFHPTE Trigger: CTCTGTGGGATGGAAAAGAACAAAGAGGAGCCCCCAAGCAAAGCGGAACCTGTCATAGTTTCCTTGGAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033035.13 ENSMUST00000167299.9 |
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| CDS CAA 72 bp | CAAAGGAAGATGGCGCAGCTGATGCACACAATGCAGTaGACGTCAAGCAGGGTTTTCACCAAGGGATTTTCC | + |
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Preference number: 6 (lower is better) Translates to: QRKMAQLMHTMQ*TSSRVFTKGFS Trigger: GGAAAATCCCTTGGTGAAAACCCTGCTTGACGTCAACTGCATTGTGTGCATCAGCTGCGCCATCTTCCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033035.13 ENSMUST00000167299.9 |
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| CDS GCA 72 bp | ATCCAGATGCAAGGACTGCTGAATGAAGATGGCCCCTaGATACATGTCGACCGAGATCTTGGTGAAGATGTA | + |
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Preference number: 6 (lower is better) Translates to: IQMQGLLNEDGP*IHVDRDLGEDV Trigger: TACATCTTCACCAAGATCTCGGTCGACATGTATGCAGGGGCCATCTTCATTCAGCAGTCCTTGCATCTGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033035.13 ENSMUST00000131933.8 ENSMUST00000167299.9 |
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