Pregenerated sensors for SLC52A3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027463Ensembl transcript IDs: ENSMUST00000073228.12, ENSMUST00000109858.2, ENSMUST00000109859.9, ENSMUST00000109861.8
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCAGAGGGCTGTACTGGGACCCAGGACCAACAACAGGCTTGGGATaGAGAAAAGGAATGGAGGCGGGGTCCCTCCCAAGTCCTCCGATC | + |
|
Preference number: 1 (lower is better) Translates to: GRGLYWDPGPTTGLG*RKGMEAGSLPSPPI Trigger: GATCGGAGGACTTGGGAGGGACCCCGCCTCCATTCCTTTTCTGCATCCCAAGCCTGTTGTTGGTCCTGGGTCCCAGTACAGCCCTCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR CCA 90 bp | TTCTGGCTTTTACCTTCACCGATGGGGGTACCTGGTGTCCTGAGGTaGCCAAGTGAGCCTACACGGAGCAGTCCAGGCTGCAGTAGTCGG | + |
|
Preference number: 1 (lower is better) Translates to: FWLLPSPMGVPGVLR*PSEPTRSSPGCSSR Trigger: CCGACTACTGCAGCCTGGACTGCTCCGTGTAGGCTCACTTGGCCACCTCAGGACACCAGGTACCCCCATCGGTGAAGGTAAAAGCCAGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109858.2 ENSMUST00000109859.9 |
||
| 3UTR GCA 90 bp | CAGAGAACAAAGTCTGCAACTGGGGCTCATAAGCAACGGGCACTGTaGTGGAGGAGGGGCTGCACAGTGCAACTCCAGGTTGGAAGGAGG | + |
|
Preference number: 1 (lower is better) Translates to: QRTKSATGAHKQRAL*WRRGCTVQLQVGRR Trigger: CCTCCTTCCAACCTGGAGTTGCACTGTGCAGCCCCTCCTCCAGCACAGTGCCCGTTGCTTATGAGCCCCAGTTGCAGACTTTGTTCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR GCA 90 bp | GAGGTCCGCACTGTCCACTGTGTGTCCTGGTGGGGTTCACTCAGATaGACGCAGGACCCCCTTCAACTCATCTCAGGGTCTCACCATTCT | + |
|
Preference number: 1 (lower is better) Translates to: EVRTVHCVSWWGSLR*TQDPLQLISGSHHS Trigger: AGAATGGTGAGACCCTGAGATGAGTTGAAGGGGGTCCTGCGTGCATCTGAGTGAACCCCACCAGGACACACAGTGGACAGTGCGGACCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR CCA 90 bp | CAGGGTCTCACCATTCTGGGAGACAGGGAAGGCAGAGGGCTGTACTaGGACCCAGGACCAACAACAGGCTTGGGATGCAGAAAAGGAATG | + |
|
Preference number: 1 (lower is better) Translates to: QGLTILGDREGRGLY*DPGPTTGLGCRKGM Trigger: CATTCCTTTTCTGCATCCCAAGCCTGTTGTTGGTCCTGGGTCCCAGTACAGCCCTCTGCCTTCCCTGTCTCCCAGAATGGTGAGACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR TCA 90 bp | CAAGTGAGCCTACACGGAGCAGTCCAGGCTGCAGTAGTCGGCAGATaGGAAGAGTTTCAGTACATTAACCAGTGGGAACATGAGCAGGGC | + |
|
Preference number: 1 (lower is better) Translates to: QVSLHGAVQAAVVGR*EEFQYINQWEHEQG Trigger: GCCCTGCTCATGTTCCCACTGGTTAATGTACTGAAACTCTTCTCATCTGCCGACTACTGCAGCCTGGACTGCTCCGTGTAGGCTCACTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109858.2 ENSMUST00000109859.9 |
||
| 3UTR GCA 90 bp | GAGGCAGCTAAACCTCCCAGGAGTCTTCCCCTAACATCCTTAGGCTaGCTCCAACTGAATGCTACAAACGGATCTCTCCGAAGACAGAGA | + |
|
Preference number: 1 (lower is better) Translates to: EAAKPPRSLPLTSLG*LQLNATNGSLRRQR Trigger: TCTCTGTCTTCGGAGAGATCCGTTTGTAGCATTCAGTTGGAGGCAGCCTAAGGATGTTAGGGGAAGACTCCTGGGAGGTTTAGCTGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR GCA 90 bp | AAGAAGGGTGTCCATGCAGGACAGGGTCTAGGAGAACCTGATAGATaGCTAAGCCTACAAGCGAAAGGCTGTTTACTATACCCCTCCTTT | + |
|
Preference number: 1 (lower is better) Translates to: KKGVHAGQGLGEPDR*LSLQAKGCLLYPSF Trigger: AAAGGAGGGGTATAGTAAACAGCCTTTCGCTTGTAGGCTTAGGCATCTATCAGGTTCTCCTAGACCCTGTCCTGCATGGACACCCTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR TCA 90 bp | CTTCCTTGGTTCTCGACCTTGACTGAAAATGGATTAGAATTAGGCTaGTACAGTGTAGCCCTCACCAGGCTTCTTGTGTGTACACAGCCC | + |
|
Preference number: 1 (lower is better) Translates to: LPWFSTLTENGLELG*YSVALTRLLVCTQP Trigger: GGGCTGTGTACACACAAGAAGCCTGGTGAGGGCTACACTGTATCAGCCTAATTCTAATCCATTTTCAGTCAAGGTCGAGAACCAAGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR TCA 90 bp | ATCAGGCCTCTCTCTGCTCTTGCTTCCTTGGTTCTCGACCTTGACTaGAAATGGATTAGAATTAGGCTGATACAGTGTAGCCCTCACCAG | + |
|
Preference number: 1 (lower is better) Translates to: IRPLSALASLVLDLD*KWIRIRLIQCSPHQ Trigger: CTGGTGAGGGCTACACTGTATCAGCCTAATTCTAATCCATTTTCAGTCAAGGTCGAGAACCAAGGAAGCAAGAGCAGAGAGAGGCCTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTTCACCGATGGGGGTACCTGGTGTCCTGAGGTGGCCAAGTGAGCCTACACGGGCCCAGCTGCACCGCTaGCCCACACCACAAGAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: PSPMGVPGVLRWPSEPTRAQLHR*PTPQEG Trigger: GCCCTCTTGTGGTGTGGGGCAGCGGTGCAGCTGGGC...CCGTGTAGGCTCACTTGGCCACCTCAGGACACCAGGTACCCCCATCGGTGAAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109858.2 ENSMUST00000109859.9 |
||
| 3UTR-3UTR GCA 90 bp | CTCATCCTGCCTGAGCTACCCCTTTTGAGGTCCGCACTGTCCACTGTGTGTCCTGCCCAGCTGCACCGCTaGCCCACACCACAAGAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: LILPELPLLRSALSTVCPAQLHR*PTPQEG Trigger: GCCCTCTTGTGGTGTGGGGCAGCGGTGCAGCTGGGC...AGGACACACAGTGGACAGTGCGGACCTCAAAAGGGGTAGCTCAGGCAGGATGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109858.2 ENSMUST00000109859.9 |
||
| 3UTR-3UTR GCA 90 bp | GGAAGGCAGAGGGCTGTACTGGGACCCAGGACCAACAACAGGCTTGGGATGCAGATCAGAGAGCCCAGCTaGACCGCTGCCCCACACCAC | + |
|
Preference number: 2 (lower is better) Translates to: GRQRAVLGPRTNNRLGMQIREPS*TAAPHH Trigger: GTGGTGTGGGGCAGCGGTGCAGCTGGGCTCTCTGAT...CTGCATCCCAAGCCTGTTGTTGGTCCTGGGTCCCAGTACAGCCCTCTGCCTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109858.2 ENSMUST00000109859.9 |
||
| 3UTR-3UTR GCA 90 bp | GCTGGAGGAGGGGCTGCACAGTGCAACTCCAGGTTGGAAGGAGGCCTTTGTGTTATCAGAGAGCCCAGCTaGACCGCTGCCCCACACCAC | + |
|
Preference number: 2 (lower is better) Translates to: AGGGAAQCNSRLEGGLCVIREPS*TAAPHH Trigger: GTGGTGTGGGGCAGCGGTGCAGCTGGGCTCTCTGAT...AACACAAAGGCCTCCTTCCAACCTGGAGTTGCACTGTGCAGCCCCTCCTCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109858.2 ENSMUST00000109859.9 |
||
| 3UTR CAA 90 bp | AGGGAAGGCAGAGGGCTGTACTGGGACCCAGGACCAACAACAGGCTaGGGATGCAGAAAAGGAATGGAGGCGGGGTCCCTCCCAAGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: REGRGLYWDPGPTTG*GCRKGMEAGSLPSP Trigger: AGGACTTGGGAGGGACCCCGCCTCCATTCCTTTTCTGCATCCCAAGCCTGTTGTTGGTCCTGGGTCCCAGTACAGCCCTCTGCCTTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCAGGCCTGGCCTAACAGCTCCCCAGACCCCGATCTATGACCATGCAAGGTTGAAGCAACGGGCACTGTaGTGGAGGAGGGGCTGCACA | + |
|
Preference number: 2 (lower is better) Translates to: LRPGLTAPQTPIYDHARLKQRAL*WRRGCT Trigger: TGTGCAGCCCCTCCTCCAGCACAGTGCCCGTTGCTT...CAACCTTGCATGGTCATAGATCGGGGTCTGGGGAGCTGTTAGGCCAGGCCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGGGTTCACTCAGATGCACGCAGGACCCCCTTCAACTCATCTCAGGGTCTCACCAACGGGCACTGTGCTaGAGGAGGGGCTGCACAGTG | + |
|
Preference number: 2 (lower is better) Translates to: WGSLRCTQDPLQLISGSHQRALC*RRGCTV Trigger: CACTGTGCAGCCCCTCCTCCAGCACAGTGCCCGTTG...GTGAGACCCTGAGATGAGTTGAAGGGGGTCCTGCGTGCATCTGAGTGAACCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGGGTTCACTCAGATGCACGCAGGACCCCCTTCAACTCATCTCAGGGTCTCACAAGCAACGGGCACTGTaGTGGAGGAGGGGCTGCACA | + |
|
Preference number: 2 (lower is better) Translates to: WGSLRCTQDPLQLISGSHKQRAL*WRRGCT Trigger: TGTGCAGCCCCTCCTCCAGCACAGTGCCCGTTGCTT...GTGAGACCCTGAGATGAGTTGAAGGGGGTCCTGCGTGCATCTGAGTGAACCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGTGGGGTTCACTCAGATGCACGCAGGACCCCCTTCAACTCATCTCAGGGTCTCCTGGTGTCCTGAGGTaGCCAAGTGAGCCTACACGG | + |
|
Preference number: 2 (lower is better) Translates to: WWGSLRCTQDPLQLISGSPGVLR*PSEPTR Trigger: CCGTGTAGGCTCACTTGGCCACCTCAGGACACCAGG...AGACCCTGAGATGAGTTGAAGGGGGTCCTGCGTGCATCTGAGTGAACCCCACCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109858.2 ENSMUST00000109859.9 |
||
| 3UTR-3UTR TCA 90 bp | TGGGCATCAGGCCTCTCTCTGCTCTTGCTTCCTTGGTTCTCGACCTTGACTGAACCTGAGGTGGCCAAGTaGGCCTACACGGAGCAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: WASGLSLLLLPWFSTLTEPEVAK*AYTEQS Trigger: GGACTGCTCCGTGTAGGCTCACTTGGCCACCTCAGG...TTCAGTCAAGGTCGAGAACCAAGGAAGCAAGAGCAGAGAGAGGCCTGATGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109858.2 ENSMUST00000109859.9 |
||
| 3UTR-3UTR GCA 90 bp | TGGTGGGGTTCACTCAGATGCACGCAGGACCCCCTTCAACTCATCTCAGGGTCTGGAGGGGCTGCACAGTaGAACTCCAGGTTGGAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: WWGSLRCTQDPLQLISGSGGAAQ*NSRLEG Trigger: TCCTTCCAACCTGGAGTTGCACTGTGCAGCCCCTCC...AGACCCTGAGATGAGTTGAAGGGGGTCCTGCGTGCATCTGAGTGAACCCCACCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGGGTTCACTCAGATGCACGCAGGACCCCCTTCAACTCATCTCAGGGTCTCACGGAGGGGCTGCACAGTaGAACTCCAGGTTGGAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: WGSLRCTQDPLQLISGSHGGAAQ*NSRLEG Trigger: TCCTTCCAACCTGGAGTTGCACTGTGCAGCCCCTCC...GTGAGACCCTGAGATGAGTTGAAGGGGGTCCTGCGTGCATCTGAGTGAACCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR CAA 90 bp | AACGGGCACTGTGCTGGAGGAGGGGCTGCACAGTGCAACTCCAGGTaGGAAGGAGGCCTTTGTGTTAAAAAGCTCAGGCCTGGCCTAACA | + |
|
Preference number: 2 (lower is better) Translates to: NGHCAGGGAAQCNSR*EGGLCVKKLRPGLT Trigger: TGTTAGGCCAGGCCTGAGCTTTTTAACACAAAGGCCTCCTTCCAACCTGGAGTTGCACTGTGCAGCCCCTCCTCCAGCACAGTGCCCGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR CCA 90 bp | CACGAAACTTCCCTAAGGTCTCACAGTAAGCAAGAGGCAGCTAAACCTCCCAGGCAACGGGCACTGTGCTaGAGGAGGGGCTGCACAGTG | + |
|
Preference number: 2 (lower is better) Translates to: HETSLRSHSKQEAAKPPRQRALC*RRGCTV Trigger: CACTGTGCAGCCCCTCCTCCAGCACAGTGCCCGTTG...CCTGGGAGGTTTAGCTGCCTCTTGCTTACTGTGAGACCTTAGGGAAGTTTCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGGGTTCACTCAGATGCACGCAGGACCCCCTTCAACTCATCTCAGGGTCTCACGATGCAGAAAAGGAATaGAGGCGGGGTCCCTCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: WGSLRCTQDPLQLISGSHDAEKE*RRGPSQ Trigger: TTGGGAGGGACCCCGCCTCCATTCCTTTTCTGCATC...GTGAGACCCTGAGATGAGTTGAAGGGGGTCCTGCGTGCATCTGAGTGAACCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR TCA 90 bp | GGAAGGCAGAGGGCTGTACTGGGACCCAGGACCAACAACAGGCTTGGGATGCAGTGTGGAGGATGGGGATaGAAAATGGAGCAAAGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: GRQRAVLGPRTNNRLGMQCGGWG*KMEQRV Trigger: AACCCTTTGCTCCATTTTTCATCCCCATCCTCCACA...CTGCATCCCAAGCCTGTTGTTGGTCCTGGGTCCCAGTACAGCCCTCTGCCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGGGGTTCACTCAGATGCACGCAGGACCCCCTTCAACTCATCTCAGGGTCTCAGTCGCTGGGCTCTTCTaGCTTTTACCTTCACCGATG | + |
|
Preference number: 2 (lower is better) Translates to: VGFTQMHAGPPSTHLRVSVAGLF*LLPSPM Trigger: CATCGGTGAAGGTAAAAGCCAGAAGAGCCCAGCGAC...TGAGACCCTGAGATGAGTTGAAGGGGGTCCTGCGTGCATCTGAGTGAACCCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCCTGCCTGAGCTACCCCTTTTGAGGTCCGCACTGTCCACTGTGTGTCCTGGTGTCGCTGGGCTCTTCTaGCTTTTACCTTCACCGATG | + |
|
Preference number: 2 (lower is better) Translates to: ILPELPLLRSALSTVCPGVAGLF*LLPSPM Trigger: CATCGGTGAAGGTAAAAGCCAGAAGAGCCCAGCGAC...ACCAGGACACACAGTGGACAGTGCGGACCTCAAAAGGGGTAGCTCAGGCAGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGGGTTCACTCAGATGCACGCAGGACCCCCTTCAACTCATCTCAGGGTCTCACCTGCCTCCAACTGAATaGTACAAACGGATCTCTCCG | + |
|
Preference number: 2 (lower is better) Translates to: WGSLRCTQDPLQLISGSHLPPTE*YKRISP Trigger: CGGAGAGATCCGTTTGTAGCATTCAGTTGGAGGCAG...GTGAGACCCTGAGATGAGTTGAAGGGGGTCCTGCGTGCATCTGAGTGAACCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCTTAGTGTCGCTGGGCTCTTCTGGCTTTTACCTTCACCGATGGGGGTACCTGGTCGCTGGGCTCTTCTaGCTTTTACCTTCACCGATG | + |
|
Preference number: 2 (lower is better) Translates to: SLVSLGSSGFYLHRWGYLVAGLF*LLPSPM Trigger: CATCGGTGAAGGTAAAAGCCAGAAGAGCCCAGCGAC...CAGGTACCCCCATCGGTGAAGGTAAAAGCCAGAAGAGCCCAGCGACACTAAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGAATGGAGGCGGGGTCCCTCCCAAGTCCTCCGATCACTTCCAGGTTGTATTAATGACCATGCAAGGTTaGAGTGGGGGTGTGGAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: RNGGGVPPKSSDHFQVVLMTMQG*SGGVED Trigger: ATCCTCCACACCCCCACTCCAACCTTGCATGGTCAT...TAATACAACCTGGAAGTGATCGGAGGACTTGGGAGGGACCCCGCCTCCATTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGTGGGGTTCACTCAGATGCACGCAGGACCCCCTTCAACTCATCTCAGGGTCTCAGTACATTAACCAGTaGGAACATGAGCAGGGCACC | + |
|
Preference number: 2 (lower is better) Translates to: WWGSLRCTQDPLQLISGSQYINQ*EHEQGT Trigger: GGTGCCCTGCTCATGTTCCCACTGGTTAATGTACTG...AGACCCTGAGATGAGTTGAAGGGGGTCCTGCGTGCATCTGAGTGAACCCCACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109858.2 ENSMUST00000109859.9 |
||
| 3UTR-3UTR TCA 90 bp | CTCATCCTGCCTGAGCTACCCCTTTTGAGGTCCGCACTGTCCACTGTGTGTCCTTGTGGAGGATGGGGATaGAAAATGGAGCAAAGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: LILPELPLLRSALSTVCPCGGWG*KMEQRV Trigger: AACCCTTTGCTCCATTTTTCATCCCCATCCTCCACA...AGGACACACAGTGGACAGTGCGGACCTCAAAAGGGGTAGCTCAGGCAGGATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGGAGGATGGGGATGAAAAATGGAGCAAAGGGTTGTTATCCTTAGTGTCGCTGGGGTACCTGGTGTCCTaGGGTGGCCAAGTGAGCCTA | + |
|
Preference number: 2 (lower is better) Translates to: VEDGDEKWSKGLLSLVSLGYLVS*GGQVSL Trigger: TAGGCTCACTTGGCCACCTCAGGACACCAGGTACCC...CAGCGACACTAAGGATAACAACCCTTTGCTCCATTTTTCATCCCCATCCTCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109858.2 ENSMUST00000109859.9 |
||
| 3UTR-3UTR CCA 90 bp | AACAGAGGCCTAGAGAATCACGAAACTTCCCTAAGGTCTCACAGTAAGCAAGAGCAACGGGCACTGTGCTaGAGGAGGGGCTGCACAGTG | + |
|
Preference number: 2 (lower is better) Translates to: NRGLENHETSLRSHSKQEQRALC*RRGCTV Trigger: CACTGTGCAGCCCCTCCTCCAGCACAGTGCCCGTTG...CTCTTGCTTACTGTGAGACCTTAGGGAAGTTTCGTGATTCTCTAGGCCTCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGAATGGAGGCGGGGTCCCTCCCAAGTCCTCCGATCACTTCCAGGTTGTATTACAGTACATTAACCAGTaGGAACATGAGCAGGGCACC | + |
|
Preference number: 2 (lower is better) Translates to: RNGGGVPPKSSDHFQVVLQYINQ*EHEQGT Trigger: GGTGCCCTGCTCATGTTCCCACTGGTTAATGTACTG...TAATACAACCTGGAAGTGATCGGAGGACTTGGGAGGGACCCCGCCTCCATTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109858.2 ENSMUST00000109859.9 |
||
| 3UTR-3UTR CCA 90 bp | TGCAACTCCAGGTTGGAAGGAGGCCTTTGTGTTAAAAAGCTCAGGCCTGGCCTAATGACCATGCAAGGTTaGAGTGGGGGTGTGGAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: CNSRLEGGLCVKKLRPGLMTMQG*SGGVED Trigger: ATCCTCCACACCCCCACTCCAACCTTGCATGGTCAT...TAGGCCAGGCCTGAGCTTTTTAACACAAAGGCCTCCTTCCAACCTGGAGTTGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGAATGGAGGCGGGGTCCCTCCCAAGTCCTCCGATCACTTCCAGGTTGTATTAAGTGCAACTCCAGGTTaGAAGGAGGCCTTTGTGTTA | + |
|
Preference number: 2 (lower is better) Translates to: RNGGGVPPKSSDHFQVVLSATPG*KEAFVL Trigger: TAACACAAAGGCCTCCTTCCAACCTGGAGTTGCACT...TAATACAACCTGGAAGTGATCGGAGGACTTGGGAGGGACCCCGCCTCCATTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGGCATCAGGCCTCTCTCTGCTCTTGCTTCCTTGGTTCTCGACCTTGACTGAAAGTGCAACTCCAGGTTaGAAGGAGGCCTTTGTGTTA | + |
|
Preference number: 2 (lower is better) Translates to: WASGLSLLLLPWFSTLTESATPG*KEAFVL Trigger: TAACACAAAGGCCTCCTTCCAACCTGGAGTTGCACT...TTCAGTCAAGGTCGAGAACCAAGGAAGCAAGAGCAGAGAGAGGCCTGATGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR CCA 90 bp | ACCCCCTTCAACTCATCTCAGGGTCTCACCATTCTGGGAGACAGGGAAGGCAGAGATGGGGATGAAAAATaGAGCAAAGGGTTGTTATCC | + |
|
Preference number: 2 (lower is better) Translates to: TPFNSSQGLTILGDREGRDGDEK*SKGLLS Trigger: GGATAACAACCCTTTGCTCCATTTTTCATCCCCATC...TCTGCCTTCCCTGTCTCCCAGAATGGTGAGACCCTGAGATGAGTTGAAGGGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR TCA 90 bp | AACAGAGGCCTAGAGAATCACGAAACTTCCCTAAGGTCTCACAGTAAGCAAGAGTGTGGAGGATGGGGATaGAAAATGGAGCAAAGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: NRGLENHETSLRSHSKQECGGWG*KMEQRV Trigger: AACCCTTTGCTCCATTTTTCATCCCCATCCTCCACA...CTCTTGCTTACTGTGAGACCTTAGGGAAGTTTCGTGATTCTCTAGGCCTCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR CCA 90 bp | AACAGAGGCCTAGAGAATCACGAAACTTCCCTAAGGTCTCACAGTAAGCAAGAGAGTGCAACTCCAGGTTaGAAGGAGGCCTTTGTGTTA | + |
|
Preference number: 2 (lower is better) Translates to: NRGLENHETSLRSHSKQESATPG*KEAFVL Trigger: TAACACAAAGGCCTCCTTCCAACCTGGAGTTGCACT...CTCTTGCTTACTGTGAGACCTTAGGGAAGTTTCGTGATTCTCTAGGCCTCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR GCA 90 bp | AACAGAGGCCTAGAGAATCACGAAACTTCCCTAAGGTCTCACAGTAAGCAAGAGCTAACATCCTTAGGCTaGCTCCAACTGAATGCTACA | + |
|
Preference number: 2 (lower is better) Translates to: NRGLENHETSLRSHSKQELTSLG*LQLNAT Trigger: TGTAGCATTCAGTTGGAGGCAGCCTAAGGATGTTAG...CTCTTGCTTACTGTGAGACCTTAGGGAAGTTTCGTGATTCTCTAGGCCTCTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR CCA 90 bp | AACAGAGGCCTAGAGAATCACGAAACTTCCCTAAGGTCTCACAGTAAGCAAGAGGATGGGGATGAAAAATaGAGCAAAGGGTTGTTATCC | + |
|
Preference number: 2 (lower is better) Translates to: NRGLENHETSLRSHSKQEDGDEK*SKGLLS Trigger: GGATAACAACCCTTTGCTCCATTTTTCATCCCCATC...CTCTTGCTTACTGTGAGACCTTAGGGAAGTTTCGTGATTCTCTAGGCCTCTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR GCA 72 bp | GGGAACATGAGCAGGGCACCAATCAGAGAGCCCAGCTaGACCGCTGCCCCACACCACAAGAGGGCACTGCGA | + |
|
Preference number: 3 (lower is better) Translates to: GNMSRAPIREPS*TAAPHHKRALR Trigger: TCGCAGTGCCCTCTTGTGGTGTGGGGCAGCGGTGCAGCTGGGCTCTCTGATTGGTGCCCTGCTCATGTTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109858.2 ENSMUST00000109859.9 |
||
| 3UTR CCA 72 bp | GAGGGCTGTACTGGGACCCAGGACCAACAACAGGCTTaGGATGCAGAAAAGGAATGGAGGCGGGGTCCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: EGCTGTQDQQQA*DAEKEWRRGPS Trigger: GGAGGGACCCCGCCTCCATTCCTTTTCTGCATCCCAAGCCTGTTGTTGGTCCTGGGTCCCAGTACAGCCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR CCA 72 bp | TTACCTTCACCGATGGGGGTACCTGGTGTCCTGAGGTaGCCAAGTGAGCCTACACGGAGCAGTCCAGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LPSPMGVPGVLR*PSEPTRSSPGC Trigger: GCAGCCTGGACTGCTCCGTGTAGGCTCACTTGGCCACCTCAGGACACCAGGTACCCCCATCGGTGAAGGTAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109858.2 ENSMUST00000109859.9 |
||
| 3UTR TCA 72 bp | GGCTTTTACCTTCACCGATGGGGGTACCTGGTGTCCTaGGGTGGCCAAGTGAGCCTACACGGAGCAGTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GFYLHRWGYLVS*GGQVSLHGAVQ Trigger: CTGGACTGCTCCGTGTAGGCTCACTTGGCCACCTCAGGACACCAGGTACCCCCATCGGTGAAGGTAAAAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109858.2 ENSMUST00000109859.9 |
||
| 3UTR GCA 72 bp | GCTCATAAGCAACGGGCACTGTGCTGGAGGAGGGGCTaGACAGTGCAACTCCAGGTTGGAAGGAGGCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: AHKQRALCWRRG*TVQLQVGRRPL Trigger: CAAAGGCCTCCTTCCAACCTGGAGTTGCACTGTGCAGCCCCTCCTCCAGCACAGTGCCCGTTGCTTATGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR CCA 72 bp | TCTGCAACTGGGGCTCATAAGCAACGGGCACTGTGCTaGAGGAGGGGCTGCACAGTGCAACTCCAGGTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SATGAHKQRALC*RRGCTVQLQVG Trigger: TCCAACCTGGAGTTGCACTGTGCAGCCCCTCCTCCAGCACAGTGCCCGTTGCTTATGAGCCCCAGTTGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGAGGAGGGGCTGCACAGTGCAACTCCAGGTTGGAAGGAGGCCTTTGTGTTTATGACCATGCAAGGTaGGAGTGGGGGTGTGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: AGGGAAQCNSRLEGGLCVYDHAR*EWGCGG Trigger: TCCTCCACACCCCCACTCCAACCTTGCATGGTCATA...AACACAAAGGCCTCCTTCCAACCTGGAGTTGCACTGTGCAGCCCCTCCTCCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGTGGGGTTCACTCAGATGCACGCAGGACCCCCTTCAACTCATCTCAGGGTCTCCTGAGCTACCCCTTTaGAGGTCCGCACTGTCCACT | + |
|
Preference number: 3 (lower is better) Translates to: WWGSLRCTQDPLQLISGSPELPL*RSALST Trigger: AGTGGACAGTGCGGACCTCAAAAGGGGTAGCTCAGG...AGACCCTGAGATGAGTTGAAGGGGGTCCTGCGTGCATCTGAGTGAACCCCACCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR GCA 72 bp | AAGTCTGCAACTGGGGCTCATAAGCAACGGGCACTGTaGTGGAGGAGGGGCTGCACAGTGCAACTCCAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: KSATGAHKQRAL*WRRGCTVQLQV Trigger: AACCTGGAGTTGCACTGTGCAGCCCCTCCTCCAGCACAGTGCCCGTTGCTTATGAGCCCCAGTTGCAGACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR GCA 72 bp | CTGTACTGGGACCCAGGACCAACAACAGGCTTGGGATaGAGAAAAGGAATGGAGGCGGGGTCCCTCCCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: LYWDPGPTTGLG*RKGMEAGSLPS Trigger: ACTTGGGAGGGACCCCGCCTCCATTCCTTTTCTGCATCCCAAGCCTGTTGTTGGTCCTGGGTCCCAGTACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR CCA 72 bp | CCTTTTGAGGTCCGCACTGTCCACTGTGTGTCCTGGTaGGGTTCACTCAGATGCACGCAGGACCCCCTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: PFEVRTVHCVSW*GSLRCTQDPLQ Trigger: TTGAAGGGGGTCCTGCGTGCATCTGAGTGAACCCCACCAGGACACACAGTGGACAGTGCGGACCTCAAAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGGCAGAGGGCTGTACTGGGACCCAGGACCAACAACAGGCTTGGGATGCAGGGACCAACAACAGGCTaGGGATGCAGAAAAGGAATG | + |
|
Preference number: 3 (lower is better) Translates to: GRQRAVLGPRTNNRLGMQGPTTG*GCRKGM Trigger: CATTCCTTTTCTGCATCCCAAGCCTGTTGTTGGTCC...CTGCATCCCAAGCCTGTTGTTGGTCCTGGGTCCCAGTACAGCCCTCTGCCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR TCA 72 bp | TACAGACGAAACTCATCCTGCCTGAGCTACCCCTTTTaGGGTCCGCACTGTCCACTGTGTGTCCTGGTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: YRRNSSCLSYPF*GPHCPLCVLVG Trigger: CCCCACCAGGACACACAGTGGACAGTGCGGACCTCAAAAGGGGTAGCTCAGGCAGGATGAGTTTCGTCTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR GCA 72 bp | ACTGTCCACTGTGTGTCCTGGTGGGGTTCACTCAGATaGACGCAGGACCCCCTTCAACTCATCTCAGGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: TVHCVSWWGSLR*TQDPLQLISGS Trigger: AGACCCTGAGATGAGTTGAAGGGGGTCCTGCGTGCATCTGAGTGAACCCCACCAGGACACACAGTGGACAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR CCA 72 bp | GTGCTGGAGGAGGGGCTGCACAGTGCAACTCCAGGTTaGAAGGAGGCCTTTGTGTTAAAAAGCTCAGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: VLEEGLHSATPG*KEAFVLKSSGL Trigger: CAGGCCTGAGCTTTTTAACACAAAGGCCTCCTTCCAACCTGGAGTTGCACTGTGCAGCCCCTCCTCCAGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR CCA 72 bp | CAGGACCAACAACAGGCTTGGGATGCAGAAAAGGAATaGAGGCGGGGTCCCTCCCAAGTCCTCCGATCACTT | + |
|
Preference number: 3 (lower is better) Translates to: QDQQQAWDAEKE*RRGPSQVLRSL Trigger: AAGTGATCGGAGGACTTGGGAGGGACCCCGCCTCCATTCCTTTTCTGCATCCCAAGCCTGTTGTTGGTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGTGGGGTTCACTCAGATGCACGCAGGACCCCCTTCAACTCATCTCAGGGTCTCAGTGCAACTCCAGGTaGGAAGGAGGCCTTTGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: WWGSLRCTQDPLQLISGSQCNSR*EGGLCV Trigger: AACACAAAGGCCTCCTTCCAACCTGGAGTTGCACTG...AGACCCTGAGATGAGTTGAAGGGGGTCCTGCGTGCATCTGAGTGAACCCCACCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCCTGCCTGAGCTACCCCTTTTGAGGTCCGCACTGTCCACTGTGTGTCCTGGTCAGTGCAACTCCAGGTaGGAAGGAGGCCTTTGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: ILPELPLLRSALSTVCPGQCNSR*EGGLCV Trigger: AACACAAAGGCCTCCTTCCAACCTGGAGTTGCACTG...ACCAGGACACACAGTGGACAGTGCGGACCTCAAAAGGGGTAGCTCAGGCAGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGGCATCAGGCCTCTCTCTGCTCTTGCTTCCTTGGTTCTCGACCTTGACTGAACCTGAGCTACCCCTTTaGAGGTCCGCACTGTCCACT | + |
|
Preference number: 3 (lower is better) Translates to: WASGLSLLLLPWFSTLTEPELPL*RSALST Trigger: AGTGGACAGTGCGGACCTCAAAAGGGGTAGCTCAGG...TTCAGTCAAGGTCGAGAACCAAGGAAGCAAGAGCAGAGAGAGGCCTGATGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCCCCTTCAACTCATCTCAGGGTCTCACCATTCTGGGAGACAGGGAAGGCAGACAGTGCAACTCCAGGTaGGAAGGAGGCCTTTGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: TPFNSSQGLTILGDREGRQCNSR*EGGLCV Trigger: AACACAAAGGCCTCCTTCCAACCTGGAGTTGCACTG...TCTGCCTTCCCTGTCTCCCAGAATGGTGAGACCCTGAGATGAGTTGAAGGGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR CAA 90 bp | AACAACAGGCTTGGGATGCAGAAAAGGAATGGAGGCGGGGTCCCTCCCAAGTCCGGACCAACAACAGGCTaGGGATGCAGAAAAGGAATG | + |
|
Preference number: 3 (lower is better) Translates to: NNRLGMQKRNGGGVPPKSGPTTG*GCRKGM Trigger: CATTCCTTTTCTGCATCCCAAGCCTGTTGTTGGTCC...GGACTTGGGAGGGACCCCGCCTCCATTCCTTTTCTGCATCCCAAGCCTGTTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGTGGGGTTCACTCAGATGCACGCAGGACCCCCTTCAACTCATCTCAGGGTCTGGACCAACAACAGGCTaGGGATGCAGAAAAGGAATG | + |
|
Preference number: 3 (lower is better) Translates to: WWGSLRCTQDPLQLISGSGPTTG*GCRKGM Trigger: CATTCCTTTTCTGCATCCCAAGCCTGTTGTTGGTCC...AGACCCTGAGATGAGTTGAAGGGGGTCCTGCGTGCATCTGAGTGAACCCCACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGGGTTCACTCAGATGCACGCAGGACCCCCTTCAACTCATCTCAGGGTCTCACGGACCAACAACAGGCTaGGGATGCAGAAAAGGAATG | + |
|
Preference number: 3 (lower is better) Translates to: WGSLRCTQDPLQLISGSHGPTTG*GCRKGM Trigger: CATTCCTTTTCTGCATCCCAAGCCTGTTGTTGGTCC...GTGAGACCCTGAGATGAGTTGAAGGGGGTCCTGCGTGCATCTGAGTGAACCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGGCCTGGCCTAACAGCTCCCCAGACCCCGATCTATGACCATGCAAGGTTGAAATGGAGCAAAGGGTaGTTATCCTTAGTGTCGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LRPGLTAPQTPIYDHARLKWSKG*LSLVSL Trigger: CAGCGACACTAAGGATAACAACCCTTTGCTCCATTT...CAACCTTGCATGGTCATAGATCGGGGTCTGGGGAGCTGTTAGGCCAGGCCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR CAA 90 bp | AACAACAGGCTTGGGATGCAGAAAAGGAATGGAGGCGGGGTCCCTCCCAAGTCCAAATGGAGCAAAGGGTaGTTATCCTTAGTGTCGCTG | + |
|
Preference number: 3 (lower is better) Translates to: NNRLGMQKRNGGGVPPKSKWSKG*LSLVSL Trigger: CAGCGACACTAAGGATAACAACCCTTTGCTCCATTT...GGACTTGGGAGGGACCCCGCCTCCATTCCTTTTCTGCATCCCAAGCCTGTTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCCTGCCTGAGCTACCCCTTTTGAGGTCCGCACTGTCCACTGTGTGTCCTGGTAAATGGAGCAAAGGGTaGTTATCCTTAGTGTCGCTG | + |
|
Preference number: 3 (lower is better) Translates to: ILPELPLLRSALSTVCPGKWSKG*LSLVSL Trigger: CAGCGACACTAAGGATAACAACCCTTTGCTCCATTT...ACCAGGACACACAGTGGACAGTGCGGACCTCAAAAGGGGTAGCTCAGGCAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR-3UTR CAA 90 bp | CGCAGGACCCCCTTCAACTCATCTCAGGGTCTCACCATTCTGGGAGACAGGGAAAAATGGAGCAAAGGGTaGTTATCCTTAGTGTCGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RRTPFNSSQGLTILGDREKWSKG*LSLVSL Trigger: CAGCGACACTAAGGATAACAACCCTTTGCTCCATTT...TTCCCTGTCTCCCAGAATGGTGAGACCCTGAGATGAGTTGAAGGGGGTCCTGCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR GCA 72 bp | AAACCTCCCAGGAGTCTTCCCCTAACATCCTTAGGCTaGCTCCAACTGAATGCTACAAACGGATCTCTCCGA | + |
|
Preference number: 3 (lower is better) Translates to: KPPRSLPLTSLG*LQLNATNGSLR Trigger: TCGGAGAGATCCGTTTGTAGCATTCAGTTGGAGGCAGCCTAAGGATGTTAGGGGAAGACTCCTGGGAGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR GCA 72 bp | TCTTCCCCTAACATCCTTAGGCTGCCTCCAACTGAATaGTACAAACGGATCTCTCCGAAGACAGAGAACAAA | + |
|
Preference number: 3 (lower is better) Translates to: SSPNILRLPPTE*YKRISPKTENK Trigger: TTTGTTCTCTGTCTTCGGAGAGATCCGTTTGTAGCATTCAGTTGGAGGCAGCCTAAGGATGTTAGGGGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR TCA 72 bp | CTCTCTGCTCTTGCTTCCTTGGTTCTCGACCTTGACTaGAAATGGATTAGAATTAGGCTGATACAGTGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: LSALASLVLDLD*KWIRIRLIQCS Trigger: GCTACACTGTATCAGCCTAATTCTAATCCATTTTCAGTCAAGGTCGAGAACCAAGGAAGCAAGAGCAGAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| CDS-3UTR TCA 90 bp | CGCTGGGCTCTTCTGGCTTTTACCTTCACCGATGGGGGTACCTGGTGTCCTGAGGGCTGGCCACGGAGCTaGGGGTGGCAGACAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RWALLAFTFTDGGTWCPEGWPRS*GWQTGG Trigger: ACCACCTGTCTGCCACCCTCAGCTCCGTGGCCAGCC...CTCAGGACACCAGGTACCCCCATCGGTGAAGGTAAAAGCCAGAAGAGCCCAGCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS-3UTR GCA 90 bp | GGAAGGCAGAGGGCTGTACTGGGACCCAGGACCAACAACAGGCTTGGGATGCAGCCCCAGGGCTGCCTCTaGAGGAGGAAGAAGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: GRQRAVLGPRTNNRLGMQPQGCL*RRKKAT Trigger: GGTGGCCTTCTTCCTCCTGCAGAGGCAGCCCTGGGG...CTGCATCCCAAGCCTGTTGTTGGTCCTGGGTCCCAGTACAGCCCTCTGCCTTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS-3UTR TCA 90 bp | CGCTGGGCTCTTCTGGCTTTTACCTTCACCGATGGGGGTACCTGGTGTCCTGAGCCACCACGGAGTAGATaGAGGCCAGCTGGGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RWALLAFTFTDGGTWCPEPPRSR*RPAGLG Trigger: GCCCAGCCCAGCTGGCCTTCATCTACTCCGTGGTGG...CTCAGGACACCAGGTACCCCCATCGGTGAAGGTAAAAGCCAGAAGAGCCCAGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGAGGAGGGGCTGCACAGTGCAACTCCAGGTTGGAAGGAGGCCTTTGTGTTCCGGGTCGGAAGCGGTaGATCAGGGTGACCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AGGGAAQCNSRLEGGLCVPGRKR*IRVTRR Trigger: CCTCCTGGTCACCCTGATGCACCGCTTCCGACCCGG...AACACAAAGGCCTCCTTCCAACCTGGAGTTGCACTGTGCAGCCCCTCCTCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| CDS-3UTR GCA 90 bp | CTCAGGCCTGGCCTAACAGCTCCCCAGACCCCGATCTATGACCATGCAAGGTTGCCCCAGGGCTGCCTCTaGAGGAGGAAGAAGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LRPGLTAPQTPIYDHARLPQGCL*RRKKAT Trigger: GGTGGCCTTCTTCCTCCTGCAGAGGCAGCCCTGGGG...CAACCTTGCATGGTCATAGATCGGGGTCTGGGGAGCTGTTAGGCCAGGCCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGGCCTGGCCTAACAGCTCCCCAGACCCCGATCTATGACCATGCAAGGTTGGAAGGCCAGCTGGGCTaGGCGGAGCGAAGCCACACT | + |
|
Preference number: 4 (lower is better) Translates to: LRPGLTAPQTPIYDHARLEGQLG*AERSHT Trigger: AGTGTGGCTTCGCTCCGCCCAGCCCAGCTGGCCTTC...CAACCTTGCATGGTCATAGATCGGGGTCTGGGGAGCTGTTAGGCCAGGCCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS-3UTR TCA 90 bp | CTCAGGCCTGGCCTAACAGCTCCCCAGACCCCGATCTATGACCATGCAAGGTTGAGCGGTGCATCAGGGTaGCCAGGAGGGGGCCTATGT | + |
|
Preference number: 4 (lower is better) Translates to: LRPGLTAPQTPIYDHARLSGASG*PGGGLC Trigger: ACATAGGCCCCCTCCTGGTCACCCTGATGCACCGCT...CAACCTTGCATGGTCATAGATCGGGGTCTGGGGAGCTGTTAGGCCAGGCCTGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGAGGAGGGGCTGCACAGTGCAACTCCAGGTTGGAAGGAGGCCTTTGTGTTTGCCGTCCCCAGGGCTaGCTCTGCAGGAGGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AGGGAAQCNSRLEGGLCVCRPQG*LCRRKK Trigger: CTTCTTCCTCCTGCAGAGGCAGCCCTGGGGACGGCA...AACACAAAGGCCTCCTTCCAACCTGGAGTTGCACTGTGCAGCCCCTCCTCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS-3UTR GCA 90 bp | TTAGTGTCGCTGGGCTCTTCTGGCTTTTACCTTCACCGATGGGGGTACCTGGTGGCCCAGCTGCACCGCTaGCCCACACCACAAGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LVSLGSSGFYLHRWGYLVAQLHR*PTPQEG Trigger: GCCCTCTTGTGGTGTGGGGCAGCGGTGCAGCTGGGC...CACCAGGTACCCCCATCGGTGAAGGTAAAAGCCAGAAGAGCCCAGCGACACTAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGGCTCTTCTGGCTTTTACCTTCACCGATGGGGGTACCTGGTGTCCTGAGGATCAGAGAGCCCAGCTaGACCGCTGCCCCACACCAC | + |
|
Preference number: 4 (lower is better) Translates to: AGLFWLLPSPMGVPGVLRIREPS*TAAPHH Trigger: GTGGTGTGGGGCAGCGGTGCAGCTGGGCTCTCTGAT...CCTCAGGACACCAGGTACCCCCATCGGTGAAGGTAAAAGCCAGAAGAGCCCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS-3UTR GCA 90 bp | GGAAGGCAGAGGGCTGTACTGGGACCCAGGACCAACAACAGGCTTGGGATGCAGCCACCCAGGAGCCCATaGCAAAGACGCAGACCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GRQRAVLGPRTNNRLGMQPPRSP*QRRRPV Trigger: TACTGGTCTGCGTCTTTGGCATGGGCTCCTGGGTGG...CTGCATCCCAAGCCTGTTGTTGGTCCTGGGTCCCAGTACAGCCCTCTGCCTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| CDS-3UTR GCA 90 bp | GTGGGGTTCACTCAGATGCACGCAGGACCCCCTTCAACTCATCTCAGGGTCTCATCCTCTATGGAGCCTTaGCGTCCCCAGGGCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VGFTQMHAGPPSTHLRVSSSMEP*RPQGCL Trigger: GAGGCAGCCCTGGGGACGGCAAGGCTCCATAGAGGA...TGAGACCCTGAGATGAGTTGAAGGGGGTCCTGCGTGCATCTGAGTGAACCCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTCGCTGGGCTCTTCTGGCTTTTACCTTCACCGATGGGGGTACCTGGTGTCCGGGGCCTGATAGAGTaGAGGGTGACCTGGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVAGLFWLLPSPMGVPGVRGLIE*RVTWEW Trigger: CCACTCCCAGGTCACCCTGCACTCTATCAGGCCCCG...GACACCAGGTACCCCCATCGGTGAAGGTAAAAGCCAGAAGAGCCCAGCGACACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS-3UTR GCA 90 bp | TCCTTAGTGTCGCTGGGCTCTTCTGGCTTTTACCTTCACCGATGGGGGTACCTGATCCCTTGCCTGGGCTaGTCACAGGGGCACCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLVSLGSSGFYLHRWGYLIPCLG*SQGHPG Trigger: CCCTGGGTGCCCCTGTGAGCAGCCCAGGCAAGGGAT...CAGGTACCCCCATCGGTGAAGGTAAAAGCCAGAAGAGCCCAGCGACACTAAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS-3UTR GCA 90 bp | TGGGCATCAGGCCTCTCTCTGCTCTTGCTTCCTTGGTTCTCGACCTTGACTGAAGCCCAGCTGCACCGCTaGCCCACACCACAAGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: WASGLSLLLLPWFSTLTEAQLHR*PTPQEG Trigger: GCCCTCTTGTGGTGTGGGGCAGCGGTGCAGCTGGGC...TTCAGTCAAGGTCGAGAACCAAGGAAGCAAGAGCAGAGAGAGGCCTGATGCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS-3UTR CCA 90 bp | AGGAATGGAGGCGGGGTCCCTCCCAAGTCCTCCGATCACTTCCAGGTTGTATTAGAAGGCCAGCTGGGCTaGGCGGAGCGAAGCCACACT | + |
|
Preference number: 4 (lower is better) Translates to: RNGGGVPPKSSDHFQVVLEGQLG*AERSHT Trigger: AGTGTGGCTTCGCTCCGCCCAGCCCAGCTGGCCTTC...TAATACAACCTGGAAGTGATCGGAGGACTTGGGAGGGACCCCGCCTCCATTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| 3UTR CAA 72 bp | AGAGGGCTGTACTGGGACCCAGGACCAACAACAGGCTaGGGATGCAGAAAAGGAATGGAGGCGGGGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RGLYWDPGPTTG*GCRKGMEAGSL Trigger: GAGGGACCCCGCCTCCATTCCTTTTCTGCATCCCAAGCCTGTTGTTGGTCCTGGGTCCCAGTACAGCCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| CDS-3UTR TCA 90 bp | TTAGTGTCGCTGGGCTCTTCTGGCTTTTACCTTCACCGATGGGGGTACCTGGTGAGCGGTGCATCAGGGTaGCCAGGAGGGGGCCTATGT | + |
|
Preference number: 4 (lower is better) Translates to: LVSLGSSGFYLHRWGYLVSGASG*PGGGLC Trigger: ACATAGGCCCCCTCCTGGTCACCCTGATGCACCGCT...CACCAGGTACCCCCATCGGTGAAGGTAAAAGCCAGAAGAGCCCAGCGACACTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| CDS-3UTR TCA 90 bp | TCCTTAGTGTCGCTGGGCTCTTCTGGCTTTTACCTTCACCGATGGGGGTACCTGAGCGGTGCATCAGGGTaGCCAGGAGGGGGCCTATGT | + |
|
Preference number: 4 (lower is better) Translates to: SLVSLGSSGFYLHRWGYLSGASG*PGGGLC Trigger: ACATAGGCCCCCTCCTGGTCACCCTGATGCACCGCT...CAGGTACCCCCATCGGTGAAGGTAAAAGCCAGAAGAGCCCAGCGACACTAAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| CDS-3UTR TCA 90 bp | TGCAACTCCAGGTTGGAAGGAGGCCTTTGTGTTAAAAAGCTCAGGCCTGGCCTAGGCTGGCCACGGAGCTaGGGGTGGCAGACAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CNSRLEGGLCVKKLRPGLGWPRS*GWQTGG Trigger: ACCACCTGTCTGCCACCCTCAGCTCCGTGGCCAGCC...TAGGCCAGGCCTGAGCTTTTTAACACAAAGGCCTCCTTCCAACCTGGAGTTGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS-3UTR GCA 90 bp | CGCTGGGCTCTTCTGGCTTTTACCTTCACCGATGGGGGTACCTGGTGTCCTGAGCCACCCAGGAGCCCATaGCAAAGACGCAGACCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RWALLAFTFTDGGTWCPEPPRSP*QRRRPV Trigger: TACTGGTCTGCGTCTTTGGCATGGGCTCCTGGGTGG...CTCAGGACACCAGGTACCCCCATCGGTGAAGGTAAAAGCCAGAAGAGCCCAGCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| CDS-3UTR GCA 90 bp | CGCAGGACCCCCTTCAACTCATCTCAGGGTCTCACCATTCTGGGAGACAGGGAACTTCCACTGATCCCTTaGCTGGGCTGCTCACAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RRTPFNSSQGLTILGDRELPLIP*LGCSQG Trigger: CCCCTGTGAGCAGCCCAGGCAAGGGATCAGTGGAAG...TTCCCTGTCTCCCAGAATGGTGAGACCCTGAGATGAGTTGAAGGGGGTCCTGCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS-3UTR CCA 90 bp | CGCAGGACCCCCTTCAACTCATCTCAGGGTCTCACCATTCTGGGAGACAGGGAAGTGATACCGGAGCCTTaGACAAGGGCCACCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RRTPFNSSQGLTILGDREVIPEP*TRATRA Trigger: TGCCCTGGTGGCCCTTGTCCAAGGCTCCGGTATCAC...TTCCCTGTCTCCCAGAATGGTGAGACCCTGAGATGAGTTGAAGGGGGTCCTGCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| CDS-3UTR CCA 90 bp | AACAACAGGCTTGGGATGCAGAAAAGGAATGGAGGCGGGGTCCCTCCCAAGTCCGTGATACCGGAGCCTTaGACAAGGGCCACCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NNRLGMQKRNGGGVPPKSVIPEP*TRATRA Trigger: TGCCCTGGTGGCCCTTGTCCAAGGCTCCGGTATCAC...GGACTTGGGAGGGACCCCGCCTCCATTCCTTTTCTGCATCCCAAGCCTGTTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| CDS-3UTR TCA 90 bp | TGGGCATCAGGCCTCTCTCTGCTCTTGCTTCCTTGGTTCTCGACCTTGACTGAAAGCGGTGCATCAGGGTaGCCAGGAGGGGGCCTATGT | + |
|
Preference number: 4 (lower is better) Translates to: WASGLSLLLLPWFSTLTESGASG*PGGGLC Trigger: ACATAGGCCCCCTCCTGGTCACCCTGATGCACCGCT...TTCAGTCAAGGTCGAGAACCAAGGAAGCAAGAGCAGAGAGAGGCCTGATGCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| CDS-3UTR TCA 90 bp | CACGAAACTTCCCTAAGGTCTCACAGTAAGCAAGAGGCAGCTAAACCTCCCAGGCCACCACGGAGTAGATaGAGGCCAGCTGGGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HETSLRSHSKQEAAKPPRPPRSR*RPAGLG Trigger: GCCCAGCCCAGCTGGCCTTCATCTACTCCGTGGTGG...CCTGGGAGGTTTAGCTGCCTCTTGCTTACTGTGAGACCTTAGGGAAGTTTCGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS-3UTR GCA 90 bp | GTTCACTCAGATGCACGCAGGACCCCCTTCAACTCATCTCAGGGTCTCACCATTTGCCGTCCCCAGGGCTaGCTCTGCAGGAGGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VHSDARRTPFNSSQGLTICRPQG*LCRRKK Trigger: CTTCTTCCTCCTGCAGAGGCAGCCCTGGGGACGGCA...AATGGTGAGACCCTGAGATGAGTTGAAGGGGGTCCTGCGTGCATCTGAGTGAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS-3UTR CCA 90 bp | TTAGTGTCGCTGGGCTCTTCTGGCTTTTACCTTCACCGATGGGGGTACCTGGTGGTGATACCGGAGCCTTaGACAAGGGCCACCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LVSLGSSGFYLHRWGYLVVIPEP*TRATRA Trigger: TGCCCTGGTGGCCCTTGTCCAAGGCTCCGGTATCAC...CACCAGGTACCCCCATCGGTGAAGGTAAAAGCCAGAAGAGCCCAGCGACACTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGGTTCACTCAGATGCACGCAGGACCCCCTTCAACTCATCTCAGGGTCTCAGGAGCGAAGCCACACTaGCTTCCACTGATCCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VGFTQMHAGPPSTHLRVSGAKPH*LPLIPC Trigger: GCAAGGGATCAGTGGAAGCCAGTGTGGCTTCGCTCC...TGAGACCCTGAGATGAGTTGAAGGGGGTCCTGCGTGCATCTGAGTGAACCCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS-3UTR TCA 90 bp | CGCTGGGCTCTTCTGGCTTTTACCTTCACCGATGGGGGTACCTGGTGTCCTGAGGGGCTAAGGTTTCCCTaGGTGATGGGAGTCTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: RWALLAFTFTDGGTWCPEGLRFP*VMGVSI Trigger: TATGGAGACTCCCATCACTCAGGGAAACCTTAGCCC...CTCAGGACACCAGGTACCCCCATCGGTGAAGGTAAAAGCCAGAAGAGCCCAGCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS-3UTR GCA 90 bp | AGGAATGGAGGCGGGGTCCCTCCCAAGTCCTCCGATCACTTCCAGGTTGTATTACCACCCAGGAGCCCATaGCAAAGACGCAGACCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RNGGGVPPKSSDHFQVVLPPRSP*QRRRPV Trigger: TACTGGTCTGCGTCTTTGGCATGGGCTCCTGGGTGG...TAATACAACCTGGAAGTGATCGGAGGACTTGGGAGGGACCCCGCCTCCATTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| CDS-3UTR GCA 90 bp | ACCCCCTTCAACTCATCTCAGGGTCTCACCATTCTGGGAGACAGGGAAGGCAGACCACCCAGGAGCCCATaGCAAAGACGCAGACCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: TPFNSSQGLTILGDREGRPPRSP*QRRRPV Trigger: TACTGGTCTGCGTCTTTGGCATGGGCTCCTGGGTGG...TCTGCCTTCCCTGTCTCCCAGAATGGTGAGACCCTGAGATGAGTTGAAGGGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| CDS-3UTR GCA 90 bp | CACGAAACTTCCCTAAGGTCTCACAGTAAGCAAGAGGCAGCTAAACCTCCCAGGCGGGGCCTGATAGAGTaGAGGGTGACCTGGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HETSLRSHSKQEAAKPPRRGLIE*RVTWEW Trigger: CCACTCCCAGGTCACCCTGCACTCTATCAGGCCCCG...CCTGGGAGGTTTAGCTGCCTCTTGCTTACTGTGAGACCTTAGGGAAGTTTCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS-3UTR GCA 90 bp | TGGGCATCAGGCCTCTCTCTGCTCTTGCTTCCTTGGTTCTCGACCTTGACTGAACTTCCACTGATCCCTTaGCTGGGCTGCTCACAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: WASGLSLLLLPWFSTLTELPLIP*LGCSQG Trigger: CCCCTGTGAGCAGCCCAGGCAAGGGATCAGTGGAAG...TTCAGTCAAGGTCGAGAACCAAGGAAGCAAGAGCAGAGAGAGGCCTGATGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS-3UTR GCA 90 bp | CACGAAACTTCCCTAAGGTCTCACAGTAAGCAAGAGGCAGCTAAACCTCCCAGGATCAGAGAGCCCAGCTaGACCGCTGCCCCACACCAC | + |
|
Preference number: 4 (lower is better) Translates to: HETSLRSHSKQEAAKPPRIREPS*TAAPHH Trigger: GTGGTGTGGGGCAGCGGTGCAGCTGGGCTCTCTGAT...CCTGGGAGGTTTAGCTGCCTCTTGCTTACTGTGAGACCTTAGGGAAGTTTCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCATCAGGCCTCTCTCTGCTCTTGCTTCCTTGGTTCTCGACCTTGACTGAAGTGATACCGGAGCCTTaGACAAGGGCCACCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WASGLSLLLLPWFSTLTEVIPEP*TRATRA Trigger: TGCCCTGGTGGCCCTTGTCCAAGGCTCCGGTATCAC...TTCAGTCAAGGTCGAGAACCAAGGAAGCAAGAGCAGAGAGAGGCCTGATGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| CDS-3UTR CCA 90 bp | GTTCACTCAGATGCACGCAGGACCCCCTTCAACTCATCTCAGGGTCTCACCATTGGAGCGAAGCCACACTaGCTTCCACTGATCCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VHSDARRTPFNSSQGLTIGAKPH*LPLIPC Trigger: GCAAGGGATCAGTGGAAGCCAGTGTGGCTTCGCTCC...AATGGTGAGACCCTGAGATGAGTTGAAGGGGGTCCTGCGTGCATCTGAGTGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| 3UTR CAA 72 bp | TGTGCTGGAGGAGGGGCTGCACAGTGCAACTCCAGGTaGGAAGGAGGCCTTTGTGTTAAAAAGCTCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CAGGGAAQCNSR*EGGLCVKKLRP Trigger: AGGCCTGAGCTTTTTAACACAAAGGCCTCCTTCCAACCTGGAGTTGCACTGTGCAGCCCCTCCTCCAGCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| 3UTR CAA 72 bp | TTACAGACGAAACTCATCCTGCCTGAGCTACCCCTTTaGAGGTCCGCACTGTCCACTGTGTGTCCTGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LQTKLILPELPL*RSALSTVCPGG Trigger: CCCACCAGGACACACAGTGGACAGTGCGGACCTCAAAAGGGGTAGCTCAGGCAGGATGAGTTTCGTCTGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| CDS-3UTR GCA 90 bp | AACAGAGGCCTAGAGAATCACGAAACTTCCCTAAGGTCTCACAGTAAGCAAGAGATCCCTTGCCTGGGCTaGTCACAGGGGCACCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NRGLENHETSLRSHSKQEIPCLG*SQGHPG Trigger: CCCTGGGTGCCCCTGTGAGCAGCCCAGGCAAGGGAT...CTCTTGCTTACTGTGAGACCTTAGGGAAGTTTCGTGATTCTCTAGGCCTCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS-3UTR CCA 90 bp | AACAGAGGCCTAGAGAATCACGAAACTTCCCTAAGGTCTCACAGTAAGCAAGAGGGGCACCCAGGGAGCTaGTGTCCTCTGTGTCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: NRGLENHETSLRSHSKQEGHPGS*CPLCLG Trigger: CCCGAGACACAGAGGACACCAGCTCCCTGGGTGCCC...CTCTTGCTTACTGTGAGACCTTAGGGAAGTTTCGTGATTCTCTAGGCCTCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS-3UTR CCA 90 bp | CTCATCCTGCCTGAGCTACCCCTTTTGAGGTCCGCACTGTCCACTGTGTGTCCTCAGTACATTAACCAGTaGGAACATGAGCAGGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: LILPELPLLRSALSTVCPQYINQ*EHEQGT Trigger: GGTGCCCTGCTCATGTTCCCACTGGTTAATGTACTG...AGGACACACAGTGGACAGTGCGGACCTCAAAAGGGGTAGCTCAGGCAGGATGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGTTCACTCAGATGCACGCAGGACCCCCTTCAACTCATCTCAGGGTCTCACCAGTACATTAACCAGTaGGAACATGAGCAGGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: WGSLRCTQDPLQLISGSHQYINQ*EHEQGT Trigger: GGTGCCCTGCTCATGTTCCCACTGGTTAATGTACTG...GTGAGACCCTGAGATGAGTTGAAGGGGGTCCTGCGTGCATCTGAGTGAACCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS-3UTR GCA 90 bp | AACAGAGGCCTAGAGAATCACGAAACTTCCCTAAGGTCTCACAGTAAGCAAGAGTCCTCTATGGAGCCTTaGCGTCCCCAGGGCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NRGLENHETSLRSHSKQESSMEP*RPQGCL Trigger: GAGGCAGCCCTGGGGACGGCAAGGCTCCATAGAGGA...CTCTTGCTTACTGTGAGACCTTAGGGAAGTTTCGTGATTCTCTAGGCCTCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| 3UTR CAA 72 bp | GGTGTGGAGGATGGGGATGAAAAATGGAGCAAAGGGTaGTTATCCTTAGTGTCGCTGGGCTCTTCTGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GVEDGDEKWSKG*LSLVSLGSSGF Trigger: AAAGCCAGAAGAGCCCAGCGACACTAAGGATAACAACCCTTTGCTCCATTTTTCATCCCCATCCTCCACACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| CDS TCA 90 bp | GAAGGCCAGCTGGGCTGGGCGGAGCGAAGCCACACTGGCTTCCACTaGTCCCTTGCCTGGGCTGCTCACAGGGGCACCCAGGGAGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: EGQLGWAERSHTGFH*SLAWAAHRGTQGAG Trigger: ACCAGCTCCCTGGGTGCCCCTGTGAGCAGCCCAGGCAAGGGATCAGTGGAAGCCAGTGTGGCTTCGCTCCGCCCAGCCCAGCTGGCCTTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS GCA 90 bp | GGCGGAGCGAAGCCACACTGGCTTCCACTGATCCCTTGCCTGGGCTaGTCACAGGGGCACCCAGGGAGCTGGTGTCCTCTGTGTCTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GGAKPHWLPLIPCLG*SQGHPGSWCPLCLG Trigger: CCCGAGACACAGAGGACACCAGCTCCCTGGGTGCCCCTGTGAGCAGCCCAGGCAAGGGATCAGTGGAAGCCAGTGTGGCTTCGCTCCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS CCA 90 bp | TCCTCTGTGTCTCGGGGCCTGATAGAGTGCAGGGTGACCTGGGAGTaGAGGAGGTCCTCTATGGAGCCTTGCCGTCCCCAGGGCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSVSRGLIECRVTWE*RRSSMEPCRPQGCL Trigger: GAGGCAGCCCTGGGGACGGCAAGGCTCCATAGAGGACCTCCTCCACTCCCAGGTCACCCTGCACTCTATCAGGCCCCGAGACACAGAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS GCA 90 bp | TGGAGGAGGTCCTCTATGGAGCCTTGCCGTCCCCAGGGCTGCCTCTaGAGGAGGAAGAAGGCCACCAGACAGCAGCCTGTCAGGAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: WRRSSMEPCRPQGCL*RRKKATRQQPVRKD Trigger: GTCTTTCCTGACAGGCTGCTGTCTGGTGGCCTTCTTCCTCCTGCAGAGGCAGCCCTGGGGACGGCAAGGCTCCATAGAGGACCTCCTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS GCA 90 bp | TGGGAACATGAGCAGGGCACCAATCAGAGAGCCCAGCTGCACCGCTaGCCCACACCACAAGAGGGCACTGCGACTCCGGTCACGCAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: WEHEQGTNQRAQLHR*PTPQEGTATPVTQD Trigger: ATCTTGCGTGACCGGAGTCGCAGTGCCCTCTTGTGGTGTGGGGCAGCGGTGCAGCTGGGCTCTCTGATTGGTGCCCTGCTCATGTTCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS GCA 90 bp | TTAACCAGTGGGAACATGAGCAGGGCACCAATCAGAGAGCCCAGCTaGACCGCTGCCCCACACCACAAGAGGGCACTGCGACTCCGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LTSGNMSRAPIREPS*TAAPHHKRALRLRS Trigger: TGACCGGAGTCGCAGTGCCCTCTTGTGGTGTGGGGCAGCGGTGCAGCTGGGCTCTCTGATTGGTGCCCTGCTCATGTTCCCACTGGTTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS-3UTR CAA 90 bp | GTGGGGTTCACTCAGATGCACGCAGGACCCCCTTCAACTCATCTCAGGGTCTCAGGTGATACCGGAGCCTaGGACAAGGGCCACCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VGFTQMHAGPPSTHLRVSGDTGA*DKGHQG Trigger: GCCCTGGTGGCCCTTGTCCAAGGCTCCGGTATCACC...TGAGACCCTGAGATGAGTTGAAGGGGGTCCTGCGTGCATCTGAGTGAACCCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| CDS-3UTR CAA 90 bp | TGGTGGGGTTCACTCAGATGCACGCAGGACCCCCTTCAACTCATCTCAGGGTCTGTCCTCTATGGAGCCTaGCCGTCCCCAGGGCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: WWGSLRCTQDPLQLISGSVLYGA*PSPGLP Trigger: AGGCAGCCCTGGGGACGGCAAGGCTCCATAGAGGAC...AGACCCTGAGATGAGTTGAAGGGGGTCCTGCGTGCATCTGAGTGAACCCCACCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS-3UTR CAA 90 bp | TGGTGGGGTTCACTCAGATGCACGCAGGACCCCCTTCAACTCATCTCAGGGTCTAGGAGGGGGCCTATGTaGGCCAGCTGGATGACCACA | + |
|
Preference number: 5 (lower is better) Translates to: WWGSLRCTQDPLQLISGSRRGPM*ASWMTT Trigger: TGTGGTCATCCAGCTGGCCAACATAGGCCCCCTCCT...AGACCCTGAGATGAGTTGAAGGGGGTCCTGCGTGCATCTGAGTGAACCCCACCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| CDS-3UTR CAA 90 bp | TTAGTGTCGCTGGGCTCTTCTGGCTTTTACCTTCACCGATGGGGGTACCTGGTGGCTTCCACTGATCCCTaGCCTGGGCTGCTCACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LVSLGSSGFYLHRWGYLVASTDP*PGLLTG Trigger: CCCTGTGAGCAGCCCAGGCAAGGGATCAGTGGAAGC...CACCAGGTACCCCCATCGGTGAAGGTAAAAGCCAGAAGAGCCCAGCGACACTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS GCA 90 bp | TCCACCAGGGCCAGGAAGAAGGTGAGGACGATGAAGGCCACACTATaGTGTCCACCCTGTATCCAGGAGGTCACGTTCCACAGGAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: STRARKKVRTMKATL*CPPCIQEVTFHRKA Trigger: AGCCTTCCTGTGGAACGTGACCTCCTGGATACAGGGTGGACAGCATAGTGTGGCCTTCATCGTCCTCACCTTCTTCCTGGCCCTGGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| CDS-3UTR CAA 90 bp | ACCCCCTTCAACTCATCTCAGGGTCTCACCATTCTGGGAGACAGGGAAGGCAGAAGGAGGGGGCCTATGTaGGCCAGCTGGATGACCACA | + |
|
Preference number: 5 (lower is better) Translates to: TPFNSSQGLTILGDREGRRRGPM*ASWMTT Trigger: TGTGGTCATCCAGCTGGCCAACATAGGCCCCCTCCT...TCTGCCTTCCCTGTCTCCCAGAATGGTGAGACCCTGAGATGAGTTGAAGGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| CDS-3UTR CAA 90 bp | TGGGCATCAGGCCTCTCTCTGCTCTTGCTTCCTTGGTTCTCGACCTTGACTGAAGCTTCCACTGATCCCTaGCCTGGGCTGCTCACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: WASGLSLLLLPWFSTLTEASTDP*PGLLTG Trigger: CCCTGTGAGCAGCCCAGGCAAGGGATCAGTGGAAGC...TTCAGTCAAGGTCGAGAACCAAGGAAGCAAGAGCAGAGAGAGGCCTGATGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS-3UTR CAA 90 bp | TGGGCATCAGGCCTCTCTCTGCTCTTGCTTCCTTGGTTCTCGACCTTGACTGAAAGGAGGGGGCCTATGTaGGCCAGCTGGATGACCACA | + |
|
Preference number: 5 (lower is better) Translates to: WASGLSLLLLPWFSTLTERRGPM*ASWMTT Trigger: TGTGGTCATCCAGCTGGCCAACATAGGCCCCCTCCT...TTCAGTCAAGGTCGAGAACCAAGGAAGCAAGAGCAGAGAGAGGCCTGATGCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| CDS-3UTR CAA 90 bp | ATCCTGCCTGAGCTACCCCTTTTGAGGTCCGCACTGTCCACTGTGTGTCCTGGTCCATTGGTGAGTGCATaGACAAAGGCCACCACGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ILPELPLLRSALSTVCPGPLVSA*TKATTE Trigger: CTCCGTGGTGGCCTTTGTCAATGCACTCACCAATGG...ACCAGGACACACAGTGGACAGTGCGGACCTCAAAAGGGGTAGCTCAGGCAGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS CCA 90 bp | AGCGACCTGAGTGATGGGAGTCTCCATAGTGTTCAAGGTGGTCCCTaGTGTCTCCGTGACATTGACACAGGTGGTGATACCGGAGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SDLSDGSLHSVQGGP*CLRDIDTGGDTGAL Trigger: CAAGGCTCCGGTATCACCACCTGTGTCAATGTCACGGAGACACCAGGGACCACCTTGAACACTATGGAGACTCCCATCACTCAGGTCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109858.2 ENSMUST00000109859.9 |
||
| CDS-3UTR CAA 90 bp | GTGGAGGATGGGGATGAAAAATGGAGCAAAGGGTTGTTATCCTTAGTGTCGCTGGTCCTCTATGGAGCCTaGCCGTCCCCAGGGCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: VEDGDEKWSKGLLSLVSLVLYGA*PSPGLP Trigger: AGGCAGCCCTGGGGACGGCAAGGCTCCATAGAGGAC...CAGCGACACTAAGGATAACAACCCTTTGCTCCATTTTTCATCCCCATCCTCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS-3UTR CAA 90 bp | TTAGTGTCGCTGGGCTCTTCTGGCTTTTACCTTCACCGATGGGGGTACCTGGTGCCATTGGTGAGTGCATaGACAAAGGCCACCACGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LVSLGSSGFYLHRWGYLVPLVSA*TKATTE Trigger: CTCCGTGGTGGCCTTTGTCAATGCACTCACCAATGG...CACCAGGTACCCCCATCGGTGAAGGTAAAAGCCAGAAGAGCCCAGCGACACTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS-3UTR CAA 90 bp | AACAGAGGCCTAGAGAATCACGAAACTTCCCTAAGGTCTCACAGTAAGCAAGAGAGGAGGGGGCCTATGTaGGCCAGCTGGATGACCACA | + |
|
Preference number: 5 (lower is better) Translates to: NRGLENHETSLRSHSKQERRGPM*ASWMTT Trigger: TGTGGTCATCCAGCTGGCCAACATAGGCCCCCTCCT...CTCTTGCTTACTGTGAGACCTTAGGGAAGTTTCGTGATTCTCTAGGCCTCTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| CDS TCA 72 bp | CTGGGCTGGGCGGAGCGAAGCCACACTGGCTTCCACTaGTCCCTTGCCTGGGCTGCTCACAGGGGCACCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LGWAERSHTGFH*SLAWAAHRGTQ Trigger: CTGGGTGCCCCTGTGAGCAGCCCAGGCAAGGGATCAGTGGAAGCCAGTGTGGCTTCGCTCCGCCCAGCCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS GCA 72 bp | GGCGGAGCGAAGCCACACTGGCTTCCACTGATCCCTTaGCTGGGCTGCTCACAGGGGCACCCAGGGAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GGAKPHWLPLIP*LGCSQGHPGSW Trigger: CCAGCTCCCTGGGTGCCCCTGTGAGCAGCCCAGGCAAGGGATCAGTGGAAGCCAGTGTGGCTTCGCTCCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS CAA 72 bp | GGGCGGAGCGAAGCCACACTGGCTTCCACTGATCCCTaGCCTGGGCTGCTCACAGGGGCACCCAGGGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GRSEATLASTDP*PGLLTGAPREL Trigger: CAGCTCCCTGGGTGCCCCTGTGAGCAGCCCAGGCAAGGGATCAGTGGAAGCCAGTGTGGCTTCGCTCCGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS GCA 72 bp | ACAGGCACCTCAGACAGGCAGCCGGGTCGGAAGCGGTaGATCAGGGTGACCAGGAGGGGGCCTATGTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: TGTSDRQPGRKR*IRVTRRGPMLA Trigger: GGCCAACATAGGCCCCCTCCTGGTCACCCTGATGCACCGCTTCCGACCCGGCTGCCTGTCTGAGGTGCCTGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| CDS GCA 72 bp | TCCTCTATGGAGCCTTGCCGTCCCCAGGGCTGCCTCTaGAGGAGGAAGAAGGCCACCAGACAGCAGCCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SSMEPCRPQGCL*RRKKATRQQPV Trigger: GACAGGCTGCTGTCTGGTGGCCTTCTTCCTCCTGCAGAGGCAGCCCTGGGGACGGCAAGGCTCCATAGAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS GCA 72 bp | CCAGCTGCACCGCTGCCCCACACCACAAGAGGGCACTaGGACTCCGGTCACGCAAGATCACACCCAGCATCA | + |
|
Preference number: 6 (lower is better) Translates to: PAAPLPHTTRGH*DSGHARSHPAS Trigger: TGATGCTGGGTGTGATCTTGCGTGACCGGAGTCGCAGTGCCCTCTTGTGGTGTGGGGCAGCGGTGCAGCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS CCA 72 bp | TCTCGGGGCCTGATAGAGTGCAGGGTGACCTGGGAGTaGAGGAGGTCCTCTATGGAGCCTTGCCGTCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SRGLIECRVTWE*RRSSMEPCRPQ Trigger: CTGGGGACGGCAAGGCTCCATAGAGGACCTCCTCCACTCCCAGGTCACCCTGCACTCTATCAGGCCCCGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS TCA 72 bp | CAGCTGGGCGACGGCAGGGAAGGGCTAAGGTTTCCCTaGGTGATGGGAGTCTCCATAGTGTTCAAGGTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: QLGDGREGLRFP*VMGVSIVFKVV Trigger: GACCACCTTGAACACTATGGAGACTCCCATCACTCAGGGAAACCTTAGCCCTTCCCTGCCGTCGCCCAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073228.12 ENSMUST00000109861.8 |
||
| CDS GCA 72 bp | GCCAGGAAGAAGGTGAGGACGATGAAGGCCACACTATaGTGTCCACCCTGTATCCAGGAGGTCACGTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: ARKKVRTMKATL*CPPCIQEVTFH Trigger: GTGGAACGTGACCTCCTGGATACAGGGTGGACAGCATAGTGTGGCCTTCATCGTCCTCACCTTCTTCCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||
| CDS CCA 72 bp | AGTGATGGGAGTCTCCATAGTGTTCAAGGTGGTCCCTaGTGTCTCCGTGACATTGACACAGGTGGTGATACC | + |
|
Preference number: 6 (lower is better) Translates to: SDGSLHSVQGGP*CLRDIDTGGDT Trigger: GGTATCACCACCTGTGTCAATGTCACGGAGACACCAGGGACCACCTTGAACACTATGGAGACTCCCATCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073228.12 ENSMUST00000109858.2 ENSMUST00000109859.9 ENSMUST00000109861.8 |
||