Pregenerated sensors for SLC52A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022560Ensembl transcript IDs: ENSMUST00000023220.10
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTCGGATCACTGACCCGAGGAAGCCAAGAAAGGGAGCCAGGAGGTaGCTCTCCCAGTCTCTAGCCTCAGGCAGCCAAGGAGGGAGGGGC | + |
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Preference number: 1 (lower is better) Translates to: GRITDPRKPRKGARR*LSQSLASGSQGGRG Trigger: GCCCCTCCCTCCTTGGCTGCCTGAGGCTAGAGACTGGGAGAGCCACCTCCTGGCTCCCTTTCTTGGCTTCCTCGGGTCAGTGATCCGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR CCA 90 bp | CCAGGATCCTGGGGGAGAGGGGCTGCCTACGGAGGGAAGGAGGCCTaGCATAGAGCTGTGCTCATGGGATTAACAACCCATTGGATGAAG | + |
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Preference number: 1 (lower is better) Translates to: PGSWGRGAAYGGKEA*HRAVLMGLTTHWMK Trigger: CTTCATCCAATGGGTTGTTAATCCCATGAGCACAGCTCTATGCCAGGCCTCCTTCCCTCCGTAGGCAGCCCCTCTCCCCCAGGATCCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR CCA 90 bp | CTGCCTTCTGGGACAAGACATCCTGCTTCAGCGGCTGTCTTCTTGTaGGGTATCTTCCAACACGCTCCCCCAGACCAGGACTCAGGCACC | + |
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Preference number: 1 (lower is better) Translates to: LPSGTRHPASAAVFL*GIFQHAPPDQDSGT Trigger: GGTGCCTGAGTCCTGGTCTGGGGGAGCGTGTTGGAAGATACCCCACAAGAAGACAGCCGCTGAAGCAGGATGTCTTGTCCCAGAAGGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR TCA 90 bp | CATGCCAGACCCTCACACCCTGAAGACGCGGTGTGGAGCAGTGAGTaGCCCTGCTGCTTGTCCAGCCAATCGAAGGCATTATCCTGCTTC | + |
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Preference number: 1 (lower is better) Translates to: HARPSHPEDAVWSSE*PCCLSSQSKALSCF Trigger: GAAGCAGGATAATGCCTTCGATTGGCTGGACAAGCAGCAGGGTCACTCACTGCTCCACACCGCGTCTTCAGGGTGTGAGGGTCTGGCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR TCA 90 bp | ACAAATCCACATGTGAGCATAAGGCAGAGGCTATGGTCGGATCACTaGCCCGAGGAAGCCAAGAAAGGGAGCCAGGAGGTGGCTCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: TNPHVSIRQRLWSDH*PEEAKKGSQEVALP Trigger: TGGGAGAGCCACCTCCTGGCTCCCTTTCTTGGCTTCCTCGGGTCAGTGATCCGACCATAGCCTCTGCCTTATGCTCACATGTGGATTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR CCA 90 bp | GTCTGCCCTAAGACAGAGAGAAGGCAGAAACCCAGGCTCTCACCCTaGCATGGCCTTCAGACCCTCATAGCTTCAAAGGATCTTCCCAGT | + |
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Preference number: 1 (lower is better) Translates to: VCPKTERRQKPRLSP*HGLQTLIASKDLPS Trigger: ACTGGGAAGATCCTTTGAAGCTATGAGGGTCTGAAGGCCATGCCAGGGTGAGAGCCTGGGTTTCTGCCTTCTCTCTGTCTTAGGGCAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR GCA 90 bp | ACACACTTGGTGTTGTGTGTCCCTCACAGGTTTCTCTCTCTAGTCTaGCCTAAGACAGAGAGAAGGCAGAAACCCAGGCTCTCACCCTGG | + |
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Preference number: 1 (lower is better) Translates to: THLVLCVPHRFLSLV*PKTERRQKPRLSPW Trigger: CCAGGGTGAGAGCCTGGGTTTCTGCCTTCTCTCTGTCTTAGGGCAGACTAGAGAGAGAAACCTGTGAGGGACACACAACACCAAGTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR CCA 90 bp | TCAAAGAGTAATAGCTTCCTCAAATCACCCACTTCTAGCACAGGCTaGCCAGGATCTGGGGGACCCGTTCCCTTCTCTTCAGGAGACCCT | + |
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Preference number: 1 (lower is better) Translates to: SKSNSFLKSPTSSTG*PGSGGPVPFSSGDP Trigger: AGGGTCTCCTGAAGAGAAGGGAACGGGTCCCCCAGATCCTGGCCAGCCTGTGCTAGAAGTGGGTGATTTGAGGAAGCTATTACTCTTTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR CCA 90 bp | ACAGAAAACTGTGCAGTGTGGCTCCACACTCAAGGGACTGCCTTCTaGGACAAGACATCCTGCTTCAGCGGCTGTCTTCTTGTGGGGTAT | + |
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Preference number: 1 (lower is better) Translates to: TENCAVWLHTQGTAF*DKTSCFSGCLLVGY Trigger: ATACCCCACAAGAAGACAGCCGCTGAAGCAGGATGTCTTGTCCCAGAAGGCAGTCCCTTGAGTGTGGAGCCACACTGCACAGTTTTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR TCA 90 bp | GGCCTTCAGACCCTCATAGCTTCAAAGGATCTTCCCAGTTCTACCTaGGGCTCCAGTCCTTTGTGTGAGAGCTTTAGATCCACTCAGCCC | + |
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Preference number: 1 (lower is better) Translates to: GLQTLIASKDLPSST*GSSPLCESFRSTQP Trigger: GGGCTGAGTGGATCTAAAGCTCTCACACAAAGGACTGGAGCCTCAGGTAGAACTGGGAAGATCCTTTGAAGCTATGAGGGTCTGAAGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR CCA 90 bp | ATCGAAGGCATTATCCTGCTTCAGCCCCACATGGGCCCTGGGAGTTaGCCTTCAGCTACCGAAGTAGTCCCAGAAAAGCAAAGCAATCAT | + |
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Preference number: 1 (lower is better) Translates to: IEGIILLQPHMGPGS*PSATEVVPEKQSNH Trigger: ATGATTGCTTTGCTTTTCTGGGACTACTTCGGTAGCTGAAGGCCAACTCCCAGGGCCCATGTGGGGCTGAAGCAGGATAATGCCTTCGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR TCA 90 bp | AGTACAAAGGGGAAAAGGGTCAGTGGAAGGAGAGTCCTGCAGAGTTaGACCTTAATACTGGTCTCCCTTGCTTTACTCCTGCATACCGCC | + |
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Preference number: 1 (lower is better) Translates to: STKGKRVSGRRVLQS*TLILVSLALLLHTA Trigger: GGCGGTATGCAGGAGTAAAGCAAGGGAGACCAGTATTAAGGTTCAACTCTGCAGGACTCTCCTTCCACTGACCCTTTTCCCCTTTGTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR CCA 90 bp | TTACTGTTCTTCCAGAGGACCTGGGTTCAATTTCCAGCACTCTCATaGCACCTCATAGCAGTCGGTAACTCCAGTTCCAGTGGATTGGAT | + |
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Preference number: 1 (lower is better) Translates to: LLFFQRTWVQFPALS*HLIAVGNSSSSGLD Trigger: ATCCAATCCACTGGAACTGGAGTTACCGACTGCTATGAGGTGCCATGAGAGTGCTGGAAATTGAACCCAGGTCCTCTGGAAGAACAGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR CCA 90 bp | TCTTTGGTCCTCACACTGGTCTTTTCTCCAAAGCCAGGTCTCTTGTaGAGTGTGAAATATCCATATTATCTGTGTGTAGGGTGGCCACCT | + |
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Preference number: 1 (lower is better) Translates to: SLVLTLVFSPKPGLL*SVKYPYYLCVGWPP Trigger: AGGTGGCCACCCTACACACAGATAATATGGATATTTCACACTCCACAAGAGACCTGGCTTTGGAGAAAAGACCAGTGTGAGGACCAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR CCA 90 bp | GGACACATTGTGGCTTTGACTATAGAAGCTGGAAACTTTATTCGCTaGAGGTCTGATAAGCAATGCTGTCAAGTTCAAAGGTCCCAAGAG | + |
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Preference number: 1 (lower is better) Translates to: GHIVALTIEAGNFIR*RSDKQCCQVQRSQE Trigger: CTCTTGGGACCTTTGAACTTGACAGCATTGCTTATCAGACCTCCAGCGAATAAAGTTTCCAGCTTCTATAGTCAAAGCCACAATGTGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR GCA 90 bp | ACTATAGAAGCTGGAAACTTTATTCGCTGGAGGTCTGATAAGCAATaGTGTCAAGTTCAAAGGTCCCAAGAGGGTCAGAACTTTAAAAGA | + |
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Preference number: 1 (lower is better) Translates to: TIEAGNFIRWRSDKQ*CQVQRSQEGQNFKR Trigger: TCTTTTAAAGTTCTGACCCTCTTGGGACCTTTGAACTTGACAGCATTGCTTATCAGACCTCCAGCGAATAAAGTTTCCAGCTTCTATAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR-3UTR TCA 90 bp | GATAATAAAAAGAATTACAGCCGGGCAGTGGTGGCACCCGCCTTTGATCCCAGCCAGAGGTCCCAGGGGTaGAGGCCGCGCAGCTCCAAT | + |
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Preference number: 2 (lower is better) Translates to: DNKKNYSRAVVAPAFDPSQRSQG*RPRSSN Trigger: ATTGGAGCTGCGCGGCCTTCACCCCTGGGACCTCTG...GCTGGGATCAAAGGCGGGTGCCACCACTGCCCGGCTGTAATTCTTTTTATTATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR-3UTR GCA 90 bp | CACTCAAGGGACTGCCTTCTGGGACAAGACATCCTGCTTCAGCGGCTGTCTTCTCCCTGGGTCTGGGCCTaGTCTTTGGTCCTCACACTG | + |
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Preference number: 2 (lower is better) Translates to: HSRDCLLGQDILLQRLSSPWVWA*SLVLTL Trigger: CAGTGTGAGGACCAAAGAGCAGGCCCAGACCCAGGG...AGAAGACAGCCGCTGAAGCAGGATGTCTTGTCCCAGAAGGCAGTCCCTTGAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR-3UTR CCA 90 bp | CTGAAAGAACCGGGTGGAAATCCCCTTCTCCCACGCAACTCCTGTGAGTTCAAAGTAGGGTGGCCACCTTaGGCCACAGGACCCAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: LKEPGGNPLLPRNSCEFKVGWPP*ATGPRH Trigger: GTGCCTGGGTCCTGTGGCCCAAGGTGGCCACCCTAC...TTTGAACTCACAGGAGTTGCGTGGGAGAAGGGGATTTCCACCCGGTTCTTTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR-3UTR TCA 90 bp | GTTCTTCCAGAGGACCTGGGTTCAATTTCCAGCACTCTCATGGCACCTCATAGCAGGACCCAGGCACTGTaGCCATCCCTCCTACCCTCC | + |
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Preference number: 2 (lower is better) Translates to: VLPEDLGSISSTLMAPHSRTQAL*PSLLPS Trigger: GGAGGGTAGGAGGGATGGTCACAGTGCCTGGGTCCT...GCTATGAGGTGCCATGAGAGTGCTGGAAATTGAACCCAGGTCCTCTGGAAGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR-3UTR TCA 90 bp | GTTCTTCCAGAGGACCTGGGTTCAATTTCCAGCACTCTCATGGCACCTCATAGCCGCGGTGTGGAGCAGTaGGTGACCCTGCTGCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: VLPEDLGSISSTLMAPHSRGVEQ*VTLLLV Trigger: GACAAGCAGCAGGGTCACTCACTGCTCCACACCGCG...GCTATGAGGTGCCATGAGAGTGCTGGAAATTGAACCCAGGTCCTCTGGAAGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGGACCTGGGTTCAATTTCCAGCACTCTCATGGCACCTCATAGCAGTCGGGGAGGGAAGGAGGCCTaGCATAGAGCTGTGCTCATG | + |
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Preference number: 2 (lower is better) Translates to: PEDLGSISSTLMAPHSSRGGKEA*HRAVLM Trigger: CATGAGCACAGCTCTATGCCAGGCCTCCTTCCCTCC...CCGACTGCTATGAGGTGCCATGAGAGTGCTGGAAATTGAACCCAGGTCCTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR CAA 90 bp | AAAGACAAGCCTTGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTaGCCTAGAAAGCCCAAGGCCCTGGGTTCGATCCTCAGCTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: KDKPWGWGFSSVVER*PRKPKALGSILSSG Trigger: TCCAGAGCTGAGGATCGAACCCAGGGCCTTGGGCTTTCTAGGCAAGCGCTCTACCACTGAGCTAAATCCCCAACCCCAAGGCTTGTCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR-3UTR TCA 90 bp | GGGGGCTGGAGAGAAGGCTCAGTGGTTAAAAGCACTTACTGTTCTTCCAGAGGAGTGTGGAGCAGTGAGTaGCCCTGCTGCTTGTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: GGWREGSVVKSTYCSSRGVWSSE*PCCLSS Trigger: GCTGGACAAGCAGCAGGGTCACTCACTGCTCCACAC...TCCTCTGGAAGAACAGTAAGTGCTTTTAACCACTGAGCCTTCTCTCCAGCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR-3UTR GCA 90 bp | CCCTTACCTCTGCCGGCCCATCAGTGCCTGCCTACCTTGCCCTATCACTCCCGCAGGTCTGATAAGCAATaGTGTCAAGTTCAAAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: PLPLPAHQCLPTLPYHSRRSDKQ*CQVQRS Trigger: GGACCTTTGAACTTGACAGCATTGCTTATCAGACCT...GCGGGAGTGATAGGGCAAGGTAGGCAGGCACTGATGGGCCGGCAGAGGTAAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR-3UTR GCA 90 bp | GTGGTAACACAGAAAACTGTGCAGTGTGGCTCCACACTCAAGGGACTGCCTTCTCTGCCGGCCCATCAGTaGCTGCCTACCTTGCCCTAT | + |
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Preference number: 2 (lower is better) Translates to: VVTQKTVQCGSTLKGLPSLPAHQ*LPTLPY Trigger: ATAGGGCAAGGTAGGCAGGCACTGATGGGCCGGCAG...AGAAGGCAGTCCCTTGAGTGTGGAGCCACACTGCACAGTTTTCTGTGTTACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR-3UTR CCA 90 bp | GGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGAAAGCCCAAGGCCCTGGCCCAGGAGTTTGAGTaGAAGACAGCTAGCTATGTG | + |
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Preference number: 2 (lower is better) Translates to: GWGFSSVVERLPRKPKALAQEFE*KTASYV Trigger: CACATAGCTAGCTGTCTTCCACTCAAACTCCTGGGC...CAGGGCCTTGGGCTTTCTAGGCAAGCGCTCTACCACTGAGCTAAATCCCCAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR-3UTR CCA 90 bp | CACTCAAGGGACTGCCTTCTGGGACAAGACATCCTGCTTCAGCGGCTGTCTTCTTCTGAAAGAACCGGGTaGAAATCCCCTTCTCCCACG | + |
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Preference number: 2 (lower is better) Translates to: HSRDCLLGQDILLQRLSSSERTG*KSPSPT Trigger: CGTGGGAGAAGGGGATTTCCACCCGGTTCTTTCAGA...AGAAGACAGCCGCTGAAGCAGGATGTCTTGTCCCAGAAGGCAGTCCCTTGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR-3UTR CCA 90 bp | AATAAAAAGAATTACAGCCGGGCAGTGGTGGCACCCGCCTTTGATCCCAGCACTGAAAGCCCAAGGCCCTaGGTTCGATCCTCAGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: NKKNYSRAVVAPAFDPSTESPRP*VRSSAL Trigger: CAGAGCTGAGGATCGAACCCAGGGCCTTGGGCTTTC...AGTGCTGGGATCAAAGGCGGGTGCCACCACTGCCCGGCTGTAATTCTTTTTATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR-3UTR TCA 90 bp | CACTCAAGGGACTGCCTTCTGGGACAAGACATCCTGCTTCAGCGGCTGTCTTCTCTCCTAGCCAATACCTaGGCTTCGGAAACTCCTAAG | + |
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Preference number: 2 (lower is better) Translates to: HSRDCLLGQDILLQRLSSLLANT*ASETPK Trigger: CTTAGGAGTTTCCGAAGCTCAGGTATTGGCTAGGAG...AGAAGACAGCCGCTGAAGCAGGATGTCTTGTCCCAGAAGGCAGTCCCTTGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR-3UTR CCA 90 bp | GTTCTTCCAGAGGACCTGGGTTCAATTTCCAGCACTCTCATGGCACCTCATAGCTATCTGTGTGTAGGGTaGCCACCTTGGGCCACAGGA | + |
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Preference number: 2 (lower is better) Translates to: VLPEDLGSISSTLMAPHSYLCVG*PPWATG Trigger: TCCTGTGGCCCAAGGTGGCCACCCTACACACAGATA...GCTATGAGGTGCCATGAGAGTGCTGGAAATTGAACCCAGGTCCTCTGGAAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR-3UTR CCA 90 bp | CACCCTGGTACACACTTGGTGTTGTGTGTCCCTCACAGGTTTCTCTCTCTAGTCATCTATCCCTGGGTCTaGGCCTGCTCTTTGGTCCTC | + |
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Preference number: 2 (lower is better) Translates to: HPGTHLVLCVPHRFLSLVIYPWV*ACSLVL Trigger: GAGGACCAAAGAGCAGGCCCAGACCCAGGGATAGAT...GACTAGAGAGAGAAACCTGTGAGGGACACACAACACCAAGTGTGTACCAGGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR-3UTR CCA 90 bp | CTGAAAGAACCGGGTGGAAATCCCCTTCTCCCACGCAACTCCTGTGAGTTCAAAATGGGCCCTGGGAGTTaGCCTTCAGCTACCGAAGTA | + |
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Preference number: 2 (lower is better) Translates to: LKEPGGNPLLPRNSCEFKMGPGS*PSATEV Trigger: TACTTCGGTAGCTGAAGGCCAACTCCCAGGGCCCAT...TTTGAACTCACAGGAGTTGCGTGGGAGAAGGGGATTTCCACCCGGTTCTTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR CAA 90 bp | AATCGAAGGCATTATCCTGCTTCAGCCCCACATGGGCCCTGGGAGTaGGCCTTCAGCTACCGAAGTAGTCCCAGAAAAGCAAAGCAATCA | + |
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Preference number: 2 (lower is better) Translates to: NRRHYPASAPHGPWE*AFSYRSSPRKAKQS Trigger: TGATTGCTTTGCTTTTCTGGGACTACTTCGGTAGCTGAAGGCCAACTCCCAGGGCCCATGTGGGGCTGAAGCAGGATAATGCCTTCGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR-3UTR CCA 90 bp | CACTCAAGGGACTGCCTTCTGGGACAAGACATCCTGCTTCAGCGGCTGTCTTCTCTTTGGTCCTCACACTaGTCTTTTCTCCAAAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: HSRDCLLGQDILLQRLSSLWSSH*SFLQSQ Trigger: CTGGCTTTGGAGAAAAGACCAGTGTGAGGACCAAAG...AGAAGACAGCCGCTGAAGCAGGATGTCTTGTCCCAGAAGGCAGTCCCTTGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR-3UTR CCA 90 bp | GCTAATGCTCCACACCCCCTCTTGTCTTCCAGTATCATAGAAATTAGGGCGCTCCTACTGGGGACTCAGTaGGCTAAGAAACCAGGATGG | + |
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Preference number: 2 (lower is better) Translates to: ANAPHPLLSSSIIEIRALLLGTQ*AKKPGW Trigger: CCATCCTGGTTTCTTAGCCCACTGAGTCCCCAGTAG...GAGCGCCCTAATTTCTATGATACTGGAAGACAAGAGGGGGTGTGGAGCATTAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR CAA 90 bp | GAGTACAAAGGGGAAAAGGGTCAGTGGAAGGAGAGTCCTGCAGAGTaGAACCTTAATACTGGTCTCCCTTGCTTTACTCCTGCATACCGC | + |
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Preference number: 2 (lower is better) Translates to: EYKGEKGQWKESPAE*NLNTGLPCFTPAYR Trigger: GCGGTATGCAGGAGTAAAGCAAGGGAGACCAGTATTAAGGTTCAACTCTGCAGGACTCTCCTTCCACTGACCCTTTTCCCCTTTGTACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR-3UTR TCA 90 bp | GTGGTAACACAGAAAACTGTGCAGTGTGGCTCCACACTCAAGGGACTGCCTTCTAGTTTCCTTGTTGGTTaGCTTCCCAACCATGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: VVTQKTVQCGSTLKGLPSSFLVG*LPNHAR Trigger: TCTGGCATGGTTGGGAAGTCAACCAACAAGGAAACT...AGAAGGCAGTCCCTTGAGTGTGGAGCCACACTGCACAGTTTTCTGTGTTACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR-3UTR TCA 90 bp | GTGCGCATCTGTAGTACCAGAACTCAAGGCAGGAGGATCCTTGCTAAGTTTGAACTTCCCAGTTCTACCTaGGGCTCCAGTCCTTTGTGT | + |
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Preference number: 2 (lower is better) Translates to: VRICSTRTQGRRILAKFELPSST*GSSPLC Trigger: ACACAAAGGACTGGAGCCTCAGGTAGAACTGGGAAG...TTCAAACTTAGCAAGGATCCTCCTGCCTTGAGTTCTGGTACTACAGATGCGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR-3UTR CCA 90 bp | GGGGGCTGGAGAGAAGGCTCAGTGGTTAAAAGCACTTACTGTTCTTCCAGAGGACCCAAGTTTCCTTGTTaGTTGACTTCCCAACCATGC | + |
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Preference number: 2 (lower is better) Translates to: GGWREGSVVKSTYCSSRGPKFPC*LTSQPC Trigger: GCATGGTTGGGAAGTCAACCAACAAGGAAACTTGGG...TCCTCTGGAAGAACAGTAAGTGCTTTTAACCACTGAGCCTTCTCTCCAGCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR-3UTR CCA 90 bp | CTGAAAGAACCGGGTGGAAATCCCCTTCTCCCACGCAACTCCTGTGAGTTCAAATTCTTCCAGAGGACCTaGGTTCAATTTCCAGCACTC | + |
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Preference number: 2 (lower is better) Translates to: LKEPGGNPLLPRNSCEFKFFQRT*VQFPAL Trigger: GAGTGCTGGAAATTGAACCCAGGTCCTCTGGAAGAA...TTTGAACTCACAGGAGTTGCGTGGGAGAAGGGGATTTCCACCCGGTTCTTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR-3UTR CCA 90 bp | AATAAAAAGAATTACAGCCGGGCAGTGGTGGCACCCGCCTTTGATCCCAGCACTAAGCCAGGTCTCTTGTaGAGTGTGAAATATCCATAT | + |
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Preference number: 2 (lower is better) Translates to: NKKNYSRAVVAPAFDPSTKPGLL*SVKYPY Trigger: ATATGGATATTTCACACTCCACAAGAGACCTGGCTT...AGTGCTGGGATCAAAGGCGGGTGCCACCACTGCCCGGCTGTAATTCTTTTTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR-3UTR CCA 90 bp | GCTAATGCTCCACACCCCCTCTTGTCTTCCAGTATCATAGAAATTAGGGCGCTCGGAGAGAAGGCTCAGTaGTTAAAAGCACTTACTGTT | + |
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Preference number: 2 (lower is better) Translates to: ANAPHPLLSSSIIEIRALGEKAQ*LKALTV Trigger: AACAGTAAGTGCTTTTAACCACTGAGCCTTCTCTCC...GAGCGCCCTAATTTCTATGATACTGGAAGACAAGAGGGGGTGTGGAGCATTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR CAA 90 bp | TTTCTGTACTTCTATACAATCGTGTTTTGCTTTTGTCTTGCAGTGTaGGAGACTGAACCCAGTGTCTTGCACATTCTAGACAAGTACTCT | + |
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Preference number: 2 (lower is better) Translates to: FLYFYTIVFCFCLAV*ETEPSVLHILDKYS Trigger: AGAGTACTTGTCTAGAATGTGCAAGACACTGGGTTCAGTCTCCAACACTGCAAGACAAAAGCAAAACACGATTGTATAGAAGTACAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR TCA 72 bp | AGGGTGGCCACCTTGGGCCACAGGACCCAGGCACTGTaGCCATCCCTCCTACCCTCCAGGTGGAGACAAGTG | + |
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Preference number: 3 (lower is better) Translates to: RVATLGHRTQAL*PSLLPSRWRQV Trigger: CACTTGTCTCCACCTGGAGGGTAGGAGGGATGGTCACAGTGCCTGGGTCCTGTGGCCCAAGGTGGCCACCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR GCA 72 bp | TCCTGCATACCGCCCTTACCTCTGCCGGCCCATCAGTaGCTGCCTACCTTGCCCTATCACTCCCGCTCCTCC | + |
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Preference number: 3 (lower is better) Translates to: SCIPPLPLPAHQ*LPTLPYHSRSS Trigger: GGAGGAGCGGGAGTGATAGGGCAAGGTAGGCAGGCACTGATGGGCCGGCAGAGGTAAGGGCGGTATGCAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR GCA 72 bp | CCCTGCTGCTTGTCCAGCCAATCGAAGGCATTATCCTaGTTCAGCCCCACATGGGCCCTGGGAGTTGGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: PCCLSSQSKALS*FSPTWALGVGL Trigger: AAGGCCAACTCCCAGGGCCCATGTGGGGCTGAAGCAGGATAATGCCTTCGATTGGCTGGACAAGCAGCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR CCA 72 bp | TGGGGGAGAGGGGCTGCCTACGGAGGGAAGGAGGCCTaGCATAGAGCTGTGCTCATGGGATTAACAACCCAT | + |
|
Preference number: 3 (lower is better) Translates to: WGRGAAYGGKEA*HRAVLMGLTTH Trigger: ATGGGTTGTTAATCCCATGAGCACAGCTCTATGCCAGGCCTCCTTCCCTCCGTAGGCAGCCCCTCTCCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR-3UTR CAA 90 bp | CCCTTACCTCTGCCGGCCCATCAGTGCCTGCCTACCTTGCCCTATCACTCCCGCAAGTTTCCTTGTTGGTaGACTTCCCAACCATGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: PLPLPAHQCLPTLPYHSRKFPCW*TSQPCQ Trigger: CTGGCATGGTTGGGAAGTCAACCAACAAGGAAACTT...GCGGGAGTGATAGGGCAAGGTAGGCAGGCACTGATGGGCCGGCAGAGGTAAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR TCA 72 bp | CCCTCACACCCTGAAGACGCGGTGTGGAGCAGTGAGTaGCCCTGCTGCTTGTCCAGCCAATCGAAGGCATTA | + |
|
Preference number: 3 (lower is better) Translates to: PSHPEDAVWSSE*PCCLSSQSKAL Trigger: TAATGCCTTCGATTGGCTGGACAAGCAGCAGGGTCACTCACTGCTCCACACCGCGTCTTCAGGGTGTGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR GCA 72 bp | GGCCGCGCAGCTCCAATCTATCCCTGGGTCTGGGCCTaGTCTTTGGTCCTCACACTGGTCTTTTCTCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: GRAAPIYPWVWA*SLVLTLVFSPK Trigger: CTTTGGAGAAAAGACCAGTGTGAGGACCAAAGAGCAGGCCCAGACCCAGGGATAGATTGGAGCTGCGCGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR CCA 72 bp | GGTGAAGGCCGCGCAGCTCCAATCTATCCCTGGGTCTaGGCCTGCTCTTTGGTCCTCACACTGGTCTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: GEGRAAPIYPWV*ACSLVLTLVFS Trigger: AGAAAAGACCAGTGTGAGGACCAAAGAGCAGGCCCAGACCCAGGGATAGATTGGAGCTGCGCGGCCTTCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR CCA 72 bp | ACGCTCCCCCAGACCAGGACTCAGGCACCTGGATGGTaGGCTCTCCTGACTGTCATGAAAACCTGTGGACTT | + |
|
Preference number: 3 (lower is better) Translates to: TLPQTRTQAPGW*ALLTVMKTCGL Trigger: AAGTCCACAGGTTTTCATGACAGTCAGGAGAGCCCACCATCCAGGTGCCTGAGTCCTGGTCTGGGGGAGCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR CCA 72 bp | AACACGCTCCCCCAGACCAGGACTCAGGCACCTGGATaGTGGGCTCTCCTGACTGTCATGAAAACCTGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: NTLPQTRTQAPG*WALLTVMKTCG Trigger: TCCACAGGTTTTCATGACAGTCAGGAGAGCCCACCATCCAGGTGCCTGAGTCCTGGTCTGGGGGAGCGTGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR CCA 72 bp | TTCCAACACGCTCCCCCAGACCAGGACTCAGGCACCTaGATGGTGGGCTCTCCTGACTGTCATGAAAACCTG | + |
|
Preference number: 3 (lower is better) Translates to: FQHAPPDQDSGT*MVGSPDCHENL Trigger: CAGGTTTTCATGACAGTCAGGAGAGCCCACCATCCAGGTGCCTGAGTCCTGGTCTGGGGGAGCGTGTTGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR TCA 72 bp | CATGTGAGCATAAGGCAGAGGCTATGGTCGGATCACTaGCCCGAGGAAGCCAAGAAAGGGAGCCAGGAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: HVSIRQRLWSDH*PEEAKKGSQEV Trigger: CACCTCCTGGCTCCCTTTCTTGGCTTCCTCGGGTCAGTGATCCGACCATAGCCTCTGCCTTATGCTCACATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR-3UTR CAA 90 bp | TGCTACTGGGGACTCAGTGGGCTAAGAAACCAGGATGGGGAAGACATTAATGTTTGTAGGGTGGCCACCTaGGGCCACAGGACCCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: CYWGLSGLRNQDGEDINVCRVAT*GHRTQA Trigger: TGCCTGGGTCCTGTGGCCCAAGGTGGCCACCCTACA...AACATTAATGTCTTCCCCATCCTGGTTTCTTAGCCCACTGAGTCCCCAGTAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR-3UTR CAA 90 bp | GGCCCTGCAAGAGCCACTAGGCGAGTGGAGGAAGCTATAACCAGGATCCTGGGGCCAAAGCCAGGTCTCTaGTGGAGTGTGAAATATCCA | + |
|
Preference number: 3 (lower is better) Translates to: GPARATRRVEEAITRILGPKPGL*WSVKYP Trigger: TGGATATTTCACACTCCACAAGAGACCTGGCTTTGG...CCCCAGGATCCTGGTTATAGCTTCCTCCACTCGCCTAGTGGCTCTTGCAGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR CCA 72 bp | CAGCTCCAATCTATCCCTGGGTCTGGGCCTGCTCTTTaGTCCTCACACTGGTCTTTTCTCCAAAGCCAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: QLQSIPGSGPAL*SSHWSFLQSQV Trigger: GACCTGGCTTTGGAGAAAAGACCAGTGTGAGGACCAAAGAGCAGGCCCAGACCCAGGGATAGATTGGAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR CCA 72 bp | TGTGCAGTGTGGCTCCACACTCAAGGGACTGCCTTCTaGGACAAGACATCCTGCTTCAGCGGCTGTCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: CAVWLHTQGTAF*DKTSCFSGCLL Trigger: AAGAAGACAGCCGCTGAAGCAGGATGTCTTGTCCCAGAAGGCAGTCCCTTGAGTGTGGAGCCACACTGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR GCA 72 bp | CACACTCAAGGGACTGCCTTCTGGGACAAGACATCCTaGTTCAGCGGCTGTCTTCTTGTGGGGTATCTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: HTQGTAFWDKTS*FSGCLLVGYLP Trigger: TGGAAGATACCCCACAAGAAGACAGCCGCTGAAGCAGGATGTCTTGTCCCAGAAGGCAGTCCCTTGAGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR CCA 72 bp | ATTATCCTGCTTCAGCCCCACATGGGCCCTGGGAGTTaGCCTTCAGCTACCGAAGTAGTCCCAGAAAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: IILLQPHMGPGS*PSATEVVPEKQ Trigger: TTGCTTTTCTGGGACTACTTCGGTAGCTGAAGGCCAACTCCCAGGGCCCATGTGGGGCTGAAGCAGGATAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR CCA 72 bp | AGAGAGAAGGCAGAAACCCAGGCTCTCACCCTGGCATaGCCTTCAGACCCTCATAGCTTCAAAGGATCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: REKAETQALTLA*PSDPHSFKGSS Trigger: GGAAGATCCTTTGAAGCTATGAGGGTCTGAAGGCCATGCCAGGGTGAGAGCCTGGGTTTCTGCCTTCTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR CCA 72 bp | AATAGCTTCCTCAAATCACCCACTTCTAGCACAGGCTaGCCAGGATCTGGGGGACCCGTTCCCTTCTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: NSFLKSPTSSTG*PGSGGPVPFSS Trigger: TGAAGAGAAGGGAACGGGTCCCCCAGATCCTGGCCAGCCTGTGCTAGAAGTGGGTGATTTGAGGAAGCTATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR-3UTR CAA 90 bp | GATAATAAAAAGAATTACAGCCGGGCAGTGGTGGCACCCGCCTTTGATCCCAGCCACCCTGGTACACACTaGGTGTTGTGTGTCCCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: DNKKNYSRAVVAPAFDPSHPGTH*VLCVPH Trigger: GTGAGGGACACACAACACCAAGTGTGTACCAGGGTG...GCTGGGATCAAAGGCGGGTGCCACCACTGCCCGGCTGTAATTCTTTTTATTATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR CCA 72 bp | TGGAGTGTGAAATATCCATATTATCTGTGTGTAGGGTaGCCACCTTGGGCCACAGGACCCAGGCACTGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: WSVKYPYYLCVG*PPWATGPRHCD Trigger: GTCACAGTGCCTGGGTCCTGTGGCCCAAGGTGGCCACCCTACACACAGATAATATGGATATTTCACACTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR-3UTR CAA 90 bp | GAGGCCAGGAGGAAAACAAAGCCAGGCGGCCAATTCGAGGACAGAAGTGTTAACCCCCAAGTTTCCTTGTaGGTTGACTTCCCAACCATG | + |
|
Preference number: 3 (lower is better) Translates to: EARRKTKPGGQFEDRSVNPQVSL*VDFPTM Trigger: CATGGTTGGGAAGTCAACCAACAAGGAAACTTGGGG...GTTAACACTTCTGTCCTCGAATTGGCCGCCTGGCTTTGTTTTCCTCCTGGCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR-3UTR CAA 90 bp | GTGGTAACACAGAAAACTGTGCAGTGTGGCTCCACACTCAAGGGACTGCCTTCTGGTACACACTTGGTGTaGTGTGTCCCTCACAGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: VVTQKTVQCGSTLKGLPSGTHLV*CVPHRF Trigger: AAACCTGTGAGGGACACACAACACCAAGTGTGTACC...AGAAGGCAGTCCCTTGAGTGTGGAGCCACACTGCACAGTTTTCTGTGTTACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR CCA 72 bp | TTCCAGAGGACCTGGGTTCAATTTCCAGCACTCTCATaGCACCTCATAGCAGTCGGTAACTCCAGTTCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: FQRTWVQFPALS*HLIAVGNSSSS Trigger: ACTGGAACTGGAGTTACCGACTGCTATGAGGTGCCATGAGAGTGCTGGAAATTGAACCCAGGTCCTCTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR CCA 72 bp | TTCTCCCACGCAACTCCTGTGAGTTCAAAGTCACCCTaGTACACACTTGGTGTTGTGTGTCCCTCACAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: FSHATPVSSKSP*YTLGVVCPSQV Trigger: AACCTGTGAGGGACACACAACACCAAGTGTGTACCAGGGTGACTTTGAACTCACAGGAGTTGCGTGGGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR CCA 72 bp | GACATTCATGGTGGTAACACAGAAAACTGTGCAGTGTaGCTCCACACTCAAGGGACTGCCTTCTGGGACAAG | + |
|
Preference number: 3 (lower is better) Translates to: DIHGGNTENCAV*LHTQGTAFWDK Trigger: CTTGTCCCAGAAGGCAGTCCCTTGAGTGTGGAGCCACACTGCACAGTTTTCTGTGTTACCACCATGAATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR CCA 72 bp | TTTAACATCTGCGGCTGCATCAAAACCCACTGCTACTaGGGACTCAGTGGGCTAAGAAACCAGGATGGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: FNICGCIKTHCY*GLSGLRNQDGE Trigger: TTCCCCATCCTGGTTTCTTAGCCCACTGAGTCCCCAGTAGCAGTGGGTTTTGATGCAGCCGCAGATGTTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR CCA 72 bp | AAAAGGATAATAAAAAGAATTACAGCCGGGCAGTGGTaGCACCCGCCTTTGATCCCAGCACTTGGGAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: KRIIKRITAGQW*HPPLIPALGRQ Trigger: CTGCCTCCCAAGTGCTGGGATCAAAGGCGGGTGCCACCACTGCCCGGCTGTAATTCTTTTTATTATCCTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR-3UTR CAA 90 bp | CTGAAAGAACCGGGTGGAAATCCCCTTCTCCCACGCAACTCCTGTGAGTTCAAAATTTGTACCTGGACCTaGCACCAAACTCTGAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LKEPGGNPLLPRNSCEFKICTWT*HQTLKV Trigger: CACCTTCAGAGTTTGGTGCAAGGTCCAGGTACAAAT...TTTGAACTCACAGGAGTTGCGTGGGAGAAGGGGATTTCCACCCGGTTCTTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR-3UTR CAA 90 bp | GGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGAAAGCCCAAGGCCCTGTTCATCCTGGATCTGTaGTTTTACACCCTGTGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: GWGFSSVVERLPRKPKALFILDL*FYTLCY Trigger: ATAACACAGGGTGTAAAACAACAGATCCAGGATGAA...CAGGGCCTTGGGCTTTCTAGGCAAGCGCTCTACCACTGAGCTAAATCCCCAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR CCA 72 bp | GGGACAAGGGCAGAGTACAAAGGGGAAAAGGGTCAGTaGAAGGAGAGTCCTGCAGAGTTGAACCTTAATACT | + |
|
Preference number: 3 (lower is better) Translates to: GTRAEYKGEKGQ*KESPAELNLNT Trigger: AGTATTAAGGTTCAACTCTGCAGGACTCTCCTTCCACTGACCCTTTTCCCCTTTGTACTCTGCCCTTGTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR CCA 72 bp | TCAAAAAGGATAATAAAAAGAATTACAGCCGGGCAGTaGTGGCACCCGCCTTTGATCCCAGCACTTGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SKRIIKRITAGQ*WHPPLIPALGR Trigger: CCTCCCAAGTGCTGGGATCAAAGGCGGGTGCCACCACTGCCCGGCTGTAATTCTTTTTATTATCCTTTTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR TCA 72 bp | ACCCTCATAGCTTCAAAGGATCTTCCCAGTTCTACCTaGGGCTCCAGTCCTTTGTGTGAGAGCTTTAGATCC | + |
|
Preference number: 3 (lower is better) Translates to: TLIASKDLPSST*GSSPLCESFRS Trigger: GGATCTAAAGCTCTCACACAAAGGACTGGAGCCTCAGGTAGAACTGGGAAGATCCTTTGAAGCTATGAGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR-3UTR CAA 90 bp | TGCTACTGGGGACTCAGTGGGCTAAGAAACCAGGATGGGGAAGACATTAATGTTGGACACATTGTGGCTTaGACTATAGAAGCTGGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: CYWGLSGLRNQDGEDINVGHIVA*TIEAGN Trigger: GTTTCCAGCTTCTATAGTCAAAGCCACAATGTGTCC...AACATTAATGTCTTCCCCATCCTGGTTTCTTAGCCCACTGAGTCCCCAGTAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR TCA 72 bp | CAGTGTCTTGCACATTCTAGACAAGTACTCTACCACTaGGCTACACCCCAGTCCTGTTCCTGTAGTCTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: QCLAHSRQVLYH*ATPQSCSCSLN Trigger: ATTCAGACTACAGGAACAGGACTGGGGTGTAGCTCAGTGGTAGAGTACTTGTCTAGAATGTGCAAGACACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR GCA 72 bp | GCTGGAAACTTTATTCGCTGGAGGTCTGATAAGCAATaGTGTCAAGTTCAAAGGTCCCAAGAGGGTCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: AGNFIRWRSDKQ*CQVQRSQEGQN Trigger: GTTCTGACCCTCTTGGGACCTTTGAACTTGACAGCATTGCTTATCAGACCTCCAGCGAATAAAGTTTCCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR-3UTR CAA 90 bp | GCCCGACTCTTTTGTCTTACAAGACAAACTTTGGACCCATTAAGCATTCCCCACAATCGTGTTTTGCTTTaGTCTTGCAGTGTTGGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: ARLFCLTRQTLDPLSIPHNRVLL*SCSVGD Trigger: GTCTCCAACACTGCAAGACAAAAGCAAAACACGATT...GTGGGGAATGCTTAATGGGTCCAAAGTTTGTCTTGTAAGACAAAAGAGTCGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR CCA 72 bp | CTCACACTGGTCTTTTCTCCAAAGCCAGGTCTCTTGTaGAGTGTGAAATATCCATATTATCTGTGTGTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LTLVFSPKPGLL*SVKYPYYLCVG Trigger: CCCTACACACAGATAATATGGATATTTCACACTCCACAAGAGACCTGGCTTTGGAGAAAAGACCAGTGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR-3UTR CAA 90 bp | GCCCGACTCTTTTGTCTTACAAGACAAACTTTGGACCCATTAAGCATTCCCCACGATGAAGATGTTTTATaGTGCAAATCCCACAGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: ARLFCLTRQTLDPLSIPHDEDVL*CKSHRG Trigger: ACCTCTGTGGGATTTGCACAATAAAACATCTTCATC...GTGGGGAATGCTTAATGGGTCCAAAGTTTGTCTTGTAAGACAAAAGAGTCGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR-3UTR CAA 90 bp | GCCCGACTCTTTTGTCTTACAAGACAAACTTTGGACCCATTAAGCATTCCCCACAGGCTACTTGAAATCTaGTCAAGGAAAGAAAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: ARLFCLTRQTLDPLSIPHRLLEI*SRKERE Trigger: TTCCCTTTCTTTCCTTGACAAGATTTCAAGTAGCCT...GTGGGGAATGCTTAATGGGTCCAAAGTTTGTCTTGTAAGACAAAAGAGTCGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR TCA 72 bp | AATCGTGTTTTGCTTTTGTCTTGCAGTGTTGGAGACTaGACCCAGTGTCTTGCACATTCTAGACAAGTACTC | + |
|
Preference number: 3 (lower is better) Translates to: NRVLLLSCSVGD*TQCLAHSRQVL Trigger: GAGTACTTGTCTAGAATGTGCAAGACACTGGGTTCAGTCTCCAACACTGCAAGACAAAAGCAAAACACGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR-3UTR CAA 90 bp | AGTCCTTTGTGTGAGAGCTTTAGATCCACTCAGCCCAGAAACAACCCTACAGATGGGATTAACAACCCATaGGATGAAGATGTTTTATTG | + |
|
Preference number: 3 (lower is better) Translates to: SPLCESFRSTQPRNNPTDGINNP*DEDVLL Trigger: CAATAAAACATCTTCATCCAATGGGTTGTTAATCCC...ATCTGTAGGGTTGTTTCTGGGCTGAGTGGATCTAAAGCTCTCACACAAAGGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| 3UTR GCA 72 bp | CCTCTACCATTTCTGTACTTCTATACAATCGTGTTTTaGTTTTGTCTTGCAGTGTTGGAGACTGAACCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: PLPFLYFYTIVF*FCLAVLETEPS Trigger: ACTGGGTTCAGTCTCCAACACTGCAAGACAAAAGCAAAACACGATTGTATAGAAGTACAGAAATGGTAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| CDS-3UTR GCA 90 bp | TCCACACTCAAGGGACTGCCTTCTGGGACAAGACATCCTGCTTCAGCGGCTGTCGGACTTGCTCGCCCTTaGCGCGAGCCAGACGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: STLKGLPSGTRHPASAAVGLARP*REPDAS Trigger: GGAGGCGTCTGGCTCGCGGCAAGGGCGAGCAAGTCC...GACAGCCGCTGAAGCAGGATGTCTTGTCCCAGAAGGCAGTCCCTTGAGTGTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| CDS-3UTR TCA 90 bp | CCAGAGGACCTGGGTTCAATTTCCAGCACTCTCATGGCACCTCATAGCAGTCGGAGGCGGCCCACCCCTTaGCCCAGGGCTAGCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: PEDLGSISSTLMAPHSSRRRPTP*PRASTQ Trigger: CTGTGTGCTAGCCCTGGGTCAAGGGGTGGGCCGCCT...CCGACTGCTATGAGGTGCCATGAGAGTGCTGGAAATTGAACCCAGGTCCTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| CDS-3UTR GCA 90 bp | TCCACACTCAAGGGACTGCCTTCTGGGACAAGACATCCTGCTTCAGCGGCTGTCGCCCTGCCAGAGACCTaGACAGCACTGCCATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: STLKGLPSGTRHPASAAVALPET*TALPWP Trigger: TGGCCATGGCAGTGCTGTGCAGGTCTCTGGCAGGGC...GACAGCCGCTGAAGCAGGATGTCTTGTCCCAGAAGGCAGTCCCTTGAGTGTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| CDS-3UTR GCA 90 bp | GTTCTTCCAGAGGACCTGGGTTCAATTTCCAGCACTCTCATGGCACCTCATAGCGCCAGCAGCGAGCAGTaGTGGCCGGCCTCCGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VLPEDLGSISSTLMAPHSASSEQ*WPASAV Trigger: CACAGCGGAGGCCGGCCAGCACTGCTCGCTGCTGGC...GCTATGAGGTGCCATGAGAGTGCTGGAAATTGAACCCAGGTCCTCTGGAAGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| CDS-3UTR GCA 90 bp | TCCACACTCAAGGGACTGCCTTCTGGGACAAGACATCCTGCTTCAGCGGCTGTCCAGACCACACAGCCCTaGCAGAGACCTGCACAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: STLKGLPSGTRHPASAAVQTTQP*QRPAQH Trigger: GTGCTGTGCAGGTCTCTGGCAGGGCTGTGTGGTCTG...GACAGCCGCTGAAGCAGGATGTCTTGTCCCAGAAGGCAGTCCCTTGAGTGTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| CDS-3UTR TCA 90 bp | TCCACACTCAAGGGACTGCCTTCTGGGACAAGACATCCTGCTTCAGCGGCTGTCTGGCTCCTGCAAAGGTaGGGCCTCTTCCTCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: STLKGLPSGTRHPASAAVWLLQR*GLFLFL Trigger: GAGGAAGAGGAAGAGGCCTCACCTTTGCAGGAGCCA...GACAGCCGCTGAAGCAGGATGTCTTGTCCCAGAAGGCAGTCCCTTGAGTGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
||
| CDS-3UTR CCA 90 bp | GGCATGGTGGTGCGCATCTGTAGTACCAGAACTCAAGGCAGGAGGATCCTTGCTCCTGAACCACTCGGATaGGGACTTGCTCGCCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GMVVRICSTRTQGRRILAPEPLG*GLARPC Trigger: GCAAGGGCGAGCAAGTCCCCATCCGAGTGGTTCAGG...AGCAAGGATCCTCCTGCCTTGAGTTCTGGTACTACAGATGCGCACCACCATGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| CDS-3UTR CCA 90 bp | AAGGCCGCGCAGCTCCAATCTATCCCTGGGTCTGGGCCTGCTCTTTGGTCCTCATTCCTCCTCTGTTCCTaGTGTTTCTACCCGAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: KAAQLQSIPGSGPALWSSFLLCS*CFYPKP Trigger: GGGCTTCGGGTAGAAACACCAGGAACAGAGGAGGAA...TGAGGACCAAAGAGCAGGCCCAGACCCAGGGATAGATTGGAGCTGCGCGGCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR CAA 72 bp | CCTTGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTaGCCTAGAAAGCCCAAGGCCCTGGGTTCGATCCTC | + |
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Preference number: 4 (lower is better) Translates to: PWGWGFSSVVER*PRKPKALGSIL Trigger: GAGGATCGAACCCAGGGCCTTGGGCTTTCTAGGCAAGCGCTCTACCACTGAGCTAAATCCCCAACCCCAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| CDS-3UTR TCA 90 bp | CTGAAAGAACCGGGTGGAAATCCCCTTCTCCCACGCAACTCCTGTGAGTTCAAAAGCAGAGAGCCCACCTaGATAGCCACGCCAGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: LKEPGGNPLLPRNSCEFKSREPT*IATPAA Trigger: CGCTGCTGGCGTGGCTATTCAGGTGGGCTCTCTGCT...TTTGAACTCACAGGAGTTGCGTGGGAGAAGGGGATTTCCACCCGGTTCTTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR CAA 72 bp | TCTGGGACAAGACATCCTGCTTCAGCGGCTGTCTTCTaGTGGGGTATCTTCCAACACGCTCCCCCAGACCAG | + |
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Preference number: 4 (lower is better) Translates to: SGTRHPASAAVF*WGIFQHAPPDQ Trigger: CTGGTCTGGGGGAGCGTGTTGGAAGATACCCCACAAGAAGACAGCCGCTGAAGCAGGATGTCTTGTCCCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| CDS-3UTR GCA 90 bp | CACCCTGGTACACACTTGGTGTTGTGTGTCCCTCACAGGTTTCTCTCTCTAGTCGGCCTGTGCCCACTATaGCTAGCCCCTGAACCACTC | + |
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Preference number: 4 (lower is better) Translates to: HPGTHLVLCVPHRFLSLVGLCPL*LAPEPL Trigger: GAGTGGTTCAGGGGCTAGGCATAGTGGGCACAGGCC...GACTAGAGAGAGAAACCTGTGAGGGACACACAACACCAAGTGTGTACCAGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| CDS-3UTR GCA 90 bp | GATAATAAAAAGAATTACAGCCGGGCAGTGGTGGCACCCGCCTTTGATCCCAGCTGGCCTGGTGGCTCCTaGAAAGGTGAGGCCTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: DNKKNYSRAVVAPAFDPSWPGGS*KGEASS Trigger: GGAAGAGGCCTCACCTTTGCAGGAGCCACCAGGCCA...GCTGGGATCAAAGGCGGGTGCCACCACTGCCCGGCTGTAATTCTTTTTATTATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| CDS-3UTR GCA 90 bp | AATAAAAAGAATTACAGCCGGGCAGTGGTGGCACCCGCCTTTGATCCCAGCACTGCTGGAAACAATGCCTaGCACCTGGCCTGGTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: NKKNYSRAVVAPAFDPSTAGNNA*HLAWWL Trigger: GAGCCACCAGGCCAGGTGGCAGGCATTGTTTCCAGC...AGTGCTGGGATCAAAGGCGGGTGCCACCACTGCCCGGCTGTAATTCTTTTTATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| CDS-3UTR GCA 90 bp | CACCCTGGTACACACTTGGTGTTGTGTGTCCCTCACAGGTTTCTCTCTCTAGTCCTGGGCTGGAAACAATaGCTGCCACCTGGCCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: HPGTHLVLCVPHRFLSLVLGWKQ*LPPGLV Trigger: CACCAGGCCAGGTGGCAGGCATTGTTTCCAGCCCAG...GACTAGAGAGAGAAACCTGTGAGGGACACACAACACCAAGTGTGTACCAGGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| CDS-3UTR GCA 90 bp | GCTAATGCTCCACACCCCCTCTTGTCTTCCAGTATCATAGAAATTAGGGCGCTCCCACACCTGCAGAGGTaGCCACCAGAGGAGGACAGG | + |
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Preference number: 4 (lower is better) Translates to: ANAPHPLLSSSIIEIRALPHLQR*PPEEDR Trigger: CCTGTCCTCCTCTGGTGGGCACCTCTGCAGGTGTGG...GAGCGCCCTAATTTCTATGATACTGGAAGACAAGAGGGGGTGTGGAGCATTAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| CDS-3UTR CCA 90 bp | CACCCTGGTACACACTTGGTGTTGTGTGTCCCTCACAGGTTTCTCTCTCTAGTCCGATCGGAGGCCCAGTaGTCCTGTTGGCAGGCACAT | + |
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Preference number: 4 (lower is better) Translates to: HPGTHLVLCVPHRFLSLVRSEAQ*SCWQAH Trigger: ATGTGCCTGCCAACAGGACCACTGGGCCTCCGATCG...GACTAGAGAGAGAAACCTGTGAGGGACACACAACACCAAGTGTGTACCAGGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| CDS-3UTR CCA 90 bp | GAGGCCAGGAGGAAAACAAAGCCAGGCGGCCAATTCGAGGACAGAAGTGTTAACACAATGCCTGCCACCTaGCCTGGTGGCTCCTGCAAA | + |
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Preference number: 4 (lower is better) Translates to: EARRKTKPGGQFEDRSVNTMPAT*PGGSCK Trigger: TTTGCAGGAGCCACCAGGCCAGGTGGCAGGCATTGT...GTTAACACTTCTGTCCTCGAATTGGCCGCCTGGCTTTGTTTTCCTCCTGGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR CAA 72 bp | CATTATCCTGCTTCAGCCCCACATGGGCCCTGGGAGTaGGCCTTCAGCTACCGAAGTAGTCCCAGAAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: HYPASAPHGPWE*AFSYRSSPRKA Trigger: TGCTTTTCTGGGACTACTTCGGTAGCTGAAGGCCAACTCCCAGGGCCCATGTGGGGCTGAAGCAGGATAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| CDS-3UTR CCA 90 bp | AATAAAAAGAATTACAGCCGGGCAGTGGTGGCACCCGCCTTTGATCCCAGCACTAGCAGGCAAGGGGGTTaGCACAGCTACCCAGTACGA | + |
|
Preference number: 4 (lower is better) Translates to: NKKNYSRAVVAPAFDPSTSRQGG*HSYPVR Trigger: TCGTACTGGGTAGCTGTGCCAACCCCCTTGCCTGCT...AGTGCTGGGATCAAAGGCGGGTGCCACCACTGCCCGGCTGTAATTCTTTTTATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| CDS-3UTR CCA 90 bp | GCTAATGCTCCACACCCCCTCTTGTCTTCCAGTATCATAGAAATTAGGGCGCTCGCCCTGTACCTGTTGTaGGTTCAGATGTCGGGGATG | + |
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Preference number: 4 (lower is better) Translates to: ANAPHPLLSSSIIEIRALALYLL*VQMSGM Trigger: CATCCCCGACATCTGAACCCACAACAGGTACAGGGC...GAGCGCCCTAATTTCTATGATACTGGAAGACAAGAGGGGGTGTGGAGCATTAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| CDS-3UTR GCA 90 bp | AGACAGCTAGCTATGTGTCTACCTAAAGGGACACATTGTGGCTTTGACTATAGACTGTTGGCAGGCACATaGAGGCACTCAAGGCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: RQLAMCLPKGTHCGFDYRLLAGT*RHSRRP Trigger: GGGCCGCCTTGAGTGCCTGCATGTGCCTGCCAACAG...TCTATAGTCAAAGCCACAATGTGTCCCTTTAGGTAGACACATAGCTAGCTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| CDS-3UTR GCA 90 bp | GTTCTTCCAGAGGACCTGGGTTCAATTTCCAGCACTCTCATGGCACCTCATAGCCACAGTCCTTTCCGCTaGGAAATACTCGGTAGATGC | + |
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Preference number: 4 (lower is better) Translates to: VLPEDLGSISSTLMAPHSHSPFR*EILGRC Trigger: GCATCTACCGAGTATTTCGCAGCGGAAAGGACTGTG...GCTATGAGGTGCCATGAGAGTGCTGGAAATTGAACCCAGGTCCTCTGGAAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR CAA 72 bp | AACCCTACAGATGCCACAGGGCAAAGGCCCAGGAGTTaGAGTGGAAGACAGCTAGCTATGTGTCTACCTAAA | + |
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Preference number: 4 (lower is better) Translates to: NPTDATGQRPRS*SGRQLAMCLPK Trigger: TTTAGGTAGACACATAGCTAGCTGTCTTCCACTCAAACTCCTGGGCCTTTGCCCTGTGGCATCTGTAGGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR CAA 72 bp | CATGGGATTAACAACCCATTGGATGAAGATGTTTTATaGTGCAAATCCCACAGAGGTCCCAGGGGTGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: HGINNPLDEDVL*CKSHRGPRGEG Trigger: GCCTTCACCCCTGGGACCTCTGTGGGATTTGCACAATAAAACATCTTCATCCAATGGGTTGTTAATCCCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR CAA 72 bp | GACTTGGTAAACAGCCTTACCTTCATCCTGGATCTGTaGTTTTACACCCTGTGTTATTTTGACCCTTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: DLVNSLTFILDL*FYTLCYFDPCP Trigger: GGGGCAAGGGTCAAAATAACACAGGGTGTAAAACAACAGATCCAGGATGAAGGTAAGGCTGTTTACCAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR CAA 72 bp | TTTTGTCTTGCAGTGTTGGAGACTGAACCCAGTGTCTaGCACATTCTAGACAAGTACTCTACCACTGAGCTA | + |
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Preference number: 4 (lower is better) Translates to: FCLAVLETEPSV*HILDKYSTTEL Trigger: TAGCTCAGTGGTAGAGTACTTGTCTAGAATGTGCAAGACACTGGGTTCAGTCTCCAACACTGCAAGACAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR CAA 72 bp | TTCTATACAATCGTGTTTTGCTTTTGTCTTGCAGTGTaGGAGACTGAACCCAGTGTCTTGCACATTCTAGAC | + |
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Preference number: 4 (lower is better) Translates to: FYTIVFCFCLAV*ETEPSVLHILD Trigger: GTCTAGAATGTGCAAGACACTGGGTTCAGTCTCCAACACTGCAAGACAAAAGCAAAACACGATTGTATAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| 3UTR CAA 72 bp | TTCTGTACTTCTATACAATCGTGTTTTGCTTTTGTCTaGCAGTGTTGGAGACTGAACCCAGTGTCTTGCACA | + |
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Preference number: 4 (lower is better) Translates to: FCTSIQSCFAFV*QCWRLNPVSCT Trigger: TGTGCAAGACACTGGGTTCAGTCTCCAACACTGCAAGACAAAAGCAAAACACGATTGTATAGAAGTACAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| CDS-3UTR CAA 90 bp | CACTCAAGGGACTGCCTTCTGGGACAAGACATCCTGCTTCAGCGGCTGTCTTCTGGCCCAGTGGTCCTGTaGGCAGGCACATGCAGGCAC | + |
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Preference number: 5 (lower is better) Translates to: HSRDCLLGQDILLQRLSSGPVVL*AGTCRH Trigger: GTGCCTGCATGTGCCTGCCAACAGGACCACTGGGCC...AGAAGACAGCCGCTGAAGCAGGATGTCTTGTCCCAGAAGGCAGTCCCTTGAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| CDS-3UTR CAA 90 bp | GTGGTAACACAGAAAACTGTGCAGTGTGGCTCCACACTCAAGGGACTGCCTTCTCACTCGGATGGGGACTaGCTCGCCCTTGCCGCGAGC | + |
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Preference number: 5 (lower is better) Translates to: VVTQKTVQCGSTLKGLPSHSDGD*LALAAS Trigger: GCTCGCGGCAAGGGCGAGCAAGTCCCCATCCGAGTG...AGAAGGCAGTCCCTTGAGTGTGGAGCCACACTGCACAGTTTTCTGTGTTACCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| CDS-3UTR CAA 90 bp | GCCCGACTCTTTTGTCTTACAAGACAAACTTTGGACCCATTAAGCATTCCCCACGGGACTTGCTCGCCCTaGCCGCGAGCCAGACGCCTC | + |
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Preference number: 5 (lower is better) Translates to: ARLFCLTRQTLDPLSIPHGTCSP*PRARRL Trigger: GAGGCGTCTGGCTCGCGGCAAGGGCGAGCAAGTCCC...GTGGGGAATGCTTAATGGGTCCAAAGTTTGTCTTGTAAGACAAAAGAGTCGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| CDS CCA 90 bp | CCTCCTCTGTTCCTGGTGTTTCTACCCGAAGCCCTGTACCTGTTGTaGGTTCAGATGTCGGGGATGGCAGTAGTAACAGGAGGCCTTGGA | + |
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Preference number: 5 (lower is better) Translates to: PPLFLVFLPEALYLL*VQMSGMAVVTGGLG Trigger: TCCAAGGCCTCCTGTTACTACTGCCATCCCCGACATCTGAACCCACAACAGGTACAGGGCTTCGGGTAGAAACACCAGGAACAGAGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| CDS-3UTR CAA 90 bp | GCTAATGCTCCACACCCCCTCTTGTCTTCCAGTATCATAGAAATTAGGGCGCTCCCATTGGTCAGAGCATaGGTGATGGCCAGCAGGCCC | + |
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Preference number: 5 (lower is better) Translates to: ANAPHPLLSSSIIEIRALPLVRA*VMASRP Trigger: GGGCCTGCTGGCCATCACCAATGCTCTGACCAATGG...GAGCGCCCTAATTTCTATGATACTGGAAGACAAGAGGGGGTGTGGAGCATTAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| CDS CCA 72 bp | TGGGAGACACCTCGATCGGAGGCCCAGTGGTCCTGTTaGCAGGCACATGCAGGCACTCAAGGCGGCCCACCC | + |
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Preference number: 6 (lower is better) Translates to: WETPRSEAQWSC*QAHAGTQGGPP Trigger: GGGTGGGCCGCCTTGAGTGCCTGCATGTGCCTGCCAACAGGACCACTGGGCCTCCGATCGAGGTGTCTCCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| CDS GCA 72 bp | CCCATGAGAGTACCACGAGGACCACACCTGCAGAGGTaGCCACCAGAGGAGGACAGGGACTTAAGGCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: PMRVPRGPHLQR*PPEEDRDLRLP Trigger: TGGCAGCCTTAAGTCCCTGTCCTCCTCTGGTGGGCACCTCTGCAGGTGTGGTCCTCGTGGTACTCTCATGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| CDS TCA 72 bp | CTTGATATACGAGAACGTGCCTGCGCACAGGACCCATaGGAGTACCACGAGGACCACACCTGCAGAGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: LDIRERACAQDP*EYHEDHTCRGA Trigger: GGCACCTCTGCAGGTGTGGTCCTCGTGGTACTCTCATGGGTCCTGTGCGCAGGCACGTTCTCGTATATCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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| CDS CAA 90 bp | CTTCCTCCTCTGTTCCTGGTGTTTCTACCCGAAGCCCTGTACCTGTaGTGGGTTCAGATGTCGGGGATGGCAGTAGTAACAGGAGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: LPPLFLVFLPEALYL*WVQMSGMAVVTGGL Trigger: AAGGCCTCCTGTTACTACTGCCATCCCCGACATCTGAACCCACAACAGGTACAGGGCTTCGGGTAGAAACACCAGGAACAGAGGAGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023220.10 |
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