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Pregenerated sensors for SLC51B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000053862

Ensembl transcript IDs: ENSMUST00000065894.7

Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp GATGCTCCTTCTCAGGAGGAACATGCTTGTCATGACCACCAGGACTaGCAGGACCAGGATGGAATAATTCCAAGGAGCCGCATCTTCTGC +
Preference number: 5 (lower is better)
Translates to: DAPSQEEHACHDHQD*QDQDGIIPRSRIFC
Trigger: GCAGAAGATGCGGCTCCTTGGAATTATTCCATCCTGGTCCTGGCAGTCCTGGTGGTCATGACAAGCATGTTCCTCCTGAGAAGGAGCATC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065894.7
CDS CCA 90 bp GCATCTTCTGCACGAAAATACCAAAGCATTTCTTCCAGCAGTTCCTaGGGCACCTCGGCATTGGCTGCAGCTTTCTCTGCACTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: ASSARKYQSISSSSS*GTSALAAAFSALWS
Trigger: GGACCACAGTGCAGAGAAAGCTGCAGCCAATGCCGAGGTGCCCCAGGAACTGCTGGAAGAAATGCTTTGGTATTTTCGTGCAGAAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065894.7
CDS GCA 90 bp GACTGCCAGGACCAGGATGGAATAATTCCAAGGAGCCGCATCTTCTaGACGAAAATACCAAAGCATTTCTTCCAGCAGTTCCTGGGGCAC +
Preference number: 5 (lower is better)
Translates to: DCQDQDGIIPRSRIF*TKIPKHFFQQFLGH
Trigger: GTGCCCCAGGAACTGCTGGAAGAAATGCTTTGGTATTTTCGTGCAGAAGATGCGGCTCCTTGGAATTATTCCATCCTGGTCCTGGCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065894.7
CDS GCA 90 bp GAGTCATCAAGATGCAGGTCTTCTGGTGTTTCTTTGTCTTGTGGCTaGTTCTTTCGATTTCTGTTTGCCAGGATGCTCCTTCTCAGGAGG +
Preference number: 5 (lower is better)
Translates to: ESSRCRSSGVSLSCG*FFRFLFARMLLLRR
Trigger: CCTCCTGAGAAGGAGCATCCTGGCAAACAGAAATCGAAAGAAGCAGCCACAAGACAAAGAAACACCAGAAGACCTGCATCTTGATGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065894.7
CDS GCA 90 bp AGGAAGACCTGGCTGTTGTTCTCTTTCATTATGGAGTCATCAAGATaGAGGTCTTCTGGTGTTTCTTTGTCTTGTGGCTGCTTCTTTCGA +
Preference number: 5 (lower is better)
Translates to: RKTWLLFSFIMESSR*RSSGVSLSCGCFFR
Trigger: TCGAAAGAAGCAGCCACAAGACAAAGAAACACCAGAAGACCTGCATCTTGATGACTCCATAATGAAAGAGAACAACAGCCAGGTCTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065894.7
CDS CCA 90 bp GCTGTTGTTCTCTTTCATTATGGAGTCATCAAGATGCAGGTCTTCTaGTGTTTCTTTGTCTTGTGGCTGCTTCTTTCGATTTCTGTTTGC +
Preference number: 5 (lower is better)
Translates to: AVVLFHYGVIKMQVF*CFFVLWLLLSISVC
Trigger: GCAAACAGAAATCGAAAGAAGCAGCCACAAGACAAAGAAACACCAGAAGACCTGCATCTTGATGACTCCATAATGAAAGAGAACAACAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065894.7
CDS CCA 90 bp TCAATGTCTCTCTTAGGAAGACCTGGCTGTTGTTCTCTTTCATTATaGAGTCATCAAGATGCAGGTCTTCTGGTGTTTCTTTGTCTTGTG +
Preference number: 5 (lower is better)
Translates to: SMSLLGRPGCCSLSL*SHQDAGLLVFLCLV
Trigger: CACAAGACAAAGAAACACCAGAAGACCTGCATCTTGATGACTCCATAATGAAAGAGAACAACAGCCAGGTCTTCCTAAGAGAGACATTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065894.7
CDS GCA 72 bp TCTCAGGAGGAACATGCTTGTCATGACCACCAGGACTaGCAGGACCAGGATGGAATAATTCCAAGGAGCCGC +
Preference number: 6 (lower is better)
Translates to: SQEEHACHDHQD*QDQDGIIPRSR
Trigger: GCGGCTCCTTGGAATTATTCCATCCTGGTCCTGGCAGTCCTGGTGGTCATGACAAGCATGTTCCTCCTGAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065894.7
CDS TCA 72 bp CCAGGATGCTCCTTCTCAGGAGGAACATGCTTGTCATaGCCACCAGGACTGCCAGGACCAGGATGGAATAAT +
Preference number: 6 (lower is better)
Translates to: PGCSFSGGTCLS*PPGLPGPGWNN
Trigger: ATTATTCCATCCTGGTCCTGGCAGTCCTGGTGGTCATGACAAGCATGTTCCTCCTGAGAAGGAGCATCCTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065894.7
CDS CCA 72 bp GCACGAAAATACCAAAGCATTTCTTCCAGCAGTTCCTaGGGCACCTCGGCATTGGCTGCAGCTTTCTCTGCA +
Preference number: 6 (lower is better)
Translates to: ARKYQSISSSSS*GTSALAAAFSA
Trigger: TGCAGAGAAAGCTGCAGCCAATGCCGAGGTGCCCCAGGAACTGCTGGAAGAAATGCTTTGGTATTTTCGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065894.7
CDS GCA 72 bp TGGCTGTTGTTCTCTTTCATTATGGAGTCATCAAGATaGAGGTCTTCTGGTGTTTCTTTGTCTTGTGGCTGC +
Preference number: 6 (lower is better)
Translates to: WLLFSFIMESSR*RSSGVSLSCGC
Trigger: GCAGCCACAAGACAAAGAAACACCAGAAGACCTGCATCTTGATGACTCCATAATGAAAGAGAACAACAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065894.7
CDS CCA 72 bp ATCAAGATGCAGGTCTTCTGGTGTTTCTTTGTCTTGTaGCTGCTTCTTTCGATTTCTGTTTGCCAGGATGCT +
Preference number: 6 (lower is better)
Translates to: IKMQVFWCFFVL*LLLSISVCQDA
Trigger: AGCATCCTGGCAAACAGAAATCGAAAGAAGCAGCCACAAGACAAAGAAACACCAGAAGACCTGCATCTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065894.7
CDS CAA 90 bp TCTGGTTTCTCTGAGATCAATGTCTCTCTTAGGAAGACCTGGCTGTaGTTCTCTTTCATTATGGAGTCATCAAGATGCAGGTCTTCTGGT +
Preference number: 6 (lower is better)
Translates to: SGFSEINVSLRKTWL*FSFIMESSRCRSSG
Trigger: ACCAGAAGACCTGCATCTTGATGACTCCATAATGAAAGAGAACAACAGCCAGGTCTTCCTAAGAGAGACATTGATCTCAGAGAAACCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065894.7
CDS CCA 72 bp CTCTTAGGAAGACCTGGCTGTTGTTCTCTTTCATTATaGAGTCATCAAGATGCAGGTCTTCTGGTGTTTCTT +
Preference number: 6 (lower is better)
Translates to: LLGRPGCCSLSL*SHQDAGLLVFL
Trigger: AAGAAACACCAGAAGACCTGCATCTTGATGACTCCATAATGAAAGAGAACAACAGCCAGGTCTTCCTAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065894.7
CDS CCA 72 bp GGTTTCTCTGAGATCAATGTCTCTCTTAGGAAGACCTaGCTGTTGTTCTCTTTCATTATGGAGTCATCAAGA +
Preference number: 6 (lower is better)
Translates to: GFSEINVSLRKT*LLFSFIMESSR
Trigger: TCTTGATGACTCCATAATGAAAGAGAACAACAGCCAGGTCTTCCTAAGAGAGACATTGATCTCAGAGAAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065894.7