Pregenerated sensors for SLC51B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053862Ensembl transcript IDs: ENSMUST00000065894.7
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS GCA 90 bp | GATGCTCCTTCTCAGGAGGAACATGCTTGTCATGACCACCAGGACTaGCAGGACCAGGATGGAATAATTCCAAGGAGCCGCATCTTCTGC | + |
Preference number: 5 (lower is better) Translates to: DAPSQEEHACHDHQD*QDQDGIIPRSRIFC Trigger: GCAGAAGATGCGGCTCCTTGGAATTATTCCATCCTGGTCCTGGCAGTCCTGGTGGTCATGACAAGCATGTTCCTCCTGAGAAGGAGCATC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065894.7 |
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CDS CCA 90 bp | GCATCTTCTGCACGAAAATACCAAAGCATTTCTTCCAGCAGTTCCTaGGGCACCTCGGCATTGGCTGCAGCTTTCTCTGCACTGTGGTCC | + |
Preference number: 5 (lower is better) Translates to: ASSARKYQSISSSSS*GTSALAAAFSALWS Trigger: GGACCACAGTGCAGAGAAAGCTGCAGCCAATGCCGAGGTGCCCCAGGAACTGCTGGAAGAAATGCTTTGGTATTTTCGTGCAGAAGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065894.7 |
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CDS GCA 90 bp | GACTGCCAGGACCAGGATGGAATAATTCCAAGGAGCCGCATCTTCTaGACGAAAATACCAAAGCATTTCTTCCAGCAGTTCCTGGGGCAC | + |
Preference number: 5 (lower is better) Translates to: DCQDQDGIIPRSRIF*TKIPKHFFQQFLGH Trigger: GTGCCCCAGGAACTGCTGGAAGAAATGCTTTGGTATTTTCGTGCAGAAGATGCGGCTCCTTGGAATTATTCCATCCTGGTCCTGGCAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065894.7 |
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CDS GCA 90 bp | GAGTCATCAAGATGCAGGTCTTCTGGTGTTTCTTTGTCTTGTGGCTaGTTCTTTCGATTTCTGTTTGCCAGGATGCTCCTTCTCAGGAGG | + |
Preference number: 5 (lower is better) Translates to: ESSRCRSSGVSLSCG*FFRFLFARMLLLRR Trigger: CCTCCTGAGAAGGAGCATCCTGGCAAACAGAAATCGAAAGAAGCAGCCACAAGACAAAGAAACACCAGAAGACCTGCATCTTGATGACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065894.7 |
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CDS GCA 90 bp | AGGAAGACCTGGCTGTTGTTCTCTTTCATTATGGAGTCATCAAGATaGAGGTCTTCTGGTGTTTCTTTGTCTTGTGGCTGCTTCTTTCGA | + |
Preference number: 5 (lower is better) Translates to: RKTWLLFSFIMESSR*RSSGVSLSCGCFFR Trigger: TCGAAAGAAGCAGCCACAAGACAAAGAAACACCAGAAGACCTGCATCTTGATGACTCCATAATGAAAGAGAACAACAGCCAGGTCTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065894.7 |
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CDS CCA 90 bp | GCTGTTGTTCTCTTTCATTATGGAGTCATCAAGATGCAGGTCTTCTaGTGTTTCTTTGTCTTGTGGCTGCTTCTTTCGATTTCTGTTTGC | + |
Preference number: 5 (lower is better) Translates to: AVVLFHYGVIKMQVF*CFFVLWLLLSISVC Trigger: GCAAACAGAAATCGAAAGAAGCAGCCACAAGACAAAGAAACACCAGAAGACCTGCATCTTGATGACTCCATAATGAAAGAGAACAACAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065894.7 |
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CDS CCA 90 bp | TCAATGTCTCTCTTAGGAAGACCTGGCTGTTGTTCTCTTTCATTATaGAGTCATCAAGATGCAGGTCTTCTGGTGTTTCTTTGTCTTGTG | + |
Preference number: 5 (lower is better) Translates to: SMSLLGRPGCCSLSL*SHQDAGLLVFLCLV Trigger: CACAAGACAAAGAAACACCAGAAGACCTGCATCTTGATGACTCCATAATGAAAGAGAACAACAGCCAGGTCTTCCTAAGAGAGACATTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065894.7 |
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CDS GCA 72 bp | TCTCAGGAGGAACATGCTTGTCATGACCACCAGGACTaGCAGGACCAGGATGGAATAATTCCAAGGAGCCGC | + |
Preference number: 6 (lower is better) Translates to: SQEEHACHDHQD*QDQDGIIPRSR Trigger: GCGGCTCCTTGGAATTATTCCATCCTGGTCCTGGCAGTCCTGGTGGTCATGACAAGCATGTTCCTCCTGAGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065894.7 |
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CDS TCA 72 bp | CCAGGATGCTCCTTCTCAGGAGGAACATGCTTGTCATaGCCACCAGGACTGCCAGGACCAGGATGGAATAAT | + |
Preference number: 6 (lower is better) Translates to: PGCSFSGGTCLS*PPGLPGPGWNN Trigger: ATTATTCCATCCTGGTCCTGGCAGTCCTGGTGGTCATGACAAGCATGTTCCTCCTGAGAAGGAGCATCCTGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065894.7 |
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CDS CCA 72 bp | GCACGAAAATACCAAAGCATTTCTTCCAGCAGTTCCTaGGGCACCTCGGCATTGGCTGCAGCTTTCTCTGCA | + |
Preference number: 6 (lower is better) Translates to: ARKYQSISSSSS*GTSALAAAFSA Trigger: TGCAGAGAAAGCTGCAGCCAATGCCGAGGTGCCCCAGGAACTGCTGGAAGAAATGCTTTGGTATTTTCGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065894.7 |
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CDS GCA 72 bp | TGGCTGTTGTTCTCTTTCATTATGGAGTCATCAAGATaGAGGTCTTCTGGTGTTTCTTTGTCTTGTGGCTGC | + |
Preference number: 6 (lower is better) Translates to: WLLFSFIMESSR*RSSGVSLSCGC Trigger: GCAGCCACAAGACAAAGAAACACCAGAAGACCTGCATCTTGATGACTCCATAATGAAAGAGAACAACAGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065894.7 |
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CDS CCA 72 bp | ATCAAGATGCAGGTCTTCTGGTGTTTCTTTGTCTTGTaGCTGCTTCTTTCGATTTCTGTTTGCCAGGATGCT | + |
Preference number: 6 (lower is better) Translates to: IKMQVFWCFFVL*LLLSISVCQDA Trigger: AGCATCCTGGCAAACAGAAATCGAAAGAAGCAGCCACAAGACAAAGAAACACCAGAAGACCTGCATCTTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065894.7 |
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CDS CAA 90 bp | TCTGGTTTCTCTGAGATCAATGTCTCTCTTAGGAAGACCTGGCTGTaGTTCTCTTTCATTATGGAGTCATCAAGATGCAGGTCTTCTGGT | + |
Preference number: 6 (lower is better) Translates to: SGFSEINVSLRKTWL*FSFIMESSRCRSSG Trigger: ACCAGAAGACCTGCATCTTGATGACTCCATAATGAAAGAGAACAACAGCCAGGTCTTCCTAAGAGAGACATTGATCTCAGAGAAACCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065894.7 |
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CDS CCA 72 bp | CTCTTAGGAAGACCTGGCTGTTGTTCTCTTTCATTATaGAGTCATCAAGATGCAGGTCTTCTGGTGTTTCTT | + |
Preference number: 6 (lower is better) Translates to: LLGRPGCCSLSL*SHQDAGLLVFL Trigger: AAGAAACACCAGAAGACCTGCATCTTGATGACTCCATAATGAAAGAGAACAACAGCCAGGTCTTCCTAAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065894.7 |
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CDS CCA 72 bp | GGTTTCTCTGAGATCAATGTCTCTCTTAGGAAGACCTaGCTGTTGTTCTCTTTCATTATGGAGTCATCAAGA | + |
Preference number: 6 (lower is better) Translates to: GFSEINVSLRKT*LLFSFIMESSR Trigger: TCTTGATGACTCCATAATGAAAGAGAACAACAGCCAGGTCTTCCTAAGAGAGACATTGATCTCAGAGAAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065894.7 |