Pregenerated sensors for SLC51A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035699Ensembl transcript IDs: ENSMUST00000042042.9, ENSMUST00000231690.2
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTCCCAATAGTCAACTGATGCTCCTAAGGAGAGAAGGATTCCAGTaGAGAGCCAAGCTTGGGGAAGCTGGGCTGGTGCTGTTGTGCCCG | + |
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Preference number: 1 (lower is better) Translates to: PPNSQLMLLRREGFQ*RAKLGEAGLVLLCP Trigger: CGGGCACAACAGCACCAGCCCAGCTTCCCCAAGCTTGGCTCTGCACTGGAATCCTTCTCTCCTTAGGAGCATCAGTTGACTATTGGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| 3UTR TCA 90 bp | GTATGTCTTCCAGGGTCCAAGCCACTCTCCTCAGGCTTTGAGTGCTaGGTCCAGGTCTGGCAGCGAACAAGCCTCATACCCAACCTTGTC | + |
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Preference number: 1 (lower is better) Translates to: VCLPGSKPLSSGFEC*VQVWQRTSLIPNLV Trigger: GACAAGGTTGGGTATGAGGCTTGTTCGCTGCCAGACCTGGACTCAGCACTCAAAGCCTGAGGAGAGTGGCTTGGACCCTGGAAGACATAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231690.2 |
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| 3UTR TCA 90 bp | GAGTACAGTATGTCTTCCAGGGTCCAAGCCACTCTCCTCAGGCTTTaGGTGCTGAGTCCAGGTCTGGCAGCGAACAAGCCTCATACCCAA | + |
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Preference number: 1 (lower is better) Translates to: EYSMSSRVQATLLRL*VLSPGLAANKPHTQ Trigger: TTGGGTATGAGGCTTGTTCGCTGCCAGACCTGGACTCAGCACTCAAAGCCTGAGGAGAGTGGCTTGGACCCTGGAAGACATACTGTACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231690.2 |
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| 3UTR GCA 90 bp | CAAGCGATCTGCCCACTGTTAGCCAAGATGGAGAAAATGGCAGGCTaGAGGGCGGTCAGGATGACAAGCACCTGGAACAGAGCAAACTTG | + |
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Preference number: 1 (lower is better) Translates to: QAICPLLAKMEKMAG*RAVRMTSTWNRANL Trigger: CAAGTTTGCTCTGTTCCAGGTGCTTGTCATCCTGACCGCCCTGCAGCCTGCCATTTTCTCCATCTTGGCTAACAGTGGGCAGATCGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231690.2 |
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| 3UTR CCA 90 bp | ACAGAGCAAACTTGGATCCCATGTTCTGTTCACCCAGATGCATCTTaGCTTGACGGAAAAGGATGGCCAGGGACCAGAGGGCCAGAAGGG | + |
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Preference number: 1 (lower is better) Translates to: TEQTWIPCSVHPDAS*LDGKGWPGTRGPEG Trigger: CCCTTCTGGCCCTCTGGTCCCTGGCCATCCTTTTCCGTCAAGCCAAGATGCATCTGGGTGAACAGAACATGGGATCCAAGTTTGCTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231690.2 |
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| 3UTR TCA 90 bp | GTGGCAGTTCATCACTTGAGACCTGATTTTAGAAGAGTAGGGAGGTaGGCAAGCGATCTGCCCACTGTTAGCCAAGATGGAGAAAATGGC | + |
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Preference number: 1 (lower is better) Translates to: VAVHHLRPDFRRVGR*ASDLPTVSQDGENG Trigger: GCCATTTTCTCCATCTTGGCTAACAGTGGGCAGATCGCTTGCTCACCTCCCTACTCTTCTAAAATCAGGTCTCAAGTGATGAACTGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231690.2 |
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| 3UTR CCA 90 bp | AGAAAACACTGTTGGAAAGAGTCACCCATGACATTACCAGTGCAATaGGGAGTTTGCCTCCGAGTTCAGTGTCTCACGTTACTGTCTAAT | + |
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Preference number: 1 (lower is better) Translates to: RKHCWKESPMTLPVQ*GVCLRVQCLTLLSN Trigger: ATTAGACAGTAACGTGAGACACTGAACTCGGAGGCAAACTCCCCATTGCACTGGTAATGTCATGGGTGACTCTTTCCAACAGTGTTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| 3UTR TCA 90 bp | CCTATTGGAGAAAGTGACTGTTCTGAACAGTTAGAGTTGGTTGGCTaGGTGTTTTGCATCAAGGCTCCTGAACAGAAAACACTGTTGGAA | + |
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Preference number: 1 (lower is better) Translates to: PIGESDCSEQLELVG*VFCIKAPEQKTLLE Trigger: TTCCAACAGTGTTTTCTGTTCAGGAGCCTTGATGCAAAACACTCAGCCAACCAACTCTAACTGTTCAGAACAGTCACTTTCTCCAATAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| 3UTR TCA 90 bp | TGTGTCTTGTGCAAGCGTCTCAGCTTTCACCATTTATTACAAAAATaGGAAAGACTCAAAACAGGTTCAACCCACTGCACTTTACCTTCA | + |
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Preference number: 1 (lower is better) Translates to: CVLCKRLSFHHLLQK*ERLKTGSTHCTLPS Trigger: TGAAGGTAAAGTGCAGTGGGTTGAACCTGTTTTGAGTCTTTCTCATTTTTGTAATAAATGGTGAAAGCTGAGACGCTTGCACAAGACACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| 3UTR CCA 90 bp | TTCAGTGTCTCACGTTACTGTCTAATACTTTGTGCAGAATTGTATTaGCTTTTGTCATTCAGCCAAATAAAGGCCATGTGTTTTTGCCTG | + |
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Preference number: 1 (lower is better) Translates to: FSVSRYCLILCAELY*LLSFSQIKAMCFCL Trigger: CAGGCAAAAACACATGGCCTTTATTTGGCTGAATGACAAAAGCCAATACAATTCTGCACAAAGTATTAGACAGTAACGTGAGACACTGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| 3UTR-3UTR CCA 90 bp | CTTCATCCCTATAGTCACATGGAAGCTGCCAGCCTGCTCTGCCAGGGGGAGCCTCAAGCTTGGGGAAGCTaGGCTGGTGCTGTTGTGCCC | + |
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Preference number: 2 (lower is better) Translates to: LHPYSHMEAASLLCQGEPQAWGS*AGAVVP Trigger: GGGCACAACAGCACCAGCCCAGCTTCCCCAAGCTTG...AGGCTCCCCCTGGCAGAGCAGGCTGGCAGCTTCCATGTGACTATAGGGATGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| 3UTR-3UTR CCA 90 bp | CAGGGTCCAAGCCACTCTCCTCAGGCTTTGAGTGCTGAGTCCAGGTCTGGCAGCCCAAGATGGAGAAAATaGCAGGCTGCAGGGCGGTCA | + |
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Preference number: 2 (lower is better) Translates to: QGPSHSPQALSAESRSGSPRWRK*QAAGRS Trigger: TGACCGCCCTGCAGCCTGCCATTTTCTCCATCTTGG...GCTGCCAGACCTGGACTCAGCACTCAAAGCCTGAGGAGAGTGGCTTGGACCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231690.2 |
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| 3UTR-3UTR CCA 90 bp | CCAAGCCACTCTCCTCAGGCTTTGAGTGCTGAGTCCAGGTCTGGCAGCGAACAACTTGACGGAAAAGGATaGCCAGGGACCAGAGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: PSHSPQALSAESRSGSEQLDGKG*PGTRGP Trigger: TGGCCCTCTGGTCCCTGGCCATCCTTTTCCGTCAAG...TTGTTCGCTGCCAGACCTGGACTCAGCACTCAAAGCCTGAGGAGAGTGGCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231690.2 |
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| 3UTR CAA 90 bp | GGAGTACAGTATGTCTTCCAGGGTCCAAGCCACTCTCCTCAGGCTTaGAGTGCTGAGTCCAGGTCTGGCAGCGAACAAGCCTCATACCCA | + |
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Preference number: 2 (lower is better) Translates to: GVQYVFQGPSHSPQA*SAESRSGSEQASYP Trigger: TGGGTATGAGGCTTGTTCGCTGCCAGACCTGGACTCAGCACTCAAAGCCTGAGGAGAGTGGCTTGGACCCTGGAAGACATACTGTACTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231690.2 |
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| 3UTR-3UTR TCA 90 bp | TATGTCTTCCAGGGTCCAAGCCACTCTCCTCAGGCTTTGAGTGCTGAGTCCAGGAGAAGAGTAGGGAGGTaGGCAAGCGATCTGCCCACT | + |
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Preference number: 2 (lower is better) Translates to: YVFQGPSHSPQALSAESRRRVGR*ASDLPT Trigger: AGTGGGCAGATCGCTTGCTCACCTCCCTACTCTTCT...CCTGGACTCAGCACTCAAAGCCTGAGGAGAGTGGCTTGGACCCTGGAAGACATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231690.2 |
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| 3UTR-3UTR GCA 90 bp | TATGTCTTCCAGGGTCCAAGCCACTCTCCTCAGGCTTTGAGTGCTGAGTCCAGGGAGAAAATGGCAGGCTaGAGGGCGGTCAGGATGACA | + |
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Preference number: 2 (lower is better) Translates to: YVFQGPSHSPQALSAESREKMAG*RAVRMT Trigger: TGTCATCCTGACCGCCCTGCAGCCTGCCATTTTCTC...CCTGGACTCAGCACTCAAAGCCTGAGGAGAGTGGCTTGGACCCTGGAAGACATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231690.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGGGGAAGCTGGGCTGGTGCTGTTGTGCCCGGCTAAGGTCTACTCCCATTCTATCCCTATAGTCACATaGAAGCTGCCAGCCTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: LGEAGLVLLCPAKVYSHSIPIVT*KLPACS Trigger: AGAGCAGGCTGGCAGCTTCCATGTGACTATAGGGAT...AGAATGGGAGTAGACCTTAGCCGGGCACAACAGCACCAGCCCAGCTTCCCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| 3UTR CAA 90 bp | GCCAGGGACCAGAGGGCCAGAAGGGTAGACACAGCAAGGAGATTGTaGATCCAGAGAGCTGCGCTCTTCTCAGAAATTTCTCCTGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: ARDQRARRVDTARRL*IQRAALFSEISPGS Trigger: TGACCCAGGAGAAATTTCTGAGAAGAGCGCAGCTCTCTGGATCAACAATCTCCTTGCTGTGTCTACCCTTCTGGCCCTCTGGTCCCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231690.2 |
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| 3UTR-3UTR TCA 90 bp | TATGTCTTCCAGGGTCCAAGCCACTCTCCTCAGGCTTTGAGTGCTGAGTCCAGGAGATGCATCTTGGCTTaGCGGAAAAGGATGGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: YVFQGPSHSPQALSAESRRCILA*RKRMAR Trigger: CCTGGCCATCCTTTTCCGTCAAGCCAAGATGCATCT...CCTGGACTCAGCACTCAAAGCCTGAGGAGAGTGGCTTGGACCCTGGAAGACATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231690.2 |
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| 3UTR-3UTR GCA 90 bp | AAGAGAATTCCTGCTCTTCTGAGGAGTACAGTATGTCTTCCAGGGTCCAAGCCATGGAAGCTGCCAGCCTaGTCTGCCAGGGGGAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: KRIPALLRSTVCLPGSKPWKLPA*SARGSL Trigger: AAGGCTCCCCCTGGCAGAGCAGGCTGGCAGCTTCCA...TGGCTTGGACCCTGGAAGACATACTGTACTCCTCAGAAGAGCAGGAATTCTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042042.9 ENSMUST00000231690.2 |
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| 3UTR-3UTR CCA 90 bp | GCACAAAGGGACCTCAGACCTCCCAATAGTCAACTGATGCTCCTAAGGAGAGAAGTGCAGAGCCAAGCTTaGGGAAGCTGGGCTGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: AQRDLRPPNSQLMLLRREVQSQA*GSWAGA Trigger: AGCACCAGCCCAGCTTCCCCAAGCTTGGCTCTGCAC...TTCTCTCCTTAGGAGCATCAGTTGACTATTGGGAGGTCTGAGGTCCCTTTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| 3UTR CAA 90 bp | AGCAAACTTGGATCCCATGTTCTGTTCACCCAGATGCATCTTGGCTaGACGGAAAAGGATGGCCAGGGACCAGAGGGCCAGAAGGGTAGA | + |
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Preference number: 2 (lower is better) Translates to: SKLGSHVLFTQMHLG*TEKDGQGPEGQKGR Trigger: TCTACCCTTCTGGCCCTCTGGTCCCTGGCCATCCTTTTCCGTCAAGCCAAGATGCATCTGGGTGAACAGAACATGGGATCCAAGTTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231690.2 |
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| 3UTR-3UTR TCA 90 bp | TATGTCTTCCAGGGTCCAAGCCACTCTCCTCAGGCTTTGAGTGCTGAGTCCAGGGGAAGGTCTCCAGTATaGGCATGTGGCAGTTCATCA | + |
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Preference number: 2 (lower is better) Translates to: YVFQGPSHSPQALSAESRGRSPV*ACGSSS Trigger: TGATGAACTGCCACATGCTCATACTGGAGACCTTCC...CCTGGACTCAGCACTCAAAGCCTGAGGAGAGTGGCTTGGACCCTGGAAGACATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231690.2 |
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| 3UTR-3UTR CCA 90 bp | TATGTCTTCCAGGGTCCAAGCCACTCTCCTCAGGCTTTGAGTGCTGAGTCCAGGATCCCTATAGTCACATaGAAGCTGCCAGCCTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: YVFQGPSHSPQALSAESRIPIVT*KLPACS Trigger: AGAGCAGGCTGGCAGCTTCCATGTGACTATAGGGAT...CCTGGACTCAGCACTCAAAGCCTGAGGAGAGTGGCTTGGACCCTGGAAGACATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231690.2 |
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| 3UTR-3UTR TCA 90 bp | CCAAGCCACTCTCCTCAGGCTTTGAGTGCTGAGTCCAGGTCTGGCAGCGAACAATGGCAGTTCATCACTTaGGACCTGATTTTAGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: PSHSPQALSAESRSGSEQWQFIT*DLILEE Trigger: CTCTTCTAAAATCAGGTCTCAAGTGATGAACTGCCA...TTGTTCGCTGCCAGACCTGGACTCAGCACTCAAAGCCTGAGGAGAGTGGCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231690.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGCGGTCAGGATGACAAGCACCTGGAACAGAGCAAACTTGGATCCCATGTTCGAATTCCTGCTCTTCTaGGGAGTACAGTATGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: RAVRMTSTWNRANLDPMFEFLLF*GVQYVF Trigger: GAAGACATACTGTACTCCTCAGAAGAGCAGGAATTC...GAACATGGGATCCAAGTTTGCTCTGTTCCAGGTGCTTGTCATCCTGACCGCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231690.2 |
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| 3UTR-3UTR GCA 90 bp | CAACCTTGTCGTCTTTCCTTCGATAGTACATTCGTGTCAGCACTGTCATCAGGAGTTGATCCAGAGAGCTaGGCTCTTCTCAGAAATTTC | + |
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Preference number: 2 (lower is better) Translates to: QPCRLSFDSTFVSALSSGVDPES*ALLRNF Trigger: GAAATTTCTGAGAAGAGCGCAGCTCTCTGGATCAAC...TCCTGATGACAGTGCTGACACGAATGTACTATCGAAGGAAAGACGACAAGGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231690.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGCTCCTGAACAGAAAACACTGTTGGAAAGAGTCACCCATGACATTACCAGTGAATTCCTGCTCTTCTaGGGAGTACAGTATGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: KAPEQKTLLERVTHDITSEFLLF*GVQYVF Trigger: GAAGACATACTGTACTCCTCAGAAGAGCAGGAATTC...ACTGGTAATGTCATGGGTGACTCTTTCCAACAGTGTTTTCTGTTCAGGAGCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| 3UTR-3UTR GCA 90 bp | GCCCGGCTAAGGTCTACTCCCATTCTTATATCAGATAAACCATACATCAACCATAAGCAGTGTGTCTTGTaGAAGCGTCTCAGCTTTCAC | + |
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Preference number: 2 (lower is better) Translates to: ARLRSTPILISDKPYINHKQCVL*KRLSFH Trigger: GTGAAAGCTGAGACGCTTGCACAAGACACACTGCTT...ATGGTTGATGTATGGTTTATCTGATATAAGAATGGGAGTAGACCTTAGCCGGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| 3UTR-3UTR CCA 90 bp | ATACCCAACCTTGTCGTCTTTCCTTCGATAGTACATTCGTGTCAGCACTGTCATAGGATGACAAGCACCTaGAACAGAGCAAACTTGGAT | + |
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Preference number: 2 (lower is better) Translates to: IPNLVVFPSIVHSCQHCHRMTST*NRANLD Trigger: ATCCAAGTTTGCTCTGTTCCAGGTGCTTGTCATCCT...ATGACAGTGCTGACACGAATGTACTATCGAAGGAAAGACGACAAGGTTGGGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231690.2 |
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| 3UTR CAA 90 bp | GGAGTTTGCCTCCGAGTTCAGTGTCTCACGTTACTGTCTAATACTTaGTGCAGAATTGTATTGGCTTTTGTCATTCAGCCAAATAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: GVCLRVQCLTLLSNT*CRIVLAFVIQPNKG Trigger: GCCTTTATTTGGCTGAATGACAAAAGCCAATACAATTCTGCACAAAGTATTAGACAGTAACGTGAGACACTGAACTCGGAGGCAAACTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| 3UTR CAA 90 bp | GTCTCACGTTACTGTCTAATACTTTGTGCAGAATTGTATTGGCTTTaGTCATTCAGCCAAATAAAGGCCATGTGTTTTTGCCTGGTGTTT | + |
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Preference number: 2 (lower is better) Translates to: VSRYCLILCAELYWL*SFSQIKAMCFCLVF Trigger: AAACACCAGGCAAAAACACATGGCCTTTATTTGGCTGAATGACAAAAGCCAATACAATTCTGCACAAAGTATTAGACAGTAACGTGAGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| 3UTR CAA 90 bp | GTTCAGTGTCTCACGTTACTGTCTAATACTTTGTGCAGAATTGTATaGGCTTTTGTCATTCAGCCAAATAAAGGCCATGTGTTTTTGCCT | + |
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Preference number: 2 (lower is better) Translates to: VQCLTLLSNTLCRIV*AFVIQPNKGHVFLP Trigger: AGGCAAAAACACATGGCCTTTATTTGGCTGAATGACAAAAGCCAATACAATTCTGCACAAAGTATTAGACAGTAACGTGAGACACTGAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| 3UTR TCA 72 bp | CCAGGGTCCAAGCCACTCTCCTCAGGCTTTGAGTGCTaGGTCCAGGTCTGGCAGCGAACAAGCCTCATACCC | + |
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Preference number: 3 (lower is better) Translates to: PGSKPLSSGFEC*VQVWQRTSLIP Trigger: GGGTATGAGGCTTGTTCGCTGCCAGACCTGGACTCAGCACTCAAAGCCTGAGGAGAGTGGCTTGGACCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231690.2 |
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| 3UTR GCA 72 bp | TCCAGTGCAGAGCCAAGCTTGGGGAAGCTGGGCTGGTaGTGTTGTGCCCGGCTAAGGTCTACTCCCATTCTT | + |
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Preference number: 3 (lower is better) Translates to: SSAEPSLGKLGW*CCARLRSTPIL Trigger: AAGAATGGGAGTAGACCTTAGCCGGGCACAACAGCACCAGCCCAGCTTCCCCAAGCTTGGCTCTGCACTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| 3UTR CCA 72 bp | GATTCCAGTGCAGAGCCAAGCTTGGGGAAGCTGGGCTaGTGCTGTTGTGCCCGGCTAAGGTCTACTCCCATT | + |
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Preference number: 3 (lower is better) Translates to: DSSAEPSLGKLG*CCCARLRSTPI Trigger: AATGGGAGTAGACCTTAGCCGGGCACAACAGCACCAGCCCAGCTTCCCCAAGCTTGGCTCTGCACTGGAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| 3UTR TCA 72 bp | AGATGGAGAAAATGGCAGGCTGCAGGGCGGTCAGGATaGCAAGCACCTGGAACAGAGCAAACTTGGATCCCA | + |
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Preference number: 3 (lower is better) Translates to: RWRKWQAAGRSG*QAPGTEQTWIP Trigger: TGGGATCCAAGTTTGCTCTGTTCCAGGTGCTTGTCATCCTGACCGCCCTGCAGCCTGCCATTTTCTCCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231690.2 |
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| 3UTR GCA 72 bp | AGAGCCAAGCTTGGGGAAGCTGGGCTGGTGCTGTTGTaGCCGGCTAAGGTCTACTCCCATTCTTATATCAGA | + |
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Preference number: 3 (lower is better) Translates to: RAKLGEAGLVLL*PAKVYSHSYIR Trigger: TCTGATATAAGAATGGGAGTAGACCTTAGCCGGGCACAACAGCACCAGCCCAGCTTCCCCAAGCTTGGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| 3UTR TCA 72 bp | CATCACTTGAGACCTGATTTTAGAAGAGTAGGGAGGTaGGCAAGCGATCTGCCCACTGTTAGCCAAGATGGA | + |
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Preference number: 3 (lower is better) Translates to: HHLRPDFRRVGR*ASDLPTVSQDG Trigger: TCCATCTTGGCTAACAGTGGGCAGATCGCTTGCTCACCTCCCTACTCTTCTAAAATCAGGTCTCAAGTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231690.2 |
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| 3UTR-3UTR CAA 90 bp | CGTTACTGTCTAATACTTTGTGCAGAATTGTATTGGCTTTTGTCATTCAGCCAAAGTGCAGAGCCAAGCTaGGGGAAGCTGGGCTGGTGC | + |
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Preference number: 3 (lower is better) Translates to: RYCLILCAELYWLLSFSQSAEPS*GKLGWC Trigger: GCACCAGCCCAGCTTCCCCAAGCTTGGCTCTGCACT...TTGGCTGAATGACAAAAGCCAATACAATTCTGCACAAAGTATTAGACAGTAACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| 3UTR TCA 72 bp | CTTCTCCTCTTCATTCTCCTGTGCAGAAGCTCAAGGTaGCTTTTGACGTATTCAGGGTTAATAGTGGCGCCA | + |
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Preference number: 3 (lower is better) Translates to: LLLFILLCRSSR*LLTYSGLIVAP Trigger: TGGCGCCACTATTAACCCTGAATACGTCAAAAGTCACCTTGAGCTTCTGCACAGGAGAATGAAGAGGAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| 3UTR GCA 72 bp | GGTAGACACAGCAAGGAGATTGTTGATCCAGAGAGCTaGGCTCTTCTCAGAAATTTCTCCTGGGTCATAGAT | + |
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Preference number: 3 (lower is better) Translates to: GRHSKEIVDPES*ALLRNFSWVID Trigger: ATCTATGACCCAGGAGAAATTTCTGAGAAGAGCGCAGCTCTCTGGATCAACAATCTCCTTGCTGTGTCTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231690.2 |
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| 3UTR TCA 72 bp | TTAGATGACCCAGGTTGGGTTTCACTAGGTTTGAAGTaGGCTCCTTCCACCCTATTGGAGAAAGTGACTGTT | + |
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Preference number: 3 (lower is better) Translates to: LDDPGWVSLGLK*APSTLLEKVTV Trigger: AACAGTCACTTTCTCCAATAGGGTGGAAGGAGCTCACTTCAAACCTAGTGAAACCCAACCTGGGTCATCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| 3UTR-3UTR CAA 90 bp | ATACCCAACCTTGTCGTCTTTCCTTCGATAGTACATTCGTGTCAGCACTGTCATGTGGCAGTTCATCACTaGAGACCTGATTTTAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: IPNLVVFPSIVHSCQHCHVAVHH*RPDFRR Trigger: TCTTCTAAAATCAGGTCTCAAGTGATGAACTGCCAC...ATGACAGTGCTGACACGAATGTACTATCGAAGGAAAGACGACAAGGTTGGGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231690.2 |
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| 3UTR TCA 72 bp | GAAAGTGACTGTTCTGAACAGTTAGAGTTGGTTGGCTaGGTGTTTTGCATCAAGGCTCCTGAACAGAAAACA | + |
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Preference number: 3 (lower is better) Translates to: ESDCSEQLELVG*VFCIKAPEQKT Trigger: TGTTTTCTGTTCAGGAGCCTTGATGCAAAACACTCAGCCAACCAACTCTAACTGTTCAGAACAGTCACTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| 3UTR TCA 72 bp | TGCAAGCGTCTCAGCTTTCACCATTTATTACAAAAATaGGAAAGACTCAAAACAGGTTCAACCCACTGCACT | + |
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Preference number: 3 (lower is better) Translates to: CKRLSFHHLLQK*ERLKTGSTHCT Trigger: AGTGCAGTGGGTTGAACCTGTTTTGAGTCTTTCTCATTTTTGTAATAAATGGTGAAAGCTGAGACGCTTGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042042.9 ENSMUST00000231690.2 |
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| 3UTR CCA 72 bp | TCACGTTACTGTCTAATACTTTGTGCAGAATTGTATTaGCTTTTGTCATTCAGCCAAATAAAGGCCATGTGT | + |
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Preference number: 3 (lower is better) Translates to: SRYCLILCAELY*LLSFSQIKAMC Trigger: ACACATGGCCTTTATTTGGCTGAATGACAAAAGCCAATACAATTCTGCACAAAGTATTAGACAGTAACGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| CDS-3UTR CCA 90 bp | CAGGGTCCAAGCCACTCTCCTCAGGCTTTGAGTGCTGAGTCCAGGTCTGGCAGCGAGGGCTATGTCCACTaGGCCCAGTGCTCTCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QGPSHSPQALSAESRSGSEGYVH*AQCSQE Trigger: CTCCTGAGAGCACTGGGCCCAGTGGACATAGCCCTC...GCTGCCAGACCTGGACTCAGCACTCAAAGCCTGAGGAGAGTGGCTTGGACCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231690.2 |
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| CDS-3UTR GCA 90 bp | TATGTCTTCCAGGGTCCAAGCCACTCTCCTCAGGCTTTGAGTGCTGAGTCCAGGCAACAGGGACCCGTGTaGACCCTCATCGGGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: YVFQGPSHSPQALSAESRQQGPV*TLIGVS Trigger: GGACACCCCGATGAGGGTGCACACGGGTCCCTGTTG...CCTGGACTCAGCACTCAAAGCCTGAGGAGAGTGGCTTGGACCCTGGAAGACATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231690.2 |
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| CDS-3UTR GCA 90 bp | CTTCATCCCTATAGTCACATGGAAGCTGCCAGCCTGCTCTGCCAGGGGGAGCCTCCCAGCAGGAGCAGCTaGAGCTTCTTTCTGGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LHPYSHMEAASLLCQGEPPSRSS*SFFLVS Trigger: ACTTACCAGAAAGAAGCTGCAGCTGCTCCTGCTGGG...AGGCTCCCCCTGGCAGAGCAGGCTGGCAGCTTCCATGTGACTATAGGGATGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042042.9 ENSMUST00000231690.2 |
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| CDS-3UTR CCA 90 bp | TCACATGGAAGCTGCCAGCCTGCTCTGCCAGGGGGAGCCTTAACCACTGATAAGGGTAAGTATGAGAGGTaGGCAGCAGGGACAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SHGSCQPALPGGALTTDKGKYER*AAGTAA Trigger: TGCTGCTGTCCCTGCTGCCCACCTCTCATACTTACC...CTTATCAGTGGTTAAGGCTCCCCCTGGCAGAGCAGGCTGGCAGCTTCCATGTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042042.9 ENSMUST00000231690.2 |
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| CDS-3UTR TCA 90 bp | CAGGGTCCAAGCCACTCTCCTCAGGCTTTGAGTGCTGAGTCCAGGTCTGGCAGCCAAAGCCTTCCACCATaGCCATCATCAGCAGGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: QGPSHSPQALSAESRSGSQSLPP*PSSAGK Trigger: TTTACCTGCTGATGATGGTCATGGTGGAAGGCTTTG...GCTGCCAGACCTGGACTCAGCACTCAAAGCCTGAGGAGAGTGGCTTGGACCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231690.2 |
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| CDS-3UTR TCA 90 bp | TCACATGGAAGCTGCCAGCCTGCTCTGCCAGGGGGAGCCTTAACCACTGATAAGAGATGCATCTTGGCTTaGCGGAAAAGGATGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SHGSCQPALPGGALTTDKRCILA*RKRMAR Trigger: CCTGGCCATCCTTTTCCGTCAAGCCAAGATGCATCT...CTTATCAGTGGTTAAGGCTCCCCCTGGCAGAGCAGGCTGGCAGCTTCCATGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| CDS-3UTR GCA 90 bp | CACCCAGATGCATCTTGGCTTGACGGAAAAGGATGGCCAGGGACCAGAGGGCCAAGCAGGCAGGGGAGATaGTGTAATTGGTCTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HPDASWLDGKGWPGTRGPSRQGR*CNWSPE Trigger: TTCTGGAGACCAATTACAGCATCTCCCCTGCCTGCT...TGGCCCTCTGGTCCCTGGCCATCCTTTTCCGTCAAGCCAAGATGCATCTGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231690.2 |
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| CDS-3UTR GCA 90 bp | CTCCTAAGGAGAGAAGGATTCCAGTGCAGAGCCAAGCTTGGGGAAGCTGGGCTGAGATACCACCGTGGGTaGAGAGCTACTCCAGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLRREGFQCRAKLGEAGLRYHRG*RATPDQ Trigger: CTGATCTGGAGTAGCTCTGCACCCACGGTGGTATCT...CAGCCCAGCTTCCCCAAGCTTGGCTCTGCACTGGAATCCTTCTCTCCTTAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| CDS-3UTR GCA 90 bp | GCACAAAGGGACCTCAGACCTCCCAATAGTCAACTGATGCTCCTAAGGAGAGAACAACAGGGACCCGTGTaGACCCTCATCGGGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: AQRDLRPPNSQLMLLRREQQGPV*TLIGVS Trigger: GGACACCCCGATGAGGGTGCACACGGGTCCCTGTTG...TTCTCTCCTTAGGAGCATCAGTTGACTATTGGGAGGTCTGAGGTCCCTTTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| CDS-3UTR CCA 90 bp | TATGTCTTCCAGGGTCCAAGCCACTCTCCTCAGGCTTTGAGTGCTGAGTCCAGGGGTAAGTATGAGAGGTaGGCAGCAGGGACAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YVFQGPSHSPQALSAESRGKYER*AAGTAA Trigger: TGCTGCTGTCCCTGCTGCCCACCTCTCATACTTACC...CCTGGACTCAGCACTCAAAGCCTGAGGAGAGTGGCTTGGACCCTGGAAGACATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231690.2 |
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| 3UTR CAA 72 bp | TGCAGAGCCAAGCTTGGGGAAGCTGGGCTGGTGCTGTaGTGCCCGGCTAAGGTCTACTCCCATTCTTATATC | + |
|
Preference number: 4 (lower is better) Translates to: CRAKLGEAGLVL*CPAKVYSHSYI Trigger: GATATAAGAATGGGAGTAGACCTTAGCCGGGCACAACAGCACCAGCCCAGCTTCCCCAAGCTTGGCTCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| CDS-3UTR TCA 90 bp | CTCCTAAGGAGAGAAGGATTCCAGTGCAGAGCCAAGCTTGGGGAAGCTGGGCTGGGAAGGTCTCCAGTATaGGCATGTGGCAGTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LLRREGFQCRAKLGEAGLGRSPV*ACGSSS Trigger: TGATGAACTGCCACATGCTCATACTGGAGACCTTCC...CAGCCCAGCTTCCCCAAGCTTGGCTCTGCACTGGAATCCTTCTCTCCTTAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| CDS-3UTR GCA 90 bp | GGGACAGAAGAGAATTCCTGCTCTTCTGAGGAGTACAGTATGTCTTCCAGGGTCTCTCAGGAGCTGGGCTaGGGTGGGAGGGTGAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GTEENSCSSEEYSMSSRVSQELG*GGRVRE Trigger: TTCTCTCACCCTCCCACCGCAGCCCAGCTCCTGAGA...GACCCTGGAAGACATACTGTACTCCTCAGAAGAGCAGGAATTCTCTTCTGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042042.9 ENSMUST00000231690.2 |
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| CDS-3UTR GCA 90 bp | TATGTCTTCCAGGGTCCAAGCCACTCTCCTCAGGCTTTGAGTGCTGAGTCCAGGCAGTGTCCTCAGTACTaGTTTCTTCCCACCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: YVFQGPSHSPQALSAESRQCPQY*FLPTKA Trigger: GGCTTTGGTGGGAAGAAAGCAGTACTGAGGACACTG...CCTGGACTCAGCACTCAAAGCCTGAGGAGAGTGGCTTGGACCCTGGAAGACATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231690.2 |
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| CDS-3UTR TCA 90 bp | TCACATGGAAGCTGCCAGCCTGCTCTGCCAGGGGGAGCCTTAACCACTGATAAGCAGAAAAATGGCAACTaGGCCAGTGGTAAGAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SHGSCQPALPGGALTTDKQKNGN*ASGKKG Trigger: ACCTTTCTTACCACTGGCTCAGTTGCCATTTTTCTG...CTTATCAGTGGTTAAGGCTCCCCCTGGCAGAGCAGGCTGGCAGCTTCCATGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000042042.9 ENSMUST00000231690.2 |
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| CDS-3UTR TCA 90 bp | GAAGCTGGGCTGGTGCTGTTGTGCCCGGCTAAGGTCTACTCCCATTCTTATATCTCAGAGTCCTCTTCTTaGTGGGGCAAAGGGTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EAGLVLLCPAKVYSHSYISESSS*WGKGCS Trigger: AGAACACCCTTTGCCCCATCAAGAAGAGGACTCTGA...GATATAAGAATGGGAGTAGACCTTAGCCGGGCACAACAGCACCAGCCCAGCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| CDS-3UTR GCA 90 bp | CGTGTCAGCACTGTCATCAGGAAGGTCTCCAGTATGAGCATGTGGCAGTTCATCCCCAGCAGGAGCAGCTaGAGCTTCTTTCTGGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RVSTVIRKVSSMSMWQFIPSRSS*SFFLVS Trigger: ACTTACCAGAAAGAAGCTGCAGCTGCTCCTGCTGGG...GATGAACTGCCACATGCTCATACTGGAGACCTTCCTGATGACAGTGCTGACACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231690.2 |
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| CDS-3UTR TCA 90 bp | AATTCCTGCTCTTCTGAGGAGTACAGTATGTCTTCCAGGGTCCAAGCCACTCTCACCTGGGGTCAAGTTTaGTATGAGTCCTGCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NSCSSEEYSMSSRVQATLTWGQV*YESCLA Trigger: AGCCAGGCAGGACTCATATCAAACTTGACCCCAGGT...GAGAGTGGCTTGGACCCTGGAAGACATACTGTACTCCTCAGAAGAGCAGGAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042042.9 ENSMUST00000231690.2 |
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| CDS-3UTR TCA 90 bp | GCGCCAACAGAAGCAGTGTGTCTTGTGCAAGCGTCTCAGCTTTCACCATTTATTAGAAGAGTAGGGAGGTaGGCAAGCGATCTGCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: APTEAVCLVQASQLSPFIRRVGR*ASDLPT Trigger: AGTGGGCAGATCGCTTGCTCACCTCCCTACTCTTCT...AATAAATGGTGAAAGCTGAGACGCTTGCACAAGACACACTGCTTCTGTTGGCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| CDS-3UTR CCA 90 bp | TCCTTCCACCCTATTGGAGAAAGTGACTGTTCTGAACAGTTAGAGTTGGTTGGCCTTGACGGAAAAGGATaGCCAGGGACCAGAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFHPIGESDCSEQLELVGLDGKG*PGTRGP Trigger: TGGCCCTCTGGTCCCTGGCCATCCTTTTCCGTCAAG...GCCAACCAACTCTAACTGTTCAGAACAGTCACTTTCTCCAATAGGGTGGAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| CDS-3UTR TCA 90 bp | GGCTGGTGCTGTTGTGCCCGGCTAAGGTCTACTCCCATTCTTATATCAGATAAAACCTGGGGTCAAGTTTaGTATGAGTCCTGCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GWCCCARLRSTPILISDKTWGQV*YESCLA Trigger: AGCCAGGCAGGACTCATATCAAACTTGACCCCAGGT...TTTATCTGATATAAGAATGGGAGTAGACCTTAGCCGGGCACAACAGCACCAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| CDS-3UTR TCA 90 bp | CGTGTCAGCACTGTCATCAGGAAGGTCTCCAGTATGAGCATGTGGCAGTTCATCTGCTCAGCGTTATCTTaGAGAAGGCGTACTGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RVSTVIRKVSSMSMWQFICSALS*RRRTGK Trigger: CTTTCCAGTACGCCTTCTTCAAGATAACGCTGAGCA...GATGAACTGCCACATGCTCATACTGGAGACCTTCCTGATGACAGTGCTGACACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231690.2 |
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| CDS-3UTR GCA 90 bp | GCCCGGCTAAGGTCTACTCCCATTCTTATATCAGATAAACCATACATCAACCATTCTCAGGAGCTGGGCTaGGGTGGGAGGGTGAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ARLRSTPILISDKPYINHSQELG*GGRVRE Trigger: TTCTCTCACCCTCCCACCGCAGCCCAGCTCCTGAGA...ATGGTTGATGTATGGTTTATCTGATATAAGAATGGGAGTAGACCTTAGCCGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| CDS-3UTR CCA 90 bp | GAAGCTGGGCTGGTGCTGTTGTGCCCGGCTAAGGTCTACTCCCATTCTTATATCAGGATGACAAGCACCTaGAACAGAGCAAACTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: EAGLVLLCPAKVYSHSYIRMTST*NRANLD Trigger: ATCCAAGTTTGCTCTGTTCCAGGTGCTTGTCATCCT...GATATAAGAATGGGAGTAGACCTTAGCCGGGCACAACAGCACCAGCCCAGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| CDS-3UTR GCA 90 bp | GCGCCAACAGAAGCAGTGTGTCTTGTGCAAGCGTCTCAGCTTTCACCATTTATTAGCAGGCAGGGGAGATaGTGTAATTGGTCTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: APTEAVCLVQASQLSPFISRQGR*CNWSPE Trigger: TTCTGGAGACCAATTACAGCATCTCCCCTGCCTGCT...AATAAATGGTGAAAGCTGAGACGCTTGCACAAGACACACTGCTTCTGTTGGCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| CDS-3UTR GCA 90 bp | AAGGCTCCTGAACAGAAAACACTGTTGGAAAGAGTCACCCATGACATTACCAGTGAGAAAATGGCAGGCTaGAGGGCGGTCAGGATGACA | + |
|
Preference number: 4 (lower is better) Translates to: KAPEQKTLLERVTHDITSEKMAG*RAVRMT Trigger: TGTCATCCTGACCGCCCTGCAGCCTGCCATTTTCTC...ACTGGTAATGTCATGGGTGACTCTTTCCAACAGTGTTTTCTGTTCAGGAGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| CDS-3UTR CCA 90 bp | TCCTTCCACCCTATTGGAGAAAGTGACTGTTCTGAACAGTTAGAGTTGGTTGGCACACAGATACCACCGTaGGTGCAGAGCTACTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SFHPIGESDCSEQLELVGTQIPP*VQSYSR Trigger: TCTGGAGTAGCTCTGCACCCACGGTGGTATCTGTGT...GCCAACCAACTCTAACTGTTCAGAACAGTCACTTTCTCCAATAGGGTGGAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| CDS-3UTR TCA 90 bp | GTTGATCCAGAGAGCTGCGCTCTTCTCAGAAATTTCTCCTGGGTCATAGATGCCCAGAAAAATGGCAACTaGGCCAGTGGTAAGAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VDPESCALLRNFSWVIDAQKNGN*ASGKKG Trigger: ACCTTTCTTACCACTGGCTCAGTTGCCATTTTTCTG...GGCATCTATGACCCAGGAGAAATTTCTGAGAAGAGCGCAGCTCTCTGGATCAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231690.2 |
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| CDS-3UTR GCA 90 bp | GCACAAAGGGACCTCAGACCTCCCAATAGTCAACTGATGCTCCTAAGGAGAGAAGTTGATCCAGAGAGCTaGGCTCTTCTCAGAAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: AQRDLRPPNSQLMLLRREVDPES*ALLRNF Trigger: GAAATTTCTGAGAAGAGCGCAGCTCTCTGGATCAAC...TTCTCTCCTTAGGAGCATCAGTTGACTATTGGGAGGTCTGAGGTCCCTTTGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| CDS-3UTR CCA 90 bp | CATCGCTACCATATTAACGAGCGTTCTGTTCCCAAAAGAAACTTTTCAGTTCTTGAGGGCTATGTCCACTaGGCCCAGTGCTCTCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HRYHINERSVPKRNFSVLEGYVH*AQCSQE Trigger: CTCCTGAGAGCACTGGGCCCAGTGGACATAGCCCTC...AAGAACTGAAAAGTTTCTTTTGGGAACAGAACGCTCGTTAATATGGTAGCGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| CDS-3UTR TCA 90 bp | TCCTTCCACCCTATTGGAGAAAGTGACTGTTCTGAACAGTTAGAGTTGGTTGGCCAAAGCCTTCCACCATaGCCATCATCAGCAGGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SFHPIGESDCSEQLELVGQSLPP*PSSAGK Trigger: TTTACCTGCTGATGATGGTCATGGTGGAAGGCTTTG...GCCAACCAACTCTAACTGTTCAGAACAGTCACTTTCTCCAATAGGGTGGAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| CDS-3UTR TCA 90 bp | GCCCGGCTAAGGTCTACTCCCATTCTTATATCAGATAAACCATACATCAACCATCAGCAAGGAGATTGTTaGTCCAGAGAGCTGCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ARLRSTPILISDKPYINHQQGDC*SRELRS Trigger: AGAGCGCAGCTCTCTGGATCAACAATCTCCTTGCTG...ATGGTTGATGTATGGTTTATCTGATATAAGAATGGGAGTAGACCTTAGCCGGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| CDS-3UTR GCA 90 bp | AAAACACTGTTGGAAAGAGTCACCCATGACATTACCAGTGCAATGGGGAGTTTGCAGTGTCCTCAGTACTaGTTTCTTCCCACCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KTLLERVTHDITSAMGSLQCPQY*FLPTKA Trigger: GGCTTTGGTGGGAAGAAAGCAGTACTGAGGACACTG...CAAACTCCCCATTGCACTGGTAATGTCATGGGTGACTCTTTCCAACAGTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| CDS-3UTR TCA 90 bp | GGCTGGTGCTGTTGTGCCCGGCTAAGGTCTACTCCCATTCTTATATCAGATAAATGGCAGTTCATCACTTaGGACCTGATTTTAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GWCCCARLRSTPILISDKWQFIT*DLILEE Trigger: CTCTTCTAAAATCAGGTCTCAAGTGATGAACTGCCA...TTTATCTGATATAAGAATGGGAGTAGACCTTAGCCGGGCACAACAGCACCAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| CDS-3UTR CCA 90 bp | CATCGCTACCATATTAACGAGCGTTCTGTTCCCAAAAGAAACTTTTCAGTTCTTCCAAGATGGAGAAAATaGCAGGCTGCAGGGCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HRYHINERSVPKRNFSVLPRWRK*QAAGRS Trigger: TGACCGCCCTGCAGCCTGCCATTTTCTCCATCTTGG...AAGAACTGAAAAGTTTCTTTTGGGAACAGAACGCTCGTTAATATGGTAGCGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| CDS-3UTR TCA 90 bp | CGTTACTGTCTAATACTTTGTGCAGAATTGTATTGGCTTTTGTCATTCAGCCAATGCTCAGCGTTATCTTaGAGAAGGCGTACTGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RYCLILCAELYWLLSFSQCSALS*RRRTGK Trigger: CTTTCCAGTACGCCTTCTTCAAGATAACGCTGAGCA...TTGGCTGAATGACAAAAGCCAATACAATTCTGCACAAAGTATTAGACAGTAACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| 3UTR CAA 72 bp | CTCACGTTACTGTCTAATACTTTGTGCAGAATTGTATaGGCTTTTGTCATTCAGCCAAATAAAGGCCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: LTLLSNTLCRIV*AFVIQPNKGHV Trigger: CACATGGCCTTTATTTGGCTGAATGACAAAAGCCAATACAATTCTGCACAAAGTATTAGACAGTAACGTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| CDS GCA 90 bp | ACCCGTGTGCACCCTCATCGGGGTGTCCTTCAGTGTCCTCAGTACTaGTTTCTTCCCACCAAAGCCTTCCACCATGACCATCATCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TRVHPHRGVLQCPQY*FLPTKAFHHDHHQQ Trigger: CTGCTGATGATGGTCATGGTGGAAGGCTTTGGTGGGAAGAAAGCAGTACTGAGGACACTGAAGGACACCCCGATGAGGGTGCACACGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042042.9 ENSMUST00000231690.2 |
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| CDS-3UTR CAA 90 bp | CCTATAGTCACATGGAAGCTGCCAGCCTGCTCTGCCAGGGGGAGCCTTAACCACATCAGAGTCCTCTTCTaGATGGGGCAAAGGGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PIVTWKLPACSARGSLNHIRVLF*MGQRVF Trigger: GAACACCCTTTGCCCCATCAAGAAGAGGACTCTGAT...GTGGTTAAGGCTCCCCCTGGCAGAGCAGGCTGGCAGCTTCCATGTGACTATAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042042.9 ENSMUST00000231690.2 |
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| CDS GCA 90 bp | GTTATCTTGAAGAAGGCGTACTGGAAAGGGCCCAGCAGGAGCAGCTaGAGCTTCTTTCTGGTAAGTATGAGAGGTGGGCAGCAGGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: VILKKAYWKGPSRSS*SFFLVSMRGGQQGQ Trigger: CTGTCCCTGCTGCCCACCTCTCATACTTACCAGAAAGAAGCTGCAGCTGCTCCTGCTGGGCCCTTTCCAGTACGCCTTCTTCAAGATAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042042.9 ENSMUST00000231690.2 |
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| CDS GCA 90 bp | GGCCAGAAGGGTAGACACAGCAAGGAGATTGTTGATCCAGAGAGCTaGGCTCTTCTCAGAAATTTCTCCTGGGTCATAGATGCCGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GQKGRHSKEIVDPES*ALLRNFSWVIDAVR Trigger: CCTGACGGCATCTATGACCCAGGAGAAATTTCTGAGAAGAGCGCAGCTCTCTGGATCAACAATCTCCTTGCTGTGTCTACCCTTCTGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| CDS TCA 90 bp | ATACCACCGTGGGTGCAGAGCTACTCCAGATCAGAGTCCTCTTCTTaGTGGGGCAAAGGGTGTTCTTGTATAGGTAAACAGCATCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: IPPWVQSYSRSESSS*WGKGCSCIGKQHPP Trigger: TGGAGGATGCTGTTTACCTATACAAGAACACCCTTTGCCCCATCAAGAAGAGGACTCTGATCTGGAGTAGCTCTGCACCCACGGTGGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| CDS-3UTR CAA 90 bp | AATTCCTGCTCTTCTGAGGAGTACAGTATGTCTTCCAGGGTCCAAGCCACTCTCATCAGAGTCCTCTTCTaGATGGGGCAAAGGGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: NSCSSEEYSMSSRVQATLIRVLF*MGQRVF Trigger: GAACACCCTTTGCCCCATCAAGAAGAGGACTCTGAT...GAGAGTGGCTTGGACCCTGGAAGACATACTGTACTCCTCAGAAGAGCAGGAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042042.9 ENSMUST00000231690.2 |
||
| CDS TCA 90 bp | ATAAAACCGTGGGTGCAGAGCTACTCCAGATCAGAGTCCTCTTCTTaGTGGGGCAAAGGGTGTTCTTGTATAGGTAAACAGCATCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: IKPWVQSYSRSESSS*WGKGCSCIGKQHPP Trigger: TGGAGGATGCTGTTTACCTATACAAGAACACCCTTTGCCCCATCAAGAAGAGGACTCTGATCTGGAGTAGCTCTGCACCCACGGTTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231690.2 |
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| CDS-3UTR CAA 90 bp | AAGAGAATTCCTGCTCTTCTGAGGAGTACAGTATGTCTTCCAGGGTCCAAGCCAATGCTCAGCGTTATCTaGAAGAAGGCGTACTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: KRIPALLRSTVCLPGSKPMLSVI*KKAYWK Trigger: TTTCCAGTACGCCTTCTTCAAGATAACGCTGAGCAT...TGGCTTGGACCCTGGAAGACATACTGTACTCCTCAGAAGAGCAGGAATTCTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042042.9 ENSMUST00000231690.2 |
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| CDS-3UTR CAA 90 bp | AGCAAGGAGATTGTTGATCCAGAGAGCTGCGCTCTTCTCAGAAATTTCTCCTGGATGCTCAGCGTTATCTaGAAGAAGGCGTACTGGAAA | + |
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Preference number: 5 (lower is better) Translates to: SKEIVDPESCALLRNFSWMLSVI*KKAYWK Trigger: TTTCCAGTACGCCTTCTTCAAGATAACGCTGAGCAT...CCAGGAGAAATTTCTGAGAAGAGCGCAGCTCTCTGGATCAACAATCTCCTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231690.2 |
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| CDS-3UTR CAA 90 bp | CGTTACTGTCTAATACTTTGTGCAGAATTGTATTGGCTTTTGTCATTCAGCCAAGTGGCAGTTCATCACTaGAGACCTGATTTTAGAAGA | + |
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Preference number: 5 (lower is better) Translates to: RYCLILCAELYWLLSFSQVAVHH*RPDFRR Trigger: TCTTCTAAAATCAGGTCTCAAGTGATGAACTGCCAC...TTGGCTGAATGACAAAAGCCAATACAATTCTGCACAAAGTATTAGACAGTAACG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| CDS GCA 72 bp | CAAGATGATGGTGAGGGCTATGTCCACTGGGCCCAGTaGTCTCAGGAGCTGGGCTGCGGTGGGAGGGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: QDDGEGYVHWAQ*SQELGCGGRVR Trigger: TCTCACCCTCCCACCGCAGCCCAGCTCCTGAGAGCACTGGGCCCAGTGGACATAGCCCTCACCATCATCTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042042.9 ENSMUST00000231690.2 |
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| CDS CAA 72 bp | GGGATGAGGAACAGGCCCACTATGCTCAGCGTTATCTaGAAGAAGGCGTACTGGAAAGGGCCCAGCAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: GMRNRPTMLSVI*KKAYWKGPSRS Trigger: GCTCCTGCTGGGCCCTTTCCAGTACGCCTTCTTCAAGATAACGCTGAGCATAGTGGGCCTGTTCCTCATCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042042.9 ENSMUST00000231690.2 |
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| CDS GCA 72 bp | AAGAAGGCGTACTGGAAAGGGCCCAGCAGGAGCAGCTaGAGCTTCTTTCTGGTAAGTATGAGAGGTGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: KKAYWKGPSRSS*SFFLVSMRGGQ Trigger: CTGCCCACCTCTCATACTTACCAGAAAGAAGCTGCAGCTGCTCCTGCTGGGCCCTTTCCAGTACGCCTTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042042.9 ENSMUST00000231690.2 |
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| CDS CCA 72 bp | GATCCAGAGAGCTGCGCTCTTCTCAGAAATTTCTCCTaGGTCATAGATGCCGTCAGGGATGAGGAACAGGCC | + |
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Preference number: 6 (lower is better) Translates to: DPESCALLRNFS*VIDAVRDEEQA Trigger: GGCCTGTTCCTCATCCCTGACGGCATCTATGACCCAGGAGAAATTTCTGAGAAGAGCGCAGCTCTCTGGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| CDS TCA 72 bp | CGGCATAAAACGAGGTTATGGCCATTTCTACAAGTGTaGGGGCGCGAGGAATCCAGAGACCAAAGCAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: RHKTRLWPFLQV*GREESRDQSSR Trigger: TCTGCTGCTTTGGTCTCTGGATTCCTCGCGCCCTCACACTTGTAGAAATGGCCATAACCTCGTTTTATGCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042042.9 |
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| CDS CCA 72 bp | CATCATCAGCAGGTAAAAGCATACGGCATAAAACCGTaGGTGCAGAGCTACTCCAGATCAGAGTCCTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: HHQQVKAYGIKP*VQSYSRSESSS Trigger: AGAAGAGGACTCTGATCTGGAGTAGCTCTGCACCCACGGTTTTATGCCGTATGCTTTTACCTGCTGATGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231690.2 |
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