RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC4A9 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024485

Ensembl transcript IDs: ENSMUST00000074298.13, ENSMUST00000115694.3, ENSMUST00000235181.2, ENSMUST00000236124.2, ENSMUST00000236126.2, ENSMUST00000236779.2, ENSMUST00000237174.2, ENSMUST00000237595.2

Found 451 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGAGGCATGTGCACATCAGTGGGCGCACTTACAGAGACCAGAGATaGCAGATCTCCCTGGAGCTACAGCCTTCCTCTGTGAGTCCCGAG +
Preference number: 1 (lower is better)
Translates to: VRHVHISGRTYRDQR*QISLELQPSSVSPE
Trigger: CTCGGGACTCACAGAGGAAGGCTGTAGCTCCAGGGAGATCTGCCATCTCTGGTCTCTGTAAGTGCGCCCACTGATGTGCACATGCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
3UTR GCA 90 bp GGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATaGTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACTGC +
Preference number: 1 (lower is better)
Translates to: GVREGDKLPHRCWAS*LDPLGIRAASTRDC
Trigger: GCAGTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
3UTR TCA 90 bp GGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTaGCTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGG +
Preference number: 1 (lower is better)
Translates to: GIMLRSSGHQSCKYS*LLNHLSGTCVCFLR
Trigger: CCTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAGTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
3UTR GCA 90 bp TCCCATGGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATaGTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGT +
Preference number: 1 (lower is better)
Translates to: SHGTGVREGDKLPHR*WASCLDPLGIRAAS
Trigger: ACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCCATGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
3UTR CCA 90 bp CATGGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTaGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACT +
Preference number: 1 (lower is better)
Translates to: HGTGVREGDKLPHRC*ASCLDPLGIRAAST
Trigger: AGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
3UTR CCA 90 bp GCTCTTAACCACTTAGCCATCTCTCCACTTCGTACATGTAGTTCTTaGATGTGGAACCTGGATTTTCTCAAAACAATTAATTTCTGCATA +
Preference number: 1 (lower is better)
Translates to: ALNHLAISPLRTCSS*MWNLDFLKTINFCI
Trigger: TATGCAGAAATTAATTGTTTTGAGAAAATCCAGGTTCCACATCCAAGAACTACATGTACGAAGTGGAGAGATGGCTAAGTGGTTAAGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
3UTR-3UTR TCA 90 bp TCTGTGCATATGGGGGTGAGGCATGTGCACATCAGTGGGCGCACTTACAGAGACGTGAGTCCCGAGAACTaGACTCAGGCCCTCAGGAAG +
Preference number: 2 (lower is better)
Translates to: SVHMGVRHVHISGRTYRDVSPEN*TQALRK
Trigger: CTTCCTGAGGGCCTGAGTTCAGTTCTCGGGACTCAC...GTCTCTGTAAGTGCGCCCACTGATGTGCACATGCCTCACCCCCATATGCACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
3UTR-3UTR CCA 90 bp CATATGGGGGTGAGGCATGTGCACATCAGTGGGCGCACTTACAGAGACCAGAGACGTACATGTAGTTCTTaGATGTGGAACCTGGATTTT +
Preference number: 2 (lower is better)
Translates to: HMGVRHVHISGRTYRDQRRTCSS*MWNLDF
Trigger: AAAATCCAGGTTCCACATCCAAGAACTACATGTACG...TCTCTGGTCTCTGTAAGTGCGCCCACTGATGTGCACATGCCTCACCCCCATATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
3UTR-3UTR CCA 90 bp GGCATGTGCACATCAGTGGGCGCACTTACAGAGACCAGAGATGGCAGATCTCCCCTTGGATGTGGAACCTaGATTTTCTCAAAACAATTA +
Preference number: 2 (lower is better)
Translates to: GMCTSVGALTETRDGRSPLGCGT*IFSKQL
Trigger: TAATTGTTTTGAGAAAATCCAGGTTCCACATCCAAG...GGGAGATCTGCCATCTCTGGTCTCTGTAAGTGCGCCCACTGATGTGCACATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
3UTR-3UTR CCA 90 bp TATTTTGCCCAGATGTATTTAAGGGTACTTTGTGCATGCCTGGTGCTCAAGAAACTGCCACATAGATGCTaGGCATCATGCTTAGATCCT +
Preference number: 2 (lower is better)
Translates to: YFAQMYLRVLCACLVLKKLPHRC*ASCLDP
Trigger: AGGATCTAAGCATGATGCCCAGCATCTATGTGGCAG...TTTCTTGAGCACCAGGCATGCACAAAGTACCCTTAAATACATCTGGGCAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237595.2
3UTR CCA 72 bp GTGCACATCAGTGGGCGCACTTACAGAGACCAGAGATaGCAGATCTCCCTGGAGCTACAGCCTTCCTCTGTG +
Preference number: 3 (lower is better)
Translates to: VHISGRTYRDQR*QISLELQPSSV
Trigger: CACAGAGGAAGGCTGTAGCTCCAGGGAGATCTGCCATCTCTGGTCTCTGTAAGTGCGCCCACTGATGTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
3UTR CCA 72 bp TTCTGTGCATATGGGGGTGAGGCATGTGCACATCAGTaGGCGCACTTACAGAGACCAGAGATGGCAGATCTC +
Preference number: 3 (lower is better)
Translates to: FCAYGGEACAHQ*AHLQRPEMADL
Trigger: GAGATCTGCCATCTCTGGTCTCTGTAAGTGCGCCCACTGATGTGCACATGCCTCACCCCCATATGCACAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
3UTR GCA 72 bp GAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATaGTTAGATCCTCTGGGCATCAGAGCTGCAAGTACT +
Preference number: 3 (lower is better)
Translates to: EGDKLPHRCWAS*LDPLGIRAAST
Trigger: AGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
3UTR TCA 72 bp TTATTTTTATTGTGGTTAGTTCTGTGCATATGGGGGTaGGGCATGTGCACATCAGTGGGCGCACTTACAGAG +
Preference number: 3 (lower is better)
Translates to: LFLLWLVLCIWG*GMCTSVGALTE
Trigger: CTCTGTAAGTGCGCCCACTGATGTGCACATGCCTCACCCCCATATGCACAGAACTAACCACAATAAAAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
3UTR CCA 72 bp CACTTAGCCATCTCTCCACTTCGTACATGTAGTTCTTaGATGTGGAACCTGGATTTTCTCAAAACAATTAAT +
Preference number: 3 (lower is better)
Translates to: HLAISPLRTCSS*MWNLDFLKTIN
Trigger: ATTAATTGTTTTGAGAAAATCCAGGTTCCACATCCAAGAACTACATGTACGAAGTGGAGAGATGGCTAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
3UTR CCA 72 bp CTCCACTTCGTACATGTAGTTCTTGGATGTGGAACCTaGATTTTCTCAAAACAATTAATTTCTGCATACCAA +
Preference number: 3 (lower is better)
Translates to: LHFVHVVLGCGT*IFSKQLISAYQ
Trigger: TTGGTATGCAGAAATTAATTGTTTTGAGAAAATCCAGGTTCCACATCCAAGAACTACATGTACGAAGTGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR GCA 90 bp TGTGCATGCCTGGTGCTCAAGAAAGCTAGCAGAGGGCGCTGGATCCCATGGAACTGCCAACACTGCCGCTaGCTCAGCTCCAGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: CACLVLKKASRGRWIPWNCQHCR*LSSSGQ
Trigger: CTGCCCGCTGGAGCTGAGGCAGCGGCAGTGTTGGCA...GTTCCATGGGATCCAGCGCCCTCTGCTAGCTTTCTTGAGCACCAGGCATGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp TGTGCATGCCTGGTGCTCAAGAAAGCTAGCAGAGGGCGCTGGATCCCATGGAACTCCAGGGTAGGCACATaGGGAGCACTCCACCGGCCC +
Preference number: 4 (lower is better)
Translates to: CACLVLKKASRGRWIPWNSRVGT*GALHRP
Trigger: GGGCCGGTGGAGTGCTCCCCATGTGCCTACCCTGGA...GTTCCATGGGATCCAGCGCCCTCTGCTAGCTTTCTTGAGCACCAGGCATGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
CDS-3UTR TCA 90 bp CAGAGACCAGAGATGGCAGATCTCCCTGGAGCTACAGCCTTCCTCTGTGAGTCCGCTTGCCCGACGAACTaGCCACTGGAATTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: QRPEMADLPGATAFLCESACPTN*PLELRV
Trigger: GACCCGCAATTCCAGTGGTCAGTTCGTCGGGCAAGC...GGACTCACAGAGGAAGGCTGTAGCTCCAGGGAGATCTGCCATCTCTGGTCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR TCA 90 bp TTTGTGCATGCCTGGTGCTCAAGAAAGCTAGCAGAGGGCGCTGGATCCCATGGACGAACTGGATGCTGCTaGGCGCGGCTACCCCCATGT +
Preference number: 4 (lower is better)
Translates to: FVHAWCSRKLAEGAGSHGRTGCC*ARLPPC
Trigger: ACATGGGGGTAGCCGCGCTCAGCAGCATCCAGTTCG...TCCATGGGATCCAGCGCCCTCTGCTAGCTTTCTTGAGCACCAGGCATGCACAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp CATATGGGGGTGAGGCATGTGCACATCAGTGGGCGCACTTACAGAGACCAGAGACTCTCCTGCCAACACTaGCGCTGCCTCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HMGVRHVHISGRTYRDQRLSCQH*RCLSSS
Trigger: GCTGGAGCTGAGGCAGCGGCAGTGTTGGCAGGAGAG...TCTCTGGTCTCTGTAAGTGCGCCCACTGATGTGCACATGCCTCACCCCCATATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR GCA 90 bp TCTGTGCATATGGGGGTGAGGCATGTGCACATCAGTGGGCGCACTTACAGAGACGAAGCCCAGCTCTCCTaGCAACACTGCCGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: SVHMGVRHVHISGRTYRDEAQLS*QHCRCL
Trigger: GAGGCAGCGGCAGTGTTGGCAGGAGAGCTGGGCTTC...GTCTCTGTAAGTGCGCCCACTGATGTGCACATGCCTCACCCCCATATGCACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR CCA 90 bp TTTGTGCATGCCTGGTGCTCAAGAAAGCTAGCAGAGGGCGCTGGATCCCATGGACGCCACTCTAGTGCCTaGGGCCAACCCAGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: FVHAWCSRKLAEGAGSHGRHSSA*GQPSSS
Trigger: TGAGCTGCTGGGTTGGCCCCAGGCACTAGAGTGGCG...TCCATGGGATCCAGCGCCCTCTGCTAGCTTTCTTGAGCACCAGGCATGCACAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
CDS-3UTR CCA 90 bp TGTGCATGCCTGGTGCTCAAGAAAGCTAGCAGAGGGCGCTGGATCCCATGGAACCCCATGGTCTGGATGTaGTGCTGGGGTCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: CACLVLKKASRGRWIPWNPMVWM*CWGLCR
Trigger: CCTGCAGAGACCCCAGCACCACATCCAGACCATGGG...GTTCCATGGGATCCAGCGCCCTCTGCTAGCTTTCTTGAGCACCAGGCATGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp TGTGCATGCCTGGTGCTCAAGAAAGCTAGCAGAGGGCGCTGGATCCCATGGAACCAGTTCTGGGCTCAGTaGCTCCCCACTGACTACCTG +
Preference number: 4 (lower is better)
Translates to: CACLVLKKASRGRWIPWNQFWAQ*LPTDYL
Trigger: CAGGTAGTCAGTGGGGAGTCACTGAGCCCAGAACTG...GTTCCATGGGATCCAGCGCCCTCTGCTAGCTTTCTTGAGCACCAGGCATGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
CDS-3UTR TCA 90 bp TGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACGGAATTGCGGGTCACTaGGGAGGACAGCAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: CWASCLDPLGIRAASTRDGIAGH*GGQQLP
Trigger: GGGCAGCTGCTGTCCTCCTCAGTGACCCGCAATTCC...GTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp TGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACTGCGGAATTGCGGGTCACTaGGGAGGACAGCAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: WASCLDPLGIRAASTRDCGIAGH*GGQQLP
Trigger: GGGCAGCTGCTGTCCTCCTCAGTGACCCGCAATTCC...GCAGTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp TCCCGAGAACTGAACTCAGGCCCTCAGGAAGAGCAGCAACTGCTCTTAACCACTGGAATTGCGGGTCACTaGGGAGGACAGCAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SRELNSGPQEEQQLLLTTGIAGH*GGQQLP
Trigger: GGGCAGCTGCTGTCCTCCTCAGTGACCCGCAATTCC...AGTGGTTAAGAGCAGTTGCTGCTCTTCCTGAGGGCCTGAGTTCAGTTCTCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR TCA 90 bp GGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCGGAATTGCGGGTCACTaGGGAGGACAGCAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GTGVREGDKLPHRCWASCGIAGH*GGQQLP
Trigger: GGGCAGCTGCTGTCCTCCTCAGTGACCCGCAATTCC...GCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp TGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACTGCGTCGGGAGAGGCTGGTaGCCTCCTGCAGTTTCGAGG +
Preference number: 4 (lower is better)
Translates to: WASCLDPLGIRAASTRDCVGRGW*PPAVSR
Trigger: CCTCGAAACTGCAGGAGGTCACCAGCCTCTCCCGAC...GCAGTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp TTTGTGCATGCCTGGTGCTCAAGAAAGCTAGCAGAGGGCGCTGGATCCCATGGAGGAGATGACAGTGGCTaGGACGTACCATGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: FVHAWCSRKLAEGAGSHGGDDSG*DVPWQP
Trigger: GGGCTGCCATGGTACGTCTCAGCCACTGTCATCTCC...TCCATGGGATCCAGCGCCCTCTGCTAGCTTTCTTGAGCACCAGGCATGCACAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp TGTGCATGCCTGGTGCTCAAGAAAGCTAGCAGAGGGCGCTGGATCCCATGGAACTGTGGGCCAAGGAGATaGCAGTGGCTGAGACGTACC +
Preference number: 4 (lower is better)
Translates to: CACLVLKKASRGRWIPWNCGPRR*QWLRRT
Trigger: GGTACGTCTCAGCCACTGTCATCTCCTTGGCCCACA...GTTCCATGGGATCCAGCGCCCTCTGCTAGCTTTCTTGAGCACCAGGCATGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp GGCATGTGCACATCAGTGGGCGCACTTACAGAGACCAGAGATGGCAGATCTCCCGAGGAGTTCCTGTGGTaGGAAGACCCACTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: GMCTSVGALTETRDGRSPEEFLW*EDPLQC
Trigger: GCACTGGAGTGGGTCTTCTCACCACAGGAACTCCTC...GGGAGATCTGCCATCTCTGGTCTCTGTAAGTGCGCCCACTGATGTGCACATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR GCA 90 bp TGTGCATGCCTGGTGCTCAAGAAAGCTAGCAGAGGGCGCTGGATCCCATGGAACCGAACAGCAGCCACCTaGCTGTCTCTCGCCACTCTA +
Preference number: 4 (lower is better)
Translates to: CACLVLKKASRGRWIPWNRTAAT*LSLATL
Trigger: TAGAGTGGCGAGAGACAGGCAGGTGGCTGCTGTTCG...GTTCCATGGGATCCAGCGCCCTCTGCTAGCTTTCTTGAGCACCAGGCATGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
CDS-3UTR GCA 90 bp AGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTTGCCAACACTGCCGCTaGCTCAGCTCCAGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: RCWASCLDPLGIRAASTRCQHCR*LSSSGQ
Trigger: CTGCCCGCTGGAGCTGAGGCAGCGGCAGTGTTGGCA...ACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp CCACATAGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTTGCCAACACTGCCGCTaGCTCAGCTCCAGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: PHRCWASCLDPLGIRAASCQHCR*LSSSGQ
Trigger: CTGCCCGCTGGAGCTGAGGCAGCGGCAGTGTTGGCA...ACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCTATGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp AGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTCTGTGCCAACACTGCCGCTaGCTCAGCTCCAGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: REGDKLPHRCWASCLDPLCQHCR*LSSSGQ
Trigger: CTGCCCGCTGGAGCTGAGGCAGCGGCAGTGTTGGCA...CAGAGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp GGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCCTCTCCTGCCAACACTaGCGCTGCCTCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GTGVREGDKLPHRCWASCLSCQH*RCLSSS
Trigger: GCTGGAGCTGAGGCAGCGGCAGTGTTGGCAGGAGAG...GCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp TGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACCTCTCCTGCCAACACTaGCGCTGCCTCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: CWASCLDPLGIRAASTRDLSCQH*RCLSSS
Trigger: GCTGGAGCTGAGGCAGCGGCAGTGTTGGCAGGAGAG...GTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp CATGTGCACATCAGTGGGCGCACTTACAGAGACCAGAGATGGCAGATCTCCCTGATGCGGTCACCCAGATaGCGACCCATAGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: HVHISGRTYRDQRWQISLMRSPR*RPIGGR
Trigger: CCTTCCGCCTATGGGTCGGCATCTGGGTGACCGCAT...CAGGGAGATCTGCCATCTCTGGTCTCTGTAAGTGCGCCCACTGATGTGCACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR GCA 90 bp TGTGCATGCCTGGTGCTCAAGAAAGCTAGCAGAGGGCGCTGGATCCCATGGAACCAGTGCCAGGCAAAATaGGGTCACCCAGATGCCGAC +
Preference number: 4 (lower is better)
Translates to: CACLVLKKASRGRWIPWNQCQAK*GHPDAD
Trigger: GTCGGCATCTGGGTGACCGCATTTTGCCTGGCACTG...GTTCCATGGGATCCAGCGCCCTCTGCTAGCTTTCTTGAGCACCAGGCATGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp GGCATGTGCACATCAGTGGGCGCACTTACAGAGACCAGAGATGGCAGATCTCCCCTCCGTAGCCACCAGTaGCAGGCAAAATGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: GMCTSVGALTETRDGRSPLRSHQ*QAKCGH
Trigger: GTGACCGCATTTTGCCTGGCACTGGTGGCTACGGAG...GGGAGATCTGCCATCTCTGGTCTCTGTAAGTGCGCCCACTGATGTGCACATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR GCA 90 bp GCATGTGCACATCAGTGGGCGCACTTACAGAGACCAGAGATGGCAGATCTCCCTGACCTCCTTGCCGGATaGACTCAGGTGGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: ACAHQWAHLQRPEMADLPDLLAG*TQVEAG
Trigger: TCCTGCCTCCACCTGAGTGCATCCGGCAAGGAGGTC...AGGGAGATCTGCCATCTCTGGTCTCTGTAAGTGCGCCCACTGATGTGCACATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR CCA 90 bp GGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCCGCCACTCTAGTGCCTaGGGCCAACCCAGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: GTGVREGDKLPHRCWASCRHSSA*GQPSSS
Trigger: TGAGCTGCTGGGTTGGCCCCAGGCACTAGAGTGGCG...GCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
CDS-3UTR CCA 90 bp GGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCAGCTCCTTCCCAGGGTaGGAGGACCCAAGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: GTGVREGDKLPHRCWASCSSFPG*EDPRGG
Trigger: GCCTCCTCTTGGGTCCTCCCACCCTGGGAAGGAGCT...GCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp CAGAGACCAGAGATGGCAGATCTCCCTGGAGCTACAGCCTTCCTCTGTGAGTCCCCAAGAGCTTCGGTGTaGCTAGGCCCAGGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: QRPEMADLPGATAFLCESPRASV*LGPGRC
Trigger: ACACCTTCCTGGGCCTAGCCACACCGAAGCTCTTGG...GGACTCACAGAGGAAGGCTGTAGCTCCAGGGAGATCTGCCATCTCTGGTCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR CCA 90 bp TGTGCATGCCTGGTGCTCAAGAAAGCTAGCAGAGGGCGCTGGATCCCATGGAACGGTCTCCTCCTCCTCTaGCATCAGCTCATCCAGCCA +
Preference number: 4 (lower is better)
Translates to: CACLVLKKASRGRWIPWNGLLLL*HQLIQP
Trigger: TGGCTGGATGAGCTGATGCCAGAGGAGGAGGAGACC...GTTCCATGGGATCCAGCGCCCTCTGCTAGCTTTCTTGAGCACCAGGCATGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp TGTGCATGCCTGGTGCTCAAGAAAGCTAGCAGAGGGCGCTGGATCCCATGGAACCAGAAGAGGTCCAGGTaGAAGCCAGCTCCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: CACLVLKKASRGRWIPWNQKRSR*KPAPCS
Trigger: ACTGCAGGGAGCTGGCTTCCACCTGGACCTCTTCTG...GTTCCATGGGATCCAGCGCCCTCTGCTAGCTTTCTTGAGCACCAGGCATGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp CCACATAGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTGGAATTGCGGGTCACTaGGGAGGACAGCAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PHRCWASCLDPLGIRAASGIAGH*GGQQLP
Trigger: GGGCAGCTGCTGTCCTCCTCAGTGACCCGCAATTCC...ACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCTATGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp AGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGGAATTGCGGGTCACTaGGGAGGACAGCAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: RCWASCLDPLGIRAASTRGIAGH*GGQQLP
Trigger: GGGCAGCTGCTGTCCTCCTCAGTGACCCGCAATTCC...ACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp TGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACTGCGCTTGCCCGACGAACTaGCCACTGGAATTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: WASCLDPLGIRAASTRDCACPTN*PLELRV
Trigger: GACCCGCAATTCCAGTGGTCAGTTCGTCGGGCAAGC...GCAGTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp CTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGGTCTCCACACTGTGTCGGGAGAGGCTGGTaGCCTCCTGCAGTTTCGAGG +
Preference number: 4 (lower is better)
Translates to: LLNHLSGTCVCFLRSPHCVGRGW*PPAVSR
Trigger: CCTCGAAACTGCAGGAGGTCACCAGCCTCTCCCGAC...ACAGTGTGGAGACCTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp AGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGTCGGGAGAGGCTGGTaGCCTCCTGCAGTTTCGAGG +
Preference number: 4 (lower is better)
Translates to: RCWASCLDPLGIRAASTRVGRGW*PPAVSR
Trigger: CCTCGAAACTGCAGGAGGTCACCAGCCTCTCCCGAC...ACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp GTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTTGCCAACACTGCCGCTaGCTCAGCTCCAGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: VREGDKLPHRCWASCLDPCQHCR*LSSSGQ
Trigger: CTGCCCGCTGGAGCTGAGGCAGCGGCAGTGTTGGCA...AGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp CTGCATACCAATCTTTCAGTTCACCCCACCTGTGTCTGTTTCCTGAGGTCTCCATGCCAACACTGCCGCTaGCTCAGCTCCAGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: LHTNLSVHPTCVCFLRSPCQHCR*LSSSGQ
Trigger: CTGCCCGCTGGAGCTGAGGCAGCGGCAGTGTTGGCA...TGGAGACCTCAGGAAACAGACACAGGTGGGGTGAACTGAAAGATTGGTATGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR GCA 90 bp CTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGGTCTCCACACTGTCTCTCCTGCCAACACTaGCGCTGCCTCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LLNHLSGTCVCFLRSPHCLSCQH*RCLSSS
Trigger: GCTGGAGCTGAGGCAGCGGCAGTGTTGGCAGGAGAG...ACAGTGTGGAGACCTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp CTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGGTCTCCACACTGTGAAGCCCAGCTCTCCTaGCAACACTGCCGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: LLNHLSGTCVCFLRSPHCEAQLS*QHCRCL
Trigger: GAGGCAGCGGCAGTGTTGGCAGGAGAGCTGGGCTTC...ACAGTGTGGAGACCTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp GAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTGAAGCCCAGCTCTCCTaGCAACACTGCCGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: ELELGRVISCHIDAGHHAEAQLS*QHCRCL
Trigger: GAGGCAGCGGCAGTGTTGGCAGGAGAGCTGGGCTTC...AGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp AGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTCTGGAAGCCCAGCTCTCCTaGCAACACTGCCGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: REGDKLPHRCWASCLDPLEAQLS*QHCRCL
Trigger: GAGGCAGCGGCAGTGTTGGCAGGAGAGCTGGGCTTC...CAGAGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp CATGTGCACATCAGTGGGCGCACTTACAGAGACCAGAGATGGCAGATCTCCCTGGAGGAGGACAGCAGCTaGCCGTCCCATCTCATGGTA +
Preference number: 4 (lower is better)
Translates to: HVHISGRTYRDQRWQISLEEDSS*PSHLMV
Trigger: TACCATGAGATGGGACGGGCAGCTGCTGTCCTCCTC...CAGGGAGATCTGCCATCTCTGGTCTCTGTAAGTGCGCCCACTGATGTGCACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR GCA 90 bp TGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACATGCGGTCACCCAGATaGCGACCCATAGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: CWASCLDPLGIRAASTRDMRSPR*RPIGGR
Trigger: CCTTCCGCCTATGGGTCGGCATCTGGGTGACCGCAT...GTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp TGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACTGCATGCGGTCACCCAGATaGCGACCCATAGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: WASCLDPLGIRAASTRDCMRSPR*RPIGGR
Trigger: CCTTCCGCCTATGGGTCGGCATCTGGGTGACCGCAT...GCAGTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp TTTGTGCATGCCTGGTGCTCAAGAAAGCTAGCAGAGGGCGCTGGATCCCATGGACTCCGTAGCCACCAGTaGCAGGCAAAATGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: FVHAWCSRKLAEGAGSHGLRSHQ*QAKCGH
Trigger: GTGACCGCATTTTGCCTGGCACTGGTGGCTACGGAG...TCCATGGGATCCAGCGCCCTCTGCTAGCTTTCTTGAGCACCAGGCATGCACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp TGTGCATGCCTGGTGCTCAAGAAAGCTAGCAGAGGGCGCTGGATCCCATGGAACCCATGTACAGGAAGATaGCGTAGAGCACGGGCATCG +
Preference number: 4 (lower is better)
Translates to: CACLVLKKASRGRWIPWNPCTGR*RRARAS
Trigger: CGATGCCCGTGCTCTACGGCATCTTCCTGTACATGG...GTTCCATGGGATCCAGCGCCCTCTGCTAGCTTTCTTGAGCACCAGGCATGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp TGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACTGCGAAGACCCACTCCAGTaGCTTCCGGATGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: WASCLDPLGIRAASTRDCEDPLQ*LPDGHQ
Trigger: CTGGTGGCCATCCGGAAGGCACTGGAGTGGGTCTTC...GCAGTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp TGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACGAAGACCCACTCCAGTaGCTTCCGGATGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: CWASCLDPLGIRAASTRDEDPLQ*LPDGHQ
Trigger: CTGGTGGCCATCCGGAAGGCACTGGAGTGGGTCTTC...GTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp AGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTCGCCACTCTAGTGCCTaGGGCCAACCCAGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: RCWASCLDPLGIRAASTRRHSSA*GQPSSS
Trigger: TGAGCTGCTGGGTTGGCCCCAGGCACTAGAGTGGCG...ACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
CDS-3UTR CCA 90 bp TGTGCATGCCTGGTGCTCAAGAAAGCTAGCAGAGGGCGCTGGATCCCATGGAACAGACTTCGAAGCTTCTaGAGGCTGGGGAGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: CACLVLKKASRGRWIPWNRLRSF*RLGSSR
Trigger: CCTGGAACTCCCCAGCCTCCAGAAGCTTCGAAGTCT...GTTCCATGGGATCCAGCGCCCTCTGCTAGCTTTCTTGAGCACCAGGCATGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
CDS-3UTR CCA 90 bp TTTGTGCATGCCTGGTGCTCAAGAAAGCTAGCAGAGGGCGCTGGATCCCATGGAGTCTGGATGTGGTGCTaGGGTCTCTGCAGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: FVHAWCSRKLAEGAGSHGVWMWC*GLCRSK
Trigger: CTTGCTCCTGCAGAGACCCCAGCACCACATCCAGAC...TCCATGGGATCCAGCGCCCTCTGCTAGCTTTCTTGAGCACCAGGCATGCACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp TGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACTGCCCCATGGTCTGGATGTaGTGCTGGGGTCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: WASCLDPLGIRAASTRDCPMVWM*CWGLCR
Trigger: CCTGCAGAGACCCCAGCACCACATCCAGACCATGGG...GCAGTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp TCCCGAGAACTGAACTCAGGCCCTCAGGAAGAGCAGCAACTGCTCTTAACCACTCCCATGGTCTGGATGTaGTGCTGGGGTCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SRELNSGPQEEQQLLLTTPMVWM*CWGLCR
Trigger: CCTGCAGAGACCCCAGCACCACATCCAGACCATGGG...AGTGGTTAAGAGCAGTTGCTGCTCTTCCTGAGGGCCTGAGTTCAGTTCTCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR CCA 90 bp CTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGGTCTCCACACTGTAGCTCCTTCCCAGGGTaGGAGGACCCAAGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LLNHLSGTCVCFLRSPHCSSFPG*EDPRGG
Trigger: GCCTCCTCTTGGGTCCTCCCACCCTGGGAAGGAGCT...ACAGTGTGGAGACCTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp CCACATAGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTAGCTCCTTCCCAGGGTaGGAGGACCCAAGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: PHRCWASCLDPLGIRAASSSFPG*EDPRGG
Trigger: GCCTCCTCTTGGGTCCTCCCACCCTGGGAAGGAGCT...ACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCTATGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp GCATGTGCACATCAGTGGGCGCACTTACAGAGACCAGAGATGGCAGATCTCCCTGGTCTCCTCCTCCTCTaGCATCAGCTCATCCAGCCA +
Preference number: 4 (lower is better)
Translates to: ACAHQWAHLQRPEMADLPGLLLL*HQLIQP
Trigger: TGGCTGGATGAGCTGATGCCAGAGGAGGAGGAGACC...AGGGAGATCTGCCATCTCTGGTCTCTGTAAGTGCGCCCACTGATGTGCACATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR CCA 90 bp TTTGTGCATGCCTGGTGCTCAAGAAAGCTAGCAGAGGGCGCTGGATCCCATGGAAGGATAGTGAGGGGCTaGCCTGCCATCAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: FVHAWCSRKLAEGAGSHGRIVRG*PAIRQK
Trigger: CTTCTGCCTGATGGCAGGCCAGCCCCTCACTATCCT...TCCATGGGATCCAGCGCCCTCTGCTAGCTTTCTTGAGCACCAGGCATGCACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000236124.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp TGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACCAGTTCTGGGCTCAGTaGCTCCCCACTGACTACCTG +
Preference number: 4 (lower is better)
Translates to: CWASCLDPLGIRAASTRDQFWAQ*LPTDYL
Trigger: CAGGTAGTCAGTGGGGAGTCACTGAGCCCAGAACTG...GTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
CDS-3UTR TCA 90 bp TCTGTGCATATGGGGGTGAGGCATGTGCACATCAGTGGGCGCACTTACAGAGACTGCAGGAGCAAGGCCTaGAGCTGTCCTCTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: SVHMGVRHVHISGRTYRDCRSKA*SCPLSS
Trigger: AGAACTGAGAGGACAGCTTCAGGCCTTGCTCCTGCA...GTCTCTGTAAGTGCGCCCACTGATGTGCACATGCCTCACCCCCATATGCACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR TCA 90 bp GGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCACTCTCTGCAGGGCCTaGTGCCCATGGTCTGGATGT +
Preference number: 4 (lower is better)
Translates to: GTGVREGDKLPHRCWASCTLCRA*CPWSGC
Trigger: ACATCCAGACCATGGGCATCAGGCCCTGCAGAGAGT...GCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp TACAGAGACCAGAGATGGCAGATCTCCCTGGAGCTACAGCCTTCCTCTGTGAGTACTCTCTGCAGGGCCTaGTGCCCATGGTCTGGATGT +
Preference number: 4 (lower is better)
Translates to: YRDQRWQISLELQPSSVSTLCRA*CPWSGC
Trigger: ACATCCAGACCATGGGCATCAGGCCCTGCAGAGAGT...ACTCACAGAGGAAGGCTGTAGCTCCAGGGAGATCTGCCATCTCTGGTCTCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR TCA 90 bp AGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTCTGGCTTGCCCGACGAACTaGCCACTGGAATTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: REGDKLPHRCWASCLDPLACPTN*PLELRV
Trigger: GACCCGCAATTCCAGTGGTCAGTTCGTCGGGCAAGC...CAGAGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp CCACATAGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTGCTTGCCCGACGAACTaGCCACTGGAATTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: PHRCWASCLDPLGIRAASACPTN*PLELRV
Trigger: GACCCGCAATTCCAGTGGTCAGTTCGTCGGGCAAGC...ACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCTATGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp GGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATGTCGGGAGAGGCTGGTaGCCTCCTGCAGTTTCGAGG +
Preference number: 4 (lower is better)
Translates to: GVREGDKLPHRCWASCLDVGRGW*PPAVSR
Trigger: CCTCGAAACTGCAGGAGGTCACCAGCCTCTCCCGAC...ATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp ACCAATCTTTCAGTTCACCCCACCTGTGTCTGTTTCCTGAGGTCTCCACACTGTGTCGGGAGAGGCTGGTaGCCTCCTGCAGTTTCGAGG +
Preference number: 4 (lower is better)
Translates to: TNLSVHPTCVCFLRSPHCVGRGW*PPAVSR
Trigger: CCTCGAAACTGCAGGAGGTCACCAGCCTCTCCCGAC...ACAGTGTGGAGACCTCAGGAAACAGACACAGGTGGGGTGAACTGAAAGATTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR TCA 90 bp ATGGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGTCGGGAGAGGCTGGTaGCCTCCTGCAGTTTCGAGG +
Preference number: 4 (lower is better)
Translates to: MELELGRVISCHIDAGHHVGRGW*PPAVSR
Trigger: CCTCGAAACTGCAGGAGGTCACCAGCCTCTCCCGAC...ATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp CTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGGTCTCCACACTGTGGAGATGACAGTGGCTaGGACGTACCATGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LLNHLSGTCVCFLRSPHCGDDSG*DVPWQP
Trigger: GGGCTGCCATGGTACGTCTCAGCCACTGTCATCTCC...ACAGTGTGGAGACCTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp TGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACTGCTCAGCCTCTGTTCCCTaGTGCCCAGGAAATTGGGGG +
Preference number: 4 (lower is better)
Translates to: WASCLDPLGIRAASTRDCSASVP*CPGNWG
Trigger: CCCCCAATTTCCTGGGCATCAGGGAACAGAGGCTGA...GCAGTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp TGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACTCAGCCTCTGTTCCCTaGTGCCCAGGAAATTGGGGG +
Preference number: 4 (lower is better)
Translates to: CWASCLDPLGIRAASTRDSASVP*CPGNWG
Trigger: CCCCCAATTTCCTGGGCATCAGGGAACAGAGGCTGA...GTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp ATGGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATCGAACTGGATGCTGCTaGGCGCGGCTACCCCCATGT +
Preference number: 4 (lower is better)
Translates to: MELELGRVISCHIDAGHHRTGCC*ARLPPC
Trigger: ACATGGGGGTAGCCGCGCTCAGCAGCATCCAGTTCG...ATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp GGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCGAACTGGATGCTGCTaGGCGCGGCTACCCCCATGT +
Preference number: 4 (lower is better)
Translates to: GVREGDKLPHRCWASCLDRTGCC*ARLPPC
Trigger: ACATGGGGGTAGCCGCGCTCAGCAGCATCCAGTTCG...ATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp TGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACTGCTTCCGGCGCACGTCCTaGATAAGACCCCCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: WASCLDPLGIRAASTRDCFRRTS*IRPPKS
Trigger: GCTCTTTGGGGGTCTTATTCAGGACGTGCGCCGGAA...GCAGTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp TGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACTGCCGAACAGCAGCCACCTaGCTGTCTCTCGCCACTCTA +
Preference number: 4 (lower is better)
Translates to: WASCLDPLGIRAASTRDCRTAAT*LSLATL
Trigger: TAGAGTGGCGAGAGACAGGCAGGTGGCTGCTGTTCG...GCAGTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
CDS-3UTR GCA 90 bp TGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACTGCATGGTCTGGATGTGGTaGTGGGGTCTCTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: WASCLDPLGIRAASTRDCMVWMW*WGLCRS
Trigger: GCTCCTGCAGAGACCCCAGCACCACATCCAGACCAT...GCAGTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp TACAGAGACCAGAGATGGCAGATCTCCCTGGAGCTACAGCCTTCCTCTGTGAGTATGGTCTGGATGTGGTaGTGGGGTCTCTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: YRDQRWQISLELQPSSVSMVWMW*WGLCRS
Trigger: GCTCCTGCAGAGACCCCAGCACCACATCCAGACCAT...ACTCACAGAGGAAGGCTGTAGCTCCAGGGAGATCTGCCATCTCTGGTCTCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR GCA 90 bp TGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACATGGTCTGGATGTGGTaGTGGGGTCTCTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: CWASCLDPLGIRAASTRDMVWMW*WGLCRS
Trigger: GCTCCTGCAGAGACCCCAGCACCACATCCAGACCAT...GTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp CAAGTACTCGTGACTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGCTCTCCTGCCAACACTaGCGCTGCCTCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QVLVTAEPSLWYLCLFPELSCQH*RCLSSS
Trigger: GCTGGAGCTGAGGCAGCGGCAGTGTTGGCAGGAGAG...CTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAGTCACGAGTACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp ATGGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGAAGCCCAGCTCTCCTaGCAACACTGCCGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: MELELGRVISCHIDAGHHEAQLS*QHCRCL
Trigger: GAGGCAGCGGCAGTGTTGGCAGGAGAGCTGGGCTTC...ATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp TGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACGAGGAGGACAGCAGCTaGCCGTCCCATCTCATGGTA +
Preference number: 4 (lower is better)
Translates to: CWASCLDPLGIRAASTRDEEDSS*PSHLMV
Trigger: TACCATGAGATGGGACGGGCAGCTGCTGTCCTCCTC...GTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp TGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACTGCGAGGAGGACAGCAGCTaGCCGTCCCATCTCATGGTA +
Preference number: 4 (lower is better)
Translates to: WASCLDPLGIRAASTRDCEEDSS*PSHLMV
Trigger: TACCATGAGATGGGACGGGCAGCTGCTGTCCTCCTC...GCAGTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp TGTGCATGCCTGGTGCTCAAGAAAGCTAGCAGAGGGCGCTGGATCCCATGGAACGAAGGCATCCAGAGCTaGCAGAAGGTCAGGAAGATG +
Preference number: 4 (lower is better)
Translates to: CACLVLKKASRGRWIPWNEGIQS*QKVRKM
Trigger: CATCTTCCTGACCTTCTGGCAGCTCTGGATGCCTTC...GTTCCATGGGATCCAGCGCCCTCTGCTAGCTTTCTTGAGCACCAGGCATGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp CAGAGACCAGAGATGGCAGATCTCCCTGGAGCTACAGCCTTCCTCTGTGAGTCCGAAGGCATCCAGAGCTaGCAGAAGGTCAGGAAGATG +
Preference number: 4 (lower is better)
Translates to: QRPEMADLPGATAFLCESEGIQS*QKVRKM
Trigger: CATCTTCCTGACCTTCTGGCAGCTCTGGATGCCTTC...GGACTCACAGAGGAAGGCTGTAGCTCCAGGGAGATCTGCCATCTCTGGTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR GCA 90 bp CTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGGTCTCCACACTGTGACCTCCTTGCCGGATaGACTCAGGTGGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LLNHLSGTCVCFLRSPHCDLLAG*TQVEAG
Trigger: TCCTGCCTCCACCTGAGTGCATCCGGCAAGGAGGTC...ACAGTGTGGAGACCTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp CCACATAGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTGACCTCCTTGCCGGATaGACTCAGGTGGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: PHRCWASCLDPLGIRAASDLLAG*TQVEAG
Trigger: TCCTGCCTCCACCTGAGTGCATCCGGCAAGGAGGTC...ACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCTATGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp AGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACCTCCTTGCCGGATaGACTCAGGTGGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: RCWASCLDPLGIRAASTRDLLAG*TQVEAG
Trigger: TCCTGCCTCCACCTGAGTGCATCCGGCAAGGAGGTC...ACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp GAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTGACCTCCTTGCCGGATaGACTCAGGTGGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: ELELGRVISCHIDAGHHADLLAG*TQVEAG
Trigger: TCCTGCCTCCACCTGAGTGCATCCGGCAAGGAGGTC...AGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp GGCATGTGCACATCAGTGGGCGCACTTACAGAGACCAGAGATGGCAGATCTCCCAAGCCAGCTCCCTTCTaGAGTCTGTATTCTGCACGG +
Preference number: 4 (lower is better)
Translates to: GMCTSVGALTETRDGRSPKPAPF*SLYSAR
Trigger: CCGTGCAGAATACAGACTGCAGAAGGGAGCTGGCTT...GGGAGATCTGCCATCTCTGGTCTCTGTAAGTGCGCCCACTGATGTGCACATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR GCA 90 bp TGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACTGCCTGCTCAGAGGCACATaGCGCAGGAGCAGCATGTCT +
Preference number: 4 (lower is better)
Translates to: WASCLDPLGIRAASTRDCLLRGT*RRSSMS
Trigger: AGACATGCTGCTCCTGCGGCATGTGCCTCTGAGCAG...GCAGTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp CCACATAGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTGAAGACCCACTCCAGTaGCTTCCGGATGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: PHRCWASCLDPLGIRAASEDPLQ*LPDGHQ
Trigger: CTGGTGGCCATCCGGAAGGCACTGGAGTGGGTCTTC...ACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCTATGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp CCACATAGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTCCCATGGTCTGGATGTaGTGCTGGGGTCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PHRCWASCLDPLGIRAASPMVWM*CWGLCR
Trigger: CCTGCAGAGACCCCAGCACCACATCCAGACCATGGG...ACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCTATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp ATGGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATAGCTCCTTCCCAGGGTaGGAGGACCCAAGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: MELELGRVISCHIDAGHHSSFPG*EDPRGG
Trigger: GCCTCCTCTTGGGTCCTCCCACCCTGGGAAGGAGCT...ATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp CTGCATACCAATCTTTCAGTTCACCCCACCTGTGTCTGTTTCCTGAGGTCTCCAAGCTCCTTCCCAGGGTaGGAGGACCCAAGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LHTNLSVHPTCVCFLRSPSSFPG*EDPRGG
Trigger: GCCTCCTCTTGGGTCCTCCCACCCTGGGAAGGAGCT...TGGAGACCTCAGGAAACAGACACAGGTGGGGTGAACTGAAAGATTGGTATGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR CCA 90 bp TTTGTGCATGCCTGGTGCTCAAGAAAGCTAGCAGAGGGCGCTGGATCCCATGGACGACGAACTGACCACTaGAATTGCGGGTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: FVHAWCSRKLAEGAGSHGRRTDH*NCGSLR
Trigger: CCTCAGTGACCCGCAATTCCAGTGGTCAGTTCGTCG...TCCATGGGATCCAGCGCCCTCTGCTAGCTTTCTTGAGCACCAGGCATGCACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp CATGTGCACATCAGTGGGCGCACTTACAGAGACCAGAGATGGCAGATCTCCCTGCGACGAACTGACCACTaGAATTGCGGGTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: HVHISGRTYRDQRWQISLRRTDH*NCGSLR
Trigger: CCTCAGTGACCCGCAATTCCAGTGGTCAGTTCGTCG...CAGGGAGATCTGCCATCTCTGGTCTCTGTAAGTGCGCCCACTGATGTGCACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR CCA 90 bp TGTGCATGCCTGGTGCTCAAGAAAGCTAGCAGAGGGCGCTGGATCCCATGGAACAGAAGGTCAGGAAGATaGCTTGCCCGACGAACTGAC +
Preference number: 4 (lower is better)
Translates to: CACLVLKKASRGRWIPWNRRSGR*LARRTD
Trigger: GTCAGTTCGTCGGGCAAGCCATCTTCCTGACCTTCT...GTTCCATGGGATCCAGCGCCCTCTGCTAGCTTTCTTGAGCACCAGGCATGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp TGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACTGCCAGAAGAGGTCCAGGTaGAAGCCAGCTCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: WASCLDPLGIRAASTRDCQKRSR*KPAPFC
Trigger: GCAGAAGGGAGCTGGCTTCCACCTGGACCTCTTCTG...GCAGTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
CDS-3UTR CCA 90 bp TACAGAGACCAGAGATGGCAGATCTCCCTGGAGCTACAGCCTTCCTCTGTGAGTACCTGTTCTCGGGGATaGTCTCCTCCTCCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: YRDQRWQISLELQPSSVSTCSRG*SPPPLA
Trigger: TGCCAGAGGAGGAGGAGACCATCCCCGAGAACAGGT...ACTCACAGAGGAAGGCTGTAGCTCCAGGGAGATCTGCCATCTCTGGTCTCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR CCA 90 bp GGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCACCTGTTCTCGGGGATaGTCTCCTCCTCCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: GTGVREGDKLPHRCWASCTCSRG*SPPPLA
Trigger: TGCCAGAGGAGGAGGAGACCATCCCCGAGAACAGGT...GCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp TGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACTGCCAGCCTCTGTTCCCATaGCAGCCCAAGTGCCGATGT +
Preference number: 4 (lower is better)
Translates to: WASCLDPLGIRAASTRDCQPLFP*QPKCRC
Trigger: ACATCGGCACTTGGGCTGCCATGGGAACAGAGGCTG...GCAGTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236126.2
CDS-3UTR TCA 90 bp TGTGCATGCCTGGTGCTCAAGAAAGCTAGCAGAGGGCGCTGGATCCCATGGAACACTGTCCGGTTCCTCTaGGTGAGCATTTTCATGAGC +
Preference number: 4 (lower is better)
Translates to: CACLVLKKASRGRWIPWNTVRFL*VSIFMS
Trigger: GCTCATGAAAATGCTCACTCAGAGGAACCGGACAGT...GTTCCATGGGATCCAGCGCCCTCTGCTAGCTTTCTTGAGCACCAGGCATGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
CDS-3UTR TCA 90 bp CTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGGTCTCCACACTGTCAGTTCTGGGCTCAGTaGCTCCCCACTGACTACCTG +
Preference number: 4 (lower is better)
Translates to: LLNHLSGTCVCFLRSPHCQFWAQ*LPTDYL
Trigger: CAGGTAGTCAGTGGGGAGTCACTGAGCCCAGAACTG...ACAGTGTGGAGACCTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
CDS-3UTR TCA 90 bp CCACATAGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTCAGTTCTGGGCTCAGTaGCTCCCCACTGACTACCTG +
Preference number: 4 (lower is better)
Translates to: PHRCWASCLDPLGIRAASQFWAQ*LPTDYL
Trigger: CAGGTAGTCAGTGGGGAGTCACTGAGCCCAGAACTG...ACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCTATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
CDS-3UTR TCA 90 bp AGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTACTCTCTGCAGGGCCTaGTGCCCATGGTCTGGATGT +
Preference number: 4 (lower is better)
Translates to: RCWASCLDPLGIRAASTRTLCRA*CPWSGC
Trigger: ACATCCAGACCATGGGCATCAGGCCCTGCAGAGAGT...ACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp CTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGGTCTCCACACTGTACTCTCTGCAGGGCCTaGTGCCCATGGTCTGGATGT +
Preference number: 4 (lower is better)
Translates to: LLNHLSGTCVCFLRSPHCTLCRA*CPWSGC
Trigger: ACATCCAGACCATGGGCATCAGGCCCTGCAGAGAGT...ACAGTGTGGAGACCTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp GGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATGCTTGCCCGACGAACTaGCCACTGGAATTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: GVREGDKLPHRCWASCLDACPTN*PLELRV
Trigger: GACCCGCAATTCCAGTGGTCAGTTCGTCGGGCAAGC...ATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp AGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTCAGGATGGCCAGGACTaGGGAAAAGTCGCCCAACAC +
Preference number: 4 (lower is better)
Translates to: RCWASCLDPLGIRAASTRQDGQD*GKVAQH
Trigger: GTGTTGGGCGACTTTTCCTCAGTCCTGGCCATCCTG...ACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp CCACATAGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTCAGGATGGCCAGGACTaGGGAAAAGTCGCCCAACAC +
Preference number: 4 (lower is better)
Translates to: PHRCWASCLDPLGIRAASQDGQD*GKVAQH
Trigger: GTGTTGGGCGACTTTTCCTCAGTCCTGGCCATCCTG...ACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCTATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp GCATGTGCACATCAGTGGGCGCACTTACAGAGACCAGAGATGGCAGATCTCCCTGCCCAAGTGCCGATGTaGACAGCATCAAAACAGCCA +
Preference number: 4 (lower is better)
Translates to: ACAHQWAHLQRPEMADLPAQVPM*TASKQP
Trigger: TGGCTGTTTTGATGCTGTTCACATCGGCACTTGGGC...AGGGAGATCTGCCATCTCTGGTCTCTGTAAGTGCGCCCACTGATGTGCACATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR TCA 90 bp CAAGTACTCGTGACTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGGGAGATGACAGTGGCTaGGACGTACCATGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: QVLVTAEPSLWYLCLFPEGDDSG*DVPWQP
Trigger: GGGCTGCCATGGTACGTCTCAGCCACTGTCATCTCC...CTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAGTCACGAGTACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp GAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTGTGGGCCAAGGAGATaGCAGTGGCTGAGACGTACC +
Preference number: 4 (lower is better)
Translates to: ELELGRVISCHIDAGHHACGPRR*QWLRRT
Trigger: GGTACGTCTCAGCCACTGTCATCTCCTTGGCCCACA...AGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp CCACATAGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTTGTGGGCCAAGGAGATaGCAGTGGCTGAGACGTACC +
Preference number: 4 (lower is better)
Translates to: PHRCWASCLDPLGIRAASCGPRR*QWLRRT
Trigger: GGTACGTCTCAGCCACTGTCATCTCCTTGGCCCACA...ACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCTATGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp GAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTCAGCCTCTGTTCCCTaGTGCCCAGGAAATTGGGGG +
Preference number: 4 (lower is better)
Translates to: ELELGRVISCHIDAGHHASASVP*CPGNWG
Trigger: CCCCCAATTTCCTGGGCATCAGGGAACAGAGGCTGA...AGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp CTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGGTCTCCACACTGTTCAGCCTCTGTTCCCTaGTGCCCAGGAAATTGGGGG +
Preference number: 4 (lower is better)
Translates to: LLNHLSGTCVCFLRSPHCSASVP*CPGNWG
Trigger: CCCCCAATTTCCTGGGCATCAGGGAACAGAGGCTGA...ACAGTGTGGAGACCTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp GGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCCCAGGCCCAGTAACATaGGTGGGAAGACAATGGCTG +
Preference number: 4 (lower is better)
Translates to: GTGVREGDKLPHRCWASCPGPVT*VGRQWL
Trigger: CAGCCATTGTCTTCCCACTCATGTTACTGGGCCTGG...GCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp AGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTCTGGAGGAGTTCCTGTGGTaGGAAGACCCACTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: REGDKLPHRCWASCLDPLEEFLW*EDPLQC
Trigger: GCACTGGAGTGGGTCTTCTCACCACAGGAACTCCTC...CAGAGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp CCACATAGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTGAGGAGTTCCTGTGGTaGGAAGACCCACTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: PHRCWASCLDPLGIRAASEEFLW*EDPLQC
Trigger: GCACTGGAGTGGGTCTTCTCACCACAGGAACTCCTC...ACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCTATGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp AGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTCTGTTCCGGCGCACGTCCTaGATAAGACCCCCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: REGDKLPHRCWASCLDPLFRRTS*IRPPKS
Trigger: GCTCTTTGGGGGTCTTATTCAGGACGTGCGCCGGAA...CAGAGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp GAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTTCCGGCGCACGTCCTaGATAAGACCCCCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: ELELGRVISCHIDAGHHAFRRTS*IRPPKS
Trigger: GCTCTTTGGGGGTCTTATTCAGGACGTGCGCCGGAA...AGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp CCACATAGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTCGAACAGCAGCCACCTaGCTGTCTCTCGCCACTCTA +
Preference number: 4 (lower is better)
Translates to: PHRCWASCLDPLGIRAASRTAAT*LSLATL
Trigger: TAGAGTGGCGAGAGACAGGCAGGTGGCTGCTGTTCG...ACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCTATGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
CDS-3UTR GCA 90 bp CTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGGTCTCCACACTGTCGAACAGCAGCCACCTaGCTGTCTCTCGCCACTCTA +
Preference number: 4 (lower is better)
Translates to: LLNHLSGTCVCFLRSPHCRTAAT*LSLATL
Trigger: TAGAGTGGCGAGAGACAGGCAGGTGGCTGCTGTTCG...ACAGTGTGGAGACCTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
CDS-3UTR GCA 90 bp AGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTATGGTCTGGATGTGGTaGTGGGGTCTCTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: RCWASCLDPLGIRAASTRMVWMW*WGLCRS
Trigger: GCTCCTGCAGAGACCCCAGCACCACATCCAGACCAT...ACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp CCACATAGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTGAGGAGGACAGCAGCTaGCCGTCCCATCTCATGGTA +
Preference number: 4 (lower is better)
Translates to: PHRCWASCLDPLGIRAASEEDSS*PSHLMV
Trigger: TACCATGAGATGGGACGGGCAGCTGCTGTCCTCCTC...ACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCTATGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp AGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGAGGAGGACAGCAGCTaGCCGTCCCATCTCATGGTA +
Preference number: 4 (lower is better)
Translates to: RCWASCLDPLGIRAASTREEDSS*PSHLMV
Trigger: TACCATGAGATGGGACGGGCAGCTGCTGTCCTCCTC...ACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp TGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACAGAGCTGTCACCTCCTaGAGGAAGGCATCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: CWASCLDPLGIRAASTRDRAVTS*RKASRA
Trigger: AGCTCTGGATGCCTTCCTGCAGGAGGTGACAGCTCT...GTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp TGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACTGCAGAGCTGTCACCTCCTaGAGGAAGGCATCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: WASCLDPLGIRAASTRDCRAVTS*RKASRA
Trigger: AGCTCTGGATGCCTTCCTGCAGGAGGTGACAGCTCT...GCAGTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp GTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTATGCGGTCACCCAGATaGCGACCCATAGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: VREGDKLPHRCWASCLDPMRSPR*RPIGGR
Trigger: CCTTCCGCCTATGGGTCGGCATCTGGGTGACCGCAT...AGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp CAAGTACTCGTGACTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGATGCGGTCACCCAGATaGCGACCCATAGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: QVLVTAEPSLWYLCLFPEMRSPR*RPIGGR
Trigger: CCTTCCGCCTATGGGTCGGCATCTGGGTGACCGCAT...CTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAGTCACGAGTACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp GGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATATGCGGTCACCCAGATaGCGACCCATAGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: GVREGDKLPHRCWASCLDMRSPR*RPIGGR
Trigger: CCTTCCGCCTATGGGTCGGCATCTGGGTGACCGCAT...ATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp GAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTCAGTGCCAGGCAAAATaGGGTCACCCAGATGCCGAC +
Preference number: 4 (lower is better)
Translates to: ELELGRVISCHIDAGHHAQCQAK*GHPDAD
Trigger: GTCGGCATCTGGGTGACCGCATTTTGCCTGGCACTG...AGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp AGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTCTGCTCCGTAGCCACCAGTaGCAGGCAAAATGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: REGDKLPHRCWASCLDPLLRSHQ*QAKCGH
Trigger: GTGACCGCATTTTGCCTGGCACTGGTGGCTACGGAG...CAGAGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp TGTGCATGCCTGGTGCTCAAGAAAGCTAGCAGAGGGCGCTGGATCCCATGGAACACGTGTTTCCTCCTGTaGCTGGGTATTGACAGAAGC +
Preference number: 4 (lower is better)
Translates to: CACLVLKKASRGRWIPWNTCFLL*LGIDRS
Trigger: GCTTCTGTCAATACCCAGGCACAGGAGGAAACACGT...GTTCCATGGGATCCAGCGCCCTCTGCTAGCTTTCTTGAGCACCAGGCATGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp CATGTGCACATCAGTGGGCGCACTTACAGAGACCAGAGATGGCAGATCTCCCTGCAGGGATGCAGGCTTTaGTCTCTCTCCGAAGACTGT +
Preference number: 4 (lower is better)
Translates to: HVHISGRTYRDQRWQISLQGCRL*SLSEDC
Trigger: ACAGTCTTCGGAGAGAGAGCAAAGCCTGCATCCCTG...CAGGGAGATCTGCCATCTCTGGTCTCTGTAAGTGCGCCCACTGATGTGCACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR GCA 90 bp AGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTCTGCTCAGAGGCACATaGCGCAGGAGCAGCATGTCT +
Preference number: 4 (lower is better)
Translates to: RCWASCLDPLGIRAASTRLLRGT*RRSSMS
Trigger: AGACATGCTGCTCCTGCGGCATGTGCCTCTGAGCAG...ACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp CCACATAGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTCTGCTCAGAGGCACATaGCGCAGGAGCAGCATGTCT +
Preference number: 4 (lower is better)
Translates to: PHRCWASCLDPLGIRAASLLRGT*RRSSMS
Trigger: AGACATGCTGCTCCTGCGGCATGTGCCTCTGAGCAG...ACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCTATGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp ACCAATCTTTCAGTTCACCCCACCTGTGTCTGTTTCCTGAGGTCTCCACACTGTGAAGACCCACTCCAGTaGCTTCCGGATGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: TNLSVHPTCVCFLRSPHCEDPLQ*LPDGHQ
Trigger: CTGGTGGCCATCCGGAAGGCACTGGAGTGGGTCTTC...ACAGTGTGGAGACCTCAGGAAACAGACACAGGTGGGGTGAACTGAAAGATTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR GCA 90 bp CAAGTACTCGTGACTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGGAAGACCCACTCCAGTaGCTTCCGGATGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: QVLVTAEPSLWYLCLFPEEDPLQ*LPDGHQ
Trigger: CTGGTGGCCATCCGGAAGGCACTGGAGTGGGTCTTC...CTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAGTCACGAGTACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp GTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTGAAGACCCACTCCAGTaGCTTCCGGATGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: VREGDKLPHRCWASCLDPEDPLQ*LPDGHQ
Trigger: CTGGTGGCCATCCGGAAGGCACTGGAGTGGGTCTTC...AGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp TTTGTGCATGCCTGGTGCTCAAGAAAGCTAGCAGAGGGCGCTGGATCCCATGGAAGCCTGCCTGTCCTTTaGAATTCTGGGATGGGTGTG +
Preference number: 4 (lower is better)
Translates to: FVHAWCSRKLAEGAGSHGSLPVL*NSGMGV
Trigger: CACACCCATCCCAGAATTGCAAAGGACAGGCAGGCT...TCCATGGGATCCAGCGCCCTCTGCTAGCTTTCTTGAGCACCAGGCATGCACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000236124.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp TGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACAGACTTCGAAGCTTCTaGAGGCTGGGGAGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: CWASCLDPLGIRAASTRDRLRSF*RLGSSR
Trigger: CCTGGAACTCCCCAGCCTCCAGAAGCTTCGAAGTCT...GTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
CDS-3UTR CCA 90 bp CTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGGTCTCCACACTGTGTCTGGATGTGGTGCTaGGGTCTCTGCAGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: LLNHLSGTCVCFLRSPHCVWMWC*GLCRSK
Trigger: CTTGCTCCTGCAGAGACCCCAGCACCACATCCAGAC...ACAGTGTGGAGACCTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp AGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGTCTGGATGTGGTGCTaGGGTCTCTGCAGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: RCWASCLDPLGIRAASTRVWMWC*GLCRSK
Trigger: CTTGCTCCTGCAGAGACCCCAGCACCACATCCAGAC...ACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp GTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTCCCATGGTCTGGATGTaGTGCTGGGGTCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VREGDKLPHRCWASCLDPPMVWM*CWGLCR
Trigger: CCTGCAGAGACCCCAGCACCACATCCAGACCATGGG...AGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp GGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCCATGGTCTGGATGTaGTGCTGGGGTCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GVREGDKLPHRCWASCLDPMVWM*CWGLCR
Trigger: CCTGCAGAGACCCCAGCACCACATCCAGACCATGGG...ATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp TGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACCGACGAACTGACCACTaGAATTGCGGGTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: CWASCLDPLGIRAASTRDRRTDH*NCGSLR
Trigger: CCTCAGTGACCCGCAATTCCAGTGGTCAGTTCGTCG...GTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp GCATGTGCACATCAGTGGGCGCACTTACAGAGACCAGAGATGGCAGATCTCCCTAGAAGGTCAGGAAGATaGCTTGCCCGACGAACTGAC +
Preference number: 4 (lower is better)
Translates to: ACAHQWAHLQRPEMADLPRRSGR*LARRTD
Trigger: GTCAGTTCGTCGGGCAAGCCATCTTCCTGACCTTCT...AGGGAGATCTGCCATCTCTGGTCTCTGTAAGTGCGCCCACTGATGTGCACATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR CCA 90 bp AGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTCCAAGAGCTTCGGTGTaGCTAGGCCCAGGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: RCWASCLDPLGIRAASTRPRASV*LGPGRC
Trigger: ACACCTTCCTGGGCCTAGCCACACCGAAGCTCTTGG...ACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp GAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTCCAAGAGCTTCGGTGTaGCTAGGCCCAGGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: ELELGRVISCHIDAGHHAPRASV*LGPGRC
Trigger: ACACCTTCCTGGGCCTAGCCACACCGAAGCTCTTGG...AGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp CTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGGTCTCCACACTGTCCAAGAGCTTCGGTGTaGCTAGGCCCAGGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: LLNHLSGTCVCFLRSPHCPRASV*LGPGRC
Trigger: ACACCTTCCTGGGCCTAGCCACACCGAAGCTCTTGG...ACAGTGTGGAGACCTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp AGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTCTGCCAAGAGCTTCGGTGTaGCTAGGCCCAGGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: REGDKLPHRCWASCLDPLPRASV*LGPGRC
Trigger: ACACCTTCCTGGGCCTAGCCACACCGAAGCTCTTGG...CAGAGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp CCACATAGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTCAGAAGAGGTCCAGGTaGAAGCCAGCTCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: PHRCWASCLDPLGIRAASQKRSR*KPAPFC
Trigger: GCAGAAGGGAGCTGGCTTCCACCTGGACCTCTTCTG...ACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCTATGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
CDS-3UTR CCA 90 bp GGCATGTGCACATCAGTGGGCGCACTTACAGAGACCAGAGATGGCAGATCTCCCCGAAGACTGTCTATGTaGGCCAAGGAGATGACAGTG +
Preference number: 4 (lower is better)
Translates to: GMCTSVGALTETRDGRSPRRLSM*AKEMTV
Trigger: CACTGTCATCTCCTTGGCCCACATAGACAGTCTTCG...GGGAGATCTGCCATCTCTGGTCTCTGTAAGTGCGCCCACTGATGTGCACATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR CCA 90 bp CTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGGTCTCCACACTGTGGTCTCCTCCTCCTCTaGCATCAGCTCATCCAGCCA +
Preference number: 4 (lower is better)
Translates to: LLNHLSGTCVCFLRSPHCGLLLL*HQLIQP
Trigger: TGGCTGGATGAGCTGATGCCAGAGGAGGAGGAGACC...ACAGTGTGGAGACCTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp CCACATAGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTGGTCTCCTCCTCCTCTaGCATCAGCTCATCCAGCCA +
Preference number: 4 (lower is better)
Translates to: PHRCWASCLDPLGIRAASGLLLL*HQLIQP
Trigger: TGGCTGGATGAGCTGATGCCAGAGGAGGAGGAGACC...ACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCTATGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp CCACATAGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACCTGTTCTCGGGGATaGTCTCCTCCTCCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: PHRCWASCLDPLGIRAASTCSRG*SPPPLA
Trigger: TGCCAGAGGAGGAGGAGACCATCCCCGAGAACAGGT...ACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCTATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp AGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTCTGACCTGTTCTCGGGGATaGTCTCCTCCTCCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: REGDKLPHRCWASCLDPLTCSRG*SPPPLA
Trigger: TGCCAGAGGAGGAGGAGACCATCCCCGAGAACAGGT...CAGAGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp TGTGCATGCCTGGTGCTCAAGAAAGCTAGCAGAGGGCGCTGGATCCCATGGAACAGCAGCTCATTTAGTTaGATGAAGAGCAGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: CACLVLKKASRGRWIPWNSSSFS*MKSRGS
Trigger: GGACCCTCTGCTCTTCATTCAACTAAATGAGCTGCT...GTTCCATGGGATCCAGCGCCCTCTGCTAGCTTTCTTGAGCACCAGGCATGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
CDS-3UTR TCA 90 bp CTGCATACCAATCTTTCAGTTCACCCCACCTGTGTCTGTTTCCTGAGGTCTCCACAGTTCTGGGCTCAGTaGCTCCCCACTGACTACCTG +
Preference number: 4 (lower is better)
Translates to: LHTNLSVHPTCVCFLRSPQFWAQ*LPTDYL
Trigger: CAGGTAGTCAGTGGGGAGTCACTGAGCCCAGAACTG...TGGAGACCTCAGGAAACAGACACAGGTGGGGTGAACTGAAAGATTGGTATGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR TCA 90 bp AGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTCTGTGCAGGAGCAAGGCCTaGAGCTGTCCTCTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: REGDKLPHRCWASCLDPLCRSKA*SCPLSS
Trigger: AGAACTGAGAGGACAGCTTCAGGCCTTGCTCCTGCA...CAGAGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp GAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTGCAGGAGCAAGGCCTaGAGCTGTCCTCTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: ELELGRVISCHIDAGHHACRSKA*SCPLSS
Trigger: AGAACTGAGAGGACAGCTTCAGGCCTTGCTCCTGCA...AGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp GGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATACTCTCTGCAGGGCCTaGTGCCCATGGTCTGGATGT +
Preference number: 4 (lower is better)
Translates to: GVREGDKLPHRCWASCLDTLCRA*CPWSGC
Trigger: ACATCCAGACCATGGGCATCAGGCCCTGCAGAGAGT...ATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp GGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCAGGATGGCCAGGACTaGGGAAAAGTCGCCCAACAC +
Preference number: 4 (lower is better)
Translates to: GVREGDKLPHRCWASCLDQDGQD*GKVAQH
Trigger: GTGTTGGGCGACTTTTCCTCAGTCCTGGCCATCCTG...ATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp ACCAATCTTTCAGTTCACCCCACCTGTGTCTGTTTCCTGAGGTCTCCACACTGTCAGGATGGCCAGGACTaGGGAAAAGTCGCCCAACAC +
Preference number: 4 (lower is better)
Translates to: TNLSVHPTCVCFLRSPHCQDGQD*GKVAQH
Trigger: GTGTTGGGCGACTTTTCCTCAGTCCTGGCCATCCTG...ACAGTGTGGAGACCTCAGGAAACAGACACAGGTGGGGTGAACTGAAAGATTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR TCA 90 bp GTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTCAGGATGGCCAGGACTaGGGAAAAGTCGCCCAACAC +
Preference number: 4 (lower is better)
Translates to: VREGDKLPHRCWASCLDPQDGQD*GKVAQH
Trigger: GTGTTGGGCGACTTTTCCTCAGTCCTGGCCATCCTG...AGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp GGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCGCCCAAGTGCCGATGTaGACAGCATCAAAACAGCCA +
Preference number: 4 (lower is better)
Translates to: GTGVREGDKLPHRCWASCAQVPM*TASKQP
Trigger: TGGCTGTTTTGATGCTGTTCACATCGGCACTTGGGC...GCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp ATGGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATTGTGGGCCAAGGAGATaGCAGTGGCTGAGACGTACC +
Preference number: 4 (lower is better)
Translates to: MELELGRVISCHIDAGHHCGPRR*QWLRRT
Trigger: GGTACGTCTCAGCCACTGTCATCTCCTTGGCCCACA...ATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp CTGCATACCAATCTTTCAGTTCACCCCACCTGTGTCTGTTTCCTGAGGTCTCCATGTGGGCCAAGGAGATaGCAGTGGCTGAGACGTACC +
Preference number: 4 (lower is better)
Translates to: LHTNLSVHPTCVCFLRSPCGPRR*QWLRRT
Trigger: GGTACGTCTCAGCCACTGTCATCTCCTTGGCCCACA...TGGAGACCTCAGGAAACAGACACAGGTGGGGTGAACTGAAAGATTGGTATGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR TCA 90 bp AGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTCCAGGCCCAGTAACATaGGTGGGAAGACAATGGCTG +
Preference number: 4 (lower is better)
Translates to: RCWASCLDPLGIRAASTRPGPVT*VGRQWL
Trigger: CAGCCATTGTCTTCCCACTCATGTTACTGGGCCTGG...ACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp CCACATAGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTCCAGGCCCAGTAACATaGGTGGGAAGACAATGGCTG +
Preference number: 4 (lower is better)
Translates to: PHRCWASCLDPLGIRAASPGPVT*VGRQWL
Trigger: CAGCCATTGTCTTCCCACTCATGTTACTGGGCCTGG...ACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCTATGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp GAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTCCAGGCCCAGTAACATaGGTGGGAAGACAATGGCTG +
Preference number: 4 (lower is better)
Translates to: ELELGRVISCHIDAGHHAPGPVT*VGRQWL
Trigger: CAGCCATTGTCTTCCCACTCATGTTACTGGGCCTGG...AGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp CAAGTACTCGTGACTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGGAGGAGTTCCTGTGGTaGGAAGACCCACTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: QVLVTAEPSLWYLCLFPEEEFLW*EDPLQC
Trigger: GCACTGGAGTGGGTCTTCTCACCACAGGAACTCCTC...CTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAGTCACGAGTACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp GGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATGAGGAGTTCCTGTGGTaGGAAGACCCACTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: GVREGDKLPHRCWASCLDEEFLW*EDPLQC
Trigger: GCACTGGAGTGGGTCTTCTCACCACAGGAACTCCTC...ATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp CAAGTACTCGTGACTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGTTCCGGCGCACGTCCTaGATAAGACCCCCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: QVLVTAEPSLWYLCLFPEFRRTS*IRPPKS
Trigger: GCTCTTTGGGGGTCTTATTCAGGACGTGCGCCGGAA...CTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAGTCACGAGTACTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp CAAGTACTCGTGACTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGATGGTCTGGATGTGGTaGTGGGGTCTCTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: QVLVTAEPSLWYLCLFPEMVWMW*WGLCRS
Trigger: GCTCCTGCAGAGACCCCAGCACCACATCCAGACCAT...CTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAGTCACGAGTACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp GGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATGAGGAGGACAGCAGCTaGCCGTCCCATCTCATGGTA +
Preference number: 4 (lower is better)
Translates to: GVREGDKLPHRCWASCLDEEDSS*PSHLMV
Trigger: TACCATGAGATGGGACGGGCAGCTGCTGTCCTCCTC...ATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp TGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACACTGACCACTGGAATTaGGGGTCACTGAGGAGGACA +
Preference number: 4 (lower is better)
Translates to: CWASCLDPLGIRAASTRDTDHWN*GSLRRT
Trigger: TGTCCTCCTCAGTGACCCGCAATTCCAGTGGTCAGT...GTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp TGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACTGCACTGACCACTGGAATTaGGGGTCACTGAGGAGGACA +
Preference number: 4 (lower is better)
Translates to: WASCLDPLGIRAASTRDCTDHWN*GSLRRT
Trigger: TGTCCTCCTCAGTGACCCGCAATTCCAGTGGTCAGT...GCAGTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp TCCCGAGAACTGAACTCAGGCCCTCAGGAAGAGCAGCAACTGCTCTTAACCACTACTGACCACTGGAATTaGGGGTCACTGAGGAGGACA +
Preference number: 4 (lower is better)
Translates to: SRELNSGPQEEQQLLLTTTDHWN*GSLRRT
Trigger: TGTCCTCCTCAGTGACCCGCAATTCCAGTGGTCAGT...AGTGGTTAAGAGCAGTTGCTGCTCTTCCTGAGGGCCTGAGTTCAGTTCTCGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR GCA 90 bp GGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCACTGACCACTGGAATTaGGGGTCACTGAGGAGGACA +
Preference number: 4 (lower is better)
Translates to: GTGVREGDKLPHRCWASCTDHWN*GSLRRT
Trigger: TGTCCTCCTCAGTGACCCGCAATTCCAGTGGTCAGT...GCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp TGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACTGCGAAGGCATCCAGAGCTaGCAGAAGGTCAGGAAGATG +
Preference number: 4 (lower is better)
Translates to: WASCLDPLGIRAASTRDCEGIQS*QKVRKM
Trigger: CATCTTCCTGACCTTCTGGCAGCTCTGGATGCCTTC...GCAGTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp AGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTCTGAGAGCTGTCACCTCCTaGAGGAAGGCATCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: REGDKLPHRCWASCLDPLRAVTS*RKASRA
Trigger: AGCTCTGGATGCCTTCCTGCAGGAGGTGACAGCTCT...CAGAGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp GGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCAGTGCCAGGCAAAATaGGGTCACCCAGATGCCGAC +
Preference number: 4 (lower is better)
Translates to: GVREGDKLPHRCWASCLDQCQAK*GHPDAD
Trigger: GTCGGCATCTGGGTGACCGCATTTTGCCTGGCACTG...ATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp ATGGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATCAGTGCCAGGCAAAATaGGGTCACCCAGATGCCGAC +
Preference number: 4 (lower is better)
Translates to: MELELGRVISCHIDAGHHQCQAK*GHPDAD
Trigger: GTCGGCATCTGGGTGACCGCATTTTGCCTGGCACTG...ATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp ACCAATCTTTCAGTTCACCCCACCTGTGTCTGTTTCCTGAGGTCTCCACACTGTCAGTGCCAGGCAAAATaGGGTCACCCAGATGCCGAC +
Preference number: 4 (lower is better)
Translates to: TNLSVHPTCVCFLRSPHCQCQAK*GHPDAD
Trigger: GTCGGCATCTGGGTGACCGCATTTTGCCTGGCACTG...ACAGTGTGGAGACCTCAGGAAACAGACACAGGTGGGGTGAACTGAAAGATTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR GCA 90 bp GGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCTCCGTAGCCACCAGTaGCAGGCAAAATGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: GVREGDKLPHRCWASCLDLRSHQ*QAKCGH
Trigger: GTGACCGCATTTTGCCTGGCACTGGTGGCTACGGAG...ATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp ATGGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATCTCCGTAGCCACCAGTaGCAGGCAAAATGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: MELELGRVISCHIDAGHHLRSHQ*QAKCGH
Trigger: GTGACCGCATTTTGCCTGGCACTGGTGGCTACGGAG...ATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp TGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACCAGGGATGCAGGCTTTaGTCTCTCTCCGAAGACTGT +
Preference number: 4 (lower is better)
Translates to: CWASCLDPLGIRAASTRDQGCRL*SLSEDC
Trigger: ACAGTCTTCGGAGAGAGAGCAAAGCCTGCATCCCTG...GTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp ATGGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATCTGCTCAGAGGCACATaGCGCAGGAGCAGCATGTCT +
Preference number: 4 (lower is better)
Translates to: MELELGRVISCHIDAGHHLLRGT*RRSSMS
Trigger: AGACATGCTGCTCCTGCGGCATGTGCCTCTGAGCAG...ATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp TACAGAGACCAGAGATGGCAGATCTCCCTGGAGCTACAGCCTTCCTCTGTGAGTAGCCTGCCTGTCCTTTaGAATTCTGGGATGGGTGTG +
Preference number: 4 (lower is better)
Translates to: YRDQRWQISLELQPSSVSSLPVL*NSGMGV
Trigger: CACACCCATCCCAGAATTGCAAAGGACAGGCAGGCT...ACTCACAGAGGAAGGCTGTAGCTCCAGGGAGATCTGCCATCTCTGGTCTCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR GCA 90 bp TGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACTGCAGCCTGCCTGTCCTTTaGAATTCTGGGATGGGTGTG +
Preference number: 4 (lower is better)
Translates to: WASCLDPLGIRAASTRDCSLPVL*NSGMGV
Trigger: CACACCCATCCCAGAATTGCAAAGGACAGGCAGGCT...GCAGTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp GGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCAGCCTGCCTGTCCTTTaGAATTCTGGGATGGGTGTG +
Preference number: 4 (lower is better)
Translates to: GTGVREGDKLPHRCWASCSLPVL*NSGMGV
Trigger: CACACCCATCCCAGAATTGCAAAGGACAGGCAGGCT...GCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp CCACATAGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTTGGAAGCCAGCTCCCTaGAGTCTGTATTCTGCACGG +
Preference number: 4 (lower is better)
Translates to: PHRCWASCLDPLGIRAASWKPAP*SLYSAR
Trigger: CCGTGCAGAATACAGACTGCAGGGAGCTGGCTTCCA...ACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCTATGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp CACTTAGCCATCTCTCCACTTCGTACATGTAGTTCTTGGATGTGGAACCTGGATCGCCACTCTAGTGCCTaGGGCCAACCCAGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: HLAISPLRTCSSWMWNLDRHSSA*GQPSSS
Trigger: TGAGCTGCTGGGTTGGCCCCAGGCACTAGAGTGGCG...ATCCAGGTTCCACATCCAAGAACTACATGTACGAAGTGGAGAGATGGCTAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR CCA 90 bp GAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTAGACTTCGAAGCTTCTaGAGGCTGGGGAGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: ELELGRVISCHIDAGHHARLRSF*RLGSSR
Trigger: CCTGGAACTCCCCAGCCTCCAGAAGCTTCGAAGTCT...AGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
CDS-3UTR CCA 90 bp GTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTGTCTGGATGTGGTGCTaGGGTCTCTGCAGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: VREGDKLPHRCWASCLDPVWMWC*GLCRSK
Trigger: CTTGCTCCTGCAGAGACCCCAGCACCACATCCAGAC...AGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp CCACATAGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTGAGATGGTAGGTATTTaGGTGGGGGAATCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: PHRCWASCLDPLGIRAASEMVGI*VGESGL
Trigger: CAGCCCGGATTCCCCCACCCAAATACCTACCATCTC...ACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCTATGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp CTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGGTCTCCACACTGTGAGATGGTAGGTATTTaGGTGGGGGAATCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: LLNHLSGTCVCFLRSPHCEMVGI*VGESGL
Trigger: CAGCCCGGATTCCCCCACCCAAATACCTACCATCTC...ACAGTGTGGAGACCTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp AGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTCTGGAGATGGTAGGTATTTaGGTGGGGGAATCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: REGDKLPHRCWASCLDPLEMVGI*VGESGL
Trigger: CAGCCCGGATTCCCCCACCCAAATACCTACCATCTC...CAGAGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp AGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGAGATGGTAGGTATTTaGGTGGGGGAATCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: RCWASCLDPLGIRAASTREMVGI*VGESGL
Trigger: CAGCCCGGATTCCCCCACCCAAATACCTACCATCTC...ACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp ATGGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATCAGAAGAGGTCCAGGTaGAAGCCAGCTCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: MELELGRVISCHIDAGHHQKRSR*KPAPFC
Trigger: GCAGAAGGGAGCTGGCTTCCACCTGGACCTCTTCTG...ATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
CDS-3UTR CCA 90 bp GGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATGGTCTCCTCCTCCTCTaGCATCAGCTCATCCAGCCA +
Preference number: 4 (lower is better)
Translates to: GVREGDKLPHRCWASCLDGLLLL*HQLIQP
Trigger: TGGCTGGATGAGCTGATGCCAGAGGAGGAGGAGACC...ATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp CAAGTACTCGTGACTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGACCTGTTCTCGGGGATaGTCTCCTCCTCCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: QVLVTAEPSLWYLCLFPETCSRG*SPPPLA
Trigger: TGCCAGAGGAGGAGGAGACCATCCCCGAGAACAGGT...CTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAGTCACGAGTACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp TGTGCATGCCTGGTGCTCAAGAAAGCTAGCAGAGGGCGCTGGATCCCATGGAACCATCCAGGAAATCACTaGTGTACCAACATGCCTTCC +
Preference number: 4 (lower is better)
Translates to: CACLVLKKASRGRWIPWNHPGNH*CTNMPS
Trigger: GGAAGGCATGTTGGTACACCAGTGATTTCCTGGATG...GTTCCATGGGATCCAGCGCCCTCTGCTAGCTTTCTTGAGCACCAGGCATGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000236124.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp AGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTACAGCTGAGAAACACTaGGGGTGTAGGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: RCWASCLDPLGIRAASTRTAEKH*GCRASR
Trigger: CCTGGATGCCCTACACCCCCAGTGTTTCTCAGCTGT...ACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp CAAGTACTCGTGACTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGAGGATAGTGAGGGGCTaGCCTGCCATCAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: QVLVTAEPSLWYLCLFPERIVRG*PAIRQK
Trigger: CTTCTGCCTGATGGCAGGCCAGCCCCTCACTATCCT...CTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAGTCACGAGTACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp GTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTAGGATAGTGAGGGGCTaGCCTGCCATCAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: VREGDKLPHRCWASCLDPRIVRG*PAIRQK
Trigger: CTTCTGCCTGATGGCAGGCCAGCCCCTCACTATCCT...AGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp TGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACTGCACTGTCCGGTTCCTCTaGGTGAGCATTTTCATGAGC +
Preference number: 4 (lower is better)
Translates to: WASCLDPLGIRAASTRDCTVRFL*VSIFMS
Trigger: GCTCATGAAAATGCTCACTCAGAGGAACCGGACAGT...GCAGTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
CDS-3UTR TCA 90 bp GGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATTGCAGGAGCAAGGCCTaGAGCTGTCCTCTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: GVREGDKLPHRCWASCLDCRSKA*SCPLSS
Trigger: AGAACTGAGAGGACAGCTTCAGGCCTTGCTCCTGCA...ATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp GTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTTGCAGGAGCAAGGCCTaGAGCTGTCCTCTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: VREGDKLPHRCWASCLDPCRSKA*SCPLSS
Trigger: AGAACTGAGAGGACAGCTTCAGGCCTTGCTCCTGCA...AGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp TGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACTGCCACGAGAAGCCTTTCTaGAAGCATTGGACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: WASCLDPLGIRAASTRDCHEKPF*KHWTLC
Trigger: GCAGAGAGTCCAATGCTTTCAGAAAGGCTTCTCGTG...GCAGTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp AGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGCCCAAGTGCCGATGTaGACAGCATCAAAACAGCCA +
Preference number: 4 (lower is better)
Translates to: RCWASCLDPLGIRAASTRAQVPM*TASKQP
Trigger: TGGCTGTTTTGATGCTGTTCACATCGGCACTTGGGC...ACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp GAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTGCCCAAGTGCCGATGTaGACAGCATCAAAACAGCCA +
Preference number: 4 (lower is better)
Translates to: ELELGRVISCHIDAGHHAAQVPM*TASKQP
Trigger: TGGCTGTTTTGATGCTGTTCACATCGGCACTTGGGC...AGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp AGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTCTGGCCCAAGTGCCGATGTaGACAGCATCAAAACAGCCA +
Preference number: 4 (lower is better)
Translates to: REGDKLPHRCWASCLDPLAQVPM*TASKQP
Trigger: TGGCTGTTTTGATGCTGTTCACATCGGCACTTGGGC...CAGAGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp GCAGCAACTGCTCTTAACCACTTAGCCATCTCTCCACTTCGTACATGTAGTTCTGGAGATGACAGTGGCTaGGACGTACCATGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: AATALNHLAISPLRTCSSGDDSG*DVPWQP
Trigger: GGGCTGCCATGGTACGTCTCAGCCACTGTCATCTCC...AGAACTACATGTACGAAGTGGAGAGATGGCTAAGTGGTTAAGAGCAGTTGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR GCA 90 bp TTTATTGTGGTTAGTTCTGTGCATATGGGGGTGAGGCATGTGCACATCAGTGGGCGAACAGCAGCCACCTaGCTGTCTCTCGCCACTCTA +
Preference number: 4 (lower is better)
Translates to: FIVVSSVHMGVRHVHISGRTAAT*LSLATL
Trigger: TAGAGTGGCGAGAGACAGGCAGGTGGCTGCTGTTCG...CCCACTGATGTGCACATGCCTCACCCCCATATGCACAGAACTAACCACAATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR GCA 90 bp GCATGTGCACATCAGTGGGCGCACTTACAGAGACCAGAGATGGCAGATCTCCCTGGAGGCAGAAAAATCTaGTGGGCAAGATCATCTCTG +
Preference number: 4 (lower is better)
Translates to: ACAHQWAHLQRPEMADLPGGRKI*WARSSL
Trigger: CAGAGATGATCTTGCCCAGCAGATTTTTCTGCCTCC...AGGGAGATCTGCCATCTCTGGTCTCTGTAAGTGCGCCCACTGATGTGCACATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR GCA 90 bp AGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTCTGGAAGGCATCCAGAGCTaGCAGAAGGTCAGGAAGATG +
Preference number: 4 (lower is better)
Translates to: REGDKLPHRCWASCLDPLEGIQS*QKVRKM
Trigger: CATCTTCCTGACCTTCTGGCAGCTCTGGATGCCTTC...CAGAGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp CTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGGTCTCCACACTGTGAAGGCATCCAGAGCTaGCAGAAGGTCAGGAAGATG +
Preference number: 4 (lower is better)
Translates to: LLNHLSGTCVCFLRSPHCEGIQS*QKVRKM
Trigger: CATCTTCCTGACCTTCTGGCAGCTCTGGATGCCTTC...ACAGTGTGGAGACCTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp ATGGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATAGAGCTGTCACCTCCTaGAGGAAGGCATCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: MELELGRVISCHIDAGHHRAVTS*RKASRA
Trigger: AGCTCTGGATGCCTTCCTGCAGGAGGTGACAGCTCT...ATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp AGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTAAGCCAGCTCCCTTCTaGAGTCTGTATTCTGCACGG +
Preference number: 4 (lower is better)
Translates to: RCWASCLDPLGIRAASTRKPAPF*SLYSAR
Trigger: CCGTGCAGAATACAGACTGCAGAAGGGAGCTGGCTT...ACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
CDS-3UTR GCA 90 bp CTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGGTCTCCACACTGTCAGGGATGCAGGCTTTaGTCTCTCTCCGAAGACTGT +
Preference number: 4 (lower is better)
Translates to: LLNHLSGTCVCFLRSPHCQGCRL*SLSEDC
Trigger: ACAGTCTTCGGAGAGAGAGCAAAGCCTGCATCCCTG...ACAGTGTGGAGACCTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp AGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTCAGGGATGCAGGCTTTaGTCTCTCTCCGAAGACTGT +
Preference number: 4 (lower is better)
Translates to: RCWASCLDPLGIRAASTRQGCRL*SLSEDC
Trigger: ACAGTCTTCGGAGAGAGAGCAAAGCCTGCATCCCTG...ACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp GTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTCCATGTACAGGAAGATaGCGTAGAGCACGGGCATCG +
Preference number: 4 (lower is better)
Translates to: VREGDKLPHRCWASCLDPPCTGR*RRARAS
Trigger: CGATGCCCGTGCTCTACGGCATCTTCCTGTACATGG...AGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp ATGGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATCCATGTACAGGAAGATaGCGTAGAGCACGGGCATCG +
Preference number: 4 (lower is better)
Translates to: MELELGRVISCHIDAGHHPCTGR*RRARAS
Trigger: CGATGCCCGTGCTCTACGGCATCTTCCTGTACATGG...ATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp GGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTGGGAAGACAATGGCTaGAGGGGTAGACTTGACTAC +
Preference number: 4 (lower is better)
Translates to: GTGVREGDKLPHRCWASCWEDNG*RGRLDY
Trigger: GTAGTCAAGTCTACCCCTGCAGCCATTGTCTTCCCA...GCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp CCACATAGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTAGCCTGCCTGTCCTTTaGAATTCTGGGATGGGTGTG +
Preference number: 4 (lower is better)
Translates to: PHRCWASCLDPLGIRAASSLPVL*NSGMGV
Trigger: CACACCCATCCCAGAATTGCAAAGGACAGGCAGGCT...ACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCTATGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp GTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTAGACTTCGAAGCTTCTaGAGGCTGGGGAGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: VREGDKLPHRCWASCLDPRLRSF*RLGSSR
Trigger: CCTGGAACTCCCCAGCCTCCAGAAGCTTCGAAGTCT...AGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
CDS-3UTR CCA 90 bp GTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTCGACGAACTGACCACTaGAATTGCGGGTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: VREGDKLPHRCWASCLDPRRTDH*NCGSLR
Trigger: CCTCAGTGACCCGCAATTCCAGTGGTCAGTTCGTCG...AGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp ATGGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATCGACGAACTGACCACTaGAATTGCGGGTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: MELELGRVISCHIDAGHHRRTDH*NCGSLR
Trigger: CCTCAGTGACCCGCAATTCCAGTGGTCAGTTCGTCG...ATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp AGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTCTGAGAAGGTCAGGAAGATaGCTTGCCCGACGAACTGAC +
Preference number: 4 (lower is better)
Translates to: REGDKLPHRCWASCLDPLRRSGR*LARRTD
Trigger: GTCAGTTCGTCGGGCAAGCCATCTTCCTGACCTTCT...CAGAGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp AGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTCCAGGCTGTAATCTCTaGGCACCTTCAGTGGCATCT +
Preference number: 4 (lower is better)
Translates to: RCWASCLDPLGIRAASTRPGCNL*APSVAS
Trigger: AGATGCCACTGAAGGTGCCCAGAGATTACAGCCTGG...ACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235181.2
CDS-3UTR CCA 90 bp TGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACTGCCAGGAGCAGCATGTCTaGCTGATGTTTCCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: WASCLDPLGIRAASTRDCQEQHV*LMFPWH
Trigger: ATGCCAAGGAAACATCAGCCAGACATGCTGCTCCTG...GCAGTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp GCATGTGCACATCAGTGGGCGCACTTACAGAGACCAGAGATGGCAGATCTCCCTCATCCAGGAAATCACTaGTGTACCAACATGCCTTCC +
Preference number: 4 (lower is better)
Translates to: ACAHQWAHLQRPEMADLPHPGNH*CTNMPS
Trigger: GGAAGGCATGTTGGTACACCAGTGATTTCCTGGATG...AGGGAGATCTGCCATCTCTGGTCTCTGTAAGTGCGCCCACTGATGTGCACATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR CCA 90 bp GTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTACAGCTGAGAAACACTaGGGGTGTAGGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: VREGDKLPHRCWASCLDPTAEKH*GCRASR
Trigger: CCTGGATGCCCTACACCCCCAGTGTTTCTCAGCTGT...AGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp GGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATACAGCTGAGAAACACTaGGGGTGTAGGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: GVREGDKLPHRCWASCLDTAEKH*GCRASR
Trigger: CCTGGATGCCCTACACCCCCAGTGTTTCTCAGCTGT...ATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp CAAGTACTCGTGACTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGACAGCTGAGAAACACTaGGGGTGTAGGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: QVLVTAEPSLWYLCLFPETAEKH*GCRASR
Trigger: CCTGGATGCCCTACACCCCCAGTGTTTCTCAGCTGT...CTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAGTCACGAGTACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp TTTATTGTGGTTAGTTCTGTGCATATGGGGGTGAGGCATGTGCACATCAGTGGGAGGATAGTGAGGGGCTaGCCTGCCATCAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: FIVVSSVHMGVRHVHISGRIVRG*PAIRQK
Trigger: CTTCTGCCTGATGGCAGGCCAGCCCCTCACTATCCT...CCCACTGATGTGCACATGCCTCACCCCCATATGCACAGAACTAACCACAATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR TCA 90 bp GAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTCACGAGAAGCCTTTCTaGAAGCATTGGACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: ELELGRVISCHIDAGHHAHEKPF*KHWTLC
Trigger: GCAGAGAGTCCAATGCTTTCAGAAAGGCTTCTCGTG...AGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp AGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTCACGAGAAGCCTTTCTaGAAGCATTGGACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: RCWASCLDPLGIRAASTRHEKPF*KHWTLC
Trigger: GCAGAGAGTCCAATGCTTTCAGAAAGGCTTCTCGTG...ACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp TGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACTGCTGTCCTCTGTGTCTTTaGGCTTTGCACTCGTCCATT +
Preference number: 4 (lower is better)
Translates to: WASCLDPLGIRAASTRDCCPLCL*ALHSSI
Trigger: AATGGACGAGTGCAAAGCTCAAAGACACAGAGGACA...GCAGTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp GGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATGCCCAAGTGCCGATGTaGACAGCATCAAAACAGCCA +
Preference number: 4 (lower is better)
Translates to: GVREGDKLPHRCWASCLDAQVPM*TASKQP
Trigger: TGGCTGTTTTGATGCTGTTCACATCGGCACTTGGGC...ATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp CACTTAGCCATCTCTCCACTTCGTACATGTAGTTCTTGGATGTGGAACCTGGATTCAGCCTCTGTTCCCTaGTGCCCAGGAAATTGGGGG +
Preference number: 4 (lower is better)
Translates to: HLAISPLRTCSSWMWNLDSASVP*CPGNWG
Trigger: CCCCCAATTTCCTGGGCATCAGGGAACAGAGGCTGA...ATCCAGGTTCCACATCCAAGAACTACATGTACGAAGTGGAGAGATGGCTAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR TCA 90 bp GGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTCTGGAGCCTTGGGCTaGTACATCAGTTCTGAATCT +
Preference number: 4 (lower is better)
Translates to: GTGVREGDKLPHRCWASCSGALG*YISSES
Trigger: AGATTCAGAACTGATGTATCAGCCCAAGGCTCCAGA...GCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp GCAGCAACTGCTCTTAACCACTTAGCCATCTCTCCACTTCGTACATGTAGTTCTCCAGGCCCAGTAACTTaGGCACAGGTGCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: AATALNHLAISPLRTCSSPGPVT*AQVPGR
Trigger: TCTTCCTGGCACCTGTGCTCAAGTTACTGGGCCTGG...AGAACTACATGTACGAAGTGGAGAGATGGCTAAGTGGTTAAGAGCAGTTGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR GCA 90 bp GGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCGGAGGCAGAAAAATCTaGTGGGCAAGATCATCTCTG +
Preference number: 4 (lower is better)
Translates to: GTGVREGDKLPHRCWASCGGRKI*WARSSL
Trigger: CAGAGATGATCTTGCCCAGCAGATTTTTCTGCCTCC...GCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp TGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACTGCGGAGGCAGAAAAATCTaGTGGGCAAGATCATCTCTG +
Preference number: 4 (lower is better)
Translates to: WASCLDPLGIRAASTRDCGGRKI*WARSSL
Trigger: CAGAGATGATCTTGCCCAGCAGATTTTTCTGCCTCC...GCAGTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp TGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACGGAGGCAGAAAAATCTaGTGGGCAAGATCATCTCTG +
Preference number: 4 (lower is better)
Translates to: CWASCLDPLGIRAASTRDGGRKI*WARSSL
Trigger: CAGAGATGATCTTGCCCAGCAGATTTTTCTGCCTCC...GTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp CAAGTACTCGTGACTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGACTGACCACTGGAATTaGGGGTCACTGAGGAGGACA +
Preference number: 4 (lower is better)
Translates to: QVLVTAEPSLWYLCLFPETDHWN*GSLRRT
Trigger: TGTCCTCCTCAGTGACCCGCAATTCCAGTGGTCAGT...CTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAGTCACGAGTACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp GGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATGAAGGCATCCAGAGCTaGCAGAAGGTCAGGAAGATG +
Preference number: 4 (lower is better)
Translates to: GVREGDKLPHRCWASCLDEGIQS*QKVRKM
Trigger: CATCTTCCTGACCTTCTGGCAGCTCTGGATGCCTTC...ATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp GAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTACGTGTTTCCTCCTGTaGCTGGGTATTGACAGAAGC +
Preference number: 4 (lower is better)
Translates to: ELELGRVISCHIDAGHHATCFLL*LGIDRS
Trigger: GCTTCTGTCAATACCCAGGCACAGGAGGAAACACGT...AGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp AGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTCTGACGTGTTTCCTCCTGTaGCTGGGTATTGACAGAAGC +
Preference number: 4 (lower is better)
Translates to: REGDKLPHRCWASCLDPLTCFLL*LGIDRS
Trigger: GCTTCTGTCAATACCCAGGCACAGGAGGAAACACGT...CAGAGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp TCTGTGCATATGGGGGTGAGGCATGTGCACATCAGTGGGCGCACTTACAGAGACCGGCTGTTCTTTATGTaGTTGAGAGCAATGGCACAA +
Preference number: 4 (lower is better)
Translates to: SVHMGVRHVHISGRTYRDRLFFM*LRAMAQ
Trigger: TTGTGCCATTGCTCTCAAGCACATAAAGAACAGCCG...GTCTCTGTAAGTGCGCCCACTGATGTGCACATGCCTCACCCCCATATGCACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR GCA 90 bp CAAGTACTCGTGACTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGAAGCCAGCTCCCTTCTaGAGTCTGTATTCTGCACGG +
Preference number: 4 (lower is better)
Translates to: QVLVTAEPSLWYLCLFPEKPAPF*SLYSAR
Trigger: CCGTGCAGAATACAGACTGCAGAAGGGAGCTGGCTT...CTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAGTCACGAGTACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
CDS-3UTR GCA 90 bp GTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTAAGCCAGCTCCCTTCTaGAGTCTGTATTCTGCACGG +
Preference number: 4 (lower is better)
Translates to: VREGDKLPHRCWASCLDPKPAPF*SLYSAR
Trigger: CCGTGCAGAATACAGACTGCAGAAGGGAGCTGGCTT...AGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
CDS-3UTR GCA 90 bp ATGGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATAAGCCAGCTCCCTTCTaGAGTCTGTATTCTGCACGG +
Preference number: 4 (lower is better)
Translates to: MELELGRVISCHIDAGHHKPAPF*SLYSAR
Trigger: CCGTGCAGAATACAGACTGCAGAAGGGAGCTGGCTT...ATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
CDS-3UTR GCA 90 bp GGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCAGGGATGCAGGCTTTaGTCTCTCTCCGAAGACTGT +
Preference number: 4 (lower is better)
Translates to: GVREGDKLPHRCWASCLDQGCRL*SLSEDC
Trigger: ACAGTCTTCGGAGAGAGAGCAAAGCCTGCATCCCTG...ATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp CACTTAGCCATCTCTCCACTTCGTACATGTAGTTCTTGGATGTGGAACCTGGATGTCTGGATGTGGTGCTaGGGTCTCTGCAGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: HLAISPLRTCSSWMWNLDVWMWC*GLCRSK
Trigger: CTTGCTCCTGCAGAGACCCCAGCACCACATCCAGAC...ATCCAGGTTCCACATCCAAGAACTACATGTACGAAGTGGAGAGATGGCTAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR CCA 90 bp GTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTAGAAGGTCAGGAAGATaGCTTGCCCGACGAACTGAC +
Preference number: 4 (lower is better)
Translates to: VREGDKLPHRCWASCLDPRRSGR*LARRTD
Trigger: GTCAGTTCGTCGGGCAAGCCATCTTCCTGACCTTCT...AGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp ATGGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATAGAAGGTCAGGAAGATaGCTTGCCCGACGAACTGAC +
Preference number: 4 (lower is better)
Translates to: MELELGRVISCHIDAGHHRRSGR*LARRTD
Trigger: GTCAGTTCGTCGGGCAAGCCATCTTCCTGACCTTCT...ATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp AACCACTTAGCCATCTCTCCACTTCGTACATGTAGTTCTTGGATGTGGAACCTGCAGAAGAGGTCCAGGTaGAAGCCAGCTCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: NHLAISPLRTCSSWMWNLQKRSR*KPAPFC
Trigger: GCAGAAGGGAGCTGGCTTCCACCTGGACCTCTTCTG...CAGGTTCCACATCCAAGAACTACATGTACGAAGTGGAGAGATGGCTAAGTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR CCA 90 bp AGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTCGAAGACTGTCTATGTaGGCCAAGGAGATGACAGTG +
Preference number: 4 (lower is better)
Translates to: RCWASCLDPLGIRAASTRRRLSM*AKEMTV
Trigger: CACTGTCATCTCCTTGGCCCACATAGACAGTCTTCG...ACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp CCACATAGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTCGAAGACTGTCTATGTaGGCCAAGGAGATGACAGTG +
Preference number: 4 (lower is better)
Translates to: PHRCWASCLDPLGIRAASRRLSM*AKEMTV
Trigger: CACTGTCATCTCCTTGGCCCACATAGACAGTCTTCG...ACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCTATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp AGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTCAGGAGCAGCATGTCTaGCTGATGTTTCCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: RCWASCLDPLGIRAASTRQEQHV*LMFPWH
Trigger: ATGCCAAGGAAACATCAGCCAGACATGCTGCTCCTG...ACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp GAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTCAGGAGCAGCATGTCTaGCTGATGTTTCCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: ELELGRVISCHIDAGHHAQEQHV*LMFPWH
Trigger: ATGCCAAGGAAACATCAGCCAGACATGCTGCTCCTG...AGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp TGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACTGCCATCCAGGAAATCACTaGTGTACCAACATGCCTTCC +
Preference number: 4 (lower is better)
Translates to: WASCLDPLGIRAASTRDCHPGNH*CTNMPS
Trigger: GGAAGGCATGTTGGTACACCAGTGATTTCCTGGATG...GCAGTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp TTTATTGTGGTTAGTTCTGTGCATATGGGGGTGAGGCATGTGCACATCAGTGGGACAGCTGAGAAACACTaGGGGTGTAGGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: FIVVSSVHMGVRHVHISGTAEKH*GCRASR
Trigger: CCTGGATGCCCTACACCCCCAGTGTTTCTCAGCTGT...CCCACTGATGTGCACATGCCTCACCCCCATATGCACAGAACTAACCACAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR TCA 90 bp ATGGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATCACGAGAAGCCTTTCTaGAAGCATTGGACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: MELELGRVISCHIDAGHHHEKPF*KHWTLC
Trigger: GCAGAGAGTCCAATGCTTTCAGAAAGGCTTCTCGTG...ATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp GGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCACGAGAAGCCTTTCTaGAAGCATTGGACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: GVREGDKLPHRCWASCLDHEKPF*KHWTLC
Trigger: GCAGAGAGTCCAATGCTTTCAGAAAGGCTTCTCGTG...ATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp CCACATAGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTTGTCCTCTGTGTCTTTaGGCTTTGCACTCGTCCATT +
Preference number: 4 (lower is better)
Translates to: PHRCWASCLDPLGIRAASCPLCL*ALHSSI
Trigger: AATGGACGAGTGCAAAGCTCAAAGACACAGAGGACA...ACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCTATGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp AGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTCTGTGTCCTCTGTGTCTTTaGGCTTTGCACTCGTCCATT +
Preference number: 4 (lower is better)
Translates to: REGDKLPHRCWASCLDPLCPLCL*ALHSSI
Trigger: AATGGACGAGTGCAAAGCTCAAAGACACAGAGGACA...CAGAGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp CTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGGTCTCCACACTGTTCTGGAGCCTTGGGCTaGTACATCAGTTCTGAATCT +
Preference number: 4 (lower is better)
Translates to: LLNHLSGTCVCFLRSPHCSGALG*YISSES
Trigger: AGATTCAGAACTGATGTATCAGCCCAAGGCTCCAGA...ACAGTGTGGAGACCTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp CCACATAGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTTCTGGAGCCTTGGGCTaGTACATCAGTTCTGAATCT +
Preference number: 4 (lower is better)
Translates to: PHRCWASCLDPLGIRAASSGALG*YISSES
Trigger: AGATTCAGAACTGATGTATCAGCCCAAGGCTCCAGA...ACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCTATGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp CTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGGTCTCCACACTGTGGAGGCAGAAAAATCTaGTGGGCAAGATCATCTCTG +
Preference number: 4 (lower is better)
Translates to: LLNHLSGTCVCFLRSPHCGGRKI*WARSSL
Trigger: CAGAGATGATCTTGCCCAGCAGATTTTTCTGCCTCC...ACAGTGTGGAGACCTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp AACCACTTAGCCATCTCTCCACTTCGTACATGTAGTTCTTGGATGTGGAACCTGAGAGCTGTCACCTCCTaGAGGAAGGCATCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: NHLAISPLRTCSSWMWNLRAVTS*RKASRA
Trigger: AGCTCTGGATGCCTTCCTGCAGGAGGTGACAGCTCT...CAGGTTCCACATCCAAGAACTACATGTACGAAGTGGAGAGATGGCTAAGTGGTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR GCA 90 bp CAAGTACTCGTGACTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGACACTGCCTGTCCTTTaGAATTCTGGGATGGGTGTG +
Preference number: 4 (lower is better)
Translates to: QVLVTAEPSLWYLCLFPETLPVL*NSGMGV
Trigger: CACACCCATCCCAGAATTGCAAAGGACAGGCAGTGT...CTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAGTCACGAGTACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235181.2
CDS-3UTR GCA 90 bp ATGGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATACGTGTTTCCTCCTGTaGCTGGGTATTGACAGAAGC +
Preference number: 4 (lower is better)
Translates to: MELELGRVISCHIDAGHHTCFLL*LGIDRS
Trigger: GCTTCTGTCAATACCCAGGCACAGGAGGAAACACGT...ATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp GTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTACGTGTTTCCTCCTGTaGCTGGGTATTGACAGAAGC +
Preference number: 4 (lower is better)
Translates to: VREGDKLPHRCWASCLDPTCFLL*LGIDRS
Trigger: GCTTCTGTCAATACCCAGGCACAGGAGGAAACACGT...AGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp CAAGTACTCGTGACTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGTGGGAAGACAATGGCTaGAGGGGTAGACTTGACTAC +
Preference number: 4 (lower is better)
Translates to: QVLVTAEPSLWYLCLFPEWEDNG*RGRLDY
Trigger: GTAGTCAAGTCTACCCCTGCAGCCATTGTCTTCCCA...CTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAGTCACGAGTACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp CACTTAGCCATCTCTCCACTTCGTACATGTAGTTCTTGGATGTGGAACCTGGATAGACTTCGAAGCTTCTaGAGGCTGGGGAGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: HLAISPLRTCSSWMWNLDRLRSF*RLGSSR
Trigger: CCTGGAACTCCCCAGCCTCCAGAAGCTTCGAAGTCT...ATCCAGGTTCCACATCCAAGAACTACATGTACGAAGTGGAGAGATGGCTAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR CCA 90 bp CACTTAGCCATCTCTCCACTTCGTACATGTAGTTCTTGGATGTGGAACCTGGATGAGATGGTAGGTATTTaGGTGGGGGAATCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: HLAISPLRTCSSWMWNLDEMVGI*VGESGL
Trigger: CAGCCCGGATTCCCCCACCCAAATACCTACCATCTC...ATCCAGGTTCCACATCCAAGAACTACATGTACGAAGTGGAGAGATGGCTAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR CCA 90 bp GTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTCGAAGACTGTCTATGTaGGCCAAGGAGATGACAGTG +
Preference number: 4 (lower is better)
Translates to: VREGDKLPHRCWASCLDPRRLSM*AKEMTV
Trigger: CACTGTCATCTCCTTGGCCCACATAGACAGTCTTCG...AGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp CATGTGCACATCAGTGGGCGCACTTACAGAGACCAGAGATGGCAGATCTCCCTGAGAGATGTTGATTTCTaGAGCCTTGGGCTGATACAT +
Preference number: 4 (lower is better)
Translates to: HVHISGRTYRDQRWQISLRDVDF*SLGLIH
Trigger: ATGTATCAGCCCAAGGCTCCAGAAATCAACATCTCT...CAGGGAGATCTGCCATCTCTGGTCTCTGTAAGTGCGCCCACTGATGTGCACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR CCA 90 bp CCACATAGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTCATCCAGGAAATCACTaGTGTACCAACATGCCTTCC +
Preference number: 4 (lower is better)
Translates to: PHRCWASCLDPLGIRAASHPGNH*CTNMPS
Trigger: GGAAGGCATGTTGGTACACCAGTGATTTCCTGGATG...ACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCTATGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp GGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATTGTCCTCTGTGTCTTTaGGCTTTGCACTCGTCCATT +
Preference number: 4 (lower is better)
Translates to: GVREGDKLPHRCWASCLDCPLCL*ALHSSI
Trigger: AATGGACGAGTGCAAAGCTCAAAGACACAGAGGACA...ATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp ATGGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATTGTCCTCTGTGTCTTTaGGCTTTGCACTCGTCCATT +
Preference number: 4 (lower is better)
Translates to: MELELGRVISCHIDAGHHCPLCL*ALHSSI
Trigger: AATGGACGAGTGCAAAGCTCAAAGACACAGAGGACA...ATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp GCATGTGCACATCAGTGGGCGCACTTACAGAGACCAGAGATGGCAGATCTCCCTCTGATACATCAGTTCTaGATCTTCACTGTCATTTCC +
Preference number: 4 (lower is better)
Translates to: ACAHQWAHLQRPEMADLPLIHQF*IFTVIS
Trigger: GGAAATGACAGTGAAGATTCAGAACTGATGTATCAG...AGGGAGATCTGCCATCTCTGGTCTCTGTAAGTGCGCCCACTGATGTGCACATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR TCA 90 bp ATGGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATTCTGGAGCCTTGGGCTaGTACATCAGTTCTGAATCT +
Preference number: 4 (lower is better)
Translates to: MELELGRVISCHIDAGHHSGALG*YISSES
Trigger: AGATTCAGAACTGATGTATCAGCCCAAGGCTCCAGA...ATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp ATGGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGGAGGCAGAAAAATCTaGTGGGCAAGATCATCTCTG +
Preference number: 4 (lower is better)
Translates to: MELELGRVISCHIDAGHHGGRKI*WARSSL
Trigger: CAGAGATGATCTTGCCCAGCAGATTTTTCTGCCTCC...ATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp GAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTACAGCTGAGAAACACTaGCTGTCCTTTGCAATTCTG +
Preference number: 4 (lower is better)
Translates to: ELELGRVISCHIDAGHHATAEKH*LSFAIL
Trigger: CAGAATTGCAAAGGACAGGCAGTGTTTCTCAGCTGT...AGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235181.2
CDS-3UTR GCA 90 bp TATTTTGCCCAGATGTATTTAAGGGTACTTTGTGCATGCCTGGTGCTCAAGAAAGACCTCCTTGCCGGATaGACTCAGGTGGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: YFAQMYLRVLCACLVLKKDLLAG*TQVEAG
Trigger: TCCTGCCTCCACCTGAGTGCATCCGGCAAGGAGGTC...TTTCTTGAGCACCAGGCATGCACAAAGTACCCTTAAATACATCTGGGCAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp AGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTCGGCTGTTCTTTATGTaGTTGAGAGCAATGGCACAA +
Preference number: 4 (lower is better)
Translates to: RCWASCLDPLGIRAASTRRLFFM*LRAMAQ
Trigger: TTGTGCCATTGCTCTCAAGCACATAAAGAACAGCCG...ACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp AGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTCTGCGGCTGTTCTTTATGTaGTTGAGAGCAATGGCACAA +
Preference number: 4 (lower is better)
Translates to: REGDKLPHRCWASCLDPLRLFFM*LRAMAQ
Trigger: TTGTGCCATTGCTCTCAAGCACATAAAGAACAGCCG...CAGAGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp GGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCAGAGATGTTGATTTCTaGAGCCTTGGGCTGATACAT +
Preference number: 4 (lower is better)
Translates to: GTGVREGDKLPHRCWASCRDVDF*SLGLIH
Trigger: ATGTATCAGCCCAAGGCTCCAGAAATCAACATCTCT...GCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp GGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCATCCAGGAAATCACTaGTGTACCAACATGCCTTCC +
Preference number: 4 (lower is better)
Translates to: GVREGDKLPHRCWASCLDHPGNH*CTNMPS
Trigger: GGAAGGCATGTTGGTACACCAGTGATTTCCTGGATG...ATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp CACTTAGCCATCTCTCCACTTCGTACATGTAGTTCTTGGATGTGGAACCTGGATACTGTCCGGTTCCTCTaGGTGAGCATTTTCATGAGC +
Preference number: 4 (lower is better)
Translates to: HLAISPLRTCSSWMWNLDTVRFL*VSIFMS
Trigger: GCTCATGAAAATGCTCACTCAGAGGAACCGGACAGT...ATCCAGGTTCCACATCCAAGAACTACATGTACGAAGTGGAGAGATGGCTAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR TCA 90 bp TGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACCTGATACATCAGTTCTaGATCTTCACTGTCATTTCC +
Preference number: 4 (lower is better)
Translates to: CWASCLDPLGIRAASTRDLIHQF*IFTVIS
Trigger: GGAAATGACAGTGAAGATTCAGAACTGATGTATCAG...GTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp AGATTTATTTTTATTGTGGTTAGTTCTGTGCATATGGGGGTGAGGCATGTGCACTTCCGGCGCACGTCCTaGATAAGACCCCCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: RFIFIVVSSVHMGVRHVHFRRTS*IRPPKS
Trigger: GCTCTTTGGGGGTCTTATTCAGGACGTGCGCCGGAA...GTGCACATGCCTCACCCCCATATGCACAGAACTAACCACAATAAAAATAAATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR GCA 90 bp TATTTTGCCCAGATGTATTTAAGGGTACTTTGTGCATGCCTGGTGCTCAAGAAACAGTGCCAGGCAAAATaGGGTCACCCAGATGCCGAC +
Preference number: 4 (lower is better)
Translates to: YFAQMYLRVLCACLVLKKQCQAK*GHPDAD
Trigger: GTCGGCATCTGGGTGACCGCATTTTGCCTGGCACTG...TTTCTTGAGCACCAGGCATGCACAAAGTACCCTTAAATACATCTGGGCAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp CAAGTACTCGTGACTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGCGGCTGTTCTTTATGTaGTTGAGAGCAATGGCACAA +
Preference number: 4 (lower is better)
Translates to: QVLVTAEPSLWYLCLFPERLFFM*LRAMAQ
Trigger: TTGTGCCATTGCTCTCAAGCACATAAAGAACAGCCG...CTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAGTCACGAGTACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp TATTTTGCCCAGATGTATTTAAGGGTACTTTGTGCATGCCTGGTGCTCAAGAAAGTCTGGATGTGGTGCTaGGGTCTCTGCAGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: YFAQMYLRVLCACLVLKKVWMWC*GLCRSK
Trigger: CTTGCTCCTGCAGAGACCCCAGCACCACATCCAGAC...TTTCTTGAGCACCAGGCATGCACAAAGTACCCTTAAATACATCTGGGCAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp TATTTTGCCCAGATGTATTTAAGGGTACTTTGTGCATGCCTGGTGCTCAAGAAACAGAAGAGGTCCAGGTaGAAGCCAGCTCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: YFAQMYLRVLCACLVLKKQKRSR*KPAPFC
Trigger: GCAGAAGGGAGCTGGCTTCCACCTGGACCTCTTCTG...TTTCTTGAGCACCAGGCATGCACAAAGTACCCTTAAATACATCTGGGCAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
CDS-3UTR CCA 90 bp AGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTCTGAGAGATGTTGATTTCTaGAGCCTTGGGCTGATACAT +
Preference number: 4 (lower is better)
Translates to: REGDKLPHRCWASCLDPLRDVDF*SLGLIH
Trigger: ATGTATCAGCCCAAGGCTCCAGAAATCAACATCTCT...CAGAGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp TATTTTGCCCAGATGTATTTAAGGGTACTTTGTGCATGCCTGGTGCTCAAGAAATGCAGGAGCAAGGCCTaGAGCTGTCCTCTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: YFAQMYLRVLCACLVLKKCRSKA*SCPLSS
Trigger: AGAACTGAGAGGACAGCTTCAGGCCTTGCTCCTGCA...TTTCTTGAGCACCAGGCATGCACAAAGTACCCTTAAATACATCTGGGCAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp CACTTAGCCATCTCTCCACTTCGTACATGTAGTTCTTGGATGTGGAACCTGGATTGTCCTCTGTGTCTTTaGGCTTTGCACTCGTCCATT +
Preference number: 4 (lower is better)
Translates to: HLAISPLRTCSSWMWNLDCPLCL*ALHSSI
Trigger: AATGGACGAGTGCAAAGCTCAAAGACACAGAGGACA...ATCCAGGTTCCACATCCAAGAACTACATGTACGAAGTGGAGAGATGGCTAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR TCA 90 bp TATTTTGCCCAGATGTATTTAAGGGTACTTTGTGCATGCCTGGTGCTCAAGAAACCAGGCCCAGTAACATaGGTGGGAAGACAATGGCTG +
Preference number: 4 (lower is better)
Translates to: YFAQMYLRVLCACLVLKKPGPVT*VGRQWL
Trigger: CAGCCATTGTCTTCCCACTCATGTTACTGGGCCTGG...TTTCTTGAGCACCAGGCATGCACAAAGTACCCTTAAATACATCTGGGCAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp GAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTCTGATACATCAGTTCTaGATCTTCACTGTCATTTCC +
Preference number: 4 (lower is better)
Translates to: ELELGRVISCHIDAGHHALIHQF*IFTVIS
Trigger: GGAAATGACAGTGAAGATTCAGAACTGATGTATCAG...AGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp AACCACTTAGCCATCTCTCCACTTCGTACATGTAGTTCTTGGATGTGGAACCTGTCTGGAGCCTTGGGCTaGTACATCAGTTCTGAATCT +
Preference number: 4 (lower is better)
Translates to: NHLAISPLRTCSSWMWNLSGALG*YISSES
Trigger: AGATTCAGAACTGATGTATCAGCCCAAGGCTCCAGA...CAGGTTCCACATCCAAGAACTACATGTACGAAGTGGAGAGATGGCTAAGTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR GCA 90 bp TATTTTGCCCAGATGTATTTAAGGGTACTTTGTGCATGCCTGGTGCTCAAGAAACCATGTACAGGAAGATaGCGTAGAGCACGGGCATCG +
Preference number: 4 (lower is better)
Translates to: YFAQMYLRVLCACLVLKKPCTGR*RRARAS
Trigger: CGATGCCCGTGCTCTACGGCATCTTCCTGTACATGG...TTTCTTGAGCACCAGGCATGCACAAAGTACCCTTAAATACATCTGGGCAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp ATGGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATAGAGATGTTGATTTCTaGAGCCTTGGGCTGATACAT +
Preference number: 4 (lower is better)
Translates to: MELELGRVISCHIDAGHHRDVDF*SLGLIH
Trigger: ATGTATCAGCCCAAGGCTCCAGAAATCAACATCTCT...ATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp ATGGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATCTGATACATCAGTTCTaGATCTTCACTGTCATTTCC +
Preference number: 4 (lower is better)
Translates to: MELELGRVISCHIDAGHHLIHQF*IFTVIS
Trigger: GGAAATGACAGTGAAGATTCAGAACTGATGTATCAG...ATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp GGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCTGATACATCAGTTCTaGATCTTCACTGTCATTTCC +
Preference number: 4 (lower is better)
Translates to: GVREGDKLPHRCWASCLDLIHQF*IFTVIS
Trigger: GGAAATGACAGTGAAGATTCAGAACTGATGTATCAG...ATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR TCA 90 bp TATTTTGCCCAGATGTATTTAAGGGTACTTTGTGCATGCCTGGTGCTCAAGAAAACTGTCCGGTTCCTCTaGGTGAGCATTTTCATGAGC +
Preference number: 4 (lower is better)
Translates to: YFAQMYLRVLCACLVLKKTVRFL*VSIFMS
Trigger: GCTCATGAAAATGCTCACTCAGAGGAACCGGACAGT...TTTCTTGAGCACCAGGCATGCACAAAGTACCCTTAAATACATCTGGGCAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
CDS-3UTR TCA 90 bp TTTATTTTTATTGTGGTTAGTTCTGTGCATATGGGGGTGAGGCATGTGCACATCCACGAGAAGCCTTTCTaGAAGCATTGGACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: FIFIVVSSVHMGVRHVHIHEKPF*KHWTLC
Trigger: GCAGAGAGTCCAATGCTTTCAGAAAGGCTTCTCGTG...GATGTGCACATGCCTCACCCCCATATGCACAGAACTAACCACAATAAAAATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR GCA 90 bp AGATTTATTTTTATTGTGGTTAGTTCTGTGCATATGGGGGTGAGGCATGTGCACACGTGTTTCCTCCTGTaGCTGGGTATTGACAGAAGC +
Preference number: 4 (lower is better)
Translates to: RFIFIVVSSVHMGVRHVHTCFLL*LGIDRS
Trigger: GCTTCTGTCAATACCCAGGCACAGGAGGAAACACGT...GTGCACATGCCTCACCCCCATATGCACAGAACTAACCACAATAAAAATAAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR GCA 90 bp TATTTTGCCCAGATGTATTTAAGGGTACTTTGTGCATGCCTGGTGCTCAAGAAATGGGAAGACAATGGCTaGAGGGGTAGACTTGACTAC +
Preference number: 4 (lower is better)
Translates to: YFAQMYLRVLCACLVLKKWEDNG*RGRLDY
Trigger: GTAGTCAAGTCTACCCCTGCAGCCATTGTCTTCCCA...TTTCTTGAGCACCAGGCATGCACAAAGTACCCTTAAATACATCTGGGCAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp TATTTTGCCCAGATGTATTTAAGGGTACTTTGTGCATGCCTGGTGCTCAAGAAACGAAGACTGTCTATGTaGGCCAAGGAGATGACAGTG +
Preference number: 4 (lower is better)
Translates to: YFAQMYLRVLCACLVLKKRRLSM*AKEMTV
Trigger: CACTGTCATCTCCTTGGCCCACATAGACAGTCTTCG...TTTCTTGAGCACCAGGCATGCACAAAGTACCCTTAAATACATCTGGGCAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp TATTTTGCCCAGATGTATTTAAGGGTACTTTGTGCATGCCTGGTGCTCAAGAAACAGGAGCAGCATGTCTaGCTGATGTTTCCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: YFAQMYLRVLCACLVLKKQEQHV*LMFPWH
Trigger: ATGCCAAGGAAACATCAGCCAGACATGCTGCTCCTG...TTTCTTGAGCACCAGGCATGCACAAAGTACCCTTAAATACATCTGGGCAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237595.2
CDS-3UTR GCA 90 bp TATTTTGCCCAGATGTATTTAAGGGTACTTTGTGCATGCCTGGTGCTCAAGAAACGGCTGTTCTTTATGTaGTTGAGAGCAATGGCACAA +
Preference number: 4 (lower is better)
Translates to: YFAQMYLRVLCACLVLKKRLFFM*LRAMAQ
Trigger: TTGTGCCATTGCTCTCAAGCACATAAAGAACAGCCG...TTTCTTGAGCACCAGGCATGCACAAAGTACCCTTAAATACATCTGGGCAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237595.2
CDS-3UTR CCA 90 bp TATTTTGCCCAGATGTATTTAAGGGTACTTTGTGCATGCCTGGTGCTCAAGAAAAGAGATGTTGATTTCTaGAGCCTTGGGCTGATACAT +
Preference number: 4 (lower is better)
Translates to: YFAQMYLRVLCACLVLKKRDVDF*SLGLIH
Trigger: ATGTATCAGCCCAAGGCTCCAGAAATCAACATCTCT...TTTCTTGAGCACCAGGCATGCACAAAGTACCCTTAAATACATCTGGGCAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237595.2
CDS GCA 90 bp CGGGCTGTCCGGTCCCACCGGCCCGGGGGTAGAGCTGTCACCTCCTaGAGGAAGGCATCCAGAGCTGCCAGAAGGTCAGGAAGATGGCTT +
Preference number: 5 (lower is better)
Translates to: RAVRSHRPGGRAVTS*RKASRAARRSGRWL
Trigger: AAGCCATCTTCCTGACCTTCTGGCAGCTCTGGATGCCTTCCTGCAGGAGGTGACAGCTCTACCCCCGGGCCGGTGGGACCGGACAGCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000236779.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS GCA 90 bp ACCGGCCCGCGCCCATGTCTAGCTTTTCCTCGAACAGCAGCCACCTaGCTGTCTCTCGCCACTCTAGTGCCTGGGGCCAACCCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: TGPRPCLAFPRTAAT*LSLATLVPGANPAA
Trigger: AGCTGCTGGGTTGGCCCCAGGCACTAGAGTGGCGAGAGACAGGCAGGTGGCTGCTGTTCGAGGAAAAGCTAGACATGGGCGCGGGCCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000236779.2
ENSMUST00000237174.2
CDS CCA 90 bp GTGTGGCTAGGCCCAGGAAGGTGTCAAGGCCACAGCCCAGCAGGATaGCCAGGACTGAGGAAAAGTCGCCCAACACCTTGCGCACCACAG +
Preference number: 5 (lower is better)
Translates to: VWLGPGRCQGHSPAG*PGLRKSRPTPCAPQ
Trigger: CTGTGGTGCGCAAGGTGTTGGGCGACTTTTCCTCAGTCCTGGCCATCCTGCTGGGCTGTGGCCTTGACACCTTCCTGGGCCTAGCCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000236779.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS TCA 90 bp GCCCAGGAAGGTGTCAAGGCCACAGCCCAGCAGGATGGCCAGGACTaGGGAAAAGTCGCCCAACACCTTGCGCACCACAGAGGGGAAGAA +
Preference number: 5 (lower is better)
Translates to: AQEGVKATAQQDGQD*GKVAQHLAHHRGEE
Trigger: TTCTTCCCCTCTGTGGTGCGCAAGGTGTTGGGCGACTTTTCCTCAGTCCTGGCCATCCTGCTGGGCTGTGGCCTTGACACCTTCCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000236779.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS CCA 90 bp CAGTCTAGCAGGACAATGCCCTCGGCCAACAGACTTCGAAGCTTCTaGAGGCTGGGGAGTTCCAGGGTAGGCACATGGGGAGCACTCCAC +
Preference number: 5 (lower is better)
Translates to: QSSRTMPSANRLRSF*RLGSSRVGTWGALH
Trigger: GTGGAGTGCTCCCCATGTGCCTACCCTGGAACTCCCCAGCCTCCAGAAGCTTCGAAGTCTGTTGGCCGAGGGCATTGTCCTGCTAGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000236779.2
ENSMUST00000237174.2
CDS GCA 90 bp CCACAAGCTCCAGGAGGCTCTGAGCCTGACAGTCTAGCAGGACAATaGCCTCGGCCAACAGACTTCGAAGCTTCTGGAGGCTGGGGAGTT +
Preference number: 5 (lower is better)
Translates to: PQAPGGSEPDSLAGQ*PRPTDFEASGGWGV
Trigger: AACTCCCCAGCCTCCAGAAGCTTCGAAGTCTGTTGGCCGAGGGCATTGTCCTGCTAGACTGTCAGGCTCAGAGCCTCCTGGAGCTTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000236779.2
ENSMUST00000237174.2
CDS CCA 90 bp GGACAGCAGCTGCCCGTCCCATCTCATGGTAGCTCCTTCCCAGGGTaGGAGGACCCAAGAGGAGGCAGAAAAATCTGCTGGGCAAGATCA +
Preference number: 5 (lower is better)
Translates to: GQQLPVPSHGSSFPG*EDPRGGRKICWARS
Trigger: TGATCTTGCCCAGCAGATTTTTCTGCCTCCTCTTGGGTCCTCCCACCCTGGGAAGGAGCTACCATGAGATGGGACGGGCAGCTGCTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000236779.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS CCA 90 bp ACCTCCTGCAGGAAGGCATCCAGAGCTGCCAGAAGGTCAGGAAGATaGCTTGCCCGACGAACTGACCACTGGAATTGCGGGTCACTGAGG +
Preference number: 5 (lower is better)
Translates to: TSCRKASRAARRSGR*LARRTDHWNCGSLR
Trigger: CCTCAGTGACCCGCAATTCCAGTGGTCAGTTCGTCGGGCAAGCCATCTTCCTGACCTTCTGGCAGCTCTGGATGCCTTCCTGCAGGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000236779.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp GCATGTGCACATCAGTGGGCGCACTTACAGAGACCAGAGATGGCAGATCTCCCTGAGAGGGTGACCTCCTaGCCGGATGCACTCAGGTGG +
Preference number: 5 (lower is better)
Translates to: ACAHQWAHLQRPEMADLPERVTS*PDALRW
Trigger: CCACCTGAGTGCATCCGGCAAGGAGGTCACCCTCTC...AGGGAGATCTGCCATCTCTGGTCTCTGTAAGTGCGCCCACTGATGTGCACATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR CAA 90 bp TGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACTGCGAGAGGGTGACCTCCTaGCCGGATGCACTCAGGTGG +
Preference number: 5 (lower is better)
Translates to: WASCLDPLGIRAASTRDCERVTS*PDALRW
Trigger: CCACCTGAGTGCATCCGGCAAGGAGGTCACCCTCTC...GCAGTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS CCA 90 bp TCTCCAGGGATGCAGGCTTTGCTCTCTCTCCGAAGACTGTCTATGTaGGCCAAGGAGATGACAGTGGCTGAGACGTACCATGGCAGCCCA +
Preference number: 5 (lower is better)
Translates to: SPGMQALLSLRRLSM*AKEMTVAETYHGSP
Trigger: TGGGCTGCCATGGTACGTCTCAGCCACTGTCATCTCCTTGGCCCACATAGACAGTCTTCGGAGAGAGAGCAAAGCCTGCATCCCTGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236779.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp TTTGTGCATGCCTGGTGCTCAAGAAAGCTAGCAGAGGGCGCTGGATCCCATGGAGGTCAGGAAGATGGCTaGCCCGACGAACTGACCACT +
Preference number: 5 (lower is better)
Translates to: FVHAWCSRKLAEGAGSHGGQEDG*PDELTT
Trigger: AGTGGTCAGTTCGTCGGGCAAGCCATCTTCCTGACC...TCCATGGGATCCAGCGCCCTCTGCTAGCTTTCTTGAGCACCAGGCATGCACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp CTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGGTCTCCACACTGTGAGAGGGTGACCTCCTaGCCGGATGCACTCAGGTGG +
Preference number: 5 (lower is better)
Translates to: LLNHLSGTCVCFLRSPHCERVTS*PDALRW
Trigger: CCACCTGAGTGCATCCGGCAAGGAGGTCACCCTCTC...ACAGTGTGGAGACCTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp GAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTGAGAGGGTGACCTCCTaGCCGGATGCACTCAGGTGG +
Preference number: 5 (lower is better)
Translates to: ELELGRVISCHIDAGHHAERVTS*PDALRW
Trigger: CCACCTGAGTGCATCCGGCAAGGAGGTCACCCTCTC...AGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp GCATGTGCACATCAGTGGGCGCACTTACAGAGACCAGAGATGGCAGATCTCCCTCCAGGGATGCAGGCTTaGCTCTCTCTCCGAAGACTG +
Preference number: 5 (lower is better)
Translates to: ACAHQWAHLQRPEMADLPPGMQA*LSLRRL
Trigger: CAGTCTTCGGAGAGAGAGCAAAGCCTGCATCCCTGG...AGGGAGATCTGCCATCTCTGGTCTCTGTAAGTGCGCCCACTGATGTGCACATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR CAA 90 bp TTTGTGCATGCCTGGTGCTCAAGAAAGCTAGCAGAGGGCGCTGGATCCCATGGAGGCATCGGGATGAACTaGAGCACAGGTGCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: FVHAWCSRKLAEGAGSHGGIGMN*STGARK
Trigger: CTTCCTGGCACCTGTGCTCAAGTTCATCCCGATGCC...TCCATGGGATCCAGCGCCCTCTGCTAGCTTTCTTGAGCACCAGGCATGCACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237595.2
CDS CCA 90 bp AGCTCCAGCGGGCAGCTTCTGTCTCAAAGGGTTCTGGTGCTTCAGTaGGGCGTCCTCATCACGAGAAGCCTTTCTGAAAGCATTGGACTC +
Preference number: 5 (lower is better)
Translates to: SSSGQLLSQRVLVLQ*GVLITRSLSESIGL
Trigger: GAGTCCAATGCTTTCAGAAAGGCTTCTCGTGATGAGGACGCCCCACTGAAGCACCAGAACCCTTTGAGACAGAAGCTGCCCGCTGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000236779.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp CATGTGCACATCAGTGGGCGCACTTACAGAGACCAGAGATGGCAGATCTCCCTGGCCTTTCTGAAAGCATaGGACTCTCTGCAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: HVHISGRTYRDQRWQISLAFLKA*DSLQGL
Trigger: CAGGCCCTGCAGAGAGTCCAATGCTTTCAGAAAGGC...CAGGGAGATCTGCCATCTCTGGTCTCTGTAAGTGCGCCCACTGATGTGCACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR CAA 90 bp TGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACGGTCAGGAAGATGGCTaGCCCGACGAACTGACCACT +
Preference number: 5 (lower is better)
Translates to: CWASCLDPLGIRAASTRDGQEDG*PDELTT
Trigger: AGTGGTCAGTTCGTCGGGCAAGCCATCTTCCTGACC...GTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp GGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCCCAGGGATGCAGGCTTaGCTCTCTCTCCGAAGACTG +
Preference number: 5 (lower is better)
Translates to: GTGVREGDKLPHRCWASCPGMQA*LSLRRL
Trigger: CAGTCTTCGGAGAGAGAGCAAAGCCTGCATCCCTGG...GCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp TGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACTGCCCAGGGATGCAGGCTTaGCTCTCTCTCCGAAGACTG +
Preference number: 5 (lower is better)
Translates to: WASCLDPLGIRAASTRDCPGMQA*LSLRRL
Trigger: CAGTCTTCGGAGAGAGAGCAAAGCCTGCATCCCTGG...GCAGTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp TGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACTGCGCCTTTCTGAAAGCATaGGACTCTCTGCAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: WASCLDPLGIRAASTRDCAFLKA*DSLQGL
Trigger: CAGGCCCTGCAGAGAGTCCAATGCTTTCAGAAAGGC...GCAGTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp GGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCGCCTTTCTGAAAGCATaGGACTCTCTGCAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: GTGVREGDKLPHRCWASCAFLKA*DSLQGL
Trigger: CAGGCCCTGCAGAGAGTCCAATGCTTTCAGAAAGGC...GCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp CTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGGTCTCCACACTGTGGTCAGGAAGATGGCTaGCCCGACGAACTGACCACT +
Preference number: 5 (lower is better)
Translates to: LLNHLSGTCVCFLRSPHCGQEDG*PDELTT
Trigger: AGTGGTCAGTTCGTCGGGCAAGCCATCTTCCTGACC...ACAGTGTGGAGACCTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp CATGTGCACATCAGTGGGCGCACTTACAGAGACCAGAGATGGCAGATCTCCCTGTCCTGTGCCTGGGTATaGACAGAAGCAACCATAGGC +
Preference number: 5 (lower is better)
Translates to: HVHISGRTYRDQRWQISLSCAWV*TEATIG
Trigger: GCCTATGGTTGCTTCTGTCAATACCCAGGCACAGGA...CAGGGAGATCTGCCATCTCTGGTCTCTGTAAGTGCGCCCACTGATGTGCACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR CAA 90 bp TTTGTGCATGCCTGGTGCTCAAGAAAGCTAGCAGAGGGCGCTGGATCCCATGGACCAGAGAGTGTAGGCTaGAATTCTGTGGGCACCAAG +
Preference number: 5 (lower is better)
Translates to: FVHAWCSRKLAEGAGSHGPESVG*NSVGTK
Trigger: CTTGGTGCCCACAGAATTCAAGCCTACACTCTCTGG...TCCATGGGATCCAGCGCCCTCTGCTAGCTTTCTTGAGCACCAGGCATGCACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp CATGTGCACATCAGTGGGCGCACTTACAGAGACCAGAGATGGCAGATCTCCCTGCTGTATTCTGCACGGTaGAGGATGACTGCCGTGATC +
Preference number: 5 (lower is better)
Translates to: HVHISGRTYRDQRWQISLLYSAR*RMTAVI
Trigger: GATCACGGCAGTCATCCTCAACCGTGCAGAATACAG...CAGGGAGATCTGCCATCTCTGGTCTCTGTAAGTGCGCCCACTGATGTGCACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR CAA 90 bp CCACATAGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTGGCATCGGGATGAACTaGAGCACAGGTGCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: PHRCWASCLDPLGIRAASGIGMN*STGARK
Trigger: CTTCCTGGCACCTGTGCTCAAGTTCATCCCGATGCC...ACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCTATGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp AGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGGCATCGGGATGAACTaGAGCACAGGTGCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: RCWASCLDPLGIRAASTRGIGMN*STGARK
Trigger: CTTCCTGGCACCTGTGCTCAAGTTCATCCCGATGCC...ACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp TGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACTGCGCTGCAGGGGTAGACTaGACTACCCAAAGCAGACCT +
Preference number: 5 (lower is better)
Translates to: WASCLDPLGIRAASTRDCAAGVD*TTQSRP
Trigger: AGGTCTGCTTTGGGTAGTCAAGTCTACCCCTGCAGC...GCAGTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp TGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACGCTGCAGGGGTAGACTaGACTACCCAAAGCAGACCT +
Preference number: 5 (lower is better)
Translates to: CWASCLDPLGIRAASTRDAAGVD*TTQSRP
Trigger: AGGTCTGCTTTGGGTAGTCAAGTCTACCCCTGCAGC...GTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp GAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTGCCTTTCTGAAAGCATaGGACTCTCTGCAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: ELELGRVISCHIDAGHHAAFLKA*DSLQGL
Trigger: CAGGCCCTGCAGAGAGTCCAATGCTTTCAGAAAGGC...AGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp TTTGTGCATGCCTGGTGCTCAAGAAAGCTAGCAGAGGGCGCTGGATCCCATGGAAACACTGCCTGTCCTTaGCAATTCTGGGATGGGTGT +
Preference number: 5 (lower is better)
Translates to: FVHAWCSRKLAEGAGSHGNTACP*QFWDGC
Trigger: ACACCCATCCCAGAATTGCAAAGGACAGGCAGTGTT...TCCATGGGATCCAGCGCCCTCTGCTAGCTTTCTTGAGCACCAGGCATGCACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235181.2
CDS-3UTR CAA 90 bp TTTGTGCATGCCTGGTGCTCAAGAAAGCTAGCAGAGGGCGCTGGATCCCATGGAACCCTGGCCTTTGGATaGGATAGGCACGGATCAAAT +
Preference number: 5 (lower is better)
Translates to: FVHAWCSRKLAEGAGSHGTLAFG*DRHGSN
Trigger: ATTTGATCCGTGCCTATCCAATCCAAAGGCCAGGGT...TCCATGGGATCCAGCGCCCTCTGCTAGCTTTCTTGAGCACCAGGCATGCACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp TGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACTGCTCCTGTGCCTGGGTATaGACAGAAGCAACCATAGGC +
Preference number: 5 (lower is better)
Translates to: WASCLDPLGIRAASTRDCSCAWV*TEATIG
Trigger: GCCTATGGTTGCTTCTGTCAATACCCAGGCACAGGA...GCAGTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp TGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACTGCGGCAGGAAGGAAGCATaGACTAGACCTGGCACACTT +
Preference number: 5 (lower is better)
Translates to: WASCLDPLGIRAASTRDCGRKEA*TRPGTL
Trigger: AAGTGTGCCAGGTCTAGTCAATGCTTCCTTCCTGCC...GCAGTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp TGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACGGCAGGAAGGAAGCATaGACTAGACCTGGCACACTT +
Preference number: 5 (lower is better)
Translates to: CWASCLDPLGIRAASTRDGRKEA*TRPGTL
Trigger: AAGTGTGCCAGGTCTAGTCAATGCTTCCTTCCTGCC...GTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp GGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCCCAGAGAGTGTAGGCTaGAATTCTGTGGGCACCAAG +
Preference number: 5 (lower is better)
Translates to: GTGVREGDKLPHRCWASCPESVG*NSVGTK
Trigger: CTTGGTGCCCACAGAATTCAAGCCTACACTCTCTGG...GCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp TACAGAGACCAGAGATGGCAGATCTCCCTGGAGCTACAGCCTTCCTCTGTGAGTCCAGAGAGTGTAGGCTaGAATTCTGTGGGCACCAAG +
Preference number: 5 (lower is better)
Translates to: YRDQRWQISLELQPSSVSPESVG*NSVGTK
Trigger: CTTGGTGCCCACAGAATTCAAGCCTACACTCTCTGG...ACTCACAGAGGAAGGCTGTAGCTCCAGGGAGATCTGCCATCTCTGGTCTCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR CAA 90 bp GGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCCTGTATTCTGCACGGTaGAGGATGACTGCCGTGATC +
Preference number: 5 (lower is better)
Translates to: GTGVREGDKLPHRCWASCLYSAR*RMTAVI
Trigger: GATCACGGCAGTCATCCTCAACCGTGCAGAATACAG...GCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp ATGGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATCCAGGGATGCAGGCTTaGCTCTCTCTCCGAAGACTG +
Preference number: 5 (lower is better)
Translates to: MELELGRVISCHIDAGHHPGMQA*LSLRRL
Trigger: CAGTCTTCGGAGAGAGAGCAAAGCCTGCATCCCTGG...ATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp ATGGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGGCATCGGGATGAACTaGAGCACAGGTGCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: MELELGRVISCHIDAGHHGIGMN*STGARK
Trigger: CTTCCTGGCACCTGTGCTCAAGTTCATCCCGATGCC...ATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp GAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTGCTGCAGGGGTAGACTaGACTACCCAAAGCAGACCT +
Preference number: 5 (lower is better)
Translates to: ELELGRVISCHIDAGHHAAAGVD*TTQSRP
Trigger: AGGTCTGCTTTGGGTAGTCAAGTCTACCCCTGCAGC...AGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp CTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGGTCTCCACACTGTGAGCCTGCCTGTCCTTaGCAATTCTGGGATGGGTGT +
Preference number: 5 (lower is better)
Translates to: LLNHLSGTCVCFLRSPHCEPACP*QFWDGC
Trigger: ACACCCATCCCAGAATTGCAAAGGACAGGCAGGCTC...ACAGTGTGGAGACCTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp AGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTCTGGAGCCTGCCTGTCCTTaGCAATTCTGGGATGGGTGT +
Preference number: 5 (lower is better)
Translates to: REGDKLPHRCWASCLDPLEPACP*QFWDGC
Trigger: ACACCCATCCCAGAATTGCAAAGGACAGGCAGGCTC...CAGAGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp ACCAATCTTTCAGTTCACCCCACCTGTGTCTGTTTCCTGAGGTCTCCACACTGTACCAGGCCCAGTAACTaGAGCACAGGTGCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: TNLSVHPTCVCFLRSPHCTRPSN*STGARK
Trigger: CTTCCTGGCACCTGTGCTCAAGTTACTGGGCCTGGT...ACAGTGTGGAGACCTCAGGAAACAGACACAGGTGGGGTGAACTGAAAGATTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR CAA 90 bp ATGGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCCTTTCTGAAAGCATaGGACTCTCTGCAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: MELELGRVISCHIDAGHHAFLKA*DSLQGL
Trigger: CAGGCCCTGCAGAGAGTCCAATGCTTTCAGAAAGGC...ATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp TGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACACCCTGGCCTTTGGATaGGATAGGCACGGATCAAAT +
Preference number: 5 (lower is better)
Translates to: CWASCLDPLGIRAASTRDTLAFG*DRHGSN
Trigger: ATTTGATCCGTGCCTATCCAATCCAAAGGCCAGGGT...GTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp GAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTCCTGTGCCTGGGTATaGACAGAAGCAACCATAGGC +
Preference number: 5 (lower is better)
Translates to: ELELGRVISCHIDAGHHASCAWV*TEATIG
Trigger: GCCTATGGTTGCTTCTGTCAATACCCAGGCACAGGA...AGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp CTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGGTCTCCACACTGTCTGTATTCTGCACGGTaGAGGATGACTGCCGTGATC +
Preference number: 5 (lower is better)
Translates to: LLNHLSGTCVCFLRSPHCLYSAR*RMTAVI
Trigger: GATCACGGCAGTCATCCTCAACCGTGCAGAATACAG...ACAGTGTGGAGACCTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp GTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTGCTGCAGGGGTAGACTaGACTACCCAAAGCAGACCT +
Preference number: 5 (lower is better)
Translates to: VREGDKLPHRCWASCLDPAAGVD*TTQSRP
Trigger: AGGTCTGCTTTGGGTAGTCAAGTCTACCCCTGCAGC...AGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp GGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATGCTGCAGGGGTAGACTaGACTACCCAAAGCAGACCT +
Preference number: 5 (lower is better)
Translates to: GVREGDKLPHRCWASCLDAAGVD*TTQSRP
Trigger: AGGTCTGCTTTGGGTAGTCAAGTCTACCCCTGCAGC...ATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp ACCAATCTTTCAGTTCACCCCACCTGTGTCTGTTTCCTGAGGTCTCCACACTGTGAGCCTGCCTGTCCTTaGCAATTCTGGGATGGGTGT +
Preference number: 5 (lower is better)
Translates to: TNLSVHPTCVCFLRSPHCEPACP*QFWDGC
Trigger: ACACCCATCCCAGAATTGCAAAGGACAGGCAGGCTC...ACAGTGTGGAGACCTCAGGAAACAGACACAGGTGGGGTGAACTGAAAGATTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS TCA 90 bp CCTTGGGCTGATACATCAGTTCTGAATCTTCACTGTCATTTCCACTaGACAAGTGCTCTGGCTCGGACCTGTTCTCGGGGATGGTCTCCT +
Preference number: 5 (lower is better)
Translates to: PWADTSVLNLHCHFH*TSALARTCSRGWSP
Trigger: AGGAGACCATCCCCGAGAACAGGTCCGAGCCAGAGCACTTGTTCAGTGGAAATGACAGTGAAGATTCAGAACTGATGTATCAGCCCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000236779.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS CCA 90 bp TCCTGTGCCTGGGTATTGACAGAAGCAACCATAGGCAGAAGACCCTaGCCTTTGGATTGGATAGGCACGGATCAAATTCAGCATCTTCCC +
Preference number: 5 (lower is better)
Translates to: SCAWVLTEATIGRRP*PLDWIGTDQIQHLP
Trigger: GGGAAGATGCTGAATTTGATCCGTGCCTATCCAATCCAAAGGCCAGGGTCTTCTGCCTATGGTTGCTTCTGTCAATACCCAGGCACAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000236779.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp AGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTACCCTGGCCTTTGGATaGGATAGGCACGGATCAAAT +
Preference number: 5 (lower is better)
Translates to: RCWASCLDPLGIRAASTRTLAFG*DRHGSN
Trigger: ATTTGATCCGTGCCTATCCAATCCAAAGGCCAGGGT...ACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp GAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTACCCTGGCCTTTGGATaGGATAGGCACGGATCAAAT +
Preference number: 5 (lower is better)
Translates to: ELELGRVISCHIDAGHHATLAFG*DRHGSN
Trigger: ATTTGATCCGTGCCTATCCAATCCAAAGGCCAGGGT...AGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp CAAGTACTCGTGACTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGTCCTGTGCCTGGGTATaGACAGAAGCAACCATAGGC +
Preference number: 5 (lower is better)
Translates to: QVLVTAEPSLWYLCLFPESCAWV*TEATIG
Trigger: GCCTATGGTTGCTTCTGTCAATACCCAGGCACAGGA...CTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAGTCACGAGTACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp ATGGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATTCCTGTGCCTGGGTATaGACAGAAGCAACCATAGGC +
Preference number: 5 (lower is better)
Translates to: MELELGRVISCHIDAGHHSCAWV*TEATIG
Trigger: GCCTATGGTTGCTTCTGTCAATACCCAGGCACAGGA...ATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp GGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATTCCTGTGCCTGGGTATaGACAGAAGCAACCATAGGC +
Preference number: 5 (lower is better)
Translates to: GVREGDKLPHRCWASCLDSCAWV*TEATIG
Trigger: GCCTATGGTTGCTTCTGTCAATACCCAGGCACAGGA...ATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp ATGGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGGCAGGAAGGAAGCATaGACTAGACCTGGCACACTT +
Preference number: 5 (lower is better)
Translates to: MELELGRVISCHIDAGHHGRKEA*TRPGTL
Trigger: AAGTGTGCCAGGTCTAGTCAATGCTTCCTTCCTGCC...ATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp CTGCATACCAATCTTTCAGTTCACCCCACCTGTGTCTGTTTCCTGAGGTCTCCAGGCAGGAAGGAAGCATaGACTAGACCTGGCACACTT +
Preference number: 5 (lower is better)
Translates to: LHTNLSVHPTCVCFLRSPGRKEA*TRPGTL
Trigger: AAGTGTGCCAGGTCTAGTCAATGCTTCCTTCCTGCC...TGGAGACCTCAGGAAACAGACACAGGTGGGGTGAACTGAAAGATTGGTATGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR CAA 90 bp GTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTGGCAGGAAGGAAGCATaGACTAGACCTGGCACACTT +
Preference number: 5 (lower is better)
Translates to: VREGDKLPHRCWASCLDPGRKEA*TRPGTL
Trigger: AAGTGTGCCAGGTCTAGTCAATGCTTCCTTCCTGCC...AGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp CAAGTACTCGTGACTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGGGCAGGAAGGAAGCATaGACTAGACCTGGCACACTT +
Preference number: 5 (lower is better)
Translates to: QVLVTAEPSLWYLCLFPEGRKEA*TRPGTL
Trigger: AAGTGTGCCAGGTCTAGTCAATGCTTCCTTCCTGCC...CTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAGTCACGAGTACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp TTTGTGCATGCCTGGTGCTCAAGAAAGCTAGCAGAGGGCGCTGGATCCCATGGACTGTTCTTTATGTGCTaGAGAGCAATGGCACAAAGG +
Preference number: 5 (lower is better)
Translates to: FVHAWCSRKLAEGAGSHGLFFMC*RAMAQR
Trigger: CCTTTGTGCCATTGCTCTCAAGCACATAAAGAACAG...TCCATGGGATCCAGCGCCCTCTGCTAGCTTTCTTGAGCACCAGGCATGCACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp GTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTCCAGAGAGTGTAGGCTaGAATTCTGTGGGCACCAAG +
Preference number: 5 (lower is better)
Translates to: VREGDKLPHRCWASCLDPPESVG*NSVGTK
Trigger: CTTGGTGCCCACAGAATTCAAGCCTACACTCTCTGG...AGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp CAAGTACTCGTGACTGCTGAACCATCTCTCTGGTACCTGTGTCTGTTTCCTGAGCCAGAGAGTGTAGGCTaGAATTCTGTGGGCACCAAG +
Preference number: 5 (lower is better)
Translates to: QVLVTAEPSLWYLCLFPEPESVG*NSVGTK
Trigger: CTTGGTGCCCACAGAATTCAAGCCTACACTCTCTGG...CTCAGGAAACAGACACAGGTACCAGAGAGATGGTTCAGCAGTCACGAGTACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp GGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCTGTATTCTGCACGGTaGAGGATGACTGCCGTGATC +
Preference number: 5 (lower is better)
Translates to: GVREGDKLPHRCWASCLDLYSAR*RMTAVI
Trigger: GATCACGGCAGTCATCCTCAACCGTGCAGAATACAG...ATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp GTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTCTGTATTCTGCACGGTaGAGGATGACTGCCGTGATC +
Preference number: 5 (lower is better)
Translates to: VREGDKLPHRCWASCLDPLYSAR*RMTAVI
Trigger: GATCACGGCAGTCATCCTCAACCGTGCAGAATACAG...AGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp TGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTGACCTGGCTGATGTTTCCTaGGCATCAACAATAGCTGCA +
Preference number: 5 (lower is better)
Translates to: CWASCLDPLGIRAASTRDLADVS*ASTIAA
Trigger: TGCAGCTATTGTTGATGCCAAGGAAACATCAGCCAG...GTCACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp GTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTACTCTCTTCACGAACTaGAGCACAGGTGCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: VREGDKLPHRCWASCLDPTLFTN*STGARK
Trigger: CTTCCTGGCACCTGTGCTCAAGTTCGTGAAGAGAGT...AGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237174.2
CDS-3UTR CAA 90 bp GTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTACCCTGGCCTTTGGATaGGATAGGCACGGATCAAAT +
Preference number: 5 (lower is better)
Translates to: VREGDKLPHRCWASCLDPTLAFG*DRHGSN
Trigger: ATTTGATCCGTGCCTATCCAATCCAAAGGCCAGGGT...AGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp TCCCGAGAACTGAACTCAGGCCCTCAGGAAGAGCAGCAACTGCTCTTAACCACTCTGTTCTTTATGTGCTaGAGAGCAATGGCACAAAGG +
Preference number: 5 (lower is better)
Translates to: SRELNSGPQEEQQLLLTTLFFMC*RAMAQR
Trigger: CCTTTGTGCCATTGCTCTCAAGCACATAAAGAACAG...AGTGGTTAAGAGCAGTTGCTGCTCTTCCTGAGGGCCTGAGTTCAGTTCTCGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR CAA 90 bp AGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTCTGGCTGATGTTTCCTaGGCATCAACAATAGCTGCA +
Preference number: 5 (lower is better)
Translates to: RCWASCLDPLGIRAASTRLADVS*ASTIAA
Trigger: TGCAGCTATTGTTGATGCCAAGGAAACATCAGCCAG...ACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp TTTATTGTGGTTAGTTCTGTGCATATGGGGGTGAGGCATGTGCACATCAGTGGGACCCTGGCCTTTGGATaGGATAGGCACGGATCAAAT +
Preference number: 5 (lower is better)
Translates to: FIVVSSVHMGVRHVHISGTLAFG*DRHGSN
Trigger: ATTTGATCCGTGCCTATCCAATCCAAAGGCCAGGGT...CCCACTGATGTGCACATGCCTCACCCCCATATGCACAGAACTAACCACAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS-3UTR CAA 90 bp AGATGCTGGGCATCATGCTTAGATCCTCTGGGCATCAGAGCTGCAAGTACTCGTCTGTTCTTTATGTGCTaGAGAGCAATGGCACAAAGG +
Preference number: 5 (lower is better)
Translates to: RCWASCLDPLGIRAASTRLFFMC*RAMAQR
Trigger: CCTTTGTGCCATTGCTCTCAAGCACATAAAGAACAG...ACGAGTACTTGCAGCTCTGATGCCCAGAGGATCTAAGCATGATGCCCAGCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp GTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCCTCTGGCTGATGTTTCCTaGGCATCAACAATAGCTGCA +
Preference number: 5 (lower is better)
Translates to: VREGDKLPHRCWASCLDPLADVS*ASTIAA
Trigger: TGCAGCTATTGTTGATGCCAAGGAAACATCAGCCAG...AGGATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp ATGGAACTGGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATCTGGCTGATGTTTCCTaGGCATCAACAATAGCTGCA +
Preference number: 5 (lower is better)
Translates to: MELELGRVISCHIDAGHHLADVS*ASTIAA
Trigger: TGCAGCTATTGTTGATGCCAAGGAAACATCAGCCAG...ATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCCAGTTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp GGAGTTAGGGAGGGTGATAAGCTGCCACATAGATGCTGGGCATCATGCTTAGATCTGGCTGATGTTTCCTaGGCATCAACAATAGCTGCA +
Preference number: 5 (lower is better)
Translates to: GVREGDKLPHRCWASCLDLADVS*ASTIAA
Trigger: TGCAGCTATTGTTGATGCCAAGGAAACATCAGCCAG...ATCTAAGCATGATGCCCAGCATCTATGTGGCAGCTTATCACCCTCCCTAACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS-3UTR CAA 90 bp TTTCTCAAAACAATTAATTTCTGCATACCAATCTTTCAGTTCACCCCACCTGTGGGTCAGGAAGATGGCTaGCCCGACGAACTGACCACT +
Preference number: 5 (lower is better)
Translates to: FLKTINFCIPIFQFTPPVGQEDG*PDELTT
Trigger: AGTGGTCAGTTCGTCGGGCAAGCCATCTTCCTGACC...CACAGGTGGGGTGAACTGAAAGATTGGTATGCAGAAATTAATTGTTTTGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS CAA 72 bp CACCGTGTGACAGCTGGGGCCGAGAGGGTGACCTCCTaGCCGGATGCACTCAGGTGGAGGCAGGAAGGAAGC +
Preference number: 6 (lower is better)
Translates to: HRVTAGAERVTS*PDALRWRQEGS
Trigger: GCTTCCTTCCTGCCTCCACCTGAGTGCATCCGGCAAGGAGGTCACCCTCTCGGCCCCAGCTGTCACACGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000236779.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS GCA 72 bp GTAGCGCACCAGCAAGCTGGCCTCCGTAGCCACCAGTaGCAGGCAAAATGCGGTCACCCAGATGCCGACCCA +
Preference number: 6 (lower is better)
Translates to: VAHQQAGLRSHQ*QAKCGHPDADP
Trigger: TGGGTCGGCATCTGGGTGACCGCATTTTGCCTGGCACTGGTGGCTACGGAGGCCAGCTTGCTGGTGCGCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000236779.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS CCA 72 bp AGCACTGGCCCTGTGCTGCTAAGGATAGTGAGGGGCTaGCCTGCCATCAGGCAGAAGGCAGCTCCAGCCACC +
Preference number: 6 (lower is better)
Translates to: STGPVLLRIVRG*PAIRQKAAPAT
Trigger: GGTGGCTGGAGCTGCCTTCTGCCTGATGGCAGGCCAGCCCCTCACTATCCTTAGCAGCACAGGGCCAGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000115694.3
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000236779.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS CCA 72 bp GCATTGGACTCTCTGCAGGGCCTGATGCCCATGGTCTaGATGTGGTGCTGGGGTCTCTGCAGGAGCAAGGCC +
Preference number: 6 (lower is better)
Translates to: ALDSLQGLMPMV*MWCWGLCRSKA
Trigger: GGCCTTGCTCCTGCAGAGACCCCAGCACCACATCCAGACCATGGGCATCAGGCCCTGCAGAGAGTCCAATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000236779.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS TCA 72 bp GGTGTCAAGGCCACAGCCCAGCAGGATGGCCAGGACTaGGGAAAAGTCGCCCAACACCTTGCGCACCACAGA +
Preference number: 6 (lower is better)
Translates to: GVKATAQQDGQD*GKVAQHLAHHR
Trigger: TCTGTGGTGCGCAAGGTGTTGGGCGACTTTTCCTCAGTCCTGGCCATCCTGCTGGGCTGTGGCCTTGACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000236779.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS TCA 72 bp GGACGAACACCACCAAGCCCGTCAGCCTCTGTTCCCTaGTGCCCAGGAAATTGGGGGCTTCTCCAGGGATGC +
Preference number: 6 (lower is better)
Translates to: GRTPPSPSASVP*CPGNWGLLQGC
Trigger: GCATCCCTGGAGAAGCCCCCAATTTCCTGGGCATCAGGGAACAGAGGCTGACGGGCTTGGTGGTGTTCGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236779.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS GCA 72 bp CGCCCATGTCTAGCTTTTCCTCGAACAGCAGCCACCTaGCTGTCTCTCGCCACTCTAGTGCCTGGGGCCAAC +
Preference number: 6 (lower is better)
Translates to: RPCLAFPRTAAT*LSLATLVPGAN
Trigger: GTTGGCCCCAGGCACTAGAGTGGCGAGAGACAGGCAGGTGGCTGCTGTTCGAGGAAAAGCTAGACATGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000236779.2
ENSMUST00000237174.2
CDS GCA 72 bp CCACTGGAATTGCGGGTCACTGAGGAGGACAGCAGCTaGCCGTCCCATCTCATGGTAGCTCCTTCCCAGGGT +
Preference number: 6 (lower is better)
Translates to: PLELRVTEEDSS*PSHLMVAPSQG
Trigger: ACCCTGGGAAGGAGCTACCATGAGATGGGACGGGCAGCTGCTGTCCTCCTCAGTGACCCGCAATTCCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000236779.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS TCA 72 bp GCTGTCCTCTCAGTTCTGGGCTCAGTGACTCCCCACTaGCTACCTGCTCCACAAGCTCCAGGAGGCTCTGAG +
Preference number: 6 (lower is better)
Translates to: AVLSVLGSVTPH*LPAPQAPGGSE
Trigger: CTCAGAGCCTCCTGGAGCTTGTGGAGCAGGTAGTCAGTGGGGAGTCACTGAGCCCAGAACTGAGAGGACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000236779.2
ENSMUST00000237174.2
CDS TCA 72 bp TGGATGTGGTGCTGGGGTCTCTGCAGGAGCAAGGCCTaGAGCTGTCCTCTCAGTTCTGGGCTCAGTGACTCC +
Preference number: 6 (lower is better)
Translates to: WMWCWGLCRSKA*SCPLSSGLSDS
Trigger: GGAGTCACTGAGCCCAGAACTGAGAGGACAGCTTCAGGCCTTGCTCCTGCAGAGACCCCAGCACCACATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000236779.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS CAA 90 bp CCGGCGCACGTCCTGAATAAGACCCCCAAAGAGCCTGCCTGTCCTTaGCAATTCTGGGATGGGTGTGTGCGGTCCGTGATGGTGCTTGTC +
Preference number: 6 (lower is better)
Translates to: PAHVLNKTPKEPACP*QFWDGCVRSVMVLV
Trigger: GACAAGCACCATCACGGACCGCACACACCCATCCCAGAATTGCAAAGGACAGGCAGGCTCTTTGGGGGTCTTATTCAGGACGTGCGCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000115694.3
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000236779.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS CAA 90 bp AAGACCCACTCCAGTGCCTTCCGGATGGCCACCAGGCCCAGTAACTaGAGCACAGGTGCCAGGAAGATGGAGACACCTGTAAGGACGAAC +
Preference number: 6 (lower is better)
Translates to: KTHSSAFRMATRPSN*STGARKMETPVRTN
Trigger: GTTCGTCCTTACAGGTGTCTCCATCTTCCTGGCACCTGTGCTCAAGTTACTGGGCCTGGTGGCCATCCGGAAGGCACTGGAGTGGGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236779.2
CDS TCA 72 bp TGCCAGAAGGTCAGGAAGATGGCTTGCCCGACGAACTaGCCACTGGAATTGCGGGTCACTGAGGAGGACAGC +
Preference number: 6 (lower is better)
Translates to: CQKVRKMACPTN*PLELRVTEEDS
Trigger: GCTGTCCTCCTCAGTGACCCGCAATTCCAGTGGTCAGTTCGTCGGGCAAGCCATCTTCCTGACCTTCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000236779.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS CCA 72 bp AGGAAGGCATCCAGAGCTGCCAGAAGGTCAGGAAGATaGCTTGCCCGACGAACTGACCACTGGAATTGCGGG +
Preference number: 6 (lower is better)
Translates to: RKASRAARRSGR*LARRTDHWNCG
Trigger: CCCGCAATTCCAGTGGTCAGTTCGTCGGGCAAGCCATCTTCCTGACCTTCTGGCAGCTCTGGATGCCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000236779.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS CAA 72 bp AGGCATCCAGAGCTGCCAGAAGGTCAGGAAGATGGCTaGCCCGACGAACTGACCACTGGAATTGCGGGTCAC +
Preference number: 6 (lower is better)
Translates to: RHPELPEGQEDG*PDELTTGIAGH
Trigger: GTGACCCGCAATTCCAGTGGTCAGTTCGTCGGGCAAGCCATCTTCCTGACCTTCTGGCAGCTCTGGATGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000236779.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS CAA 72 bp AAGCCCGTCAGCCTCTGTTCCCTGATGCCCAGGAAATaGGGGGCTTCTCCAGGGATGCAGGCTTTGCTCTCT +
Preference number: 6 (lower is better)
Translates to: KPVSLCSLMPRK*GASPGMQALLS
Trigger: AGAGAGCAAAGCCTGCATCCCTGGAGAAGCCCCCAATTTCCTGGGCATCAGGGAACAGAGGCTGACGGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236779.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS CAA 90 bp TGCTTCAGTGGGGCGTCCTCATCACGAGAAGCCTTTCTGAAAGCATaGGACTCTCTGCAGGGCCTGATGCCCATGGTCTGGATGTGGTGC +
Preference number: 6 (lower is better)
Translates to: CFSGASSSREAFLKA*DSLQGLMPMVWMWC
Trigger: GCACCACATCCAGACCATGGGCATCAGGCCCTGCAGAGAGTCCAATGCTTTCAGAAAGGCTTCTCGTGATGAGGACGCCCCACTGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000236779.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS CAA 72 bp CCCAGGAAATTGGGGGCTTCTCCAGGGATGCAGGCTTaGCTCTCTCTCCGAAGACTGTCTATGTGGGCCAAG +
Preference number: 6 (lower is better)
Translates to: PRKLGASPGMQA*LSLRRLSMWAK
Trigger: CTTGGCCCACATAGACAGTCTTCGGAGAGAGAGCAAAGCCTGCATCCCTGGAGAAGCCCCCAATTTCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236779.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS CAA 90 bp TCCCTGATGCCCAGGAAATTGGGGGCTTCTCCAGGGATGCAGGCTTaGCTCTCTCTCCGAAGACTGTCTATGTGGGCCAAGGAGATGACA +
Preference number: 6 (lower is better)
Translates to: SLMPRKLGASPGMQA*LSLRRLSMWAKEMT
Trigger: TGTCATCTCCTTGGCCCACATAGACAGTCTTCGGAGAGAGAGCAAAGCCTGCATCCCTGGAGAAGCCCCCAATTTCCTGGGCATCAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236779.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS CAA 90 bp AGGCCCAGTAACATGAGTGGGAAGACAATGGCTGCAGGGGTAGACTaGACTACCCAAAGCAGACCTAGGCAGGCAAGCTGGATGGCTGTG +
Preference number: 6 (lower is better)
Translates to: RPSNMSGKTMAAGVD*TTQSRPRQASWMAV
Trigger: CACAGCCATCCAGCTTGCCTGCCTAGGTCTGCTTTGGGTAGTCAAGTCTACCCCTGCAGCCATTGTCTTCCCACTCATGTTACTGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS TCA 72 bp TCTCTCTCCGAAGACTGTCTATGTGGGCCAAGGAGATaGCAGTGGCTGAGACGTACCATGGCAGCCCAAGTG +
Preference number: 6 (lower is better)
Translates to: SLSEDCLCGPRR*QWLRRTMAAQV
Trigger: CACTTGGGCTGCCATGGTACGTCTCAGCCACTGTCATCTCCTTGGCCCACATAGACAGTCTTCGGAGAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236779.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS TCA 72 bp GCCGGATGCACTCAGGTGGAGGCAGGAAGGAAGCATTaGCTAGACCTGGCACACTTAAGATGTCCTCTGTGT +
Preference number: 6 (lower is better)
Translates to: AGCTQVEAGRKH*LDLAHLRCPLC
Trigger: ACACAGAGGACATCTTAAGTGTGCCAGGTCTAGTCAATGCTTCCTTCCTGCCTCCACCTGAGTGCATCCGGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000236779.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS TCA 72 bp TGGCTGAGACGTACCATGGCAGCCCAAGTGCCGATGTaGACAGCATCAAAACAGCCACACAGAAGAGGTCCA +
Preference number: 6 (lower is better)
Translates to: WLRRTMAAQVPM*TASKQPHRRGP
Trigger: TGGACCTCTTCTGTGTGGCTGTTTTGATGCTGTTCACATCGGCACTTGGGCTGCCATGGTACGTCTCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236779.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS CCA 72 bp GCTGAGAAACACTGCCTGTCCTTTGCAATTCTGGGATaGGTGTGTGCGGTCCGTGATGGTGCTTGTCTTCTG +
Preference number: 6 (lower is better)
Translates to: AEKHCLSFAILG*VCAVRDGACLL
Trigger: CAGAAGACAAGCACCATCACGGACCGCACACACCCATCCCAGAATTGCAAAGGACAGGCAGTGTTTCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074298.13
ENSMUST00000235181.2
CDS CCA 72 bp ACACAGCTGAGAAACACTGCCTGTCCTTTGCAATTCTaGGATGGGTGTGTGCGGTCCGTGATGGTGCTTGTC +
Preference number: 6 (lower is better)
Translates to: TQLRNTACPLQF*DGCVRSVMVLV
Trigger: GACAAGCACCATCACGGACCGCACACACCCATCCCAGAATTGCAAAGGACAGGCAGTGTTTCTCAGCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074298.13
ENSMUST00000235181.2
CDS CAA 72 bp CGTCCATTCAGACGTGTTTCCTCCTGTGCCTGGGTATaGACAGAAGCAACCATAGGCAGAAGACCCTGGCCT +
Preference number: 6 (lower is better)
Translates to: RPFRRVSSCAWV*TEATIGRRPWP
Trigger: AGGCCAGGGTCTTCTGCCTATGGTTGCTTCTGTCAATACCCAGGCACAGGAGGAAACACGTCTGAATGGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000236779.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS CAA 72 bp AACATGAGTGGGAAGACAATGGCTGCAGGGGTAGACTaGACTACCCAAAGCAGACCTAGGCAGGCAAGCTGG +
Preference number: 6 (lower is better)
Translates to: NMSGKTMAAGVD*TTQSRPRQASW
Trigger: CCAGCTTGCCTGCCTAGGTCTGCTTTGGGTAGTCAAGTCTACCCCTGCAGCCATTGTCTTCCCACTCATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS CAA 90 bp TGGCCAGGTAAATGTAGAACACAGCTGAGAAACACTGCCTGTCCTTaGCAATTCTGGGATGGGTGTGTGCGGTCCGTGATGGTGCTTGTC +
Preference number: 6 (lower is better)
Translates to: WPGKCRTQLRNTACP*QFWDGCVRSVMVLV
Trigger: GACAAGCACCATCACGGACCGCACACACCCATCCCAGAATTGCAAAGGACAGGCAGTGTTTCTCAGCTGTGTTCTACATTTACCTGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074298.13
ENSMUST00000235181.2
CDS CAA 90 bp GCCTGGGTATTGACAGAAGCAACCATAGGCAGAAGACCCTGGCCTTaGGATTGGATAGGCACGGATCAAATTCAGCATCTTCCCCATGGC +
Preference number: 6 (lower is better)
Translates to: AWVLTEATIGRRPWP*DWIGTDQIQHLPHG
Trigger: GCCATGGGGAAGATGCTGAATTTGATCCGTGCCTATCCAATCCAAAGGCCAGGGTCTTCTGCCTATGGTTGCTTCTGTCAATACCCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000236779.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS GCA 72 bp AGTTCTGAATCTTCACTGTCATTTCCACTGAACAAGTaGTCTGGCTCGGACCTGTTCTCGGGGATGGTCTCC +
Preference number: 6 (lower is better)
Translates to: SSESSLSFPLNK*SGSDLFSGMVS
Trigger: GGAGACCATCCCCGAGAACAGGTCCGAGCCAGAGCACTTGTTCAGTGGAAATGACAGTGAAGATTCAGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000236779.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS CAA 72 bp CATGCCGCAGGAGCAGCATGTCTGGCTGATGTTTCCTaGGCATCAACAATAGCTGCACTCTCTTCACGAACT +
Preference number: 6 (lower is better)
Translates to: HAAGAACLADVS*ASTIAALSSRT
Trigger: AGTTCGTGAAGAGAGTGCAGCTATTGTTGATGCCAAGGAAACATCAGCCAGACATGCTGCTCCTGCGGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS CAA 72 bp AGAAGCAACCATAGGCAGAAGACCCTGGCCTTTGGATaGGATAGGCACGGATCAAATTCAGCATCTTCCCCA +
Preference number: 6 (lower is better)
Translates to: RSNHRQKTLAFG*DRHGSNSASSP
Trigger: TGGGGAAGATGCTGAATTTGATCCGTGCCTATCCAATCCAAAGGCCAGGGTCTTCTGCCTATGGTTGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000236779.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS CAA 72 bp CTTGGCATCAACAATAGCTGCACTCTCTTCACGAACTaGAGCACAGGTGCCAGGAAGATGGAGACACCTGTA +
Preference number: 6 (lower is better)
Translates to: LGINNSCTLFTN*STGARKMETPV
Trigger: TACAGGTGTCTCCATCTTCCTGGCACCTGTGCTCAAGTTCGTGAAGAGAGTGCAGCTATTGTTGATGCCAAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115694.3
ENSMUST00000237174.2
CDS CAA 90 bp GGTATTGACAGAAGCAACCATAGGCAGAAGACCCTGGCCTTTGGATaGGATAGGCACGGATCAAATTCAGCATCTTCCCCATGGCATCAT +
Preference number: 6 (lower is better)
Translates to: GIDRSNHRQKTLAFG*DRHGSNSASSPWHH
Trigger: ATGATGCCATGGGGAAGATGCTGAATTTGATCCGTGCCTATCCAATCCAAAGGCCAGGGTCTTCTGCCTATGGTTGCTTCTGTCAATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000236779.2
ENSMUST00000237174.2
ENSMUST00000237595.2
CDS TCA 72 bp GATACATCAGTTCTGAATCTTCACTGTCATTTCCACTaGACAAGTGCTCTGGCTCGGACCTGTTCTCGGGGA +
Preference number: 6 (lower is better)
Translates to: DTSVLNLHCHFH*TSALARTCSRG
Trigger: TCCCCGAGAACAGGTCCGAGCCAGAGCACTTGTTCAGTGGAAATGACAGTGAAGATTCAGAACTGATGTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000074298.13
ENSMUST00000115694.3
ENSMUST00000235181.2
ENSMUST00000236124.2
ENSMUST00000236126.2
ENSMUST00000236779.2
ENSMUST00000237174.2
ENSMUST00000237595.2