Pregenerated sensors for SLC4A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028962Ensembl transcript IDs: ENSMUST00000080067.13, ENSMUST00000115047.3, ENSMUST00000115049.9, ENSMUST00000141966.8, ENSMUST00000155598.8
Found 318 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GAGAGGACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGCCCCTCAGTCCCTCTaGTGTGCCTCTGGACAGCAG | + |
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Preference number: 2 (lower is better) Translates to: ERTPSPHPLVPLLCLWTAAPQSL*CASGQQ Trigger: CTGCTGTCCAGAGGCACAGCAGAGGGACTGAGGGGC...TGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTCCTCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| 3UTR-3UTR GCA 90 bp | CAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCGCCCCTCAGTCCCTCTaGTGTGCCTCTGGACAGCAG | + |
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Preference number: 2 (lower is better) Translates to: QPSPLSPSAVPLDSSYTGAPQSL*CASGQQ Trigger: CTGCTGTCCAGAGGCACAGCAGAGGGACTGAGGGGC...GCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| 3UTR-3UTR GCA 90 bp | CCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGCCCCTCAGTCCCTCTaGTGTGCCTCTGGACAGCAG | + |
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Preference number: 2 (lower is better) Translates to: PQPSPLSPSAVPLDSSYTAPQSL*CASGQQ Trigger: CTGCTGTCCAGAGGCACAGCAGAGGGACTGAGGGGC...TGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| 3UTR GCA 72 bp | AGGACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTaGCTCTGGACAGCAGTTACACAGGCATGGGCCCCC | + |
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Preference number: 3 (lower is better) Translates to: RTPSPHPLVPLL*LWTAVTQAWAP Trigger: GGGGGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTCCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| 3UTR GCA 72 bp | TGCCTCTGGACAGCAGTTACACAGGCATGGGCCCCCTaGCCCTCAGTCCCTCTGCTGTGCCTCTGGACAGCA | + |
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Preference number: 3 (lower is better) Translates to: CLWTAVTQAWAP*PSVPLLCLWTA Trigger: TGCTGTCCAGAGGCACAGCAGAGGGACTGAGGGGCAGGGGGCCCATGCCTGTGTAACTGCTGTCCAGAGGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR GCA 90 bp | GACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACGCTGGCCCGGGGAGCTaGCTCCTGGTGGGGCGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DPQPSPLSPSAVPLDSSYAGPGS*LLVGRL Trigger: CAGACGCCCCACCAGGAGGCAGCTCCCCGGGCCAGC...GTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR GCA 90 bp | CACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCGCTGGCCCGGGGAGCTaGCTCCTGGTGGGGCGTCTG | + |
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Preference number: 4 (lower is better) Translates to: HPLVPLLCLWTAVTQAWAAGPGS*LLVGRL Trigger: CAGACGCCCCACCAGGAGGCAGCTCCCCGGGCCAGC...GGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR CCA 90 bp | GAGAGGACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCATTCCGTCCTGGGCCCTaGGGAGTCTTGCGACGGCGG | + |
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Preference number: 4 (lower is better) Translates to: ERTPSPHPLVPLLCLWTAFRPGP*GVLRRR Trigger: CCGCCGTCGCAAGACTCCCCAGGGCCCAGGACGGAA...TGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTCCTCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR CCA 90 bp | GAGAGGACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCATGGGGGTCTCTCCAGTaGGAGAGGCACCAGGGCGCC | + |
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Preference number: 4 (lower is better) Translates to: ERTPSPHPLVPLLCLWTAWGSLQ*ERHQGA Trigger: GGCGCCCTGGTGCCTCTCCCACTGGAGAGACCCCCA...TGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTCCTCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR GCA 90 bp | GACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACCCCCGGGGCTTCTCCTaGCCAGACTGCCCAGAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: DPQPSPLSPSAVPLDSSYPRGFS*PDCPEA Trigger: CGCTTCTGGGCAGTCTGGGCAGGAGAAGCCCCGGGG...GTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR CCA 90 bp | CCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCCCCTGGGGGTCTCTCCAGTaGGAGAGGCACCAGGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PLVPLLCLWTAVTQAWAPWGSLQ*ERHQGA Trigger: GGCGCCCTGGTGCCTCTCCCACTGGAGAGACCCCCA...GGGGGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR CCA 90 bp | GACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACCGGGGAGCTGCCTCCTaGTGGGGCGTCTGTGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: DPQPSPLSPSAVPLDSSYRGAAS*WGVCVG Trigger: CCCTACACAGACGCCCCACCAGGAGGCAGCTCCCCG...GTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR CCA 90 bp | CCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACACTTATGCGGGGCCCGTaGCCGTGCCCGAGGTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: PQPSPLSPSAVPLDSSYTLMRGP*PCPRCG Trigger: CCCACACCTCGGGCACGGCCACGGGCCCCGCATAAG...TGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR CCA 90 bp | CCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGCTTATGCGGGGCCCGTaGCCGTGCCCGAGGTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSPHPLVPLLCLWTAVTQLMRGP*PCPRCG Trigger: CCCACACCTCGGGCACGGCCACGGGCCCCGCATAAG...CTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR TCA 90 bp | CCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCCCCATCTGCTCGACCACCTaGTGGGCCACCCCAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: PLVPLLCLWTAVTQAWAPICSTT*WATPGR Trigger: CCTGCCTGGGGTGGCCCATCAGGTGGTCGAGCAGAT...GGGGGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR TCA 90 bp | CCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCCCCGGTGTTTGGGCGGCATaGGCAGCAGGTGCAGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLVPLLCLWTAVTQAWAPGVWAA*AAGAAA Trigger: AGCGGCTGCACCTGCTGCTCATGCCGCCCAAACACC...GGGGGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR GCA 90 bp | TTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCCCCTGCACCTCATGGGGCTTATaGGGGGCCCGTGGCCGTGCC | + |
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Preference number: 4 (lower is better) Translates to: LVPLLCLWTAVTQAWAPCTSWGL*GARGRA Trigger: GGCACGGCCACGGGCCCCGCATAAGCCCCATGAGGT...GCAGGGGGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR GCA 90 bp | CACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCACCTCATGGGGCTTATaGGGGGCCCGTGGCCGTGCC | + |
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Preference number: 4 (lower is better) Translates to: HPLVPLLCLWTAVTQAWATSWGL*GARGRA Trigger: GGCACGGCCACGGGCCCCGCATAAGCCCCATGAGGT...GGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR GCA 90 bp | GAGAGGACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGGAGCTCCAGGAGGCTaGGGAAGGACAGTGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ERTPSPHPLVPLLCLWTAGAPGG*GRTVRP Trigger: TGGCCTCACTGTCCTTCCGCAGCCTCCTGGAGCTCC...TGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTCCTCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR GCA 90 bp | GAGAGGACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGGAGCGGGTAATACCTaGAGGTGGTGCTGGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ERTPSPHPLVPLLCLWTAGAGNT*RWCWGW Trigger: CCACCCCCAGCACCACCTGCAGGTATTACCCGCTCC...TGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTCCTCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR GCA 90 bp | GAGAGGACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGGCAGCAGGCGGCCCTaGTCCTCTCGCTTCTTTAGC | + |
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Preference number: 4 (lower is better) Translates to: ERTPSPHPLVPLLCLWTAGSRRP*SSRFFS Trigger: GCTAAAGAAGCGAGAGGAGCAGGGCCGCCTGCTGCC...TGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTCCTCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR CCA 90 bp | CCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGTTCCGTCCTGGGCCCTaGGGAGTCTTGCGACGGCGG | + |
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Preference number: 4 (lower is better) Translates to: PSPHPLVPLLCLWTAVTQFRPGP*GVLRRR Trigger: CCGCCGTCGCAAGACTCCCCAGGGCCCAGGACGGAA...CTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR CCA 90 bp | ACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACATTCCGTCCTGGGCCCTaGGGAGTCTTGCGACGGCGG | + |
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Preference number: 4 (lower is better) Translates to: TPSPHPLVPLLCLWTAVTFRPGP*GVLRRR Trigger: CCGCCGTCGCAAGACTCCCCAGGGCCCAGGACGGAA...TGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR CCA 90 bp | TTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCCCCTGCTGGGGGTCTCTCCAGTaGGAGAGGCACCAGGGCGCC | + |
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Preference number: 4 (lower is better) Translates to: LVPLLCLWTAVTQAWAPCWGSLQ*ERHQGA Trigger: GGCGCCCTGGTGCCTCTCCCACTGGAGAGACCCCCA...GCAGGGGGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR CCA 90 bp | CACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCCGGGGAGCTGCCTCCTaGTGGGGCGTCTGTGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: HPLVPLLCLWTAVTQAWARGAAS*WGVCVG Trigger: CCCTACACAGACGCCCCACCAGGAGGCAGCTCCCCG...GGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR CCA 90 bp | CCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCCCCGTCCAGGCTGGGCTTTaGTCAAGGGACGCCCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: PLVPLLCLWTAVTQAWAPVQAGL*SRDAPQ Trigger: CTGCGGGGCGTCCCTTGACCAAAGCCCAGCCTGGAC...GGGGGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR CCA 90 bp | ACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACAGCCGTGCCCGAGGTGTaGGGCCAGGCTCTCGACCTT | + |
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Preference number: 4 (lower is better) Translates to: TPSPHPLVPLLCLWTAVTAVPEV*GQALDL Trigger: AAGGTCGAGAGCCTGGCCCCACACCTCGGGCACGGC...TGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR CCA 90 bp | CCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGCCGTGCCCGAGGTGTaGGGCCAGGCTCTCGACCTT | + |
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Preference number: 4 (lower is better) Translates to: PQPSPLSPSAVPLDSSYTAVPEV*GQALDL Trigger: AAGGTCGAGAGCCTGGCCCCACACCTCGGGCACGGC...TGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR CCA 90 bp | GAGAGGACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAAAAGCTGTGTTGGGCTaGCCCCGGGGCTTCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: ERTPSPHPLVPLLCLWTAKAVLG*PRGFSC Trigger: GCAGGAGAAGCCCCGGGGCCAGCCCAACACAGCTTT...TGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTCCTCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR GCA 90 bp | GACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACCAGAGTTCCTGTCTGTaGCCCTTTGCTGGCCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: DPQPSPLSPSAVPLDSSYQSSCL*PFAGPG Trigger: CCCCGGGCCAGCAAAGGGGCACAGACAGGAACTCTG...GTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR GCA 90 bp | CCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCCCCCAGAGTTCCTGTCTGTaGCCCTTTGCTGGCCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: PLVPLLCLWTAVTQAWAPQSSCL*PFAGPG Trigger: CCCCGGGCCAGCAAAGGGGCACAGACAGGAACTCTG...GGGGGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGG 63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR GCA 90 bp | CCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGCGTCACCTCCAGCTGTaGCACTGGCCACCGCCACCA | + |
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Preference number: 4 (lower is better) Translates to: PSPHPLVPLLCLWTAVTQRHLQL*HWPPPP Trigger: TGGTGGCGGTGGCCAGTGGCACAGCTGGAGGTGACG...CTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR GCA 90 bp | CCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCCCCGGAGCTCCAGGAGGCTaGGGAAGGACAGTGAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: PLVPLLCLWTAVTQAWAPGAPGG*GRTVRP Trigger: TGGCCTCACTGTCCTTCCGCAGCCTCCTGGAGCTCC...GGGGGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR GCA 90 bp | GAGAGGACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAAGCAGCTCCTCGCCCTaGACTTCAGAAGGCGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: ERTPSPHPLVPLLCLWTASSSSP*TSEGGS Trigger: GCTACCGCCTTCTGAAGTGCAGGGCGAGGAGCTGCT...TGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTCCTCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR GCA 90 bp | GACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACGGCAGCAGGCGGCCCTaGTCCTCTCGCTTCTTTAGC | + |
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Preference number: 4 (lower is better) Translates to: DPQPSPLSPSAVPLDSSYGSRRP*SSRFFS Trigger: GCTAAAGAAGCGAGAGGAGCAGGGCCGCCTGCTGCC...GTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR GCA 90 bp | CCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGCCCCGGGGCTTCTCCTaGCCAGACTGCCCAGAAGCG | + |
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Preference number: 4 (lower is better) Translates to: PHPLVPLLCLWTAVTQAWPRGFS*PDCPEA Trigger: CGCTTCTGGGCAGTCTGGGCAGGAGAAGCCCCGGGG...CCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR CCA 90 bp | CCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGCGGGGAGCTGCCTCCTaGTGGGGCGTCTGTGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: PSPLSPSAVPLDSSYTGMRGAAS*WGVCVG Trigger: CCCTACACAGACGCCCCACCAGGAGGCAGCTCCCCG...CATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR CCA 90 bp | CCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCCCCCTCCAGCTGTGCCACTaGCCACCGCCACCATCTCCT | + |
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Preference number: 4 (lower is better) Translates to: PLVPLLCLWTAVTQAWAPLQLCH*PPPPSP Trigger: AGGAGATGGTGGCGGTGGCCAGTGGCACAGCTGGAG...GGGGGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGG 63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR CCA 90 bp | CCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGTCCAGGCTGGGCTTTaGTCAAGGGACGCCCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: PSPHPLVPLLCLWTAVTQVQAGL*SRDAPQ Trigger: CTGCGGGGCGTCCCTTGACCAAAGCCCAGCCTGGAC...CTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR CCA 90 bp | CACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCGTCCAGGCTGGGCTTTaGTCAAGGGACGCCCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: HPLVPLLCLWTAVTQAWAVQAGL*SRDAPQ Trigger: CTGCGGGGCGTCCCTTGACCAAAGCCCAGCCTGGAC...GGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR CCA 90 bp | GACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACAAAGCTGTGTTGGGCTaGCCCCGGGGCTTCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: DPQPSPLSPSAVPLDSSYKAVLG*PRGFSC Trigger: GCAGGAGAAGCCCCGGGGCCAGCCCAACACAGCTTT...GTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR CCA 90 bp | GAGAGGACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCACAGCAGGCAGCAGGCTaGCCACCATCATCCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: ERTPSPHPLVPLLCLWTAQQAAG*PPSSTQ Trigger: CTGTGTGGATGATGGTGGCCAGCCTGCTGCCTGCTG...TGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTCCTCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR TCA 90 bp | CCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGATCTGCTCGACCACCTaGTGGGCCACCCCAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSPLSPSAVPLDSSYTGMICSTT*WATPGR Trigger: CCTGCCTGGGGTGGCCCATCAGGTGGTCGAGCAGAT...CATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR TCA 90 bp | CCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCCCCGTGCATTGGCATGGGTaGCAGAGCGGACAGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PLVPLLCLWTAVTQAWAPVHWHG*QSGQWQ Trigger: CTGCCACTGTCCGCTCTGTCACCCATGCCAATGCAC...GGGGGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR TCA 90 bp | CCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGGTGTTTGGGCGGCATaGGCAGCAGGTGCAGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PHPLVPLLCLWTAVTQAWGVWAA*AAGAAA Trigger: AGCGGCTGCACCTGCTGCTCATGCCGCCCAAACACC...CCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCCAGAGTTCCTGTCTGTaGCCCTTTGCTGGCCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HPLVPLLCLWTAVTQAWAQSSCL*PFAGPG Trigger: CCCCGGGCCAGCAAAGGGGCACAGACAGGAACTCTG...GGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGCGTCACCTCCAGCTGTaGCACTGGCCACCGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: PHPLVPLLCLWTAVTQAWRHLQL*HWPPPP Trigger: TGGTGGCGGTGGCCAGTGGCACAGCTGGAGGTGACG...CCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | GAGAGGACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCATCACTTGGGTGGCTGTaGTTTAGCAGGAGGGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: ERTPSPHPLVPLLCLWTASLGWL*FSRRAR Trigger: ACGGGCCCTCCTGCTAAAGCACAGCCACCCAAGTGA...TGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTCCTCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGGAGCGGGTAATACCTaGAGGTGGTGCTGGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PSPHPLVPLLCLWTAVTQGAGNT*RWCWGW Trigger: CCACCCCCAGCACCACCTGCAGGTATTACCCGCTCC...CTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCGGAGCGGGTAATACCTaGAGGTGGTGCTGGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QPSPLSPSAVPLDSSYTGGAGNT*RWCWGW Trigger: CCACCCCCAGCACCACCTGCAGGTATTACCCGCTCC...GCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | GACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACAGCAGCTCCTCGCCCTaGACTTCAGAAGGCGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: DPQPSPLSPSAVPLDSSYSSSSP*TSEGGS Trigger: GCTACCGCCTTCTGAAGTGCAGGGCGAGGAGCTGCT...GTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | GAGAGGACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGCCAGGCAGAGCAACTaGAAGGCAGTGAACAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ERTPSPHPLVPLLCLWTAARQSN*KAVNRC Trigger: GCACCTGTTCACTGCCTTGCAGTTGCTCTGCCTGGC...TGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTCCTCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACACGGGATCCAGCCTCCTaGAGGATCTCCTCGAACCGC | + |
|
Preference number: 4 (lower is better) Translates to: PQPSPLSPSAVPLDSSYTRDPAS*RISSNR Trigger: GCGGTTCGAGGAGATCCTCCAGGAGGCTGGATCCCG...TGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCCGGGATCCAGCCTCCTaGAGGATCTCCTCGAACCGC | + |
|
Preference number: 4 (lower is better) Translates to: QPSPLSPSAVPLDSSYTGRDPAS*RISSNR Trigger: GCGGTTCGAGGAGATCCTCCAGGAGGCTGGATCCCG...GCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCCTCCAGCTGTGCCACTaGCCACCGCCACCATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HPLVPLLCLWTAVTQAWALQLCH*PPPPSP Trigger: AGGAGATGGTGGCGGTGGCCAGTGGCACAGCTGGAG...GGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | GAGAGGACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCATATCTTGGGCAGACTTaGGCTCTAGCCCAGCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ERTPSPHPLVPLLCLWTAYLGQT*ALAQPL Trigger: CAGGGGCTGGGCTAGAGCCCAAGTCTGCCCAAGATA...TGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTCCTCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGACAGCAGCCAGGCACTaGGGGTCAAGTGCATCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PSPHPLVPLLCLWTAVTQTAARH*GSSASR Trigger: CCGCGATGCACTTGACCCCCAGTGCCTGGCTGCTGT...CTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | GACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACCAGCAGGCAGCAGGCTaGCCACCATCATCCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: DPQPSPLSPSAVPLDSSYQQAAG*PPSSTQ Trigger: CTGTGTGGATGATGGTGGCCAGCCTGCTGCCTGCTG...GTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR TCA 90 bp | CAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCGCTGTCTCCCGCCACTaGGGCTCCTGGTTTTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QPSPLSPSAVPLDSSYTGAVSRH*GSWFLS Trigger: GGACAAAAACCAGGAGCCTCAGTGGCGGGAGACAGC...GCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR TCA 90 bp | CCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGCTGTCTCCCGCCACTaGGGCTCCTGGTTTTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PQPSPLSPSAVPLDSSYTAVSRH*GSWFLS Trigger: GGACAAAAACCAGGAGCCTCAGTGGCGGGAGACAGC...TGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR TCA 90 bp | GAGAGGACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGCAGCGCTGTGGACATaGTCAGCTCTGACACTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: ERTPSPHPLVPLLCLWTAAALWT*SALTLL Trigger: TAGGAGTGTCAGAGCTGATCATGTCCACAGCGCTGC...TGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTCCTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR TCA 90 bp | TTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCCCCTGCGTGCATTGGCATGGGTaGCAGAGCGGACAGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LVPLLCLWTAVTQAWAPCVHWHG*QSGQWQ Trigger: CTGCCACTGTCCGCTCTGTCACCCATGCCAATGCAC...GCAGGGGGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR TCA 90 bp | CCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCAGGAGGTCCCCAATaGCCATGGAGAGGCCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: PSPHPLVPLLCLWTAVTQAGGPQ*PWRGPQ Trigger: TTGTGGGCCTCTCCATGGTCATTGGGGACCTCCTGC...CTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR TCA 90 bp | CACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCGCAGGAGGTCCCCAATaGCCATGGAGAGGCCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: HPLVPLLCLWTAVTQAWAAGGPQ*PWRGPQ Trigger: TTGTGGGCCTCTCCATGGTCATTGGGGACCTCCTGC...GGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR TCA 90 bp | CAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCGCAGGAGGTCCCCAATaGCCATGGAGAGGCCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: QPSPLSPSAVPLDSSYTGAGGPQ*PWRGPQ Trigger: TTGTGGGCCTCTCCATGGTCATTGGGGACCTCCTGC...GCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGAGCTCCAGGAGGCTaGGGAAGGACAGTGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSPLSPSAVPLDSSYTGMGAPGG*GRTVRP Trigger: TGGCCTCACTGTCCTTCCGCAGCCTCCTGGAGCTCC...CATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCCCCTCACTTGGGTGGCTGTaGTTTAGCAGGAGGGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: PLVPLLCLWTAVTQAWAPSLGWL*FSRRAR Trigger: ACGGGCCCTCCTGCTAAAGCACAGCCACCCAAGTGA...GGGGGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCAGCAGCTCCTCGCCCTaGACTTCAGAAGGCGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: HPLVPLLCLWTAVTQAWASSSSP*TSEGGS Trigger: GCTACCGCCTTCTGAAGTGCAGGGCGAGGAGCTGCT...GGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGGCAGCAGGCGGCCCTaGTCCTCTCGCTTCTTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: PHPLVPLLCLWTAVTQAWGSRRP*SSRFFS Trigger: GCTAAAGAAGCGAGAGGAGCAGGGCCGCCTGCTGCC...CCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | GAGAGGACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCACAGAAGACCACTCCCTaGAGCGCTGTGGACATGATC | + |
|
Preference number: 4 (lower is better) Translates to: ERTPSPHPLVPLLCLWTAQKTTP*SAVDMI Trigger: GATCATGTCCACAGCGCTGCAGGGAGTGGTCTTCTG...TGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTCCTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | GAGAGGACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCATATTGCTGCTGCTGCTaGTGCCTGCCTCTGAGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: ERTPSPHPLVPLLCLWTAYCCCC*CLPLSR Trigger: ACGACTCAGAGGCAGGCAGCAGCAGCAGCAGCAATA...TGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTCCTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCGGCTGTGGACATGACTaGCCAAAGCAGGGCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HPLVPLLCLWTAVTQAWAGCGHD*PKQGQA Trigger: TGCCTGGCCCTGCTTTGGGCAGTCATGTCCACAGCC...GGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGCGGGATCCAGCCTCCTaGAGGATCTCCTCGAACCGC | + |
|
Preference number: 4 (lower is better) Translates to: PSPLSPSAVPLDSSYTGMRDPAS*RISSNR Trigger: GCGGTTCGAGGAGATCCTCCAGGAGGCTGGATCCCG...CATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGCTCCAGCTGTGCCACTaGCCACCGCCACCATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PHPLVPLLCLWTAVTQAWLQLCH*PPPPSP Trigger: AGGAGATGGTGGCGGTGGCCAGTGGCACAGCTGGAG...CCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGACAGCAGCCAGGCACTaGGGGTCAAGTGCATCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PSPLSPSAVPLDSSYTGMTAARH*GSSASR Trigger: CCGCGATGCACTTGACCCCCAGTGCCTGGCTGCTGT...CATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGACAGCAGCCAGGCACTaGGGGTCAAGTGCATCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PHPLVPLLCLWTAVTQAWTAARH*GSSASR Trigger: CCGCGATGCACTTGACCCCCAGTGCCTGGCTGCTGT...CCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | ACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACAGAGCCTGAGCAGCCATaGAGTGGGTGCTCCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TPSPHPLVPLLCLWTAVTEPEQP*SGCSWK Trigger: CTTCCAGGAGCACCCACTCCATGGCTGCTCAGGCTC...TGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCCCCCTGCCTCTGAGTCGTTaGAGCCTGAGCAGCCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: PLVPLLCLWTAVTQAWAPLPLSR*SLSSHG Trigger: TCCATGGCTGCTCAGGCTCCAACGACTCAGAGGCAG...GGGGGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGG 61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGAAAGCTGTGTTGGGCTaGCCCCGGGGCTTCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PSPLSPSAVPLDSSYTGMKAVLG*PRGFSC Trigger: GCAGGAGAAGCCCCGGGGCCAGCCCAACACAGCTTT...CATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | GACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACATAGCAAAGCTGTGTTaGGCTGGCCCCGGGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DPQPSPLSPSAVPLDSSYIAKLC*AGPGAS Trigger: AGAAGCCCCGGGGCCAGCCCAACACAGCTTTGCTAT...GTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | ACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGCAGGCAGCAGGCTaGCCACCATCATCCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: TPSPHPLVPLLCLWTAVTQQAAG*PPSSTQ Trigger: CTGTGTGGATGATGGTGGCCAGCCTGCTGCCTGCTG...TGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | GAGAGGACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAAGCAACAGGTCGAGATaGAAGCCAGAGCCCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ERTPSPHPLVPLLCLWTASNRSR*KPEPFC Trigger: GCAGAAGGGCTCTGGCTTCCATCTCGACCTGTTGCT...TGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTCCTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR TCA 90 bp | GACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACTGGGTGGATAGCGGATaGTGGATATGGTGGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: DPQPSPLSPSAVPLDSSYWVDSG*WIWWED Trigger: GTCCTCCCACCATATCCATCATCCGCTATCCACCCA...GTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR TCA 90 bp | CCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACACCAGGCAGGGTCTGCTaGTCGAGGTCTAAGAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: PQPSPLSPSAVPLDSSYTPGRVC*SRSKST Trigger: TGTGCTCTTAGACCTCGATCAGCAGACCCTGCCTGG...TGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR TCA 90 bp | CACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCCCAGGCAGGGTCTGCTaGTCGAGGTCTAAGAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: HPLVPLLCLWTAVTQAWAPGRVC*SRSKST Trigger: TGTGCTCTTAGACCTCGATCAGCAGACCCTGCCTGG...GGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR TCA 90 bp | GACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACGCAGCGCTGTGGACATaGTCAGCTCTGACACTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: DPQPSPLSPSAVPLDSSYAALWT*SALTLL Trigger: TAGGAGTGTCAGAGCTGATCATGTCCACAGCGCTGC...GTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR TCA 90 bp | CCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGTGCATTGGCATGGGTaGCAGAGCGGACAGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PHPLVPLLCLWTAVTQAWVHWHG*QSGQWQ Trigger: CTGCCACTGTCCGCTCTGTCACCCATGCCAATGCAC...CCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | GAGAGGACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCACCACCCCTGTCATACTaGCAATTCGTCTTCGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ERTPSPHPLVPLLCLWTAPPLSY*QFVFAP Trigger: AGGAGCGAAGACGAATTGGCAGTATGACAGGGGTGG...TGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTCCTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | TTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCCCCTGCTCACTTGGGTGGCTGTaGTTTAGCAGGAGGGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LVPLLCLWTAVTQAWAPCSLGWL*FSRRAR Trigger: ACGGGCCCTCCTGCTAAAGCACAGCCACCCAAGTGA...GCAGGGGGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | GAGAGGACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGGGATCATCTTCAGCTaGACCTGCCACCTCTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: ERTPSPHPLVPLLCLWTAGIIFS*TCHLYH Trigger: ATGGTAGAGGTGGCAGGTGCAGCTGAAGATGATCCC...TGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTCCTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCGCCAGGCAGAGCAACTaGAAGGCAGTGAACAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QPSPLSPSAVPLDSSYTGARQSN*KAVNRC Trigger: GCACCTGTTCACTGCCTTGCAGTTGCTCTGCCTGGC...GCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | TTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCCCCTGCGCCAGGCAGAGCAACTaGAAGGCAGTGAACAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LVPLLCLWTAVTQAWAPCARQSN*KAVNRC Trigger: GCACCTGTTCACTGCCTTGCAGTTGCTCTGCCTGGC...GCAGGGGGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGGCTGTGGACATGACTaGCCAAAGCAGGGCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PHPLVPLLCLWTAVTQAWGCGHD*PKQGQA Trigger: TGCCTGGCCCTGCTTTGGGCAGTCATGTCCACAGCC...CCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCTATCTTGGGCAGACTTaGGCTCTAGCCCAGCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HPLVPLLCLWTAVTQAWAYLGQT*ALAQPL Trigger: CAGGGGCTGGGCTAGAGCCCAAGTCTGCCCAAGATA...GGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACATATCTTGGGCAGACTTaGGCTCTAGCCCAGCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PQPSPLSPSAVPLDSSYTYLGQT*ALAQPL Trigger: CAGGGGCTGGGCTAGAGCCCAAGTCTGCCCAAGATA...TGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGAGCCTGAGCAGCCATaGAGTGGGTGCTCCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PHPLVPLLCLWTAVTQAWEPEQP*SGCSWK Trigger: CTTCCAGGAGCACCCACTCCATGGCTGCTCAGGCTC...CCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGCTGCCTCTGAGTCGTTaGAGCCTGAGCAGCCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSPHPLVPLLCLWTAVTQLPLSR*SLSSHG Trigger: TCCATGGCTGCTCAGGCTCCAACGACTCAGAGGCAG...CTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | ACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACAATAGCAAAGCTGTGTTaGGCTGGCCCCGGGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TPSPHPLVPLLCLWTAVTIAKLC*AGPGAS Trigger: AGAAGCCCCGGGGCCAGCCCAACACAGCTTTGCTAT...TGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | TTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCCCCTGCATAGCAAAGCTGTGTTaGGCTGGCCCCGGGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LVPLLCLWTAVTQAWAPCIAKLC*AGPGAS Trigger: AGAAGCCCCGGGGCCAGCCCAACACAGCTTTGCTAT...GCAGGGGGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCCCCGTGAGTGCATTGGCATaGGTGACAGAGCGGACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PLVPLLCLWTAVTQAWAPVSALA*VTERTV Trigger: CACTGTCCGCTCTGTCACCCATGCCAATGCACTCAC...GGGGGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR TCA 90 bp | CAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCTGGGTGGATAGCGGATaGTGGATATGGTGGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QPSPLSPSAVPLDSSYTGWVDSG*WIWWED Trigger: GTCCTCCCACCATATCCATCATCCGCTATCCACCCA...GCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR TCA 90 bp | CACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCTGGGTGGATAGCGGATaGTGGATATGGTGGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HPLVPLLCLWTAVTQAWAWVDSG*WIWWED Trigger: GTCCTCCCACCATATCCATCATCCGCTATCCACCCA...GGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR TCA 90 bp | GACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACATTGCTTGTCAGACATaGGGGTGGAAATGGAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: DPQPSPLSPSAVPLDSSYIACQT*GWKWSG Trigger: GCCGCTCCATTTCCACCCTCATGTCTGACAAGCAAT...GTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | GACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACAGCAGCTTCAGCTCATaGTTGGACTTGGAGCGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: DPQPSPLSPSAVPLDSSYSSFSS*LDLERV Trigger: TACCCGCTCCAAGTCCAAGCATGAGCTGAAGCTGCT...GTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | TTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCCCCTGCCAGAAGACCACTCCCTaGAGCGCTGTGGACATGATC | + |
|
Preference number: 4 (lower is better) Translates to: LVPLLCLWTAVTQAWAPCQKTTP*SAVDMI Trigger: GATCATGTCCACAGCGCTGCAGGGAGTGGTCTTCTG...GCAGGGGGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | ACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACATATTGCTGCTGCTGCTaGTGCCTGCCTCTGAGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: TPSPHPLVPLLCLWTAVTYCCCC*CLPLSR Trigger: ACGACTCAGAGGCAGGCAGCAGCAGCAGCAGCAATA...TGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | GACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACATGTCATATTGCTGCTaGTGCTGCTGCCTGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DPQPSPLSPSAVPLDSSYMSYCC*CCCLPL Trigger: CAGAGGCAGGCAGCAGCAGCAGCAGCAATATGACAT...GTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCCCCATGTCATATTGCTaGTGCTGCTGCTGCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QPSPLSPSAVPLDSSYTGPMSYC*CCCCLP Trigger: AGGCAGGCAGCAGCAGCAGCAGCAATATGACATGGG...GCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | GACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACTTGCCCATGTCATATTaGTGCTGCTGCTGCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DPQPSPLSPSAVPLDSSYLPMSY*CCCCCL Trigger: CAGGCAGCAGCAGCAGCAGCAATATGACATGGGCAA...GTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | GAGAGGACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAAAGCCAGAGCCCTTCTaGAGCATCCTCTCTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ERTPSPHPLVPLLCLWTAKPEPF*SILSFL Trigger: CAAGAAAGAGAGGATGCTGCAGAAGGGCTCTGGCTT...TGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTCCTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | ACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACAAAGGCAGTGAACAGGTaGATCCGCATGGTCCGAACC | + |
|
Preference number: 4 (lower is better) Translates to: TPSPHPLVPLLCLWTAVTKAVNR*IRMVRT Trigger: GGTTCGGACCATGCGGATGCACCTGTTCACTGCCTT...TGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | TTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCCCCTGCAAGGCAGTGAACAGGTaGATCCGCATGGTCCGAACC | + |
|
Preference number: 4 (lower is better) Translates to: LVPLLCLWTAVTQAWAPCKAVNR*IRMVRT Trigger: GGTTCGGACCATGCGGATGCACCTGTTCACTGCCTT...GCAGGGGGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAAAGGCAGTGAACAGGTaGATCCGCATGGTCCGAACC | + |
|
Preference number: 4 (lower is better) Translates to: PQPSPLSPSAVPLDSSYTKAVNR*IRMVRT Trigger: GGTTCGGACCATGCGGATGCACCTGTTCACTGCCTT...TGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | GAGAGGACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCATCCTCTGCCTTGATCTaGTCAGAGATGACCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ERTPSPHPLVPLLCLWTASSALI*SEMTIC Trigger: GCAGATGGTCATCTCTGACCAGATCAAGGCAGAGGA...TGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTCCTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCCCCATCTGGCGTTGGAAATaGGCAACAGAACGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PLVPLLCLWTAVTQAWAPIWRWK*ATERSS Trigger: GCTGCTGCGTTCTGTTGCCCATTTCCAACGCCAGAT...GGGGGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGCTGCCTCTGAGTCGTTaGAGCCTGAGCAGCCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSPLSPSAVPLDSSYTGMLPLSR*SLSSHG Trigger: TCCATGGCTGCTCAGGCTCCAACGACTCAGAGGCAG...CATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGAGCAACAGGTCGAGATaGAAGCCAGAGCCCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PSPHPLVPLLCLWTAVTQSNRSR*KPEPFC Trigger: GCAGAAGGGCTCTGGCTTCCATCTCGACCTGTTGCT...CTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | ACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACAGTGAGTGCATTGGCATaGGTGACAGAGCGGACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TPSPHPLVPLLCLWTAVTVSALA*VTERTV Trigger: CACTGTCCGCTCTGTCACCCATGCCAATGCACTCAC...TGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR TCA 90 bp | ACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACAGCTGTGGCCAGTGTCTaGGCCTCACTTTCATCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: TPSPHPLVPLLCLWTAVTAVASV*ASLSSV Trigger: TACTGATGAAAGTGAGGCTCAGACACTGGCCACAGC...TGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR TCA 90 bp | CAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCGCTGTGGCCAGTGTCTaGGCCTCACTTTCATCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QPSPLSPSAVPLDSSYTGAVASV*ASLSSV Trigger: TACTGATGAAAGTGAGGCTCAGACACTGGCCACAGC...GCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR TCA 90 bp | CACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCGCTGTGGCCAGTGTCTaGGCCTCACTTTCATCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: HPLVPLLCLWTAVTQAWAAVASV*ASLSSV Trigger: TACTGATGAAAGTGAGGCTCAGACACTGGCCACAGC...GGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR TCA 90 bp | CCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGATTGCTTGTCAGACATaGGGGTGGAAATGGAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSPHPLVPLLCLWTAVTQIACQT*GWKWSG Trigger: GCCGCTCCATTTCCACCCTCATGTCTGACAAGCAAT...CTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR TCA 90 bp | GACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACGGACATGATCAGCTCTaGCACTCCTATCAGGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DPQPSPLSPSAVPLDSSYGHDQL*HSYQVL Trigger: AAGGACCTGATAGGAGTGTCAGAGCTGATCATGTCC...GTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR TCA 90 bp | CCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCAGCGCTGTGGACATaGTCAGCTCTGACACTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: PHPLVPLLCLWTAVTQAWAALWT*SALTLL Trigger: TAGGAGTGTCAGAGCTGATCATGTCCACAGCGCTGC...CCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR TCA 90 bp | GAGAGGACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCATGTTCCTTGACTTCCTaGATCTTGGGTTTGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ERTPSPHPLVPLLCLWTACSLTS*ILGLSP Trigger: TGGGGACAAACCCAAGATTCAGGAAGTCAAGGAACA...TGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTCCTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCCCACCCCTGTCATACTaGCAATTCGTCTTCGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HPLVPLLCLWTAVTQAWAPPLSY*QFVFAP Trigger: AGGAGCGAAGACGAATTGGCAGTATGACAGGGGTGG...GGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCAGCAGCTTCAGCTCATaGTTGGACTTGGAGCGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: HPLVPLLCLWTAVTQAWASSFSS*LDLERV Trigger: TACCCGCTCCAAGTCCAAGCATGAGCTGAAGCTGCT...GGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCGCCACCTCTACCATCTaGAGGAGTGCCTTATCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QPSPLSPSAVPLDSSYTGATSTI*RSALSW Trigger: CCAAGATAAGGCACTCCTGCAGATGGTAGAGGTGGC...GCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCGGGATCATCTTCAGCTaGACCTGCCACCTCTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: QPSPLSPSAVPLDSSYTGGIIFS*TCHLYH Trigger: ATGGTAGAGGTGGCAGGTGCAGCTGAAGATGATCCC...GCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGCAGAAGACCACTCCCTaGAGCGCTGTGGACATGATC | + |
|
Preference number: 4 (lower is better) Translates to: PHPLVPLLCLWTAVTQAWQKTTP*SAVDMI Trigger: GATCATGTCCACAGCGCTGCAGGGAGTGGTCTTCTG...CCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | GAGAGGACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCACCAACTCATTGCTACTaGAGAACGAGAAGAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ERTPSPHPLVPLLCLWTAPTHCY*RTRRRP Trigger: AGGCCTTCTTCTCGTTCTGCAGTAGCAATGAGTTGG...TGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTCCTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCCAGCCATGGAGTGGGTaGTCCTGGAAGATCTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: HPLVPLLCLWTAVTQAWAQPWSG*SWKILI Trigger: GATCAAGATCTTCCAGGAGCACCCACTCCATGGCTG...GGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | ACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGCCATGGAGTGGGTaGTCCTGGAAGATCTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: TPSPHPLVPLLCLWTAVTQPWSG*SWKILI Trigger: GATCAAGATCTTCCAGGAGCACCCACTCCATGGCTG...TGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGCAGCCATGGAGTGGGTaGTCCTGGAAGATCTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: PSPHPLVPLLCLWTAVTQQPWSG*SWKILI Trigger: GATCAAGATCTTCCAGGAGCACCCACTCCATGGCTG...CTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGTATTGCTGCTGCTGCTaGTGCCTGCCTCTGAGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PHPLVPLLCLWTAVTQAWYCCCC*CLPLSR Trigger: ACGACTCAGAGGCAGGCAGCAGCAGCAGCAGCAATA...CCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAATGTCATATTGCTGCTaGTGCTGCTGCCTGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PQPSPLSPSAVPLDSSYTMSYCC*CCCLPL Trigger: CAGAGGCAGGCAGCAGCAGCAGCAGCAATATGACAT...TGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGTCATATTGCTGCTaGTGCTGCTGCCTGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QPSPLSPSAVPLDSSYTGMSYCC*CCCLPL Trigger: CAGAGGCAGGCAGCAGCAGCAGCAGCAATATGACAT...GCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGCCCATGTCATATTGCTaGTGCTGCTGCTGCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PSPLSPSAVPLDSSYTGMPMSYC*CCCCLP Trigger: AGGCAGGCAGCAGCAGCAGCAGCAATATGACATGGG...CATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGCCCATGTCATATTGCTaGTGCTGCTGCTGCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PHPLVPLLCLWTAVTQAWPMSYC*CCCCLP Trigger: AGGCAGGCAGCAGCAGCAGCAGCAATATGACATGGG...CCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCCCCAAGCCAGAGCCCTTCTaGAGCATCCTCTCTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PLVPLLCLWTAVTQAWAPKPEPF*SILSFL Trigger: CAAGAAAGAGAGGATGCTGCAGAAGGGCTCTGGCTT...GGGGGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | ACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACAAGGAGATGGTTGTTGTaGGGGAGCTCTGAACCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TPSPHPLVPLLCLWTAVTRRWLL*GSSEPF Trigger: GAAGGGTTCAGAGCTCCCCCACAACAACCATCTCCT...TGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCTTCTCGTCACTTGGGTaGCTGTGCTTTAGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QPSPLSPSAVPLDSSYTGFSSLG*LCFSRR Trigger: CCTCCTGCTAAAGCACAGCCACCCAAGTGACGAGAA...GCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATCTGGCGTTGGAAATaGGCAACAGAACGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QPSPLSPSAVPLDSSYTGIWRWK*ATERSS Trigger: GCTGCTGCGTTCTGTTGCCCATTTCCAACGCCAGAT...GCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCATCTGGCGTTGGAAATaGGCAACAGAACGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HPLVPLLCLWTAVTQAWAIWRWK*ATERSS Trigger: GCTGCTGCGTTCTGTTGCCCATTTCCAACGCCAGAT...GGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACATCACTGAGAATCCGCTaGGCACACTCAGTTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PQPSPLSPSAVPLDSSYTSLRIR*AHSVSG Trigger: CCCAGAAACTGAGTGTGCCCAGCGGATTCTCAGTGA...TGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCTCACTGAGAATCCGCTaGGCACACTCAGTTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QPSPLSPSAVPLDSSYTGSLRIR*AHSVSG Trigger: CCCAGAAACTGAGTGTGCCCAGCGGATTCTCAGTGA...GCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | ACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACATCACTGAGAATCCGCTaGGCACACTCAGTTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TPSPHPLVPLLCLWTAVTSLRIR*AHSVSG Trigger: CCCAGAAACTGAGTGTGCCCAGCGGATTCTCAGTGA...TGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGAGCAACAGGTCGAGATaGAAGCCAGAGCCCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PHPLVPLLCLWTAVTQAWSNRSR*KPEPFC Trigger: GCAGAAGGGCTCTGGCTTCCATCTCGACCTGTTGCT...CCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGACATAGGTGACATCTaGGTGGTGTTTGGGCGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PSPHPLVPLLCLWTAVTQDIGDI*VVFGRH Trigger: ATGCCGCCCAAACACCACCCAGATGTCACCTATGTC...CTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | TTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCCCCTGCGACATAGGTGACATCTaGGTGGTGTTTGGGCGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LVPLLCLWTAVTQAWAPCDIGDI*VVFGRH Trigger: ATGCCGCCCAAACACCACCCAGATGTCACCTATGTC...GCAGGGGGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCGACATAGGTGACATCTaGGTGGTGTTTGGGCGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HPLVPLLCLWTAVTQAWADIGDI*VVFGRH Trigger: ATGCCGCCCAAACACCACCCAGATGTCACCTATGTC...GGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR TCA 90 bp | CCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGATTGCTTGTCAGACATaGGGGTGGAAATGGAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSPLSPSAVPLDSSYTGMIACQT*GWKWSG Trigger: GCCGCTCCATTTCCACCCTCATGTCTGACAAGCAAT...CATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR TCA 90 bp | CACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCGGACATGATCAGCTCTaGCACTCCTATCAGGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HPLVPLLCLWTAVTQAWAGHDQL*HSYQVL Trigger: AAGGACCTGATAGGAGTGTCAGAGCTGATCATGTCC...GGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR TCA 90 bp | CCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGACATGATCAGCTCTaGCACTCCTATCAGGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PQPSPLSPSAVPLDSSYTGHDQL*HSYQVL Trigger: AAGGACCTGATAGGAGTGTCAGAGCTGATCATGTCC...TGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGCTCTGGCTTCCTTTCTaGACCTTCATCCTCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PSPHPLVPLLCLWTAVTQLWLPF*TFILLE Trigger: CTCCAAGAGGATGAAGGTGCAGAAAGGAAGCCAGAG...CTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGCCACCCCTGTCATACTaGCAATTCGTCTTCGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PSPLSPSAVPLDSSYTGMPPLSY*QFVFAP Trigger: AGGAGCGAAGACGAATTGGCAGTATGACAGGGGTGG...CATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGCCACCTCTACCATCTaGAGGAGTGCCTTATCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PSPLSPSAVPLDSSYTGMATSTI*RSALSW Trigger: CCAAGATAAGGCACTCCTGCAGATGGTAGAGGTGGC...CATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGTTGCCCATGTCATATTaGTGCTGCTGCTGCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSPLSPSAVPLDSSYTGMLPMSY*CCCCCL Trigger: CAGGCAGCAGCAGCAGCAGCAATATGACATGGGCAA...CATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGTTGCCCATGTCATATTaGTGCTGCTGCTGCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PHPLVPLLCLWTAVTQAWLPMSY*CCCCCL Trigger: CAGGCAGCAGCAGCAGCAGCAATATGACATGGGCAA...CCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCAAGCCAGAGCCCTTCTaGAGCATCCTCTCTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HPLVPLLCLWTAVTQAWAKPEPF*SILSFL Trigger: CAAGAAAGAGAGGATGCTGCAGAAGGGCTCTGGCTT...GGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | GACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACATATGGTGGGAGGACTaGCGGTGGTATTCAAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DPQPSPLSPSAVPLDSSYIWWED*RWYSKS Trigger: AGACTTTGAATACCACCGCCAGTCCTCCCACCATAT...GTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGAGGAGATGGTTGTTGTaGGGGAGCTCTGAACCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PHPLVPLLCLWTAVTQAWRRWLL*GSSEPF Trigger: GAAGGGTTCAGAGCTCCCCCACAACAACCATCTCCT...CCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACATCCTCTGCCTTGATCTaGTCAGAGATGACCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PQPSPLSPSAVPLDSSYTSSALI*SEMTIC Trigger: GCAGATGGTCATCTCTGACCAGATCAAGGCAGAGGA...TGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | ACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACATCCTCTGCCTTGATCTaGTCAGAGATGACCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TPSPHPLVPLLCLWTAVTSSALI*SEMTIC Trigger: GCAGATGGTCATCTCTGACCAGATCAAGGCAGAGGA...TGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGTTCTCGTCACTTGGGTaGCTGTGCTTTAGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSPLSPSAVPLDSSYTGMFSSLG*LCFSRR Trigger: CCTCCTGCTAAAGCACAGCCACCCAAGTGACGAGAA...CATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | GAGAGGACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAAAGGCAAAGATCTCCTaGGTGAATCGGGATACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ERTPSPHPLVPLLCLWTAKAKIS*VNRDTK Trigger: CTTTGTATCCCGATTCACCCAGGAGATCTTTGCCTT...TGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTCCTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCAGCGCTGCTGTTGTCTaGTACCAGTATGGTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QPSPLSPSAVPLDSSYTGSAAVV*YQYGCC Trigger: GCAACAACCATACTGGTACCAGACAACAGCAGCGCT...GCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAAGCGCTGCTGTTGTCTaGTACCAGTATGGTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PQPSPLSPSAVPLDSSYTSAAVV*YQYGCC Trigger: GCAACAACCATACTGGTACCAGACAACAGCAGCGCT...TGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR TCA 90 bp | GACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACTCTTGGAGAAAGAACTaGACTGCAGAGGGTGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: DPQPSPLSPSAVPLDSSYSWRKN*TAEGVV Trigger: TACTACACCCTCTGCAGTTCAGTTCTTTCTCCAAGA...GTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR TCA 90 bp | CACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCTGTTCCTTGACTTCCTaGATCTTGGGTTTGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HPLVPLLCLWTAVTQAWACSLTS*ILGLSP Trigger: TGGGGACAAACCCAAGATTCAGGAAGTCAAGGAACA...GGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCGAGAAAGAACTGAACTaGAGAGGGTGTAGTAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QPSPLSPSAVPLDSSYTGEKELN*RGCSSR Trigger: CCTGCTACTACACCCTCTGCAGTTCAGTTCTTTCTC...GCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGCTCTGGCTTCCTTTCTaGACCTTCATCCTCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PSPLSPSAVPLDSSYTGMLWLPF*TFILLE Trigger: CTCCAAGAGGATGAAGGTGCAGAAAGGAAGCCAGAG...CATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCCCCATTGGCTCTATCCTCTaGCTTGATCTGGTCAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PLVPLLCLWTAVTQAWAPIGSIL*LDLVRD Trigger: ATCTCTGACCAGATCAAGGCAGAGGATAGAGCCAAT...GGGGGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGCCAACTCATTGCTACTaGAGAACGAGAAGAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PSPHPLVPLLCLWTAVTQPTHCY*RTRRRP Trigger: AGGCCTTCTTCTCGTTCTGCAGTAGCAATGAGTTGG...CTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | ACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACCATGTACAAGAAAATaGCAAAGAGCACAGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TPSPHPLVPLLCLWTAVTPCTRK*QRAQPG Trigger: CCCTGGCTGTGCTCTTTGGCATTTTCTTGTACATGG...TGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACACCATGTACAAGAAAATaGCAAAGAGCACAGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PQPSPLSPSAVPLDSSYTPCTRK*QRAQPG Trigger: CCCTGGCTGTGCTCTTTGGCATTTTCTTGTACATGG...TGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | TTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCCCCTGCCCATGTACAAGAAAATaGCAAAGAGCACAGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LVPLLCLWTAVTQAWAPCPCTRK*QRAQPG Trigger: CCCTGGCTGTGCTCTTTGGCATTTTCTTGTACATGG...GCAGGGGGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACATTTAGCATCTGGCGTTaGAAATGGGCAACAGAACGC | + |
|
Preference number: 4 (lower is better) Translates to: PQPSPLSPSAVPLDSSYTFSIWR*KWATER Trigger: GCGTTCTGTTGCCCATTTCCAACGCCAGATGCTAAA...TGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | GACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACAAGGCAAAGATCTCCTaGGTGAATCGGGATACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: DPQPSPLSPSAVPLDSSYKAKIS*VNRDTK Trigger: CTTTGTATCCCGATTCACCCAGGAGATCTTTGCCTT...GTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGAGCGCTGCTGTTGTCTaGTACCAGTATGGTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PSPLSPSAVPLDSSYTGMSAAVV*YQYGCC Trigger: GCAACAACCATACTGGTACCAGACAACAGCAGCGCT...CATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAACACTCGTCAAACACTaGCTCTGCCTCATTAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: PQPSPLSPSAVPLDSSYTTLVKH*LCLISI Trigger: GATGCTAATGAGGCAGAGCCAGTGTTTGACGAGTGT...TGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR TCA 90 bp | CCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGTCTTGGAGAAAGAACTaGACTGCAGAGGGTGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PSPHPLVPLLCLWTAVTQSWRKN*TAEGVV Trigger: TACTACACCCTCTGCAGTTCAGTTCTTTCTCCAAGA...CTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR TCA 90 bp | CCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGTGTTCCTTGACTTCCTaGATCTTGGGTTTGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PHPLVPLLCLWTAVTQAWCSLTS*ILGLSP Trigger: TGGGGACAAACCCAAGATTCAGGAAGTCAAGGAACA...CCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGAGAAAGAACTGAACTaGAGAGGGTGTAGTAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSPLSPSAVPLDSSYTGMEKELN*RGCSSR Trigger: CCTGCTACTACACCCTCTGCAGTTCAGTTCTTTCTC...CATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGAGAAAGAACTGAACTaGAGAGGGTGTAGTAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PHPLVPLLCLWTAVTQAWEKELN*RGCSSR Trigger: CCTGCTACTACACCCTCTGCAGTTCAGTTCTTTCTC...CCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGATTGGCTCTATCCTCTaGCTTGATCTGGTCAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PSPHPLVPLLCLWTAVTQIGSIL*LDLVRD Trigger: ATCTCTGACCAGATCAAGGCAGAGGATAGAGCCAAT...CTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR GCA 90 bp | CCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAATTGGCTCTATCCTCTaGCTTGATCTGGTCAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PQPSPLSPSAVPLDSSYTIGSIL*LDLVRD Trigger: ATCTCTGACCAGATCAAGGCAGAGGATAGAGCCAAT...TGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR GCA 90 bp | CCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGCCAACTCATTGCTACTaGAGAACGAGAAGAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PHPLVPLLCLWTAVTQAWPTHCY*RTRRRP Trigger: AGGCCTTCTTCTCGTTCTGCAGTAGCAATGAGTTGG...CCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR CCA 90 bp | CCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGATATGGTGGGAGGACTaGCGGTGGTATTCAAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PHPLVPLLCLWTAVTQAWIWWED*RWYSKS Trigger: AGACTTTGAATACCACCGCCAGTCCTCCCACCATAT...CCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGTTTAGCATCTGGCGTTaGAAATGGGCAACAGAACGC | + |
|
Preference number: 4 (lower is better) Translates to: PSPLSPSAVPLDSSYTGMFSIWR*KWATER Trigger: GCGTTCTGTTGCCCATTTCCAACGCCAGATGCTAAA...CATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR CCA 90 bp | CCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGTTTAGCATCTGGCGTTaGAAATGGGCAACAGAACGC | + |
|
Preference number: 4 (lower is better) Translates to: PHPLVPLLCLWTAVTQAWFSIWR*KWATER Trigger: GCGTTCTGTTGCCCATTTCCAACGCCAGATGCTAAA...CCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCAAGGCAAAGATCTCCTaGGTGAATCGGGATACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QPSPLSPSAVPLDSSYTGKAKIS*VNRDTK Trigger: CTTTGTATCCCGATTCACCCAGGAGATCTTTGCCTT...GCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGACACTCGTCAAACACTaGCTCTGCCTCATTAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: PHPLVPLLCLWTAVTQAWTLVKH*LCLISI Trigger: GATGCTAATGAGGCAGAGCCAGTGTTTGACGAGTGT...CCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CCA 90 bp | CCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGACACTCGTCAAACACTaGCTCTGCCTCATTAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: PSPLSPSAVPLDSSYTGMTLVKH*LCLISI Trigger: GATGCTAATGAGGCAGAGCCAGTGTTTGACGAGTGT...CATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS CCA 90 bp | GTGGGAGAGGCACCAGGGCGCCTCCGAGGTTTCCGTCCTGGGCCCTaGGGAGTCTTGCGACGGCGGGCATCAGGAGGCAGGTGGGTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: VGEAPGRLRGFRPGP*GVLRRRASGGRWVD Trigger: ATCCACCCACCTGCCTCCTGATGCCCGCCGTCGCAAGACTCCCCAGGGCCCAGGACGGAAACCTCGGAGGCGCCCTGGTGCCTCTCCCAC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 ENSMUST00000141966.8 ENSMUST00000155598.8 |
||
| CDS CCA 90 bp | CTCTCCAGTGGGAGAGGCACCAGGGCGCCTCCGAGGTTTCCGTCCTaGGCCCTGGGGAGTCTTGCGACGGCGGGCATCAGGAGGCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSSGRGTRAPPRFPS*ALGSLATAGIRRQV Trigger: CACCTGCCTCCTGATGCCCGCCGTCGCAAGACTCCCCAGGGCCCAGGACGGAAACCTCGGAGGCGCCCTGGTGCCTCTCCCACTGGAGAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 ENSMUST00000141966.8 ENSMUST00000155598.8 |
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| CDS GCA 90 bp | GCCACTGGCCACCGCCACCATCTCCTCCACCAGAGTTCCTGTCTGTaGCCCTTTGCTGGCCCGGGGAGCTGCCTCCTGGTGGGGCGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ATGHRHHLLHQSSCL*PFAGPGSCLLVGRL Trigger: CAGACGCCCCACCAGGAGGCAGCTCCCCGGGCCAGCAAAGGGGCACAGACAGGAACTCTGGTGGAGGAGATGGTGGCGGTGGCCAGTGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | GAGAGGACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGGGCCCTGGGGAGTCTaGCGACGGCGGGCATCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ERTPSPHPLVPLLCLWTAGPWGV*RRRASG Trigger: TCCTGATGCCCGCCGTCGCAAGACTCCCCAGGGCCC...TGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTCCTCTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | CCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGGCCCTGGGGAGTCTaGCGACGGCGGGCATCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PQPSPLSPSAVPLDSSYTGPWGV*RRRASG Trigger: TCCTGATGCCCGCCGTCGCAAGACTCCCCAGGGCCC...TGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | CACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCGGGCCCTGGGGAGTCTaGCGACGGCGGGCATCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: HPLVPLLCLWTAVTQAWAGPWGV*RRRASG Trigger: TCCTGATGCCCGCCGTCGCAAGACTCCCCAGGGCCC...GGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS CCA 90 bp | CCTGGGGGCAGCAGGCGGCCCTGCTCCTCTCGCTTCTTTAGCATCTaGCGTTGGAAATGGGCAACAGAACGCAGCAGCTCCTCGCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PGGSRRPCSSRFFSI*RWKWATERSSSSPC Trigger: GCAGGGCGAGGAGCTGCTGCGTTCTGTTGCCCATTTCCAACGCCAGATGCTAAAGAAGCGAGAGGAGCAGGGCCGCCTGCTGCCCCCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | CCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGTGTCCAGGCTGGGCTTaGGTCAAGGGACGCCCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: PSPHPLVPLLCLWTAVTQCPGWA*VKGRPA Trigger: TGCGGGGCGTCCCTTGACCAAAGCCCAGCCTGGACA...CTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | TTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCCCCTGCTGTCCAGGCTGGGCTTaGGTCAAGGGACGCCCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: LVPLLCLWTAVTQAWAPCCPGWA*VKGRPA Trigger: TGCGGGGCGTCCCTTGACCAAAGCCCAGCCTGGACA...GCAGGGGGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | GACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACCCTGCCTCTGAGTCGTaGGAGCCTGAGCAGCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: DPQPSPLSPSAVPLDSSYPASES*EPEQPW Trigger: CCATGGCTGCTCAGGCTCCAACGACTCAGAGGCAGG...GTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | CCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGTGTCCAGGCTGGGCTTaGGTCAAGGGACGCCCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: PHPLVPLLCLWTAVTQAWCPGWA*VKGRPA Trigger: TGCGGGGCGTCCCTTGACCAAAGCCCAGCCTGGACA...CCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | CCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACACCTGCCTCTGAGTCGTaGGAGCCTGAGCAGCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: PQPSPLSPSAVPLDSSYTPASES*EPEQPW Trigger: CCATGGCTGCTCAGGCTCCAACGACTCAGAGGCAGG...TGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | ACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACAGATAGCAAAGCTGTGTaGGGCTGGCCCCGGGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TPSPHPLVPLLCLWTAVTDSKAV*GWPRGF Trigger: GAAGCCCCGGGGCCAGCCCAACACAGCTTTGCTATC...TGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | CAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCGATAGCAAAGCTGTGTaGGGCTGGCCCCGGGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QPSPLSPSAVPLDSSYTGDSKAV*GWPRGF Trigger: GAAGCCCCGGGGCCAGCCCAACACAGCTTTGCTATC...GCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | CACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCGATAGCAAAGCTGTGTaGGGCTGGCCCCGGGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HPLVPLLCLWTAVTQAWADSKAV*GWPRGF Trigger: GAAGCCCCGGGGCCAGCCCAACACAGCTTTGCTATC...GGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS TCA 90 bp | GGCCCACAAGCAGGGCCACCAGCAGCCCTGTCACACGCTGTTCCTTaGCTTCCTGAATCTTGGGTTTGTCCCCAGGTGCCACAGCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GPQAGPPAALSHAVP*LPESWVCPQVPQPC Trigger: GCAAGGCTGTGGCACCTGGGGACAAACCCAAGATTCAGGAAGTCAAGGAACAGCGTGTGACAGGGCTGCTGGTGGCCCTGCTTGTGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS GCA 90 bp | TCTGCTGATCGAGGTCTAAGAGCACAGCTCCATGGGCCAGAGTCCTaGGGAGCTCCAGGAGGCTGCGGAAGGACAGTGAGGCCACATGAG | + |
|
Preference number: 5 (lower is better) Translates to: SADRGLRAQLHGPES*GAPGGCGRTVRPHE Trigger: CTCATGTGGCCTCACTGTCCTTCCGCAGCCTCCTGGAGCTCCGCAGGACTCTGGCCCATGGAGCTGTGCTCTTAGACCTCGATCAGCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS GCA 90 bp | ACCAGCGATAGCAAAGCTGTGTTGGGCTGGCCCCGGGGCTTCTCCTaGCCAGACTGCCCAGAAGCGCTGCTGTTGTCTGGTACCAGTATG | + |
|
Preference number: 5 (lower is better) Translates to: TSDSKAVLGWPRGFS*PDCPEALLLSGTSM Trigger: CATACTGGTACCAGACAACAGCAGCGCTTCTGGGCAGTCTGGGCAGGAGAAGCCCCGGGGCCAGCCCAACACAGCTTTGCTATCGCTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS CCA 90 bp | GTCTTCGCTCCTGAAGGTTGTAACTTCGATGTCCAGGCTGGGCTTTaGTCAAGGGACGCCCCGCAGCACCTCCGTCGTCACCTCCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VFAPEGCNFDVQAGL*SRDAPQHLRRHLQL Trigger: CAGCTGGAGGTGACGACGGAGGTGCTGCGGGGCGTCCCTTGACCAAAGCCCAGCCTGGACATCGAAGTTACAACCTTCAGGAGCGAAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS CCA 90 bp | GGCAGCAGGCGGCCCTGCTCCTCTCGCTTCTTTAGCATCTGGCGTTaGAAATGGGCAACAGAACGCAGCAGCTCCTCGCCCTGCACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GSRRPCSSRFFSIWR*KWATERSSSSPCTS Trigger: TGAAGTGCAGGGCGAGGAGCTGCTGCGTTCTGTTGCCCATTTCCAACGCCAGATGCTAAAGAAGCGAGAGGAGCAGGGCCGCCTGCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | GACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACTTATCTTGGGCAGACTaGGGCTCTAGCCCAGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: DPQPSPLSPSAVPLDSSYLSWAD*GSSPAP Trigger: AGGGGCTGGGCTAGAGCCCAAGTCTGCCCAAGATAA...GTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | CCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGCCTGCCTCTGAGTCGTaGGAGCCTGAGCAGCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: PSPLSPSAVPLDSSYTGMPASES*EPEQPW Trigger: CCATGGCTGCTCAGGCTCCAACGACTCAGAGGCAGG...CATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | GAGAGGACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTGCCCATGTCATATaGCTGCTGCTGCTGCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ERTPSPHPLVPLLCLWTAVAHVI*LLLLLP Trigger: AGGCAGCAGCAGCAGCAGCAATATGACATGGGCAAC...TGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTCCTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | CCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGACATCTGGGTGGTGTTaGGGCGGCATGAGCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PSPHPLVPLLCLWTAVTQTSGWC*GGMSSR Trigger: CCTGCTGCTCATGCCGCCCAAACACCACCCAGATGT...CTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | CCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAACATCTGGGTGGTGTTaGGGCGGCATGAGCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PQPSPLSPSAVPLDSSYTTSGWC*GGMSSR Trigger: CCTGCTGCTCATGCCGCCCAAACACCACCCAGATGT...TGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS GCA 90 bp | TGGGCTGGCCCCGGGGCTTCTCCTGCCCAGACTGCCCAGAAGCGCTaGTGTTGTCTGGTACCAGTATGGTTGTTGCCCATGTCATATTGC | + |
|
Preference number: 5 (lower is better) Translates to: WAGPGASPAQTAQKR*CCLVPVWLLPMSYC Trigger: GCAATATGACATGGGCAACAACCATACTGGTACCAGACAACAGCAGCGCTTCTGGGCAGTCTGGGCAGGAGAAGCCCCGGGGCCAGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS CCA 90 bp | AGGCGGCCCTGCTCCTCTCGCTTCTTTAGCATCTGGCGTTGGAAATaGGCAACAGAACGCAGCAGCTCCTCGCCCTGCACTTCAGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RRPCSSRFFSIWRWK*ATERSSSSPCTSEG Trigger: GCCTTCTGAAGTGCAGGGCGAGGAGCTGCTGCGTTCTGTTGCCCATTTCCAACGCCAGATGCTAAAGAAGCGAGAGGAGCAGGGCCGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | GAGAGGACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGCTCTATCCTCTGCCTaGATCTGGTCAGAGATGACC | + |
|
Preference number: 5 (lower is better) Translates to: ERTPSPHPLVPLLCLWTAALSSA*IWSEMT Trigger: GGTCATCTCTGACCAGATCAAGGCAGAGGATAGAGC...TGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTCCTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | CAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCAGGGCCCGTAGCACATaGGCTCTATCCTCTGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QPSPLSPSAVPLDSSYTGRARST*ALSSAL Trigger: CAAGGCAGAGGATAGAGCCAATGTGCTACGGGCCCT...GCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | TTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCCCCTGCTTATCTTGGGCAGACTaGGGCTCTAGCCCAGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LVPLLCLWTAVTQAWAPCLSWAD*GSSPAP Trigger: AGGGGCTGGGCTAGAGCCCAAGTCTGCCCAAGATAA...GCAGGGGGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | CAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCTTATCTTGGGCAGACTaGGGCTCTAGCCCAGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: QPSPLSPSAVPLDSSYTGLSWAD*GSSPAP Trigger: AGGGGCTGGGCTAGAGCCCAAGTCTGCCCAAGATAA...GCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS GCA 90 bp | TCCTCGAACCGCTCCACACCTAAGGTACGAAGTTCATCTTCCTCTTaGTCGGGGAACCCAGGTGTTCCGGGGCTCAGGCTCTCTGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSNRSTPKVRSSSSS*SGNPGVPGLRLSGS Trigger: AGAGCCAGAGAGCCTGAGCCCCGGAACACCTGGGTTCCCCGAGCAAGAGGAAGATGAACTTCGTACCTTAGGTGTGGAGCGGTTCGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 ENSMUST00000141966.8 ENSMUST00000155598.8 |
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| CDS CCA 90 bp | GGACTGGCGGTGGTATTCAAAGTCTTCCTCTCCATAGCTTCGTCCTaGCTCTTCTCCTCCCCGGGATCCAGCCTCCTGGAGGATCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GLAVVFKVFLSIASS*LFSSPGSSLLEDLL Trigger: GAGGAGATCCTCCAGGAGGCTGGATCCCGGGGAGGAGAAGAGCCAGGACGAAGCTATGGAGAGGAAGACTTTGAATACCACCGCCAGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 ENSMUST00000141966.8 ENSMUST00000155598.8 |
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| CDS-3UTR CAA 90 bp | GACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACAAGTTCATCTTCCTCTaGCTCGGGGAACCCAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: DPQPSPLSPSAVPLDSSYKFIFL*LGEPRC Trigger: ACACCTGGGTTCCCCGAGCAAGAGGAAGATGAACTT...GTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR CAA 90 bp | CCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCCCCAAGTTCATCTTCCTCTaGCTCGGGGAACCCAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: PLVPLLCLWTAVTQAWAPKFIFL*LGEPRC Trigger: ACACCTGGGTTCCCCGAGCAAGAGGAAGATGAACTT...GGGGGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR CAA 90 bp | CCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGAGGGCCCGTAGCACATaGGCTCTATCCTCTGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PHPLVPLLCLWTAVTQAWRARST*ALSSAL Trigger: CAAGGCAGAGGATAGAGCCAATGTGCTACGGGCCCT...CCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | ACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACTCCTATCAGGTCCTTaGTCTTCTCCCCCAGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TPSPHPLVPLLCLWTAVTLLSGP*SSPPVA Trigger: GGCTACTGGGGGAGAAGACAAAGGACCTGATAGGAG...TGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR CAA 90 bp | CCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACACTCCTATCAGGTCCTTaGTCTTCTCCCCCAGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PQPSPLSPSAVPLDSSYTLLSGP*SSPPVA Trigger: GGCTACTGGGGGAGAAGACAAAGGACCTGATAGGAG...TGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | TTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCCCCTGCCTCCTATCAGGTCCTTaGTCTTCTCCCCCAGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LVPLLCLWTAVTQAWAPCLLSGP*SSPPVA Trigger: GGCTACTGGGGGAGAAGACAAAGGACCTGATAGGAG...GCAGGGGGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS-3UTR CAA 90 bp | CCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGTTGCCCATGTCATATaGCTGCTGCTGCTGCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PQPSPLSPSAVPLDSSYTVAHVI*LLLLLP Trigger: AGGCAGCAGCAGCAGCAGCAATATGACATGGGCAAC...TGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS TCA 90 bp | AGCAGGGCCACCAGCAGCCCTGTCACACGCTGTTCCTTGACTTCCTaGATCTTGGGTTTGTCCCCAGGTGCCACAGCCTTGCTCATGACA | + |
|
Preference number: 5 (lower is better) Translates to: SRATSSPVTRCSLTS*ILGLSPGATALLMT Trigger: TGTCATGAGCAAGGCTGTGGCACCTGGGGACAAACCCAAGATTCAGGAAGTCAAGGAACAGCGTGTGACAGGGCTGCTGGTGGCCCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS GCA 90 bp | ATCTGGCGTTGGAAATGGGCAACAGAACGCAGCAGCTCCTCGCCCTaGACTTCAGAAGGCGGTAGCACAACACTGCAGTCCAGGAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: IWRWKWATERSSSSP*TSEGGSTTLQSRKA Trigger: TGCCTTCCTGGACTGCAGTGTTGTGCTACCGCCTTCTGAAGTGCAGGGCGAGGAGCTGCTGCGTTCTGTTGCCCATTTCCAACGCCAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS GCA 90 bp | AAAGGGCCGGCCTGTCCTCCGAAGGGGATCATCTTCAGCTGCACCTaGCACCTCTACCATCTGCAGGAGTGCCTTATCTTGGGCAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: KGPACPPKGIIFSCT*HLYHLQECLILGRL Trigger: AAGTCTGCCCAAGATAAGGCACTCCTGCAGATGGTAGAGGTGGCAGGTGCAGCTGAAGATGATCCCCTTCGGAGGACAGGCCGGCCCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS CCA 90 bp | CCTGCCCAGACTGCCCAGAAGCGCTGCTGTTGTCTGGTACCAGTATaGTTGTTGCCCATGTCATATTGCTGCTGCTGCTGCTGCCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PAQTAQKRCCCLVPV*LLPMSYCCCCCCLP Trigger: AGGCAGGCAGCAGCAGCAGCAGCAATATGACATGGGCAACAACCATACTGGTACCAGACAACAGCAGCGCTTCTGGGCAGTCTGGGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS CCA 90 bp | CCGGGGCTTCTCCTGCCCAGACTGCCCAGAAGCGCTGCTGTTGTCTaGTACCAGTATGGTTGTTGCCCATGTCATATTGCTGCTGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PGLLLPRLPRSAAVV*YQYGCCPCHIAAAA Trigger: AGCAGCAGCAGCAATATGACATGGGCAACAACCATACTGGTACCAGACAACAGCAGCGCTTCTGGGCAGTCTGGGCAGGAGAAGCCCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS CCA 90 bp | CAGGTGCATCCGCATGGTCCGAACCTTTTTGACATAGGTGACATCTaGGTGGTGTTTGGGCGGCATGAGCAGCAGGTGCAGCCGCTCGTA | + |
|
Preference number: 5 (lower is better) Translates to: QVHPHGPNLFDIGDI*VVFGRHEQQVQPLV Trigger: TACGAGCGGCTGCACCTGCTGCTCATGCCGCCCAAACACCACCCAGATGTCACCTATGTCAAAAAGGTTCGGACCATGCGGATGCACCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | GAGAGGACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCATGCACCTTCATCCTCTaGGAGAAAGAACTGAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: ERTPSPHPLVPLLCLWTACTFIL*EKELNC Trigger: GCAGTTCAGTTCTTTCTCCAAGAGGATGAAGGTGCA...TGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTCCTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | CCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGTTGCCCATGTCATATaGCTGCTGCTGCTGCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PSPLSPSAVPLDSSYTGMVAHVI*LLLLLP Trigger: AGGCAGCAGCAGCAGCAGCAATATGACATGGGCAAC...CATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | ACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACAGGCATGGGCATCTCGTaGTACTCATCCACACCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TPSPHPLVPLLCLWTAVTGMGIS*YSSTPS Trigger: TGAAGGTGTGGATGAGTACAACGAGATGCCCATGCC...TGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | CCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCATCTCGTaGTACTCATCCACACCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PQPSPLSPSAVPLDSSYTGMGIS*YSSTPS Trigger: TGAAGGTGTGGATGAGTACAACGAGATGCCCATGCC...TGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | CAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCGGCATGGGCATCTCGTaGTACTCATCCACACCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: QPSPLSPSAVPLDSSYTGGMGIS*YSSTPS Trigger: TGAAGGTGTGGATGAGTACAACGAGATGCCCATGCC...GCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS GCA 90 bp | GTACCAGTATGGTTGTTGCCCATGTCATATTGCTGCTGCTGCTGCTaGCTGCCTCTGAGTCGTTGGAGCCTGAGCAGCCATGGAGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VPVWLLPMSYCCCCC*LPLSRWSLSSHGVG Trigger: ACCCACTCCATGGCTGCTCAGGCTCCAACGACTCAGAGGCAGGCAGCAGCAGCAGCAGCAATATGACATGGGCAACAACCATACTGGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS GCA 90 bp | CTGGTACCAGTATGGTTGTTGCCCATGTCATATTGCTGCTGCTGCTaGTGCCTGCCTCTGAGTCGTTGGAGCCTGAGCAGCCATGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LVPVWLLPMSYCCCC*CLPLSRWSLSSHGV Trigger: CACTCCATGGCTGCTCAGGCTCCAACGACTCAGAGGCAGGCAGCAGCAGCAGCAGCAATATGACATGGGCAACAACCATACTGGTACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS GCA 90 bp | CGCTGCTGTTGTCTGGTACCAGTATGGTTGTTGCCCATGTCATATTaGTGCTGCTGCTGCTGCCTGCCTCTGAGTCGTTGGAGCCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RCCCLVPVWLLPMSY*CCCCCLPLSRWSLS Trigger: GCTCAGGCTCCAACGACTCAGAGGCAGGCAGCAGCAGCAGCAGCAATATGACATGGGCAACAACCATACTGGTACCAGACAACAGCAGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | CCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCCCCCTGCACCTTCATCCTCTaGGAGAAAGAACTGAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: PLVPLLCLWTAVTQAWAPCTFIL*EKELNC Trigger: GCAGTTCAGTTCTTTCTCCAAGAGGATGAAGGTGCA...GGGGGCCCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | CCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGGCTCTATCCTCTGCCTaGATCTGGTCAGAGATGACC | + |
|
Preference number: 5 (lower is better) Translates to: PHPLVPLLCLWTAVTQAWALSSA*IWSEMT Trigger: GGTCATCTCTGACCAGATCAAGGCAGAGGATAGAGC...CCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | CCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGCTCTATCCTCTGCCTaGATCTGGTCAGAGATGACC | + |
|
Preference number: 5 (lower is better) Translates to: PSPLSPSAVPLDSSYTGMALSSA*IWSEMT Trigger: GGTCATCTCTGACCAGATCAAGGCAGAGGATAGAGC...CATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | CAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCAGCTTCAGCTCATGCTaGGACTTGGAGCGGGTAATA | + |
|
Preference number: 5 (lower is better) Translates to: QPSPLSPSAVPLDSSYTGSFSSC*DLERVI Trigger: TATTACCCGCTCCAAGTCCAAGCATGAGCTGAAGCT...GCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | CCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGAGCTTCAGCTCATGCTaGGACTTGGAGCGGGTAATA | + |
|
Preference number: 5 (lower is better) Translates to: PSPHPLVPLLCLWTAVTQSFSSC*DLERVI Trigger: TATTACCCGCTCCAAGTCCAAGCATGAGCTGAAGCT...CTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | ACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACAAGCTTCAGCTCATGCTaGGACTTGGAGCGGGTAATA | + |
|
Preference number: 5 (lower is better) Translates to: TPSPHPLVPLLCLWTAVTSFSSC*DLERVI Trigger: TATTACCCGCTCCAAGTCCAAGCATGAGCTGAAGCT...TGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | GACCCCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACCTGGTACCAGTATGGTaGTTGCCCATGTCATATTGC | + |
|
Preference number: 5 (lower is better) Translates to: DPQPSPLSPSAVPLDSSYLVPVW*LPMSYC Trigger: GCAATATGACATGGGCAACAACCATACTGGTACCAG...GTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGGGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS GCA 90 bp | ATGTTTCGGGGGAAGGAGAACTCTTTCTCGTCACTTGGGTGGCTGTaGTTTAGCAGGAGGGCCCGTAGCACATTGGCTCTATCCTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: MFRGKENSFSSLGWL*FSRRARSTLALSSA Trigger: GGCAGAGGATAGAGCCAATGTGCTACGGGCCCTCCTGCTAAAGCACAGCCACCCAAGTGACGAGAAAGAGTTCTCCTTCCCCCGAAACAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS GCA 90 bp | TGCTGTTGTCTGGTACCAGTATGGTTGTTGCCCATGTCATATTGCTaGTGCTGCTGCTGCCTGCCTCTGAGTCGTTGGAGCCTGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CCCLVPVWLLPMSYC*CCCCLPLSRWSLSS Trigger: GCTGCTCAGGCTCCAACGACTCAGAGGCAGGCAGCAGCAGCAGCAGCAATATGACATGGGCAACAACCATACTGGTACCAGACAACAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS CCA 90 bp | GCTGAGATGTTTCGGGGGAAGGAGAACTCTTTCTCGTCACTTGGGTaGCTGTGCTTTAGCAGGAGGGCCCGTAGCACATTGGCTCTATCC | + |
|
Preference number: 5 (lower is better) Translates to: AEMFRGKENSFSSLG*LCFSRRARSTLALS Trigger: GGATAGAGCCAATGTGCTACGGGCCCTCCTGCTAAAGCACAGCCACCCAAGTGACGAGAAAGAGTTCTCCTTCCCCCGAAACATCTCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | CCCAGCCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGTGCACCTTCATCCTCTaGGAGAAAGAACTGAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: PSPHPLVPLLCLWTAVTQCTFIL*EKELNC Trigger: GCAGTTCAGTTCTTTCTCCAAGAGGATGAAGGTGCA...CTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGGCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS GCA 90 bp | TGTTGTCTGGTACCAGTATGGTTGTTGCCCATGTCATATTGCTGCTaGTGCTGCTGCCTGCCTCTGAGTCGTTGGAGCCTGAGCAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: CCLVPVWLLPMSYCC*CCCLPLSRWSLSSH Trigger: ATGGCTGCTCAGGCTCCAACGACTCAGAGGCAGGCAGCAGCAGCAGCAGCAATATGACATGGGCAACAACCATACTGGTACCAGACAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS CCA 90 bp | AGGGCACAGATGCCACCCATGGCTACAATGAGCAACAGGTCGAGATaGAAGCCAGAGCCCTTCTGCAGCATCCTCTCTTTCTTGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: RAQMPPMATMSNRSR*KPEPFCSILSFLEM Trigger: CATCTCCAAGAAAGAGAGGATGCTGCAGAAGGGCTCTGGCTTCCATCTCGACCTGTTGCTCATTGTAGCCATGGGTGGCATCTGTGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | CCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGGCTGGTACCAGTATGGTaGTTGCCCATGTCATATTGC | + |
|
Preference number: 5 (lower is better) Translates to: PHPLVPLLCLWTAVTQAWLVPVW*LPMSYC Trigger: GCAATATGACATGGGCAACAACCATACTGGTACCAG...CCATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS-3UTR CAA 90 bp | CCCTCACCCCTTAGTCCCTCTGCTGTGCCTCTGGACAGCAGTTACACAGGCATGCTGGTACCAGTATGGTaGTTGCCCATGTCATATTGC | + |
|
Preference number: 5 (lower is better) Translates to: PSPLSPSAVPLDSSYTGMLVPVW*LPMSYC Trigger: GCAATATGACATGGGCAACAACCATACTGGTACCAG...CATGCCTGTGTAACTGCTGTCCAGAGGCACAGCAGAGGGACTAAGGGGTGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS GCA 90 bp | CGTCTGTGTAGGGGGAGATGGGCTGGTTCTCTCTGGCTTCCTTTCTaGACCTTCATCCTCTTGGAGAAAGAACTGAACTGCAGAGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: RLCRGRWAGSLWLPF*TFILLEKELNCRGC Trigger: ACACCCTCTGCAGTTCAGTTCTTTCTCCAAGAGGATGAAGGTGCAGAAAGGAAGCCAGAGAGAACCAGCCCATCTCCCCCTACACAGACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS GCA 90 bp | ATGGCTACAATGAGCAACAGGTCGAGATGGAAGCCAGAGCCCTTCTaGAGCATCCTCTCTTTCTTGGAGATGATCAGCGTGGTGATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: MATMSNRSRWKPEPF*SILSFLEMISVVIC Trigger: ACAGATCACCACGCTGATCATCTCCAAGAAAGAGAGGATGCTGCAGAAGGGCTCTGGCTTCCATCTCGACCTGTTGCTCATTGTAGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS GCA 90 bp | CTCGTTGTACTCATCCACACCTTCACACTCGTCAAACACTGGCTCTaGCTCATTAGCATCCAGACATTTCATTTCTCGCTCAGTGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LVVLIHTFTLVKHWL*LISIQTFHFSLSED Trigger: ATCTTCACTGAGCGAGAAATGAAATGTCTGGATGCTAATGAGGCAGAGCCAGTGTTTGACGAGTGTGAAGGTGTGGATGAGTACAACGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS CCA 72 bp | GGGGCTTATGCGGGGCCCGTGGCCGTGCCCGAGGTGTaGGGCCAGGCTCTCGACCTTCCCGGGCAGCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: GAYAGPVAVPEV*GQALDLPGQPV Trigger: CACAGGCTGCCCGGGAAGGTCGAGAGCCTGGCCCCACACCTCGGGCACGGCCACGGGCCCCGCATAAGCCCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS CCA 72 bp | GCACCAGGGCGCCTCCGAGGTTTCCGTCCTGGGCCCTaGGGAGTCTTGCGACGGCGGGCATCAGGAGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: APGRLRGFRPGP*GVLRRRASGGR Trigger: CCTGCCTCCTGATGCCCGCCGTCGCAAGACTCCCCAGGGCCCAGGACGGAAACCTCGGAGGCGCCCTGGTGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 ENSMUST00000141966.8 ENSMUST00000155598.8 |
||
| CDS GCA 72 bp | GCTCAGGCTCTCTGGCTCTGGCGTGTGCAAAGAATCTaGGCCCGAGGCGGGGCGCCTGGGGGCGCTGCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: AQALWLWRVQRI*ARGGAPGGAAH Trigger: ATGAGCAGCGCCCCCAGGCGCCCCGCCTCGGGCGCAGATTCTTTGCACACGCCAGAGCCAGAGAGCCTGAGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000141966.8 ENSMUST00000155598.8 |
||
| CDS CAA 72 bp | CGCCTCCGAGGTTTCCGTCCTGGGCCCTGGGGAGTCTaGCGACGGCGGGCATCAGGAGGCAGGTGGGTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: RLRGFRPGPWGV*RRRASGGRWVD Trigger: ATCCACCCACCTGCCTCCTGATGCCCGCCGTCGCAAGACTCCCCAGGGCCCAGGACGGAAACCTCGGAGGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 ENSMUST00000141966.8 ENSMUST00000155598.8 |
||
| CDS GCA 72 bp | GCCTCCGAGGTTTCCGTCCTGGGCCCTGGGGAGTCTTaGGACGGCGGGCATCAGGAGGCAGGTGGGTGGATA | + |
|
Preference number: 6 (lower is better) Translates to: ASEVSVLGPGES*DGGHQEAGGWI Trigger: TATCCACCCACCTGCCTCCTGATGCCCGCCGTCGCAAGACTCCCCAGGGCCCAGGACGGAAACCTCGGAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 ENSMUST00000141966.8 ENSMUST00000155598.8 |
||
| CDS CCA 72 bp | GAACCCAGGTGTTCCGGGGCTCAGGCTCTCTGGCTCTaGCGTGTGCAAAGAATCTGCGCCCGAGGCGGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: EPRCSGAQALWL*RVQRICARGGA Trigger: CGCCCCGCCTCGGGCGCAGATTCTTTGCACACGCCAGAGCCAGAGAGCCTGAGCCCCGGAACACCTGGGTTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000141966.8 ENSMUST00000155598.8 |
||
| CDS CCA 72 bp | CTCGGGGAACCCAGGTGTTCCGGGGCTCAGGCTCTCTaGCTCTGGCGTGTGCAAAGAATCTGCGCCCGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LGEPRCSGAQAL*LWRVQRICARG Trigger: GCCTCGGGCGCAGATTCTTTGCACACGCCAGAGCCAGAGAGCCTGAGCCCCGGAACACCTGGGTTCCCCGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000141966.8 ENSMUST00000155598.8 |
||
| CDS CCA 72 bp | TGCCAGCCATTAGCACCAGCGATAGCAAAGCTGTGTTaGGCTGGCCCCGGGGCTTCTCCTGCCCAGACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: CQPLAPAIAKLC*AGPGASPAQTA Trigger: GGCAGTCTGGGCAGGAGAAGCCCCGGGGCCAGCCCAACACAGCTTTGCTATCGCTGGTGCTAATGGCTGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS CAA 72 bp | GTGCCAGCCATTAGCACCAGCGATAGCAAAGCTGTGTaGGGCTGGCCCCGGGGCTTCTCCTGCCCAGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: VPAISTSDSKAV*GWPRGFSCPDC Trigger: GCAGTCTGGGCAGGAGAAGCCCCGGGGCCAGCCCAACACAGCTTTGCTATCGCTGGTGCTAATGGCTGGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS CAA 90 bp | GTGGGGCCAGGCTCTCGACCTTCCCGGGCAGCCTGTGTAGACCCTTaGGCATTCTTCCTCACCAAGTGTCGCCGTACCCCAGGAACATCC | + |
|
Preference number: 6 (lower is better) Translates to: VGPGSRPSRAACVDP*AFFLTKCRRTPGTS Trigger: GGATGTTCCTGGGGTACGGCGACACTTGGTGAGGAAGAATGCCAAAGGGTCTACACAGGCTGCCCGGGAAGGTCGAGAGCCTGGCCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS GCA 72 bp | GGGCCGGCCTGTCCTCCGAAGGGGATCATCTTCAGCTaGACCTGCCACCTCTACCATCTGCAGGAGTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: GPACPPKGIIFS*TCHLYHLQECL Trigger: AAGGCACTCCTGCAGATGGTAGAGGTGGCAGGTGCAGCTGAAGATGATCCCCTTCGGAGGACAGGCCGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS CCA 72 bp | CGTCCTGGCTCTTCTCCTCCCCGGGATCCAGCCTCCTaGAGGATCTCCTCGAACCGCTCCACACCTAAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: RPGSSPPRDPAS*RISSNRSTPKV Trigger: TACCTTAGGTGTGGAGCGGTTCGAGGAGATCCTCCAGGAGGCTGGATCCCGGGGAGGAGAAGAGCCAGGACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 ENSMUST00000141966.8 ENSMUST00000155598.8 |
||
| CDS CCA 72 bp | GCCATTAGCACCAGCGATAGCAAAGCTGTGTTGGGCTaGCCCCGGGGCTTCTCCTGCCCAGACTGCCCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: AISTSDSKAVLG*PRGFSCPDCPE Trigger: TTCTGGGCAGTCTGGGCAGGAGAAGCCCCGGGGCCAGCCCAACACAGCTTTGCTATCGCTGGTGCTAATGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS GCA 72 bp | CCCGGGGCTTCTCCTGCCCAGACTGCCCAGAAGCGCTaGTGTTGTCTGGTACCAGTATGGTTGTTGCCCATG | + |
|
Preference number: 6 (lower is better) Translates to: PGASPAQTAQKR*CCLVPVWLLPM Trigger: CATGGGCAACAACCATACTGGTACCAGACAACAGCAGCGCTTCTGGGCAGTCTGGGCAGGAGAAGCCCCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS CCA 72 bp | CCTGAAGGTTGTAACTTCGATGTCCAGGCTGGGCTTTaGTCAAGGGACGCCCCGCAGCACCTCCGTCGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: PEGCNFDVQAGL*SRDAPQHLRRH Trigger: GTGACGACGGAGGTGCTGCGGGGCGTCCCTTGACCAAAGCCCAGCCTGGACATCGAAGTTACAACCTTCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS CCA 72 bp | CGGCCCTGCTCCTCTCGCTTCTTTAGCATCTGGCGTTaGAAATGGGCAACAGAACGCAGCAGCTCCTCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RPCSSRFFSIWR*KWATERSSSSP Trigger: GGGCGAGGAGCTGCTGCGTTCTGTTGCCCATTTCCAACGCCAGATGCTAAAGAAGCGAGAGGAGCAGGGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS CCA 72 bp | TATTGCTGCTGCTGCTGCTGCCTGCCTCTGAGTCGTTaGAGCCTGAGCAGCCATGGAGTGGGTGCTCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: YCCCCCCLPLSR*SLSSHGVGAPG Trigger: TCCAGGAGCACCCACTCCATGGCTGCTCAGGCTCCAACGACTCAGAGGCAGGCAGCAGCAGCAGCAGCAATA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS CAA 72 bp | GGCTCTCGACCTTCCCGGGCAGCCTGTGTAGACCCTTaGGCATTCTTCCTCACCAAGTGTCGCCGTACCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GSRPSRAACVDP*AFFLTKCRRTP Trigger: TGGGGTACGGCGACACTTGGTGAGGAAGAATGCCAAAGGGTCTACACAGGCTGCCCGGGAAGGTCGAGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS CAA 72 bp | ATATTGCTGCTGCTGCTGCTGCCTGCCTCTGAGTCGTaGGAGCCTGAGCAGCCATGGAGTGGGTGCTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: ILLLLLLPASES*EPEQPWSGCSW Trigger: CCAGGAGCACCCACTCCATGGCTGCTCAGGCTCCAACGACTCAGAGGCAGGCAGCAGCAGCAGCAGCAATAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS CAA 90 bp | ATGAAGAAAGTGCCAGCCATTAGCACCAGCGATAGCAAAGCTGTGTaGGGCTGGCCCCGGGGCTTCTCCTGCCCAGACTGCCCAGAAGCG | + |
|
Preference number: 6 (lower is better) Translates to: MKKVPAISTSDSKAV*GWPRGFSCPDCPEA Trigger: CGCTTCTGGGCAGTCTGGGCAGGAGAAGCCCCGGGGCCAGCCCAACACAGCTTTGCTATCGCTGGTGCTAATGGCTGGCACTTTCTTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS TCA 72 bp | GCAGGGCCACCAGCAGCCCTGTCACACGCTGTTCCTTaGCTTCCTGAATCTTGGGTTTGTCCCCAGGTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: AGPPAALSHAVP*LPESWVCPQVP Trigger: TGGCACCTGGGGACAAACCCAAGATTCAGGAAGTCAAGGAACAGCGTGTGACAGGGCTGCTGGTGGCCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS GCA 72 bp | CGCTCCACACCTAAGGTACGAAGTTCATCTTCCTCTTaGTCGGGGAACCCAGGTGTTCCGGGGCTCAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RSTPKVRSSSSS*SGNPGVPGLRL Trigger: GAGCCTGAGCCCCGGAACACCTGGGTTCCCCGAGCAAGAGGAAGATGAACTTCGTACCTTAGGTGTGGAGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 ENSMUST00000141966.8 ENSMUST00000155598.8 |
||
| CDS CCA 72 bp | AGCAGGCGGCCCTGCTCCTCTCGCTTCTTTAGCATCTaGCGTTGGAAATGGGCAACAGAACGCAGCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRRPCSSRFFSI*RWKWATERSSS Trigger: GGAGCTGCTGCGTTCTGTTGCCCATTTCCAACGCCAGATGCTAAAGAAGCGAGAGGAGCAGGGCCGCCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
||
| CDS CAA 90 bp | GCCCATGTCATATTGCTGCTGCTGCTGCTGCCTGCCTCTGAGTCGTaGGAGCCTGAGCAGCCATGGAGTGGGTGCTCCTGGAAGATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: AHVILLLLLLPASES*EPEQPWSGCSWKIL Trigger: CAAGATCTTCCAGGAGCACCCACTCCATGGCTGCTCAGGCTCCAACGACTCAGAGGCAGGCAGCAGCAGCAGCAGCAATATGACATGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS CAA 90 bp | AGCCCGCTGAGATGTTTCGGGGGAAGGAGAACTCTTTCTCGTCACTaGGGTGGCTGTGCTTTAGCAGGAGGGCCCGTAGCACATTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: SPLRCFGGRRTLSRH*GGCALAGGPVAHWL Trigger: GAGCCAATGTGCTACGGGCCCTCCTGCTAAAGCACAGCCACCCAAGTGACGAGAAAGAGTTCTCCTTCCCCCGAAACATCTCAGCGGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS GCA 72 bp | TGGAAATGGGCAACAGAACGCAGCAGCTCCTCGCCCTaGACTTCAGAAGGCGGTAGCACAACACTGCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: WKWATERSSSSP*TSEGGSTTLQS Trigger: GGACTGCAGTGTTGTGCTACCGCCTTCTGAAGTGCAGGGCGAGGAGCTGCTGCGTTCTGTTGCCCATTTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS CCA 72 bp | AGCCCCGCTTGTCTGGGGCTGTCACTGAGAATCCGCTaGGCACACTCAGTTTCTGGGTGTAGGTGTCCTCAA | + |
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Preference number: 6 (lower is better) Translates to: SPACLGLSLRIR*AHSVSGCRCPQ Trigger: TTGAGGACACCTACACCCAGAAACTGAGTGTGCCCAGCGGATTCTCAGTGACAGCCCCAGACAAGCGGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS CAA 90 bp | GCGCTGCTGTTGTCTGGTACCAGTATGGTTGTTGCCCATGTCATATaGCTGCTGCTGCTGCTGCCTGCCTCTGAGTCGTTGGAGCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: ALLLSGTSMVVAHVI*LLLLLPASESLEPE Trigger: CTCAGGCTCCAACGACTCAGAGGCAGGCAGCAGCAGCAGCAGCAATATGACATGGGCAACAACCATACTGGTACCAGACAACAGCAGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS TCA 72 bp | GACCACTCCCTGCAGCGCTGTGGACATGATCAGCTCTaGCACTCCTATCAGGTCCTTTGTCTTCTCCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: DHSLQRCGHDQL*HSYQVLCLLPQ Trigger: CTGGGGGAGAAGACAAAGGACCTGATAGGAGTGTCAGAGCTGATCATGTCCACAGCGCTGCAGGGAGTGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS GCA 72 bp | GCCTGTCCTCCGAAGGGGATCATCTTCAGCTGCACCTaGCACCTCTACCATCTGCAGGAGTGCCTTATCTTG | + |
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Preference number: 6 (lower is better) Translates to: ACPPKGIIFSCT*HLYHLQECLIL Trigger: CAAGATAAGGCACTCCTGCAGATGGTAGAGGTGGCAGGTGCAGCTGAAGATGATCCCCTTCGGAGGACAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS GCA 72 bp | TGGTTGTTGCCCATGTCATATTGCTGCTGCTGCTGCTaGCTGCCTCTGAGTCGTTGGAGCCTGAGCAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: WLLPMSYCCCCC*LPLSRWSLSSH Trigger: ATGGCTGCTCAGGCTCCAACGACTCAGAGGCAGGCAGCAGCAGCAGCAGCAATATGACATGGGCAACAACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS GCA 72 bp | GTATGGTTGTTGCCCATGTCATATTGCTGCTGCTGCTaGTGCCTGCCTCTGAGTCGTTGGAGCCTGAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: VWLLPMSYCCCC*CLPLSRWSLSS Trigger: GCTGCTCAGGCTCCAACGACTCAGAGGCAGGCAGCAGCAGCAGCAGCAATATGACATGGGCAACAACCATAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS CCA 72 bp | TGCTCCTCTCGCTTCTTTAGCATCTGGCGTTGGAAATaGGCAACAGAACGCAGCAGCTCCTCGCCCTGCACT | + |
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Preference number: 6 (lower is better) Translates to: CSSRFFSIWRWK*ATERSSSSPCT Trigger: AGTGCAGGGCGAGGAGCTGCTGCGTTCTGTTGCCCATTTCCAACGCCAGATGCTAAAGAAGCGAGAGGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS CCA 72 bp | CTGCCTGCCTCTGAGTCGTTGGAGCCTGAGCAGCCATaGAGTGGGTGCTCCTGGAAGATCTTGATCAGCTTA | + |
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Preference number: 6 (lower is better) Translates to: LPASESLEPEQP*SGCSWKILISL Trigger: TAAGCTGATCAAGATCTTCCAGGAGCACCCACTCCATGGCTGCTCAGGCTCCAACGACTCAGAGGCAGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS CCA 72 bp | CCGCATGGTCCGAACCTTTTTGACATAGGTGACATCTaGGTGGTGTTTGGGCGGCATGAGCAGCAGGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: PHGPNLFDIGDI*VVFGRHEQQVQ Trigger: CTGCACCTGCTGCTCATGCCGCCCAAACACCACCCAGATGTCACCTATGTCAAAAAGGTTCGGACCATGCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS GCA 72 bp | TCACTTTCATCAGTAGGGACCCTAGGCAACAGCGCCTaGTCCACCCCTGTCATACTGCCAATTCGTCTTCGC | + |
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Preference number: 6 (lower is better) Translates to: SLSSVGTLGNSA*STPVILPIRLR Trigger: GCGAAGACGAATTGGCAGTATGACAGGGGTGGAGCAGGCGCTGTTGCCTAGGGTCCCTACTGATGAAAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS GCA 72 bp | GGGAAGGAGAACTCTTTCTCGTCACTTGGGTGGCTGTaGTTTAGCAGGAGGGCCCGTAGCACATTGGCTCTA | + |
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Preference number: 6 (lower is better) Translates to: GKENSFSSLGWL*FSRRARSTLAL Trigger: TAGAGCCAATGTGCTACGGGCCCTCCTGCTAAAGCACAGCCACCCAAGTGACGAGAAAGAGTTCTCCTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS GCA 72 bp | GGATCATCTTCAGCTGCACCTGCCACCTCTACCATCTaGAGGAGTGCCTTATCTTGGGCAGACTTGGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: GSSSAAPATSTI*RSALSWADLGS Trigger: AGAGCCCAAGTCTGCCCAAGATAAGGCACTCCTGCAGATGGTAGAGGTGGCAGGTGCAGCTGAAGATGATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS GCA 72 bp | GTACCAGTATGGTTGTTGCCCATGTCATATTGCTGCTaGTGCTGCTGCCTGCCTCTGAGTCGTTGGAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: VPVWLLPMSYCC*CCCLPLSRWSL Trigger: CAGGCTCCAACGACTCAGAGGCAGGCAGCAGCAGCAGCAGCAATATGACATGGGCAACAACCATACTGGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS GCA 72 bp | CTGGTACCAGTATGGTTGTTGCCCATGTCATATTGCTaGTGCTGCTGCTGCCTGCCTCTGAGTCGTTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: LVPVWLLPMSYC*CCCCLPLSRWS Trigger: GCTCCAACGACTCAGAGGCAGGCAGCAGCAGCAGCAGCAATATGACATGGGCAACAACCATACTGGTACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS CCA 72 bp | TTTCGGGGGAAGGAGAACTCTTTCTCGTCACTTGGGTaGCTGTGCTTTAGCAGGAGGGCCCGTAGCACATTG | + |
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Preference number: 6 (lower is better) Translates to: FRGKENSFSSLG*LCFSRRARSTL Trigger: CAATGTGCTACGGGCCCTCCTGCTAAAGCACAGCCACCCAAGTGACGAGAAAGAGTTCTCCTTCCCCCGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS CAA 72 bp | AGATGTTTCGGGGGAAGGAGAACTCTTTCTCGTCACTaGGGTGGCTGTGCTTTAGCAGGAGGGCCCGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: RCFGGRRTLSRH*GGCALAGGPVA Trigger: TGCTACGGGCCCTCCTGCTAAAGCACAGCCACCCAAGTGACGAGAAAGAGTTCTCCTTCCCCCGAAACATCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS CAA 72 bp | GAAGGCGGTAGCACAACACTGCAGTCCAGGAAGGCATaGATAGCAGTCAGCAAGTCGTCTCGTTCATCCGCC | + |
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Preference number: 6 (lower is better) Translates to: EGGSTTLQSRKA*IAVSKSSRSSA Trigger: GGCGGATGAACGAGACGACTTGCTGACTGCTATCAATGCCTTCCTGGACTGCAGTGTTGTGCTACCGCCTTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS CAA 72 bp | GGCTTCTCCTGCCCAGACTGCCCAGAAGCGCTGCTGTaGTCTGGTACCAGTATGGTTGTTGCCCATGTCATA | + |
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Preference number: 6 (lower is better) Translates to: GFSCPDCPEALL*SGTSMVVAHVI Trigger: TATGACATGGGCAACAACCATACTGGTACCAGACAACAGCAGCGCTTCTGGGCAGTCTGGGCAGGAGAAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS TCA 72 bp | CTTTTCATGAGGTCAAGGTCGGCTGTGGCCAGTGTCTaGGCCTCACTTTCATCAGTAGGGACCCTAGGCAAC | + |
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Preference number: 6 (lower is better) Translates to: LFMRSRSAVASV*ASLSSVGTLGN Trigger: GTTGCCTAGGGTCCCTACTGATGAAAGTGAGGCTCAGACACTGGCCACAGCCGACCTTGACCTCATGAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS GCA 72 bp | TGTCTGGTACCAGTATGGTTGTTGCCCATGTCATATTaGTGCTGCTGCTGCTGCCTGCCTCTGAGTCGTTGG | + |
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Preference number: 6 (lower is better) Translates to: CLVPVWLLPMSY*CCCCCLPLSRW Trigger: CCAACGACTCAGAGGCAGGCAGCAGCAGCAGCAGCAATATGACATGGGCAACAACCATACTGGTACCAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS CCA 72 bp | CTCCTGCCCAGACTGCCCAGAAGCGCTGCTGTTGTCTaGTACCAGTATGGTTGTTGCCCATGTCATATTGCT | + |
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Preference number: 6 (lower is better) Translates to: LLPRLPRSAAVV*YQYGCCPCHIA Trigger: AGCAATATGACATGGGCAACAACCATACTGGTACCAGACAACAGCAGCGCTTCTGGGCAGTCTGGGCAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS CAA 72 bp | CCAATCCACACTCGGCCCACCAAGTACTCCAACTCATaGCTACTGCAGAACGAGAAGAAGGCCTCCTCGAAG | + |
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Preference number: 6 (lower is better) Translates to: PIHTRPTKYSNS*LLQNEKKASSK Trigger: CTTCGAGGAGGCCTTCTTCTCGTTCTGCAGTAGCAATGAGTTGGAGTACTTGGTGGGCCGAGTGTGGATTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS GCA 72 bp | AGTCAGCAAGTCGTCTCGTTCATCCGCCAGGTAGGCTaGCTCATGAAATTGCTTGTCAGACATGAGGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: SQQVVSFIRQVG*LMKLLVRHEGG Trigger: TCCACCCTCATGTCTGACAAGCAATTTCATGAGGCAGCCTACCTGGCGGATGAACGAGACGACTTGCTGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS GCA 72 bp | CAATCCACACTCGGCCCACCAAGTACTCCAACTCATTaGTACTGCAGAACGAGAAGAAGGCCTCCTCGAAGA | + |
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Preference number: 6 (lower is better) Translates to: QSTLGPPSTPTH*YCRTRRRPPRR Trigger: TCTTCGAGGAGGCCTTCTTCTCGTTCTGCAGTAGCAATGAGTTGGAGTACTTGGTGGGCCGAGTGTGGATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS CAA 72 bp | TTGTCTGGTACCAGTATGGTTGTTGCCCATGTCATATaGCTGCTGCTGCTGCTGCCTGCCTCTGAGTCGTTG | + |
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Preference number: 6 (lower is better) Translates to: LSGTSMVVAHVI*LLLLLPASESL Trigger: CAACGACTCAGAGGCAGGCAGCAGCAGCAGCAGCAATATGACATGGGCAACAACCATACTGGTACCAGACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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| CDS GCA 72 bp | TTCTGCACCTTCATCCTCTTGGAGAAAGAACTGAACTaGAGAGGGTGTAGTAGCAGGAGATGGTTGTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: FCTFILLEKELN*RGCSSRRWLLW Trigger: CCACAACAACCATCTCCTGCTACTACACCCTCTGCAGTTCAGTTCTTTCTCCAAGAGGATGAAGGTGCAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080067.13 ENSMUST00000115047.3 ENSMUST00000115049.9 |
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