Pregenerated sensors for SLC4A11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074796Ensembl transcript IDs: ENSMUST00000099362.11, ENSMUST00000127397.3
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCACAACTGAGTTCCTTATACAATCAAGGAAATGGGCTCTCTCCTaGGCATCAACTCTTTTATCAAAAGAATATCCACTCTTCTTAGCC | + |
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Preference number: 1 (lower is better) Translates to: CTTEFLIQSRKWALS*ASTLLSKEYPLFLA Trigger: GGCTAAGAAGAGTGGATATTCTTTTGATAAAAGAGTTGATGCCCAGGAGAGAGCCCATTTCCTTGATTGTATAAGGAACTCAGTTGTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| 3UTR-3UTR TCA 90 bp | TATCCACTCTTCTTAGCCCCACCCGACAGTGTTTCTGACCCCAAACTGAATGTTGTGAGCACACACCTTTaGAAACCACAGTGCCAAGGG | + |
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Preference number: 2 (lower is better) Translates to: YPLFLAPPDSVSDPKLNVVSTHL*KPQCQG Trigger: CCCTTGGCACTGTGGTTTTCAAAGGTGTGTGCTCAC...AACATTCAGTTTGGGGTCAGAAACACTGTCGGGTGGGGCTAAGAAGAGTGGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| 3UTR-3UTR GCA 90 bp | CCCAAACTGAATGTTAACAGGGTGAGGAGTGAGCACACACCTTTGAAAACCACATACCTCCCCATATGTTaGCACAGAGCAGGCCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: PKLNVNRVRSEHTPLKTTYLPIC*HRAGLK Trigger: CTTCAGGCCTGCTCTGTGGCAACATATGGGGAGGTA...TGTGGTTTTCAAAGGTGTGTGCTCACTCCTCACCCTGTTAACATTCAGTTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| 3UTR-3UTR CAA 90 bp | CCCAAACTGAATGTTAACAGGGTGAGGAGTGAGCACACACCTTTGAAAACCACAATACCTCCCCATATGTaGCCACAGAGCAGGCCTGAA | + |
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Preference number: 3 (lower is better) Translates to: PKLNVNRVRSEHTPLKTTIPPHM*PQSRPE Trigger: TTCAGGCCTGCTCTGTGGCAACATATGGGGAGGTAT...TGTGGTTTTCAAAGGTGTGTGCTCACTCCTCACCCTGTTAACATTCAGTTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR CCA 90 bp | AGCCACAGCCAGCTCATACCTCCCCATATGTTGCCACAGAGCAGGCCTGAAGAAGGCCCACCAGGACACTaGCACCCAGCGCCGTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SHSQLIPPHMLPQSRPEEGPPGH*HPAPSA Trigger: GGCTGACGGCGCTGGGTGCCAGTGTCCTGGTGGGCC...TTCTTCAGGCCTGCTCTGTGGCAACATATGGGGAGGTATGAGCTGGCTGTGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR TCA 90 bp | GCCACAGCCAGCTCATACCTCCCCATATGTTGCCACAGAGCAGGCCTGAAGAATGGGCCAGCACCAGGATaGCAAAGCGAACCTCACAGG | + |
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Preference number: 4 (lower is better) Translates to: ATASSYLPICCHRAGLKNGPAPG*QSEPHR Trigger: CCTGTGAGGTTCGCTTTGTCATCCTGGTGCTGGCCC...ATTCTTCAGGCCTGCTCTGTGGCAACATATGGGGAGGTATGAGCTGGCTGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR TCA 90 bp | GCCACAGCCAGCTCATACCTCCCCATATGTTGCCACAGAGCAGGCCTGAAGAATATGATGTCTGCTCCTTaGGCAGCAGGGCCACACGCG | + |
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Preference number: 4 (lower is better) Translates to: ATASSYLPICCHRAGLKNMMSAP*AAGPHA Trigger: CGCGTGTGGCCCTGCTGCTCAAGGAGCAGACATCAT...ATTCTTCAGGCCTGCTCTGTGGCAACATATGGGGAGGTATGAGCTGGCTGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR GCA 90 bp | GCCACAGCCAGCTCATACCTCCCCATATGTTGCCACAGAGCAGGCCTGAAGAATAGGGAGCTCATGCTGTaGCCTGCGGCTCTTGGCATC | + |
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Preference number: 4 (lower is better) Translates to: ATASSYLPICCHRAGLKNRELML*PAALGI Trigger: GATGCCAAGAGCCGCAGGGCACAGCATGAGCTCCCT...ATTCTTCAGGCCTGCTCTGTGGCAACATATGGGGAGGTATGAGCTGGCTGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR GCA 90 bp | AGCCACAGCCAGCTCATACCTCCCCATATGTTGCCACAGAGCAGGCCTGAAGAAGGCTTGGGGATCCACTaGAGAGGGAATGGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SHSQLIPPHMLPQSRPEEGLGIH*RGNGSS Trigger: GCTGCTGCCATTCCCTCTGCAGTGGATCCCCAAGCC...TTCTTCAGGCCTGCTCTGTGGCAACATATGGGGAGGTATGAGCTGGCTGTGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR CCA 90 bp | GCCACAGCCAGCTCATACCTCCCCATATGTTGCCACAGAGCAGGCCTGAAGAATAGGATGATGCTGGCCTaGGCCAGGAAGCCATCCAGG | + |
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Preference number: 4 (lower is better) Translates to: ATASSYLPICCHRAGLKNRMMLA*ARKPSR Trigger: CCTGGATGGCTTCCTGGCCCAGGCCAGCATCATCCT...ATTCTTCAGGCCTGCTCTGTGGCAACATATGGGGAGGTATGAGCTGGCTGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR TCA 90 bp | AGCCACAGCCAGCTCATACCTCCCCATATGTTGCCACAGAGCAGGCCTGAAGAACACTGCCGATGGCCTTaGAGGACAGAGAGTGGATCT | + |
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Preference number: 4 (lower is better) Translates to: SHSQLIPPHMLPQSRPEEHCRWP*RTESGS Trigger: AGATCCACTCTCTGTCCTTCAAGGCCATCGGCAGTG...TTCTTCAGGCCTGCTCTGTGGCAACATATGGGGAGGTATGAGCTGGCTGTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR TCA 90 bp | GCCACAGCCAGCTCATACCTCCCCATATGTTGCCACAGAGCAGGCCTGAAGAATGTGTGTGGGTGGGTATaGTGTCTGCTCCTTGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: ATASSYLPICCHRAGLKNVCGWV*CLLLEQ Trigger: CTGCTCAAGGAGCAGACATCATACCCACCCACACAC...ATTCTTCAGGCCTGCTCTGTGGCAACATATGGGGAGGTATGAGCTGGCTGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR GCA 90 bp | GCCACAGCCAGCTCATACCTCCCCATATGTTGCCACAGAGCAGGCCTGAAGAATGGTGGCAAAGGTGCGTaGCACCTCCATTGCAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: ATASSYLPICCHRAGLKNGGKGA*HLHCSL Trigger: AAGACTGCAATGGAGGTGGCACGCACCTTTGCCACC...ATTCTTCAGGCCTGCTCTGTGGCAACATATGGGGAGGTATGAGCTGGCTGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR CCA 90 bp | AGCCACAGCCAGCTCATACCTCCCCATATGTTGCCACAGAGCAGGCCTGAAGAAGCTTTTCATCTTGGGTaGGGCCAGCACCAGGATGAC | + |
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Preference number: 4 (lower is better) Translates to: SHSQLIPPHMLPQSRPEEAFHLG*GQHQDD Trigger: GTCATCCTGGTGCTGGCCCCACCCAAGATGAAAAGC...TTCTTCAGGCCTGCTCTGTGGCAACATATGGGGAGGTATGAGCTGGCTGTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR CCA 90 bp | CCCAAACTGAATGTTAACAGGGTGAGGAGTGAGCACACACCTTTGAAAACCACACGGGGCTGCTGGTTGTaGCCATCTCTACGGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: PKLNVNRVRSEHTPLKTTRGCWL*PSLRGW Trigger: CCAGCCCCGTAGAGATGGCCACAACCAGCAGCCCCG...TGTGGTTTTCAAAGGTGTGTGCTCACTCCTCACCCTGTTAACATTCAGTTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR CCA 90 bp | TTCTTAGCCCCACCCGACAGTGTTTCTGACCCCAAACTGAATGTTAACAGGGTGCACCAGCCTGTTCTCTaGTGCATTGACCAGGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: FLAPPDSVSDPKLNVNRVHQPVL*CIDQGR Trigger: GCGGCCCTGGTCAATGCACCAGAGAACAGGCTGGTG...CACCCTGTTAACATTCAGTTTGGGGTCAGAAACACTGTCGGGTGGGGCTAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR TCA 90 bp | GTTTCTGACCCCAAACTGAATGTTAACAGGGTGAGGAGTGAGCACACACCTTTGCCAAGAGGCTGGCGTTaGGTGCAGTGTGGAGACTGC | + |
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Preference number: 4 (lower is better) Translates to: VSDPKLNVNRVRSEHTPLPRGWR*VQCGDC Trigger: GCAGTCTCCACACTGCACTCAACGCCAGCCTCTTGG...CAAAGGTGTGTGCTCACTCCTCACCCTGTTAACATTCAGTTTGGGGTCAGAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR GCA 90 bp | GCCACAGCCAGCTCATACCTCCCCATATGTTGCCACAGAGCAGGCCTGAAGAATGCGTGCCACCTCCATTaGAGTCTTGGTGCTTTTCAT | + |
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Preference number: 4 (lower is better) Translates to: ATASSYLPICCHRAGLKNACHLH*SLGAFH Trigger: ATGAAAAGCACCAAGACTGCAATGGAGGTGGCACGC...ATTCTTCAGGCCTGCTCTGTGGCAACATATGGGGAGGTATGAGCTGGCTGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR GCA 90 bp | AGCCACAGCCAGCTCATACCTCCCCATATGTTGCCACAGAGCAGGCCTGAAGAAGCCGCCACCAGGTTCTaGTCAATGAAGAAAAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: SHSQLIPPHMLPQSRPEEAATRF*SMKKSK Trigger: CTTGCTTTTCTTCATTGAGCAGAACCTGGTGGCGGC...TTCTTCAGGCCTGCTCTGTGGCAACATATGGGGAGGTATGAGCTGGCTGTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR GCA 90 bp | AAAGAATATCCACTCTTCTTAGCCCCACCCGACAGTGTTTCTGACCCCAAACTGCAGCCTGTTCTCTGGTaGATTGACCAGGGCCGCCAC | + |
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Preference number: 4 (lower is better) Translates to: KEYPLFLAPPDSVSDPKLQPVLW*IDQGRH Trigger: GTGGCGGCCCTGGTCAATGCACCAGAGAACAGGCTG...CAGTTTGGGGTCAGAAACACTGTCGGGTGGGGCTAAGAAGAGTGGATATTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR CCA 90 bp | TTCTTAGCCCCACCCGACAGTGTTTCTGACCCCAAACTGAATGTTAACAGGGTGGTGCCCTGCGGCTCTTaGCATCATCATGGTGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: FLAPPDSVSDPKLNVNRVVPCGS*HHHGEQ Trigger: CTGCTCACCATGATGATGCCAAGAGCCGCAGGGCAC...CACCCTGTTAACATTCAGTTTGGGGTCAGAAACACTGTCGGGTGGGGCTAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR CCA 90 bp | GCCACAGCCAGCTCATACCTCCCCATATGTTGCCACAGAGCAGGCCTGAAGAATTCCGGATGTAGTGTGTaGGTGGGTATGATGTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: ATASSYLPICCHRAGLKNSGCSV*VGMMSA Trigger: AGCAGACATCATACCCACCCACACACTACATCCGGA...ATTCTTCAGGCCTGCTCTGTGGCAACATATGGGGAGGTATGAGCTGGCTGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR TCA 90 bp | GCCACAGCCAGCTCATACCTCCCCATATGTTGCCACAGAGCAGGCCTGAAGAATACACAATGGAGGAGTTaGCGGTGTCAAAGACCTCAT | + |
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Preference number: 4 (lower is better) Translates to: ATASSYLPICCHRAGLKNTQWRS*RCQRPH Trigger: ATGAGGTCTTTGACACCGTCAACTCCTCCATTGTGT...ATTCTTCAGGCCTGCTCTGTGGCAACATATGGGGAGGTATGAGCTGGCTGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR TCA 90 bp | AAAGAATATCCACTCTTCTTAGCCCCACCCGACAGTGTTTCTGACCCCAAACTGCTGTCTCATTCAGGATaGTGCTGGCCTGGGCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: KEYPLFLAPPDSVSDPKLLSHSG*CWPGPG Trigger: TCCTGGCCCAGGCCAGCATCATCCTGAATGAGACAG...CAGTTTGGGGTCAGAAACACTGTCGGGTGGGGCTAAGAAGAGTGGATATTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR TCA 90 bp | TTCTTAGCCCCACCCGACAGTGTTTCTGACCCCAAACTGAATGTTAACAGGGTGTCCCTGGATGGTATCTaGCAGCAGGTGGACCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: FLAPPDSVSDPKLNVNRVSLDGI*QQVDLA Trigger: AGCAAGGTCCACCTGCTGTCAGATACCATCCAGGGA...CACCCTGTTAACATTCAGTTTGGGGTCAGAAACACTGTCGGGTGGGGCTAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR TCA 90 bp | GTTTCTGACCCCAAACTGAATGTTAACAGGGTGAGGAGTGAGCACACACCTTTGGTCGAACCAGGCGGCTaGTGCACACATGCCGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: VSDPKLNVNRVRSEHTPLVEPGG*CTHAVS Trigger: AGAAACGGCATGTGTGCATCAGCCGCCTGGTTCGAC...CAAAGGTGTGTGCTCACTCCTCACCCTGTTAACATTCAGTTTGGGGTCAGAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR TCA 90 bp | TTCTTAGCCCCACCCGACAGTGTTTCTGACCCCAAACTGAATGTTAACAGGGTGGCTTCTGGCGGAAGGTaGTGTCTGAGAACATGGTGG | + |
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Preference number: 4 (lower is better) Translates to: FLAPPDSVSDPKLNVNRVASGGR*CLRTWW Trigger: CCACCATGTTCTCAGACATCACCTTCCGCCAGAAGC...CACCCTGTTAACATTCAGTTTGGGGTCAGAAACACTGTCGGGTGGGGCTAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR TCA 90 bp | TATCCACTCTTCTTAGCCCCACCCGACAGTGTTTCTGACCCCAAACTGAATGTTGTGAGCAGCTGTCTCTaGTGCACCAGAGCCTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: YPLFLAPPDSVSDPKLNVVSSCL*CTRASL Trigger: CAAGGAGGCTCTGGTGCATCAGAGACAGCTGCTCAC...AACATTCAGTTTGGGGTCAGAAACACTGTCGGGTGGGGCTAAGAAGAGTGGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR TCA 90 bp | GCCACAGCCAGCTCATACCTCCCCATATGTTGCCACAGAGCAGGCCTGAAGAATCCAGGTTCTGCTCAATaGAGAAAAGCAAGGAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: ATASSYLPICCHRAGLKNPGSAQ*RKARRA Trigger: TGCTCTCCTTGCTTTTCTTCATTGAGCAGAACCTGG...ATTCTTCAGGCCTGCTCTGTGGCAACATATGGGGAGGTATGAGCTGGCTGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR TCA 90 bp | GCCACAGCCAGCTCATACCTCCCCATATGTTGCCACAGAGCAGGCCTGAAGAATTATGCTCAGCATCCATaGCATCCAAGTACTTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: ATASSYLPICCHRAGLKNYAQHP*HPSTWP Trigger: AGGCCAAGTACTTGGATGTCATGGATGCTGAGCATA...ATTCTTCAGGCCTGCTCTGTGGCAACATATGGGGAGGTATGAGCTGGCTGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR GCA 90 bp | AAAGAATATCCACTCTTCTTAGCCCCACCCGACAGTGTTTCTGACCCCAAACTGATGCAGAGCCAAGACTaGTCGTACTGCACCCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: KEYPLFLAPPDSVSDPKLMQSQD*SYCTPR Trigger: CCGAGGGGTGCAGTACGAGCAGTCTTGGCTCTGCAT...CAGTTTGGGGTCAGAAACACTGTCGGGTGGGGCTAAGAAGAGTGGATATTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR GCA 90 bp | GTTTCTGACCCCAAACTGAATGTTAACAGGGTGAGGAGTGAGCACACACCTTTGAGGGCAGGGAGCTCATaGCGAAGGCACAGAGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: VSDPKLNVNRVRSEHTPLRAGSS*RRHRAV Trigger: TACTGCTCTGTGCCTTCGGCATGAGCTCCCTGCCCT...CAAAGGTGTGTGCTCACTCCTCACCCTGTTAACATTCAGTTTGGGGTCAGAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR CCA 90 bp | TTCTTAGCCCCACCCGACAGTGTTTCTGACCCCAAACTGAATGTTAACAGGGTGGCGTTGAGTGCAGTGTaGAGACTGCTGTTGGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: FLAPPDSVSDPKLNVNRVALSAV*RLLLGL Trigger: AAGCCCCAACAGCAGTCTCCACACTGCACTCAACGC...CACCCTGTTAACATTCAGTTTGGGGTCAGAAACACTGTCGGGTGGGGCTAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR CCA 90 bp | TTCTTAGCCCCACCCGACAGTGTTTCTGACCCCAAACTGAATGTTAACAGGGTGGGTCTCACGCACACATaGGTGCAGGTAGGGGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: FLAPPDSVSDPKLNVNRVGLTHT*VQVGAF Trigger: AAAAGCCCCTACCTGCACCCATGTGTGCGTGAGACC...CACCCTGTTAACATTCAGTTTGGGGTCAGAAACACTGTCGGGTGGGGCTAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR CCA 90 bp | CCCAAACTGAATGTTAACAGGGTGAGGAGTGAGCACACACCTTTGAAAACCACAAGGAGAGCACGGCGATaGGCAGGGCACAGTCAGACA | + |
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Preference number: 4 (lower is better) Translates to: PKLNVNRVRSEHTPLKTTRRARR*AGHSQT Trigger: TGTCTGACTGTGCCCTGCCCATCGCCGTGCTCTCCT...TGTGGTTTTCAAAGGTGTGTGCTCACTCCTCACCCTGTTAACATTCAGTTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR CCA 90 bp | GTTTCTGACCCCAAACTGAATGTTAACAGGGTGAGGAGTGAGCACACACCTTTGCCACTGCAGAGGGAATaGCAGCAGCAGCAAGGACAG | + |
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Preference number: 4 (lower is better) Translates to: VSDPKLNVNRVRSEHTPLPLQRE*QQQQGQ Trigger: CTGTCCTTGCTGCTGCTGCCATTCCCTCTGCAGTGG...CAAAGGTGTGTGCTCACTCCTCACCCTGTTAACATTCAGTTTGGGGTCAGAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR GCA 90 bp | TTCTTAGCCCCACCCGACAGTGTTTCTGACCCCAAACTGAATGTTAACAGGGTGCGGCTGATGCACACATaGCGTTTCTGTAGGGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: FLAPPDSVSDPKLNVNRVRLMHT*RFCRVF Trigger: GAAGACCCTACAGAAACGGCATGTGTGCATCAGCCG...CACCCTGTTAACATTCAGTTTGGGGTCAGAAACACTGTCGGGTGGGGCTAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR GCA 90 bp | CCCAAACTGAATGTTAACAGGGTGAGGAGTGAGCACACACCTTTGAAAACCACATATGGAGGGAGCTCATaGTGTGCCCTGCGGCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: PKLNVNRVRSEHTPLKTTYGGSS*CALRLL Trigger: CAAGAGCCGCAGGGCACAGCATGAGCTCCCTCCATA...TGTGGTTTTCAAAGGTGTGTGCTCACTCCTCACCCTGTTAACATTCAGTTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR GCA 90 bp | TATCCACTCTTCTTAGCCCCACCCGACAGTGTTTCTGACCCCAAACTGAATGTTCCACAGGCCCGTCCATaGATAGAAGGCGTTGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: YPLFLAPPDSVSDPKLNVPQARP*IEGVEV Trigger: GACTTCAACGCCTTCTATGCATGGACGGGCCTGTGG...AACATTCAGTTTGGGGTCAGAAACACTGTCGGGTGGGGCTAAGAAGAGTGGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR GCA 90 bp | CCCAAACTGAATGTTAACAGGGTGAGGAGTGAGCACACACCTTTGAAAACCACAGGTGGGTATGATGTCTaGTCCTTGAGCAGCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: PKLNVNRVRSEHTPLKTTGGYDV*SLSSRA Trigger: GGCCCTGCTGCTCAAGGAGCAGACATCATACCCACC...TGTGGTTTTCAAAGGTGTGTGCTCACTCCTCACCCTGTTAACATTCAGTTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR CCA 90 bp | TTCTTAGCCCCACCCGACAGTGTTTCTGACCCCAAACTGAATGTTAACAGGGTGGTATCTGACAGCAGGTaGACCTTGCTCTCCATAGGG | + |
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Preference number: 4 (lower is better) Translates to: FLAPPDSVSDPKLNVNRVVSDSR*TLLSIG Trigger: CCCTATGGAGAGCAAGGTCCACCTGCTGTCAGATAC...CACCCTGTTAACATTCAGTTTGGGGTCAGAAACACTGTCGGGTGGGGCTAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR CCA 90 bp | GTTTCTGACCCCAAACTGAATGTTAACAGGGTGAGGAGTGAGCACACACCTTTGCATACAGCACAGGCTTaGGGATCCACTGCAGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: VSDPKLNVNRVRSEHTPLHTAQA*GSTAEG Trigger: TCCCTCTGCAGTGGATCCCCAAGCCTGTGCTGTATG...CAAAGGTGTGTGCTCACTCCTCACCCTGTTAACATTCAGTTTGGGGTCAGAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR TCA 90 bp | AAAGAATATCCACTCTTCTTAGCCCCACCCGACAGTGTTTCTGACCCCAAACTGGCGGAAGGTGATGTCTaGGAACATGGTGGCAAAGGT | + |
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Preference number: 4 (lower is better) Translates to: KEYPLFLAPPDSVSDPKLAEGDV*EHGGKG Trigger: ACCTTTGCCACCATGTTCTCAGACATCACCTTCCGC...CAGTTTGGGGTCAGAAACACTGTCGGGTGGGGCTAAGAAGAGTGGATATTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR TCA 90 bp | AAAGAATATCCACTCTTCTTAGCCCCACCCGACAGTGTTTCTGACCCCAAACTGGGTAGGGGCTTTTCTTaGACTGGTAGAGGGTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: KEYPLFLAPPDSVSDPKLGRGFS*TGRGCS Trigger: GCTACACCCTCTACCAGTTCAAGAAAAGCCCCTACC...CAGTTTGGGGTCAGAAACACTGTCGGGTGGGGCTAAGAAGAGTGGATATTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR GCA 90 bp | TATCCACTCTTCTTAGCCCCACCCGACAGTGTTTCTGACCCCAAACTGAATGTTCTGCCCAGAGAACAGTaGATACAAGAGGCCTCCGAT | + |
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Preference number: 4 (lower is better) Translates to: YPLFLAPPDSVSDPKLNVLPREQ*IQEASD Trigger: ATCGGAGGCCTCTTGTATGCACTGTTCTCTGGGCAG...AACATTCAGTTTGGGGTCAGAAACACTGTCGGGTGGGGCTAAGAAGAGTGGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR GCA 90 bp | CCCAAACTGAATGTTAACAGGGTGAGGAGTGAGCACACACCTTTGAAAACCACACCCAGTGATAGGCAGTaGCCTTCACCAGCCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PKLNVNRVRSEHTPLKTTPSDRQ*PSPACS Trigger: AGAACAGGCTGGTGAAGGGCACTGCCTATCACTGGG...TGTGGTTTTCAAAGGTGTGTGCTCACTCCTCACCCTGTTAACATTCAGTTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR CCA 90 bp | AAAGAATATCCACTCTTCTTAGCCCCACCCGACAGTGTTTCTGACCCCAAACTGGTCTTCAGGAGCTTCTaGCGGAAGGTGATGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KEYPLFLAPPDSVSDPKLVFRSF*RKVMSE Trigger: CTCAGACATCACCTTCCGCCAGAAGCTCCTGAAGAC...CAGTTTGGGGTCAGAAACACTGTCGGGTGGGGCTAAGAAGAGTGGATATTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR CCA 90 bp | CCCAAACTGAATGTTAACAGGGTGAGGAGTGAGCACACACCTTTGAAAACCACAGGGATCCAAAAGCAATaGTCGGTAGGAGGCAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: PKLNVNRVRSEHTPLKTTGIQKQ*SVGGRR Trigger: TCGCCTGCCTCCTACCGACCATTGCTTTTGGATCCC...TGTGGTTTTCAAAGGTGTGTGCTCACTCCTCACCCTGTTAACATTCAGTTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR CCA 90 bp | TTCTTAGCCCCACCCGACAGTGTTTCTGACCCCAAACTGAATGTTAACAGGGTGTGCTCTGTCCAGCTATaGTCTTCTGCACATCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: FLAPPDSVSDPKLNVNRVCSVQL*SSAHRW Trigger: CCATCGATGTGCAGAAGACCATAGCTGGACAGAGCA...CACCCTGTTAACATTCAGTTTGGGGTCAGAAACACTGTCGGGTGGGGCTAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR TCA 90 bp | AAAGAATATCCACTCTTCTTAGCCCCACCCGACAGTGTTTCTGACCCCAAACTGTTGGCATCATCATGGTaGGCAGCTGTCTCTGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: KEYPLFLAPPDSVSDPKLLASSW*AAVSDA Trigger: TGCATCAGAGACAGCTGCTCACCATGATGATGCCAA...CAGTTTGGGGTCAGAAACACTGTCGGGTGGGGCTAAGAAGAGTGGATATTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR GCA 90 bp | GTTTCTGACCCCAAACTGAATGTTAACAGGGTGAGGAGTGAGCACACACCTTTGCCATTGCAGTCTTGGTaGTTTTCATCTTGGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VSDPKLNVNRVRSEHTPLPLQSW*FSSWVG Trigger: CCCCACCCAAGATGAAAAGCACCAAGACTGCAATGG...CAAAGGTGTGTGCTCACTCCTCACCCTGTTAACATTCAGTTTGGGGTCAGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR GCA 90 bp | TATCCACTCTTCTTAGCCCCACCCGACAGTGTTTCTGACCCCAAACTGAATGTTCAGAGAGTGGATCTGTaGCACCTCAAAAAGGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YPLFLAPPDSVSDPKLNVQRVDL*HLKKAL Trigger: GAGAGCCTTTTTGAGGTGGCACAGATCCACTCTCTG...AACATTCAGTTTGGGGTCAGAAACACTGTCGGGTGGGGCTAAGAAGAGTGGATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR CCA 90 bp | CCCAAACTGAATGTTAACAGGGTGAGGAGTGAGCACACACCTTTGAAAACCACATGTCTGAGAACATGGTaGCAAAGGTGCGTGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: PKLNVNRVRSEHTPLKTTCLRTW*QRCVPP Trigger: AGGTGGCACGCACCTTTGCCACCATGTTCTCAGACA...TGTGGTTTTCAAAGGTGTGTGCTCACTCCTCACCCTGTTAACATTCAGTTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR TCA 90 bp | AAAGAATATCCACTCTTCTTAGCCCCACCCGACAGTGTTTCTGACCCCAAACTGTATTCACCGGAGTCCTaGCAGTGTTCATTCTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: KEYPLFLAPPDSVSDPKLYSPES*QCSFCD Trigger: GTCACAGAATGAACACTGTCAGGACTCCGGTGAATA...CAGTTTGGGGTCAGAAACACTGTCGGGTGGGGCTAAGAAGAGTGGATATTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR GCA 90 bp | CCCAAACTGAATGTTAACAGGGTGAGGAGTGAGCACACACCTTTGAAAACCACAAAGGGAAAAAGTCCTTaGATTTCGGGGGCTGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PKLNVNRVRSEHTPLKTTKGKSP*ISGAEG Trigger: ACCCTCAGCCCCCGAAATGCAAGGACTTTTTCCCTT...TGTGGTTTTCAAAGGTGTGTGCTCACTCCTCACCCTGTTAACATTCAGTTTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR CCA 90 bp | CCCAAACTGAATGTTAACAGGGTGAGGAGTGAGCACACACCTTTGAAAACCACACTTCTAAGTCAGATTTaGAGGGCTGCACTTCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PKLNVNRVRSEHTPLKTTLLSQI*RAALQG Trigger: ACCTTGAAGTGCAGCCCTCCAAATCTGACTTAGAAG...TGTGGTTTTCAAAGGTGTGTGCTCACTCCTCACCCTGTTAACATTCAGTTTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR CCA 90 bp | CCCAAACTGAATGTTAACAGGGTGAGGAGTGAGCACACACCTTTGAAAACCACATTGAAGGACAGAGAGTaGATCTGTGCCACCTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PKLNVNRVRSEHTPLKTTLKDRE*ICATSK Trigger: TTTTGAGGTGGCACAGATCCACTCTCTGTCCTTCAA...TGTGGTTTTCAAAGGTGTGTGCTCACTCCTCACCCTGTTAACATTCAGTTTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR CCA 90 bp | CCCAAACTGAATGTTAACAGGGTGAGGAGTGAGCACACACCTTTGAAAACCACACAGATTGTAGCGGATTaGAATCATGGCAATCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: PKLNVNRVRSEHTPLKTTQIVAD*NHGNHD Trigger: ATCATGATTGCCATGATTCCAATCCGCTACAATCTG...TGTGGTTTTCAAAGGTGTGTGCTCACTCCTCACCCTGTTAACATTCAGTTTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS CCA 90 bp | CAGAGTGTGCCCAACATGATGAGGAGGCTGAGCACCGCTGTAGCCTaGCCCGAGTGTGTGCTGCCGGGGCTGCTGGTTGTGGCCATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QSVPNMMRRLSTAVA*PECVLPGLLVVAIS Trigger: AGAGATGGCCACAACCAGCAGCCCCGGCAGCACACACTCGGGCCAGGCTACAGCGGTGCTCAGCCTCCTCATCATGTTGGGCACACTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS GCA 90 bp | GGTTGTGGCCATCTCTACGGGGCTGGCCAAGAGGCTGGCGTTGAGTaGAGTGTGGAGACTGCTGTTGGGGCTTCTGCCAATGCCCAACAG | + |
|
Preference number: 5 (lower is better) Translates to: GCGHLYGAGQEAGVE*SVETAVGASANAQQ Trigger: CTGTTGGGCATTGGCAGAAGCCCCAACAGCAGTCTCCACACTGCACTCAACGCCAGCCTCTTGGCCAGCCCCGTAGAGATGGCCACAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS TCA 90 bp | GTACTGCACCCCTCGGACAGTGGCAGTGACTCCCTGGATGGTATCTaGCAGCAGGTGGACCTTGCTCTCCATAGGGGCTCCAGCATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VLHPSDSGSDSLDGI*QQVDLALHRGSSIC Trigger: ACAGATGCTGGAGCCCCTATGGAGAGCAAGGTCCACCTGCTGTCAGATACCATCCAGGGAGTCACTGCCACTGTCCGAGGGGTGCAGTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS TCA 90 bp | TGCAGAGCCAAGACTGCTCGTACTGCACCCCTCGGACAGTGGCAGTaGCTCCCTGGATGGTATCTGACAGCAGGTGGACCTTGCTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CRAKTARTAPLGQWQ*LPGWYLTAGGPCSP Trigger: TGGAGAGCAAGGTCCACCTGCTGTCAGATACCATCCAGGGAGTCACTGCCACTGTCCGAGGGGTGCAGTACGAGCAGTCTTGGCTCTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS GCA 90 bp | CAGGGCCACACGCGAGAAGAGCTGGTTGCCGTCCAGGGAGGTCAGTaGAATGTACAGAAAGAGCCCATACAGCACAGGCTTGGGGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: QGHTREELVAVQGGQ*NVQKEPIQHRLGDP Trigger: TGGATCCCCAAGCCTGTGCTGTATGGGCTCTTTCTGTACATTGCACTGACCTCCCTGGACGGCAACCAGCTCTTCTCGCGTGTGGCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS CCA 90 bp | ACATCATCCAGTGAGGTAGCTGTCTCATTCAGGATGATGCTGGCCTaGGCCAGGAAGCCATCCAGGTCCCGGTGTGCACGGACCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TSSSEVAVSFRMMLA*ARKPSRSRCARTSS Trigger: GGAAGAGGTCCGTGCACACCGGGACCTGGATGGCTTCCTGGCCCAGGCCAGCATCATCCTGAATGAGACAGCTACCTCACTGGATGATGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099362.11 ENSMUST00000127397.3 |
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| CDS-3UTR CAA 90 bp | AGCCACAGCCAGCTCATACCTCCCCATATGTTGCCACAGAGCAGGCCTGAAGAACTGTTCTCTGGTGCATaGACCAGGGCCGCCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SHSQLIPPHMLPQSRPEELFSGA*TRAATR Trigger: CCTGGTGGCGGCCCTGGTCAATGCACCAGAGAACAG...TTCTTCAGGCCTGCTCTGTGGCAACATATGGGGAGGTATGAGCTGGCTGTGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS GCA 90 bp | TCACCAGGGGCTGCCCAGAGAACAGTGCATACAAGAGGCCTCCGATaGTCTGTCCAGCTATGGTCTTCTGCACATCGATGGCCCCGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SPGAAQRTVHTRGLR*SVQLWSSAHRWPRL Trigger: CAAACGGGGCCATCGATGTGCAGAAGACCATAGCTGGACAGAGCATCGGAGGCCTCTTGTATGCACTGTTCTCTGGGCAGCCCCTGGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR CAA 90 bp | TTCTTAGCCCCACCCGACAGTGTTTCTGACCCCAAACTGAATGTTAACAGGGTGTGCCGGGGCTGCTGGTaGTGGCCATCTCTACGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: FLAPPDSVSDPKLNVNRVCRGCW*WPSLRG Trigger: GCCCCGTAGAGATGGCCACAACCAGCAGCCCCGGCA...CACCCTGTTAACATTCAGTTTGGGGTCAGAAACACTGTCGGGTGGGGCTAAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS TCA 90 bp | ACCGGAACTTGCTCATCTCAATTTCCTGGAAGCCATAGGAGCCGATaGGGGAGAAGGAGAGCACGGCGATGGGCAGGGCACAGTCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: TGTCSSQFPGSHRSR*GRRRARRWAGHSQT Trigger: TGTCTGACTGTGCCCTGCCCATCGCCGTGCTCTCCTTCTCCCTCATCGGCTCCTATGGCTTCCAGGAAATTGAGATGAGCAAGTTCCGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS TCA 90 bp | GCAAGGAGAGCAGGAAACCAAGACCCATGGCACTGCCGATGGCCTTaGAGGACAGAGAGTGGATCTGTGCCACCTCAAAAAGGCTCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: ARRAGNQDPWHCRWP*RTESGSVPPQKGSR Trigger: GCGAGAGCCTTTTTGAGGTGGCACAGATCCACTCTCTGTCCTTCAAGGCCATCGGCAGTGCCATGGGTCTTGGTTTCCTGCTCTCCTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS TCA 90 bp | TGCCGAAGGCACAGAGCAGTAGCAGCTGCAGGATCTGCAGGCCTGTaGAGTAGTGGATCTTCCTTTGGGGCACTCTCCGGATGTAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: CRRHRAVAAAGSAGL*SSGSSFGALSGCSV Trigger: CACACTACATCCGGAGAGTGCCCCAAAGGAAGATCCACTACTTCACAGGCCTGCAGATCCTGCAGCTGCTACTGCTCTGTGCCTTCGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS GCA 90 bp | GGGTGCGGTTGTCAACAGTATCACCAGGGGCTGCCCAGAGAACAGTaGATACAAGAGGCCTCCGATGCTCTGTCCAGCTATGGTCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GCGCQQYHQGLPREQ*IQEASDALSSYGLL Trigger: CAGAAGACCATAGCTGGACAGAGCATCGGAGGCCTCTTGTATGCACTGTTCTCTGGGCAGCCCCTGGTGATACTGTTGACAACCGCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS GCA 90 bp | GTCATCACAGATGACTCGAATCACCTGGGTGTAGATGGCCAGGGGTaGGGTTGTCAACAGTATCACCAGGGGCTGCCCAGAGAACAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VITDDSNHLGVDGQG*GCQQYHQGLPREQC Trigger: GCACTGTTCTCTGGGCAGCCCCTGGTGATACTGTTGACAACCGCACCCCTGGCCATCTACACCCAGGTGATTCGAGTCATCTGTGATGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS CCA 90 bp | CAGGAGATCCCAGTGATAGGCAGTGCCCTTCACCAGCCTGTTCTCTaGTGCATTGACCAGGGCCGCCACCAGGTTCTGCTCAATGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: QEIPVIGSALHQPVL*CIDQGRHQVLLNEE Trigger: TTCTTCATTGAGCAGAACCTGGTGGCGGCCCTGGTCAATGCACCAGAGAACAGGCTGGTGAAGGGCACTGCCTATCACTGGGATCTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS CCA 90 bp | TATGATGTCTGCTCCTTGAGCAGCAGGGCCACACGCGAGAAGAGCTaGTTGCCGTCCAGGGAGGTCAGTGCAATGTACAGAAAGAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: YDVCSLSSRATREKS*LPSREVSAMYRKSP Trigger: TGGGCTCTTTCTGTACATTGCACTGACCTCCCTGGACGGCAACCAGCTCTTCTCGCGTGTGGCCCTGCTGCTCAAGGAGCAGACATCATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR CAA 90 bp | GCCACAGCCAGCTCATACCTCCCCATATGTTGCCACAGAGCAGGCCTGAAGAATTATGATGTCTGCTCCTaGAGCAGCAGGGCCACACGC | + |
|
Preference number: 5 (lower is better) Translates to: ATASSYLPICCHRAGLKNYDVCS*SSRATR Trigger: GCGTGTGGCCCTGCTGCTCAAGGAGCAGACATCATA...ATTCTTCAGGCCTGCTCTGTGGCAACATATGGGGAGGTATGAGCTGGCTGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS TCA 90 bp | CTGTGCCCTGCGGCTCTTGGCATCATCATGGTGAGCAGCTGTCTCTaGTGCACCAGAGCCTCCTTGAATTCTTCCTCTGTGCGAGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LCPAALGIIMVSSCL*CTRASLNSSSVRVF Trigger: GAAGACTCGCACAGAGGAAGAATTCAAGGAGGCTCTGGTGCATCAGAGACAGCTGCTCACCATGATGATGCCAAGAGCCGCAGGGCACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS GCA 90 bp | CAGGATGATGCTGGCCTGGGCCAGGAAGCCATCCAGGTCCCGGTGTaGACGGACCTCTTCCTCAAAGTTCTTCAATTTCAGATACTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: QDDAGLGQEAIQVPV*TDLFLKVLQFQILA Trigger: CGCAAGTATCTGAAATTGAAGAACTTTGAGGAAGAGGTCCGTGCACACCGGGACCTGGATGGCTTCCTGGCCCAGGCCAGCATCATCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099362.11 ENSMUST00000127397.3 |
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| CDS GCA 90 bp | AGGGTCTTCATGGTACAGATGATGCAGAGCCAAGACTGCTCGTACTaGACCCCTCGGACAGTGGCAGTGACTCCCTGGATGGTATCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: RVFMVQMMQSQDCSY*TPRTVAVTPWMVSD Trigger: GTCAGATACCATCCAGGGAGTCACTGCCACTGTCCGAGGGGTGCAGTACGAGCAGTCTTGGCTCTGCATCATCTGTACCATGAAGACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS GCA 90 bp | ACCCATGGCACTGCCGATGGCCTTGAAGGACAGAGAGTGGATCTGTaGCACCTCAAAAAGGCTCTCGCTGGGGTTATACCGGAACTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: THGTADGLEGQRVDL*HLKKALAGVIPELA Trigger: AGCAAGTTCCGGTATAACCCCAGCGAGAGCCTTTTTGAGGTGGCACAGATCCACTCTCTGTCCTTCAAGGCCATCGGCAGTGCCATGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS CCA 90 bp | CCTCGGACAGTGGCAGTGACTCCCTGGATGGTATCTGACAGCAGGTaGACCTTGCTCTCCATAGGGGCTCCAGCATCTGTAAAGAGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: PRTVAVTPWMVSDSR*TLLSIGAPASVKSL Trigger: TAAGCTCTTTACAGATGCTGGAGCCCCTATGGAGAGCAAGGTCCACCTGCTGTCAGATACCATCCAGGGAGTCACTGCCACTGTCCGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS TCA 90 bp | TTCCTCTGTGCGAGTCTTCAGGAGCTTCTGGCGGAAGGTGATGTCTaGGAACATGGTGGCAAAGGTGCGTGCCACCTCCATTGCAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: FLCASLQELLAEGDV*EHGGKGACHLHCSL Trigger: AAGACTGCAATGGAGGTGGCACGCACCTTTGCCACCATGTTCTCAGACATCACCTTCCGCCAGAAGCTCCTGAAGACTCGCACAGAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS CCA 90 bp | AAGAGCTTAGCCATGAGCAGGTCCAGGTCACAGTCAGGTTCTGCGTaGTTAGGGTCCAGGGCAAAGCGGTTTAGCATAGTTCGGAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: KSLAMSRSRSQSGSA*LGSRAKRFSIVRRT Trigger: TGTCCTCCGAACTATGCTAAACCGCTTTGCCCTGGACCCTAACCACGCAGAACCTGACTGTGACCTGGACCTGCTCATGGCTAAGCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099362.11 ENSMUST00000127397.3 |
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| CDS CCA 90 bp | AGAGCCTCCTTGAATTCTTCCTCTGTGCGAGTCTTCAGGAGCTTCTaGCGGAAGGTGATGTCTGAGAACATGGTGGCAAAGGTGCGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RASLNSSSVRVFRSF*RKVMSENMVAKVRA Trigger: GGCACGCACCTTTGCCACCATGTTCTCAGACATCACCTTCCGCCAGAAGCTCCTGAAGACTCGCACAGAGGAAGAATTCAAGGAGGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR CAA 90 bp | GCCACAGCCAGCTCATACCTCCCCATATGTTGCCACAGAGCAGGCCTGAAGAATTGCGTGCCACCTCCATaGCAGTCTTGGTGCTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ATASSYLPICCHRAGLKNCVPPP*QSWCFS Trigger: TGAAAAGCACCAAGACTGCAATGGAGGTGGCACGCA...ATTCTTCAGGCCTGCTCTGTGGCAACATATGGGGAGGTATGAGCTGGCTGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR CAA 90 bp | TTCTTAGCCCCACCCGACAGTGTTTCTGACCCCAAACTGAATGTTAACAGGGTGCCATACAGCACAGGCTaGGGGATCCACTGCAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: FLAPPDSVSDPKLNVNRVPYSTG*GIHCRG Trigger: CCCTCTGCAGTGGATCCCCAAGCCTGTGCTGTATGG...CACCCTGTTAACATTCAGTTTGGGGTCAGAAACACTGTCGGGTGGGGCTAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR CAA 90 bp | GCCACAGCCAGCTCATACCTCCCCATATGTTGCCACAGAGCAGGCCTGAAGAATACCTCCATTGCAGTCTaGGTGCTTTTCATCTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: ATASSYLPICCHRAGLKNTSIAV*VLFILG Trigger: ACCCAAGATGAAAAGCACCAAGACTGCAATGGAGGT...ATTCTTCAGGCCTGCTCTGTGGCAACATATGGGGAGGTATGAGCTGGCTGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS GCA 90 bp | GGTGTGCACGGACCTCTTCCTCAAAGTTCTTCAATTTCAGATACTTaGGAGAGGTGTGTAAGAGCACGCAGCCACCCGTTGCAGCTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: GVHGPLPQSSSISDT*ERCVRARSHPLQLL Trigger: TAGAAGCTGCAACGGGTGGCTGCGTGCTCTTACACACCTCTCGCAAGTATCTGAAATTGAAGAACTTTGAGGAAGAGGTCCGTGCACACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099362.11 ENSMUST00000127397.3 |
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| CDS-3UTR CAA 90 bp | CCCAAACTGAATGTTAACAGGGTGAGGAGTGAGCACACACCTTTGAAAACCACATTGGTGCTTTTCATCTaGGGTGGGGCCAGCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PKLNVNRVRSEHTPLKTTLVLFI*GGASTR Trigger: CCTGGTGCTGGCCCCACCCAAGATGAAAAGCACCAA...TGTGGTTTTCAAAGGTGTGTGCTCACTCCTCACCCTGTTAACATTCAGTTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR CAA 90 bp | TATCCACTCTTCTTAGCCCCACCCGACAGTGTTTCTGACCCCAAACTGAATGTTAGAGACAGCCCCGTATaGATGATGGCAAGTAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: YPLFLAPPDSVSDPKLNVRDSPV*MMASSR Trigger: CCTGCTACTTGCCATCATCAATACGGGGCTGTCTCT...AACATTCAGTTTGGGGTCAGAAACACTGTCGGGTGGGGCTAAGAAGAGTGGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
||
| CDS-3UTR CAA 90 bp | GTTTCTGACCCCAAACTGAATGTTAACAGGGTGAGGAGTGAGCACACACCTTTGGTAGTGGATCTTCCTTaGGGGCACTCTCCGGATGTA | + |
|
Preference number: 5 (lower is better) Translates to: VSDPKLNVNRVRSEHTPLVVDLP*GHSPDV Trigger: TACATCCGGAGAGTGCCCCAAAGGAAGATCCACTAC...CAAAGGTGTGTGCTCACTCCTCACCCTGTTAACATTCAGTTTGGGGTCAGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR CAA 90 bp | TTCTTAGCCCCACCCGACAGTGTTTCTGACCCCAAACTGAATGTTAACAGGGTGTATTTGCCCACGCTCTaGCTTTTCCCAATGATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FLAPPDSVSDPKLNVNRVYLPTL*LFPMMP Trigger: TGGCATCATTGGGAAAAGCAAGAGCGTGGGCAAATA...CACCCTGTTAACATTCAGTTTGGGGTCAGAAACACTGTCGGGTGGGGCTAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
||
| CDS GCA 90 bp | GAAGGCATAAAGTGCAAGGAAGAAACTGTTCCACAGGCCCGTCCATaGATAGAAGGCGTTGAAGTCCAGATTGTAGTCATCACAGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: EGIKCKEETVPQARP*IEGVEVQIVVITDD Trigger: GTCATCTGTGATGACTACAATCTGGACTTCAACGCCTTCTATGCATGGACGGGCCTGTGGAACAGTTTCTTCCTTGCACTTTATGCCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR CAA 90 bp | CCCAAACTGAATGTTAACAGGGTGAGGAGTGAGCACACACCTTTGAAAACCACAATTTTGACCATGCCCTaGACAGCATCCAGCACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: PKLNVNRVRSEHTPLKTTILTMP*TASSTN Trigger: GTTTGTGCTGGATGCTGTCAAGGGCATGGTCAAAAT...TGTGGTTTTCAAAGGTGTGTGCTCACTCCTCACCCTGTTAACATTCAGTTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR CAA 90 bp | CCCAAACTGAATGTTAACAGGGTGAGGAGTGAGCACACACCTTTGAAAACCACAATGACATCCAAGTACTaGGCCTCAATGATTCGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: PKLNVNRVRSEHTPLKTTMTSKY*ASMIRG Trigger: ACCCCGAATCATTGAGGCCAAGTACTTGGATGTCAT...TGTGGTTTTCAAAGGTGTGTGCTCACTCCTCACCCTGTTAACATTCAGTTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS-3UTR CAA 90 bp | TATCCACTCTTCTTAGCCCCACCCGACAGTGTTTCTGACCCCAAACTGAATGTTTTTGTGTTCTCATCGTaGAGGGATCCAAAAGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: YPLFLAPPDSVSDPKLNVFVFSS*RDPKAM Trigger: CATTGCTTTTGGATCCCTCAACGATGAGAACACAAA...AACATTCAGTTTGGGGTCAGAAACACTGTCGGGTGGGGCTAAGAAGAGTGGATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS CCA 72 bp | CCTGGCCCGAGTGTGTGCTGCCGGGGCTGCTGGTTGTaGCCATCTCTACGGGGCTGGCCAAGAGGCTGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: PGPSVCCRGCWL*PSLRGWPRGWR Trigger: ACGCCAGCCTCTTGGCCAGCCCCGTAGAGATGGCCACAACCAGCAGCCCCGGCAGCACACACTCGGGCCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS CCA 72 bp | CCCAACATGATGAGGAGGCTGAGCACCGCTGTAGCCTaGCCCGAGTGTGTGCTGCCGGGGCTGCTGGTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: PNMMRRLSTAVA*PECVLPGLLVV Trigger: CACAACCAGCAGCCCCGGCAGCACACACTCGGGCCAGGCTACAGCGGTGCTCAGCCTCCTCATCATGTTGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS CAA 90 bp | GGGCTGGCCAAGAGGCTGGCGTTGAGTGCAGTGTGGAGACTGCTGTaGGGGCTTCTGCCAATGCCCAACAGGCTCACCAAGGAGGAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: GLAKRLALSAVWRLL*GLLPMPNRLTKEEV Trigger: GACTTCCTCCTTGGTGAGCCTGTTGGGCATTGGCAGAAGCCCCAACAGCAGTCTCCACACTGCACTCAACGCCAGCCTCTTGGCCAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS TCA 72 bp | CCCTCGGACAGTGGCAGTGACTCCCTGGATGGTATCTaGCAGCAGGTGGACCTTGCTCTCCATAGGGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PSDSGSDSLDGI*QQVDLALHRGS Trigger: GGAGCCCCTATGGAGAGCAAGGTCCACCTGCTGTCAGATACCATCCAGGGAGTCACTGCCACTGTCCGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS CCA 72 bp | AGTGAGGTAGCTGTCTCATTCAGGATGATGCTGGCCTaGGCCAGGAAGCCATCCAGGTCCCGGTGTGCACGG | + |
|
Preference number: 6 (lower is better) Translates to: SEVAVSFRMMLA*ARKPSRSRCAR Trigger: CCGTGCACACCGGGACCTGGATGGCTTCCTGGCCCAGGCCAGCATCATCCTGAATGAGACAGCTACCTCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099362.11 ENSMUST00000127397.3 |
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| CDS CCA 72 bp | CCAGTGATAGGCAGTGCCCTTCACCAGCCTGTTCTCTaGTGCATTGACCAGGGCCGCCACCAGGTTCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: PVIGSALHQPVL*CIDQGRHQVLL Trigger: GAGCAGAACCTGGTGGCGGCCCTGGTCAATGCACCAGAGAACAGGCTGGTGAAGGGCACTGCCTATCACTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS GCA 72 bp | GCCAGGGGTGCGGTTGTCAACAGTATCACCAGGGGCTaGCCAGAGAACAGTGCATACAAGAGGCCTCCGATG | + |
|
Preference number: 6 (lower is better) Translates to: ARGAVVNSITRG*PENSAYKRPPM Trigger: CATCGGAGGCCTCTTGTATGCACTGTTCTCTGGGCAGCCCCTGGTGATACTGTTGACAACCGCACCCCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS GCA 72 bp | CATCTCTACGGGGCTGGCCAAGAGGCTGGCGTTGAGTaGAGTGTGGAGACTGCTGTTGGGGCTTCTGCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: HLYGAGQEAGVE*SVETAVGASAN Trigger: ATTGGCAGAAGCCCCAACAGCAGTCTCCACACTGCACTCAACGCCAGCCTCTTGGCCAGCCCCGTAGAGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS CCA 72 bp | TGCTCCTTGAGCAGCAGGGCCACACGCGAGAAGAGCTaGTTGCCGTCCAGGGAGGTCAGTGCAATGTACAGA | + |
|
Preference number: 6 (lower is better) Translates to: CSLSSRATREKS*LPSREVSAMYR Trigger: TCTGTACATTGCACTGACCTCCCTGGACGGCAACCAGCTCTTCTCGCGTGTGGCCCTGCTGCTCAAGGAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS CAA 90 bp | GATGTCTGCTCCTTGAGCAGCAGGGCCACACGCGAGAAGAGCTGGTaGCCGTCCAGGGAGGTCAGTGCAATGTACAGAAAGAGCCCATAC | + |
|
Preference number: 6 (lower is better) Translates to: DVCSLSSRATREKSW*PSREVSAMYRKSPY Trigger: GTATGGGCTCTTTCTGTACATTGCACTGACCTCCCTGGACGGCAACCAGCTCTTCTCGCGTGTGGCCCTGCTGCTCAAGGAGCAGACATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS TCA 72 bp | AAGACTGCTCGTACTGCACCCCTCGGACAGTGGCAGTaGCTCCCTGGATGGTATCTGACAGCAGGTGGACCT | + |
|
Preference number: 6 (lower is better) Translates to: KTARTAPLGQWQ*LPGWYLTAGGP Trigger: AGGTCCACCTGCTGTCAGATACCATCCAGGGAGTCACTGCCACTGTCCGAGGGGTGCAGTACGAGCAGTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS TCA 72 bp | GGATGTAGTGTGTGGGTGGGTATGATGTCTGCTCCTTaGGCAGCAGGGCCACACGCGAGAAGAGCTGGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: GCSVWVGMMSAP*AAGPHARRAGC Trigger: GCAACCAGCTCTTCTCGCGTGTGGCCCTGCTGCTCAAGGAGCAGACATCATACCCACCCACACACTACATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS GCA 72 bp | GCTGGCCTGGGCCAGGAAGCCATCCAGGTCCCGGTGTaGACGGACCTCTTCCTCAAAGTTCTTCAATTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: AGLGQEAIQVPV*TDLFLKVLQFQ Trigger: CTGAAATTGAAGAACTTTGAGGAAGAGGTCCGTGCACACCGGGACCTGGATGGCTTCCTGGCCCAGGCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099362.11 ENSMUST00000127397.3 |
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| CDS CAA 72 bp | CTCGAATCACCTGGGTGTAGATGGCCAGGGGTGCGGTaGTCAACAGTATCACCAGGGGCTGCCCAGAGAACA | + |
|
Preference number: 6 (lower is better) Translates to: LESPGCRWPGVR*STVSPGAAQRT Trigger: TGTTCTCTGGGCAGCCCCTGGTGATACTGTTGACAACCGCACCCCTGGCCATCTACACCCAGGTGATTCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS CAA 72 bp | TCCTTGAGCAGCAGGGCCACACGCGAGAAGAGCTGGTaGCCGTCCAGGGAGGTCAGTGCAATGTACAGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SLSSRATREKSW*PSREVSAMYRK Trigger: CTTTCTGTACATTGCACTGACCTCCCTGGACGGCAACCAGCTCTTCTCGCGTGTGGCCCTGCTGCTCAAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS TCA 72 bp | CCTCTGTGCGAGTCTTCAGGAGCTTCTGGCGGAAGGTaGTGTCTGAGAACATGGTGGCAAAGGTGCGTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PLCESSGASGGR*CLRTWWQRCVP Trigger: TGGCACGCACCTTTGCCACCATGTTCTCAGACATCACCTTCCGCCAGAAGCTCCTGAAGACTCGCACAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS TCA 72 bp | CACAGAGCAGTAGCAGCTGCAGGATCTGCAGGCCTGTaGAGTAGTGGATCTTCCTTTGGGGCACTCTCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: HRAVAAAGSAGL*SSGSSFGALSG Trigger: TCCGGAGAGTGCCCCAAAGGAAGATCCACTACTTCACAGGCCTGCAGATCCTGCAGCTGCTACTGCTCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS GCA 72 bp | ATGGTACAGATGATGCAGAGCCAAGACTGCTCGTACTaGACCCCTCGGACAGTGGCAGTGACTCCCTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: MVQMMQSQDCSY*TPRTVAVTPWM Trigger: CATCCAGGGAGTCACTGCCACTGTCCGAGGGGTGCAGTACGAGCAGTCTTGGCTCTGCATCATCTGTACCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS GCA 72 bp | GGGGAAAGACCATCTTCATGTAGGGCAGGGAGCTCATaGCGAAGGCACAGAGCAGTAGCAGCTGCAGGATCT | + |
|
Preference number: 6 (lower is better) Translates to: GERPSSCRAGSS*RRHRAVAAAGS Trigger: AGATCCTGCAGCTGCTACTGCTCTGTGCCTTCGGCATGAGCTCCCTGCCCTACATGAAGATGGTCTTTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS CCA 72 bp | GTGGCAGTGACTCCCTGGATGGTATCTGACAGCAGGTaGACCTTGCTCTCCATAGGGGCTCCAGCATCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: VAVTPWMVSDSR*TLLSIGAPASV Trigger: TACAGATGCTGGAGCCCCTATGGAGAGCAAGGTCCACCTGCTGTCAGATACCATCCAGGGAGTCACTGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS CCA 72 bp | AGTATGGAGGGAGCTCATGCTGTGCCCTGCGGCTCTTaGCATCATCATGGTGAGCAGCTGTCTCTGATGCAC | + |
|
Preference number: 6 (lower is better) Translates to: SMEGAHAVPCGS*HHHGEQLSLMH Trigger: GTGCATCAGAGACAGCTGCTCACCATGATGATGCCAAGAGCCGCAGGGCACAGCATGAGCTCCCTCCATACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS GCA 72 bp | GCTGCCCAGAGAACAGTGCATACAAGAGGCCTCCGATaGTCTGTCCAGCTATGGTCTTCTGCACATCGATGG | + |
|
Preference number: 6 (lower is better) Translates to: AAQRTVHTRGLR*SVQLWSSAHRW Trigger: CCATCGATGTGCAGAAGACCATAGCTGGACAGAGCATCGGAGGCCTCTTGTATGCACTGTTCTCTGGGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS GCA 72 bp | GTGCAGTGTGGAGACTGCTGTTGGGGCTTCTGCCAATaGCCAACAGGCTCACCAAGGAGGAAGTCCTTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: VQCGDCCWGFCQ*PTGSPRRKSFL Trigger: CAAAAAGGACTTCCTCCTTGGTGAGCCTGTTGGGCATTGGCAGAAGCCCCAACAGCAGTCTCCACACTGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS GCA 72 bp | ACTGCCGATGGCCTTGAAGGACAGAGAGTGGATCTGTaGCACCTCAAAAAGGCTCTCGCTGGGGTTATACCG | + |
|
Preference number: 6 (lower is better) Translates to: TADGLEGQRVDL*HLKKALAGVIP Trigger: CGGTATAACCCCAGCGAGAGCCTTTTTGAGGTGGCACAGATCCACTCTCTGTCCTTCAAGGCCATCGGCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS GCA 72 bp | ACGCGAGAAGAGCTGGTTGCCGTCCAGGGAGGTCAGTaGAATGTACAGAAAGAGCCCATACAGCACAGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: TREELVAVQGGQ*NVQKEPIQHRL Trigger: AAGCCTGTGCTGTATGGGCTCTTTCTGTACATTGCACTGACCTCCCTGGACGGCAACCAGCTCTTCTCGCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS CCA 72 bp | GCCATGAGCAGGTCCAGGTCACAGTCAGGTTCTGCGTaGTTAGGGTCCAGGGCAAAGCGGTTTAGCATAGTT | + |
|
Preference number: 6 (lower is better) Translates to: AMSRSRSQSGSA*LGSRAKRFSIV Trigger: AACTATGCTAAACCGCTTTGCCCTGGACCCTAACCACGCAGAACCTGACTGTGACCTGGACCTGCTCATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099362.11 ENSMUST00000127397.3 |
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| CDS CAA 72 bp | GTGACTCCCTGGATGGTATCTGACAGCAGGTGGACCTaGCTCTCCATAGGGGCTCCAGCATCTGTAAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: VTPWMVSDSRWT*LSIGAPASVKS Trigger: GCTCTTTACAGATGCTGGAGCCCCTATGGAGAGCAAGGTCCACCTGCTGTCAGATACCATCCAGGGAGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS CAA 72 bp | CTGAGAACATGGTGGCAAAGGTGCGTGCCACCTCCATaGCAGTCTTGGTGCTTTTCATCTTGGGTGGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LRTWWQRCVPPP*QSWCFSSWVGP Trigger: TGGCCCCACCCAAGATGAAAAGCACCAAGACTGCAATGGAGGTGGCACGCACCTTTGCCACCATGTTCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS CAA 72 bp | CAGGATCTGCAGGCCTGTGAAGTAGTGGATCTTCCTTaGGGGCACTCTCCGGATGTAGTGTGTGGGTGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: QDLQACEVVDLP*GHSPDVVCGWV Trigger: TACCCACCCACACACTACATCCGGAGAGTGCCCCAAAGGAAGATCCACTACTTCACAGGCCTGCAGATCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS CAA 90 bp | ACAGTGGCAGTGACTCCCTGGATGGTATCTGACAGCAGGTGGACCTaGCTCTCCATAGGGGCTCCAGCATCTGTAAAGAGCTTAGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: TVAVTPWMVSDSRWT*LSIGAPASVKSLAM Trigger: CATGGCTAAGCTCTTTACAGATGCTGGAGCCCCTATGGAGAGCAAGGTCCACCTGCTGTCAGATACCATCCAGGGAGTCACTGCCACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS TCA 72 bp | GCGGCTCTTGGCATCATCATGGTGAGCAGCTGTCTCTaGTGCACCAGAGCCTCCTTGAATTCTTCCTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: AALGIIMVSSCL*CTRASLNSSSV Trigger: CACAGAGGAAGAATTCAAGGAGGCTCTGGTGCATCAGAGACAGCTGCTCACCATGATGATGCCAAGAGCCGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS TCA 72 bp | GCAGGAAACCAAGACCCATGGCACTGCCGATGGCCTTaGAGGACAGAGAGTGGATCTGTGCCACCTCAAAAA | + |
|
Preference number: 6 (lower is better) Translates to: AGNQDPWHCRWP*RTESGSVPPQK Trigger: TTTTTGAGGTGGCACAGATCCACTCTCTGTCCTTCAAGGCCATCGGCAGTGCCATGGGTCTTGGTTTCCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS GCA 72 bp | AAGAGGCCTCCGATGCTCTGTCCAGCTATGGTCTTCTaGACATCGATGGCCCCGTTTGTGTTCTCATCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: KRPPMLCPAMVF*TSMAPFVFSSL Trigger: CAACGATGAGAACACAAACGGGGCCATCGATGTGCAGAAGACCATAGCTGGACAGAGCATCGGAGGCCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS GCA 72 bp | TGTCAACAGTATCACCAGGGGCTGCCCAGAGAACAGTaGATACAAGAGGCCTCCGATGCTCTGTCCAGCTAT | + |
|
Preference number: 6 (lower is better) Translates to: CQQYHQGLPREQ*IQEASDALSSY Trigger: ATAGCTGGACAGAGCATCGGAGGCCTCTTGTATGCACTGTTCTCTGGGCAGCCCCTGGTGATACTGTTGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS CCA 72 bp | CACCTCCATTGCAGTCTTGGTGCTTTTCATCTTGGGTaGGGCCAGCACCAGGATGACAAAGCGAACCTCACA | + |
|
Preference number: 6 (lower is better) Translates to: HLHCSLGAFHLG*GQHQDDKANLT Trigger: TGTGAGGTTCGCTTTGTCATCCTGGTGCTGGCCCCACCCAAGATGAAAAGCACCAAGACTGCAATGGAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS CCA 72 bp | GTGCATACAAGAGGCCTCCGATGCTCTGTCCAGCTATaGTCTTCTGCACATCGATGGCCCCGTTTGTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: VHTRGLRCSVQL*SSAHRWPRLCS Trigger: AGAACACAAACGGGGCCATCGATGTGCAGAAGACCATAGCTGGACAGAGCATCGGAGGCCTCTTGTATGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS CAA 72 bp | ACTTGCGAGAGGTGTGTAAGAGCACGCAGCCACCCGTaGCAGCTTCTAAGTCAGATTTGGAGGGCTGCACTT | + |
|
Preference number: 6 (lower is better) Translates to: TCERCVRARSHP*QLLSQIWRAAL Trigger: AAGTGCAGCCCTCCAAATCTGACTTAGAAGCTGCAACGGGTGGCTGCGTGCTCTTACACACCTCTCGCAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099362.11 ENSMUST00000127397.3 |
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| CDS CAA 72 bp | AGCAGGAAACCAAGACCCATGGCACTGCCGATGGCCTaGAAGGACAGAGAGTGGATCTGTGCCACCTCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: SRKPRPMALPMA*KDREWICATSK Trigger: TTTTGAGGTGGCACAGATCCACTCTCTGTCCTTCAAGGCCATCGGCAGTGCCATGGGTCTTGGTTTCCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS TCA 72 bp | AAAACCGGATGCTCTCGCCAGACACAATGGAGGAGTTaGCGGTGTCAAAGACCTCATCCCCTAGGCTGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: KTGCSRQTQWRS*RCQRPHPLGCL Trigger: AAGACAGCCTAGGGGATGAGGTCTTTGACACCGTCAACTCCTCCATTGTGTCTGGCGAGAGCATCCGGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099362.11 ENSMUST00000127397.3 |
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| CDS TCA 72 bp | ACACATGCCGTTTCTGTAGGGTCTTCATGGTACAGATaGTGCAGAGCCAAGACTGCTCGTACTGCACCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: THAVSVGSSWYR*CRAKTARTAPL Trigger: GAGGGGTGCAGTACGAGCAGTCTTGGCTCTGCATCATCTGTACCATGAAGACCCTACAGAAACGGCATGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS GCA 72 bp | CAGTTCTGTGGTCGAACCAGGCGGCTGATGCACACATaGCGTTTCTGTAGGGTCTTCATGGTACAGATGATG | + |
|
Preference number: 6 (lower is better) Translates to: QFCGRTRRLMHT*RFCRVFMVQMM Trigger: CATCATCTGTACCATGAAGACCCTACAGAAACGGCATGTGTGCATCAGCCGCCTGGTTCGACCACAGAACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS GCA 72 bp | TTCTCTGGTGCATTGACCAGGGCCGCCACCAGGTTCTaGTCAATGAAGAAAAGCAAGGAGAGCAGGAAACCA | + |
|
Preference number: 6 (lower is better) Translates to: FSGALTRAATRF*SMKKSKESRKP Trigger: TGGTTTCCTGCTCTCCTTGCTTTTCTTCATTGAGCAGAACCTGGTGGCGGCCCTGGTCAATGCACCAGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS CAA 72 bp | AAAAACCGGATGCTCTCGCCAGACACAATGGAGGAGTaGACGGTGTCAAAGACCTCATCCCCTAGGCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: KNRMLSPDTMEE*TVSKTSSPRLS Trigger: AGACAGCCTAGGGGATGAGGTCTTTGACACCGTCAACTCCTCCATTGTGTCTGGCGAGAGCATCCGGTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099362.11 ENSMUST00000127397.3 |
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| CDS CAA 72 bp | TTCTGCACATCGATGGCCCCGTTTGTGTTCTCATCGTaGAGGGATCCAAAAGCAATGGTCGGTAGGAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: FCTSMAPFVFSS*RDPKAMVGRRQ Trigger: CTGCCTCCTACCGACCATTGCTTTTGGATCCCTCAACGATGAGAACACAAACGGGGCCATCGATGTGCAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS GCA 72 bp | CCTCAAAAAGGCTCTCGCTGGGGTTATACCGGAACTTaGTCATCTCAATTTCCTGGAAGCCATAGGAGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: PQKGSRWGYTGT*SSQFPGSHRSR Trigger: TCGGCTCCTATGGCTTCCAGGAAATTGAGATGAGCAAGTTCCGGTATAACCCCAGCGAGAGCCTTTTTGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS GCA 72 bp | GGACCTCTTCCTCAAAGTTCTTCAATTTCAGATACTTaGGAGAGGTGTGTAAGAGCACGCAGCCACCCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: GPLPQSSSISDT*ERCVRARSHPL Trigger: CAACGGGTGGCTGCGTGCTCTTACACACCTCTCGCAAGTATCTGAAATTGAAGAACTTTGAGGAAGAGGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099362.11 ENSMUST00000127397.3 |
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| CDS CCA 72 bp | TTGAATTCTTCCTCTGTGCGAGTCTTCAGGAGCTTCTaGCGGAAGGTGATGTCTGAGAACATGGTGGCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: LNSSSVRVFRSF*RKVMSENMVAK Trigger: CTTTGCCACCATGTTCTCAGACATCACCTTCCGCCAGAAGCTCCTGAAGACTCGCACAGAGGAAGAATTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS CCA 72 bp | GAGAGTGGATCTGTGCCACCTCAAAAAGGCTCTCGCTaGGGTTATACCGGAACTTGCTCATCTCAATTTCCT | + |
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Preference number: 6 (lower is better) Translates to: ESGSVPPQKGSR*GYTGTCSSQFP Trigger: AGGAAATTGAGATGAGCAAGTTCCGGTATAACCCCAGCGAGAGCCTTTTTGAGGTGGCACAGATCCACTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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| CDS CAA 72 bp | AGCACGCAGCCACCCGTTGCAGCTTCTAAGTCAGATTaGGAGGGCTGCACTTCAAGGTTGACATTGACAAAA | + |
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Preference number: 6 (lower is better) Translates to: STQPPVAASKSD*EGCTSRLTLTK Trigger: TTTTGTCAATGTCAACCTTGAAGTGCAGCCCTCCAAATCTGACTTAGAAGCTGCAACGGGTGGCTGCGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099362.11 ENSMUST00000127397.3 |
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| CDS TCA 72 bp | CTCCATGTTGTTCTTGAAGTATCCCTGAGTGCCGGCTaGGAAGTATTCACCGGAGTCCTGACAGTGTTCATT | + |
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Preference number: 6 (lower is better) Translates to: LHVVLEVSLSAG*EVFTGVLTVFI Trigger: AATGAACACTGTCAGGACTCCGGTGAATACTTCTCAGCCGGCACTCAGGGATACTTCAAGAACAACATGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099362.11 ENSMUST00000127397.3 |
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| CDS GCA 72 bp | AAGTGCAAGGAAGAAACTGTTCCACAGGCCCGTCCATaGATAGAAGGCGTTGAAGTCCAGATTGTAGTCATC | + |
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Preference number: 6 (lower is better) Translates to: KCKEETVPQARP*IEGVEVQIVVI Trigger: GATGACTACAATCTGGACTTCAACGCCTTCTATGCATGGACGGGCCTGTGGAACAGTTTCTTCCTTGCACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099362.11 |
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