Pregenerated sensors for SLC49A4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022848Ensembl transcript IDs: ENSMUST00000023554.9, ENSMUST00000149892.2
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TATGAGCCCTGCTACTCTCCGCAGCGAGAAGGGGTGCCGTCCCGTTaGGAGCTGGAACAACCAGGGGCCCGACGAGAAACGCACACGCTC | + |
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Preference number: 1 (lower is better) Translates to: YEPCYSPQREGVPSR*ELEQPGARRETHTL Trigger: GAGCGTGTGCGTTTCTCGTCGGGCCCCTGGTTGTTCCAGCTCCCAACGGGACGGCACCCCTTCTCGCTGCGGAGAGTAGCAGGGCTCATA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149892.2 |
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| 3UTR GCA 90 bp | GGTCAGCACGGGTACAGTGCACATGGGGGTGACCAACTCGGGCAGTaGGTCCTGTGTGAGCTGTCACAGCTCCACACAAGAGTGCCGCCA | + |
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Preference number: 1 (lower is better) Translates to: GQHGYSAHGGDQLGQ*VLCELSQLHTRVPP Trigger: TGGCGGCACTCTTGTGTGGAGCTGTGACAGCTCACACAGGACGCACTGCCCGAGTTGGTCACCCCCATGTGCACTGTACCCGTGCTGACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023554.9 ENSMUST00000149892.2 |
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| 3UTR GCA 90 bp | TCGGTCTTTAATATGAGCCCTGCTACTCTCCGCAGCGAGAAGGGGTaGCGTCCCGTTGGGAGCTGGAACAACCAGGGGCCCGACGAGAAA | + |
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Preference number: 1 (lower is better) Translates to: SVFNMSPATLRSEKG*RPVGSWNNQGPDEK Trigger: TTTCTCGTCGGGCCCCTGGTTGTTCCAGCTCCCAACGGGACGGCACCCCTTCTCGCTGCGGAGAGTAGCAGGGCTCATATTAAAGACCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149892.2 |
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| 3UTR CCA 90 bp | GGCAGTGGCTCGCTCGTCAGCAGAGAACCACGTCGTAGAGAGGAATaGCGCCGCATTCATGACAGTCGGACCTGCCAGTCCGTTCAGTAT | + |
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Preference number: 1 (lower is better) Translates to: GSGSLVSREPRRREE*RRIHDSRTCQSVQY Trigger: ATACTGAACGGACTGGCAGGTCCGACTGTCATGAATGCGGCGCCATTCCTCTCTACGACGTGGTTCTCTGCTGACGAGCGAGCCACTGCC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149892.2 |
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| 3UTR GCA 90 bp | TCGGGCAGTGCGTCCTGTGTGAGCTGTCACAGCTCCACACAAGAGTaGCGCCAACACAGCTGTGCTGTCCACAGAGTTTTCACATCCTCA | + |
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Preference number: 1 (lower is better) Translates to: SGSASCVSCHSSTQE*RQHSCAVHRVFTSS Trigger: TGAGGATGTGAAAACTCTGTGGACAGCACAGCTGTGTTGGCGGCACTCTTGTGTGGAGCTGTGACAGCTCACACAGGACGCACTGCCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023554.9 ENSMUST00000149892.2 |
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| 3UTR TCA 90 bp | ACTGGTGTTAACTCTGAGGACTTTCCCCCTCTGACTTCACAATTTTaGGCCTCAGAAGATACTGGGCAATCCCAGAACCCTCCTTCAAGA | + |
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Preference number: 1 (lower is better) Translates to: TGVNSEDFPPLTSQF*ASEDTGQSQNPPSR Trigger: TCTTGAAGGAGGGTTCTGGGATTGCCCAGTATCTTCTGAGGCTCAAAATTGTGAAGTCAGAGGGGGAAAGTCCTCAGAGTTAACACCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
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| 3UTR GCA 90 bp | CAATCTAACCTGGTAAGTTACAGTGGGTGCTGGACTTTACACGTGTaGCACACACGTCTGAAGACACACATGCTTCATGTGGTTCTCAGT | + |
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Preference number: 1 (lower is better) Translates to: QSNLVSYSGCWTLHV*HTRLKTHMLHVVLS Trigger: ACTGAGAACCACATGAAGCATGTGTGTCTTCAGACGTGTGTGGCACACGTGTAAAGTCCAGCACCCACTGTAACTTACCAGGTTAGATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
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| 3UTR GCA 90 bp | AATTTCCCTTTGAAACTTCACAAGGCAGGCCTCCATCTTCTGCACTaGTCCCAATACTCTTATCTTCCAAGCTCCTACAGAGCAGCTCAC | + |
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Preference number: 1 (lower is better) Translates to: NFPLKLHKAGLHLLH*SQYSYLPSSYRAAH Trigger: GTGAGCTGCTCTGTAGGAGCTTGGAAGATAAGAGTATTGGGAGCAGTGCAGAAGATGGAGGCCTGCCTTGTGAAGTTTCAAAGGGAAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
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| 3UTR TCA 90 bp | CCCCGGCTGACTGGACGACAGAATTCATATAGCAAACAGACCCGTTaGGTATTTAAATTTCCCTTTGAAACTTCACAAGGCAGGCCTCCA | + |
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Preference number: 1 (lower is better) Translates to: PRLTGRQNSYSKQTR*VFKFPFETSQGRPP Trigger: TGGAGGCCTGCCTTGTGAAGTTTCAAAGGGAAATTTAAATACTCAACGGGTCTGTTTGCTATATGAATTCTGTCGTCCAGTCAGCCGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
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| 3UTR CCA 90 bp | GCAGATACTACAGAGGACTTGACGATCCAAAGGCATTTACTTCTTTaGGGCCATCTCTATACATTCTCCATACAGAGCTTGGATTGGTGG | + |
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Preference number: 1 (lower is better) Translates to: ADTTEDLTIQRHLLL*GHLYTFSIQSLDWW Trigger: CCACCAATCCAAGCTCTGTATGGAGAATGTATAGAGATGGCCCCAAAGAAGTAAATGCCTTTGGATCGTCAAGTCCTCTGTAGTATCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
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| 3UTR GCA 90 bp | GACAAGTTGGGGAGGAAAGGGTTTATTCAGCTTACACTTGCACATTaGTGTTCATCACCAAAGGAAGTTTTGGACAGGAACTCAAACAGG | + |
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Preference number: 1 (lower is better) Translates to: DKLGRKGFIQLTLAH*CSSPKEVLDRNSNR Trigger: CCTGTTTGAGTTCCTGTCCAAAACTTCCTTTGGTGATGAACAGCAATGTGCAAGTGTAAGCTGAATAAACCCTTTCCTCCCCAACTTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
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| 3UTR TCA 90 bp | ACGGGAATATGTCCTCACCAATTAATAATGCCTCGTGTTCATTTATaGGGACTGAATTATTCATCAGAACCTTTGCATAAGATCCTGGTG | + |
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Preference number: 1 (lower is better) Translates to: TGICPHQLIMPRVHL*GLNYSSEPLHKILV Trigger: CACCAGGATCTTATGCAAAGGTTCTGATGAATAATTCAGTCCTCATAAATGAACACGAGGCATTATTAATTGGTGAGGACATATTCCCGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
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| 3UTR CCA 90 bp | ATAAGTAGATGGGGAGTTAATCTCCTCAACTTTAAATCCCTTAGCTaGGATTCCCTCGTTAGACAGGCTTCATTAAAAACAAGCTGTAAA | + |
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Preference number: 1 (lower is better) Translates to: ISRWGVNLLNFKSLS*DSLVRQASLKTSCK Trigger: TTTACAGCTTGTTTTTAATGAAGCCTGTCTAACGAGGGAATCCCAGCTAAGGGATTTAAAGTTGAGGAGATTAACTCCCCATCTACTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
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| 3UTR-3UTR GCA 90 bp | GAGGAAGAGGAGGCCGGGGCGGAAAATAAGCTAGCGTGGCAGAGAATATTAGGCCGCAGCGAGAAGGGGTaGCGTCCCGTTGGGAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: EEEEAGAENKLAWQRILGRSEKG*RPVGSW Trigger: CCAGCTCCCAACGGGACGGCACCCCTTCTCGCTGCG...GCCTAATATTCTCTGCCACGCTAGCTTATTTTCCGCCCCGGCCTCCTCTTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000149892.2 |
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| 3UTR-3UTR TCA 90 bp | GCCATACTCACAGAAACAAGGGTGGGTGGGAAGGAGCCAGGGCCTGTTCCCAAGCAGAAGTTAGCGGCGTaGGTCCCATCCCTCTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: AILTETRVGGKEPGPVPKQKLAA*VPSLCC Trigger: ACAGCAGAGGGATGGGACTCACGCCGCTAACTTCTG...CTTGGGAACAGGCCCTGGCTCCTTCCCACCCACCCTTGTTTCTGTGAGTATGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
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| 3UTR-3UTR CCA 90 bp | TACACTCGGTGGCGGTCTATGTACCACCAGCCCCTCCCTTCTGGACTCGAGAATTTCCTTCAGGCCCACTaGCTGCCTGCCCCTGTGAAG | + |
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Preference number: 2 (lower is better) Translates to: YTRWRSMYHQPLPSGLENFLQAH*LPAPVK Trigger: CTTCACAGGGGCAGGCAGCCAGTGGGCCTGAAGGAA...ATTCTCGAGTCCAGAAGGGAGGGGCTGGTGGTACATAGACCGCCACCGAGTGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
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| 3UTR-3UTR CCA 90 bp | ACCTACAAAAGCTCCGCCGGTAACTCAGCCGCTGGCTCGCAGCAGCGACACTGGCGTCGTAGAGAGGAATaGCGCCGCATTCATGACAGT | + |
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Preference number: 2 (lower is better) Translates to: TYKSSAGNSAAGSQQRHWRRREE*RRIHDS Trigger: ACTGTCATGAATGCGGCGCCATTCCTCTCTACGACG...CCAGTGTCGCTGCTGCGAGCCAGCGGCTGAGTTACCGGCGGAGCTTTTGTAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149892.2 |
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| 3UTR-3UTR GCA 90 bp | TACACTCGGTGGCGGTCTATGTACCACCAGCCCCTCCCTTCTGGACTCGAGAATTGGCAATGGAGTTGCTaGGGCTCTGGAAGCTTAGGG | + |
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Preference number: 2 (lower is better) Translates to: YTRWRSMYHQPLPSGLENWQWSC*GSGSLG Trigger: CCCTAAGCTTCCAGAGCCGCAGCAACTCCATTGCCA...ATTCTCGAGTCCAGAAGGGAGGGGCTGGTGGTACATAGACCGCCACCGAGTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
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| 3UTR CAA 90 bp | GGCAGGAGCCGATGCAGAAGCCATGGAGGAGTGCTGCTTACTGGATaGCTCCCTCTGGTTTGCTCAGCCTGCTTTCTTATAGAACCCAGG | + |
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Preference number: 2 (lower is better) Translates to: GRSRCRSHGGVLLTG*LPLVCSACFLIEPR Trigger: CCTGGGTTCTATAAGAAAGCAGGCTGAGCAAACCAGAGGGAGCAATCCAGTAAGCAGCACTCCTCCATGGCTTCTGCATCGGCTCCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
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| 3UTR-3UTR TCA 90 bp | ATTGCTCCCTCTGGTTTGCTCAGCCTGCTTTCTTATAGAACCCAGGATCATCAGGCTACCAGGAGCTGCTaGTGCCTGCACGAGACTGGG | + |
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Preference number: 2 (lower is better) Translates to: IAPSGLLSLLSYRTQDHQATRSC*CLHETG Trigger: CCCAGTCTCGTGCAGGCATCAGCAGCTCCTGGTAGC...CTGATGATCCTGGGTTCTATAAGAAAGCAGGCTGAGCAAACCAGAGGGAGCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
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| 3UTR-3UTR GCA 90 bp | TACACTCGGTGGCGGTCTATGTACCACCAGCCCCTCCCTTCTGGACTCGAGAATCAGGCCTCCATCTTCTaGACTGCTCCCAATACTCTT | + |
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Preference number: 2 (lower is better) Translates to: YTRWRSMYHQPLPSGLENQASIF*TAPNTL Trigger: AAGAGTATTGGGAGCAGTGCAGAAGATGGAGGCCTG...ATTCTCGAGTCCAGAAGGGAGGGGCTGGTGGTACATAGACCGCCACCGAGTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
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| 3UTR-3UTR CCA 90 bp | AACCTGGTAAGTTACAGTGGGTGCTGGACTTTACACGTGTGCCACACACGTCTGTCACAGAAACAAGGGTaGGTGGGAAGGAGCCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: NLVSYSGCWTLHVCHTRLSQKQG*VGRSQG Trigger: GCCCTGGCTCCTTCCCACCCACCCTTGTTTCTGTGA...CAGACGTGTGTGGCACACGTGTAAAGTCCAGCACCCACTGTAACTTACCAGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
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| 3UTR-3UTR CCA 90 bp | TACACTCGGTGGCGGTCTATGTACCACCAGCCCCTCCCTTCTGGACTCGAGAATTCTCCATACAGAGCTTaGATTGGTGGAGGGCTAAGG | + |
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Preference number: 2 (lower is better) Translates to: YTRWRSMYHQPLPSGLENSPYRA*IGGGLR Trigger: CCTTAGCCCTCCACCAATCCAAGCTCTGTATGGAGA...ATTCTCGAGTCCAGAAGGGAGGGGCTGGTGGTACATAGACCGCCACCGAGTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
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| 3UTR-3UTR CCA 90 bp | ATCCCAGAACCCTCCTTCAAGACCCGGGTAAGTTGGTACATCGTGAATTTCTGGAGAAACAAGGGTGGGTaGGAAGGAGCCAGGGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: IPEPSFKTRVSWYIVNFWRNKGG*EGARAC Trigger: ACAGGCCCTGGCTCCTTCCCACCCACCCTTGTTTCT...CCAGAAATTCACGATGTACCAACTTACCCGGGTCTTGAAGGAGGGTTCTGGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
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| 3UTR CAA 90 bp | AAGATACTGGGCAATCCCAGAACCCTCCTTCAAGACCCGGGTAAGTaGGTACATCGTGAATTTCTGGTGAGAGGTGCGTCTGCAGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: KILGNPRTLLQDPGK*VHREFLVRGASAGV Trigger: CACACCTGCAGACGCACCTCTCACCAGAAATTCACGATGTACCAACTTACCCGGGTCTTGAAGGAGGGTTCTGGGATTGCCCAGTATCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
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| 3UTR-3UTR GCA 90 bp | ATTGCTCCCTCTGGTTTGCTCAGCCTGCTTTCTTATAGAACCCAGGATCATCAGCATCCCTCTGCTGTGTaGCTGGGAGGGGTCATCTTC | + |
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Preference number: 2 (lower is better) Translates to: IAPSGLLSLLSYRTQDHQHPSAV*LGGVIF Trigger: GAAGATGACCCCTCCCAGGCACACAGCAGAGGGATG...CTGATGATCCTGGGTTCTATAAGAAAGCAGGCTGAGCAAACCAGAGGGAGCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
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| 3UTR-3UTR GCA 90 bp | AAGGAGACTGAGCAGACACGACCCAGGAAGGCACCAGTTGAACCAAGACAACTCACACTCCCAGGAGGATaGAGGAGGCATACAATGTCA | + |
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Preference number: 2 (lower is better) Translates to: KETEQTRPRKAPVEPRQLTLPGG*RRHTMS Trigger: TGACATTGTATGCCTCCTGCATCCTCCTGGGAGTGT...GAGTTGTCTTGGTTCAACTGGTGCCTTCCTGGGTCGTGTCTGCTCAGTCTCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149892.2 |
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| 3UTR-3UTR CCA 90 bp | AGGAGGAGCAGGATCAGTTTCAGCATGCCCCGGATAAAATCCGCAAACCTTGCCCACAGCCTCCAACTATaGACCAGAATCCAATCCAGC | + |
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Preference number: 2 (lower is better) Translates to: RRSRISFSMPRIKSANLAHSLQL*TRIQSS Trigger: GCTGGATTGGATTCTGGTCCATAGTTGGAGGCTGTG...GGCAAGGTTTGCGGATTTTATCCGGGGCATGCTGAAACTGATCCTGCTCCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149892.2 |
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| 3UTR-3UTR TCA 90 bp | GTCACTGTTGTCAAAGGCAAGTGGGTGATGCTGTTTAGGCAGGTCAGGGTGAACGAGGTAACTCAGCATTaGTGCGATTGCTGTGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: VTVVKGKWVMLFRQVRVNEVTQH*CDCCGS Trigger: ACTGCCACAGCAATCGCATCAATGCTGAGTTACCTC...GTTCACCCTGACCTGCCTAAACAGCATCACCCACTTGCCTTTGACAACAGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149892.2 |
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| 3UTR-3UTR TCA 90 bp | GAGCAGCTCACTGAGCTCTCAACACTCAATGGCTTTTCTAGTCCAAAGTTCCCAAATGGTACACACGGGTaGGCAGAAGTCAGTACTGCG | + |
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Preference number: 2 (lower is better) Translates to: EQLTELSTLNGFSSPKFPNGTHG*AEVSTA Trigger: CGCAGTACTGACTTCTGCTCACCCGTGTGTACCATT...TGGGAACTTTGGACTAGAAAAGCCATTGAGTGTTGAGAGCTCAGTGAGCTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
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| 3UTR-3UTR CCA 90 bp | ATTGCTCCCTCTGGTTTGCTCAGCCTGCTTTCTTATAGAACCCAGGATCATCAGGAGTTGCTGCGGCTCTaGAAGCTTAGGGAAGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: IAPSGLLSLLSYRTQDHQELLRL*KLREGS Trigger: AGAACCTTCCCTAAGCTTCCAGAGCCGCAGCAACTC...CTGATGATCCTGGGTTCTATAAGAAAGCAGGCTGAGCAAACCAGAGGGAGCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
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| 3UTR CAA 90 bp | ATTCAGCTTACACTTGCACATTGCTGTTCATCACCAAAGGAAGTTTaGGACAGGAACTCAAACAGGGCAGAAACCTGGAGGCAGGAGCCG | + |
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Preference number: 2 (lower is better) Translates to: IQLTLAHCCSSPKEV*DRNSNRAETWRQEP Trigger: CGGCTCCTGCCTCCAGGTTTCTGCCCTGTTTGAGTTCCTGTCCAAAACTTCCTTTGGTGATGAACAGCAATGTGCAAGTGTAAGCTGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
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| 3UTR-3UTR GCA 90 bp | TACTTGATCCCCTCTTGTCAGTTCCTTCTTCCAGGGAAATACATCTGTGTAATTAGCAGAAGTCAGTACTaGGCAGCCTGTCCACCCGGG | + |
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Preference number: 2 (lower is better) Translates to: YLIPSCQFLLPGKYICVISRSQY*AACPPG Trigger: CCCGGGTGGACAGGCTGCGCAGTACTGACTTCTGCT...AATTACACAGATGTATTTCCCTGGAAGAAGGAACTGACAAGAGGGGATCAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
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| 3UTR-3UTR GCA 90 bp | GAGCAGCTCACTGAGCTCTCAACACTCAATGGCTTTTCTAGTCCAAAGTTCCCATGCTGCTTACTGGATTaGTCCCTCTGGTTTGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: EQLTELSTLNGFSSPKFPCCLLD*SLWFAQ Trigger: CTGAGCAAACCAGAGGGAGCAATCCAGTAAGCAGCA...TGGGAACTTTGGACTAGAAAAGCCATTGAGTGTTGAGAGCTCAGTGAGCTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
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| 3UTR-3UTR CCA 90 bp | GCAATCCCAGAACCCTCCTTCAAGACCCGGGTAAGTTGGTACATCGTGAATTTCCCTGGTAAGTTACAGTaGGTGCTGGACTTTACACGT | + |
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Preference number: 2 (lower is better) Translates to: AIPEPSFKTRVSWYIVNFPGKLQ*VLDFTR Trigger: ACGTGTAAAGTCCAGCACCCACTGTAACTTACCAGG...GAAATTCACGATGTACCAACTTACCCGGGTCTTGAAGGAGGGTTCTGGGATTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
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| 3UTR-3UTR CCA 90 bp | TACTTGATCCCCTCTTGTCAGTTCCTTCTTCCAGGGAAATACATCTGTGTAATTCCACCCACAGTGGGCTaGGCCCTCCCCTATCAATCA | + |
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Preference number: 2 (lower is better) Translates to: YLIPSCQFLLPGKYICVIPPTVG*ALPYQS Trigger: TGATTGATAGGGGAGGGCCCAGCCCACTGTGGGTGG...AATTACACAGATGTATTTCCCTGGAAGAAGGAACTGACAAGAGGGGATCAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
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| 3UTR CAA 90 bp | AATGCATGGGTAGAGCAGTTGTTTGCTGGAGGGGAAGCCACACAGTaGAGACAGGTGACTGATACAATGGACTGGAAATGTCTTCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: NAWVEQLFAGGEATQ*RQVTDTMDWKCLQV Trigger: CACTTGAAGACATTTCCAGTCCATTGTATCAGTCACCTGTCTCAACTGTGTGGCTTCCCCTCCAGCAAACAACTGCTCTACCCATGCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
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| 3UTR-3UTR GCA 90 bp | TACGGTCCCTTTAAAGTCCTACAAGTCTGTCTTCTTAAACCGAGACGACCACGTGCACCCAAGCAAAGGTaGACTACTAAAGTACGGTCC | + |
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Preference number: 2 (lower is better) Translates to: YGPFKVLQVCLLKPRRPRAPKQR*TTKVRS Trigger: GGACCGTACTTTAGTAGTGCACCTTTGCTTGGGTGC...ACGTGGTCGTCTCGGTTTAAGAAGACAGACTTGTAGGACTTTAAAGGGACCGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149892.2 |
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| 3UTR-3UTR GCA 90 bp | CATGAATATATGATCCAGAGTAAGACCTGGCCCTTAGGCCACACGAATTTAAATGGCCCACTGGCTGCCTaGCCCTGTGAAGTTTTCATC | + |
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Preference number: 2 (lower is better) Translates to: HEYMIQSKTWPLGHTNLNGPLAA*PCEVFI Trigger: GATGAAAACTTCACAGGGGCAGGCAGCCAGTGGGCC...ATTTAAATTCGTGTGGCCTAAGGGCCAGGTCTTACTCTGGATCATATATTCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
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| 3UTR-3UTR GCA 90 bp | CTTGACGATCCAAAGGCATTTACTTCTTTGGGGCCATCTCTATACATTCTCCATGGTAGAGCAGTTGTTTaGTGGAGGGGAAGCCACACA | + |
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Preference number: 2 (lower is better) Translates to: LDDPKAFTSLGPSLYILHGRAVV*WRGSHT Trigger: TGTGTGGCTTCCCCTCCAGCAAACAACTGCTCTACC...ATGGAGAATGTATAGAGATGGCCCCAAAGAAGTAAATGCCTTTGGATCGTCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
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| 3UTR-3UTR TCA 90 bp | CATGAATATATGATCCAGAGTAAGACCTGGCCCTTAGGCCACACGAATTTAAATATCGTGAATTTCTGGTaGGAGGTGCGTCTGCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: HEYMIQSKTWPLGHTNLNIVNFW*EVRLQV Trigger: CACCTGCAGACGCACCTCTCACCAGAAATTCACGAT...ATTTAAATTCGTGTGGCCTAAGGGCCAGGTCTTACTCTGGATCATATATTCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
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| 3UTR-3UTR TCA 90 bp | CGACCCAGGAAGGCACCAGTTGAACCAAGACAACTCTGTATGATAAAATGTGACCAGCGTCTACTTGACTaGCATGCACTGGTGTTAAAA | + |
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Preference number: 2 (lower is better) Translates to: RPRKAPVEPRQLCMIKCDQRLLD*HALVLK Trigger: TTTTAACACCAGTGCATGTCAGTCAAGTAGACGCTG...GTCACATTTTATCATACAGAGTTGTCTTGGTTCAACTGGTGCCTTCCTGGGTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149892.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGACGATCCAAAGGCATTTACTTCTTTGGGGCCATCTCTATACATTCTCCATGCACCCAAGCAAAGGTaGACTACTAAAGTACGGTCC | + |
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Preference number: 2 (lower is better) Translates to: LDDPKAFTSLGPSLYILHAPKQR*TTKVRS Trigger: GGACCGTACTTTAGTAGTGCACCTTTGCTTGGGTGC...ATGGAGAATGTATAGAGATGGCCCCAAAGAAGTAAATGCCTTTGGATCGTCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
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| 3UTR-3UTR GCA 90 bp | CATGAATATATGATCCAGAGTAAGACCTGGCCCTTAGGCCACACGAATTTAAATCCGCCAACACAGCTGTaGTGTCCACAGAGTTTTCAC | + |
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Preference number: 2 (lower is better) Translates to: HEYMIQSKTWPLGHTNLNPPTQL*CPQSFH Trigger: GTGAAAACTCTGTGGACAGCACAGCTGTGTTGGCGG...ATTTAAATTCGTGTGGCCTAAGGGCCAGGTCTTACTCTGGATCATATATTCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
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| 3UTR-3UTR CCA 90 bp | CTTGACGATCCAAAGGCATTTACTTCTTTGGGGCCATCTCTATACATTCTCCATAGTTACAGTGGGTGCTaGACTTTACACGTGTGCCAC | + |
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Preference number: 2 (lower is better) Translates to: LDDPKAFTSLGPSLYILHSYSGC*TLHVCH Trigger: GTGGCACACGTGTAAAGTCCAGCACCCACTGTAACT...ATGGAGAATGTATAGAGATGGCCCCAAAGAAGTAAATGCCTTTGGATCGTCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
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| 3UTR CAA 90 bp | AGCAGATACTACAGAGGACTTGACGATCCAAAGGCATTTACTTCTTaGGGGCCATCTCTATACATTCTCCATACAGAGCTTGGATTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: SRYYRGLDDPKAFTS*GPSLYILHTELGLV Trigger: CACCAATCCAAGCTCTGTATGGAGAATGTATAGAGATGGCCCCAAAGAAGTAAATGCCTTTGGATCGTCAAGTCCTCTGTAGTATCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR-3UTR GCA 90 bp | GAGCAGCTCACTGAGCTCTCAACACTCAATGGCTTTTCTAGTCCAAAGTTCCCATATTCAGCTTACACTTaGACATTGCTGTTCATCACC | + |
|
Preference number: 2 (lower is better) Translates to: EQLTELSTLNGFSSPKFPYSAYT*TLLFIT Trigger: GGTGATGAACAGCAATGTGCAAGTGTAAGCTGAATA...TGGGAACTTTGGACTAGAAAAGCCATTGAGTGTTGAGAGCTCAGTGAGCTGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR CAA 90 bp | AGACAAGTTGGGGAGGAAAGGGTTTATTCAGCTTACACTTGCACATaGCTGTTCATCACCAAAGGAAGTTTTGGACAGGAACTCAAACAG | + |
|
Preference number: 2 (lower is better) Translates to: RQVGEERVYSAYTCT*LFITKGSFGQELKQ Trigger: CTGTTTGAGTTCCTGTCCAAAACTTCCTTTGGTGATGAACAGCAATGTGCAAGTGTAAGCTGAATAAACCCTTTCCTCCCCAACTTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR-3UTR CCA 90 bp | CTTGACGATCCAAAGGCATTTACTTCTTTGGGGCCATCTCTATACATTCTCCATAAGACCCGGGTAAGTTaGTACATCGTGAATTTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: LDDPKAFTSLGPSLYILHKTRVS*YIVNFW Trigger: CCAGAAATTCACGATGTACCAACTTACCCGGGTCTT...ATGGAGAATGTATAGAGATGGCCCCAAAGAAGTAAATGCCTTTGGATCGTCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR CAA 90 bp | AGAATTCATATAGCAAACAGACCCGTTGAGTATTTAAATTTCCCTTaGAAACTTCACAAGGCAGGCCTCCATCTTCTGCACTGCTCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: RIHIANRPVEYLNFP*KLHKAGLHLLHCSQ Trigger: TTGGGAGCAGTGCAGAAGATGGAGGCCTGCCTTGTGAAGTTTCAAAGGGAAATTTAAATACTCAACGGGTCTGTTTGCTATATGAATTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR-3UTR TCA 90 bp | TACTTGATCCCCTCTTGTCAGTTCCTTCTTCCAGGGAAATACATCTGTGTAATTAGGCTTCTTCCAGTATaGAACAAGGGCAAACCTAGT | + |
|
Preference number: 2 (lower is better) Translates to: YLIPSCQFLLPGKYICVIRLLPV*NKGKPS Trigger: ACTAGGTTTGCCCTTGTTTCATACTGGAAGAAGCCT...AATTACACAGATGTATTTCCCTGGAAGAAGGAACTGACAAGAGGGGATCAAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR CAA 90 bp | AGTGCCCTGCCACTTCTGCATCTTTGGACTCAATCCACTGCAGATTaGAGATTTTTGGACAATAGTACAATTGAAATGAGCATGTACAGA | + |
|
Preference number: 2 (lower is better) Translates to: SALPLLHLWTQSTAD*RFLDNSTIEMSMYR Trigger: TCTGTACATGCTCATTTCAATTGTACTATTGTCCAAAAATCTCAAATCTGCAGTGGATTGAGTCCAAAGATGCAGAAGTGGCAGGGCACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR CAA 90 bp | TTAAGTCCAGAACTCCAGACCAGCCAGCAAACACACCAAGTGGTATaGCGTATGCTAAAGCAATCATCAAAAACCTCAAATTGCTTAGTA | + |
|
Preference number: 2 (lower is better) Translates to: LSPELQTSQQTHQVV*RMLKQSSKTSNCLV Trigger: TACTAAGCAATTTGAGGTTTTTGATGATTGCTTTAGCATACGCAATACCACTTGGTGTGTTTGCTGGCTGGTCTGGAGTTCTGGACTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149892.2 |
||
| 3UTR-3UTR TCA 90 bp | CATGAATATATGATCCAGAGTAAGACCTGGCCCTTAGGCCACACGAATTTAAATGGAAATGTCTTCAAGTaGTTAGCTATTTTTAGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: HEYMIQSKTWPLGHTNLNGNVFK*LAIFRS Trigger: GGACCTAAAAATAGCTAATCACTTGAAGACATTTCC...ATTTAAATTCGTGTGGCCTAAGGGCCAGGTCTTACTCTGGATCATATATTCATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR CCA 72 bp | TGCTACTCTCCGCAGCGAGAAGGGGTGCCGTCCCGTTaGGAGCTGGAACAACCAGGGGCCCGACGAGAAACG | + |
|
Preference number: 3 (lower is better) Translates to: CYSPQREGVPSR*ELEQPGARRET Trigger: CGTTTCTCGTCGGGCCCCTGGTTGTTCCAGCTCCCAACGGGACGGCACCCCTTCTCGCTGCGGAGAGTAGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149892.2 |
||
| 3UTR GCA 72 bp | AATATGAGCCCTGCTACTCTCCGCAGCGAGAAGGGGTaGCGTCCCGTTGGGAGCTGGAACAACCAGGGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: NMSPATLRSEKG*RPVGSWNNQGP Trigger: GGGCCCCTGGTTGTTCCAGCTCCCAACGGGACGGCACCCCTTCTCGCTGCGGAGAGTAGCAGGGCTCATATT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149892.2 |
||
| 3UTR TCA 72 bp | GAGGTGCGTCTGCAGGTGTGCAATGGTACACACGGGTaGGCAGAAGTCAGTACTGCGCAGCCTGTCCACCCG | + |
|
Preference number: 3 (lower is better) Translates to: EVRLQVCNGTHG*AEVSTAQPVHP Trigger: CGGGTGGACAGGCTGCGCAGTACTGACTTCTGCTCACCCGTGTGTACCATTGCACACCTGCAGACGCACCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR CCA 72 bp | TCGATGCGGGTCAGACCCTGCCCTTCTTACACTCGGTaGCGGTCTATGTACCACCAGCCCCTCCCTTCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SMRVRPCPSYTR*RSMYHQPLPSG Trigger: TCCAGAAGGGAGGGGCTGGTGGTACATAGACCGCCACCGAGTGTAAGAAGGGCAGGGTCTGACCCGCATCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR-3UTR CAA 90 bp | ACTCTCCGCAGCGAGAAGGGGTGCCGTCCCGTTGGGAGCTGGAACAACCAGGGGTCGCCTTTTCTCCCATaGCATGTGCACCCAAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: TLRSEKGCRPVGSWNNQGSPFLP*HVHPSK Trigger: TTTGCTTGGGTGCACATGCAATGGGAGAAAAGGCGA...CCCCTGGTTGTTCCAGCTCCCAACGGGACGGCACCCCTTCTCGCTGCGGAGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000149892.2 |
||
| 3UTR GCA 72 bp | GGGTACAGTGCACATGGGGGTGACCAACTCGGGCAGTaGGTCCTGTGTGAGCTGTCACAGCTCCACACAAGA | + |
|
Preference number: 3 (lower is better) Translates to: GYSAHGGDQLGQ*VLCELSQLHTR Trigger: TCTTGTGTGGAGCTGTGACAGCTCACACAGGACGCACTGCCCGAGTTGGTCACCCCCATGTGCACTGTACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023554.9 ENSMUST00000149892.2 |
||
| 3UTR CCA 72 bp | TCGCTCGTCAGCAGAGAACCACGTCGTAGAGAGGAATaGCGCCGCATTCATGACAGTCGGACCTGCCAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: SLVSREPRRREE*RRIHDSRTCQS Trigger: GGACTGGCAGGTCCGACTGTCATGAATGCGGCGCCATTCCTCTCTACGACGTGGTTCTCTGCTGACGAGCGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149892.2 |
||
| 3UTR GCA 72 bp | GTAACACCACCCAACACTCTCCACACTCCTCCCCTCTaGTTCCTCTCTCCTCCTCAAATGGGAGGGGGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: VTPPNTLHTPPL*FLSPPQMGGGG Trigger: ACCACCCCCTCCCATTTGAGGAGGAGAGAGGAAGCAGAGGGGAGGAGTGTGGAGAGTGTTGGGTGGTGTTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR GCA 72 bp | GAGGCAGGAGCCGATGCAGAAGCCATGGAGGAGTGCTaGTTACTGGATTGCTCCCTCTGGTTTGCTCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: EAGADAEAMEEC*LLDCSLWFAQP Trigger: AGGCTGAGCAAACCAGAGGGAGCAATCCAGTAAGCAGCACTCCTCCATGGCTTCTGCATCGGCTCCTGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR GCA 72 bp | CTGGAGGCAGGAGCCGATGCAGAAGCCATGGAGGAGTaGTGCTTACTGGATTGCTCCCTCTGGTTTGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LEAGADAEAMEE*CLLDCSLWFAQ Trigger: CTGAGCAAACCAGAGGGAGCAATCCAGTAAGCAGCACTCCTCCATGGCTTCTGCATCGGCTCCTGCCTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR CCA 72 bp | GCAGAAACCTGGAGGCAGGAGCCGATGCAGAAGCCATaGAGGAGTGCTGCTTACTGGATTGCTCCCTCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: AETWRQEPMQKP*RSAAYWIAPSG Trigger: ACCAGAGGGAGCAATCCAGTAAGCAGCACTCCTCCATGGCTTCTGCATCGGCTCCTGCCTCCAGGTTTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR CCA 72 bp | CTCCACCGAGGTAACTCAGCATTGATGCGATTGCTGTaGCAGTGGCTCGCTCGTCAGCAGAGAACCACGTCG | + |
|
Preference number: 3 (lower is better) Translates to: LHRGNSALMRLL*QWLARQQRTTS Trigger: CGACGTGGTTCTCTGCTGACGAGCGAGCCACTGCCACAGCAATCGCATCAATGCTGAGTTACCTCGGTGGAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149892.2 |
||
| 3UTR GCA 72 bp | GCGTCCTGTGTGAGCTGTCACAGCTCCACACAAGAGTaGCGCCAACACAGCTGTGCTGTCCACAGAGTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: ASCVSCHSSTQE*RQHSCAVHRVF Trigger: GAAAACTCTGTGGACAGCACAGCTGTGTTGGCGGCACTCTTGTGTGGAGCTGTGACAGCTCACACAGGACGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023554.9 ENSMUST00000149892.2 |
||
| 3UTR GCA 72 bp | GGGAGGGGTCATCTTCATAGGACCACCCATGCTTCTTaGCGTAGTTCAGCTCATCAGTGGGTCAGCACGGGT | + |
|
Preference number: 3 (lower is better) Translates to: GRGHLHRTTHAS*RSSAHQWVSTG Trigger: ACCCGTGCTGACCCACTGATGAGCTGAACTACGGCAAGAAGCATGGGTGGTCCTATGAAGATGACCCCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR CCA 72 bp | GCACGAGACTGGGCTGTAAGGAGAACTGGCTGGCAATaGAGTTGCTGCGGCTCTGGAAGCTTAGGGAAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: ARDWAVRRTGWQ*SCCGSGSLGKV Trigger: AACCTTCCCTAAGCTTCCAGAGCCGCAGCAACTCCATTGCCAGCCAGTTCTCCTTACAGCCCAGTCTCGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR GCA 72 bp | GACTGGGCTGTAAGGAGAACTGGCTGGCAATGGAGTTaGTGCGGCTCTGGAAGCTTAGGGAAGGTTCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: DWAVRRTGWQWS*CGSGSLGKVLS Trigger: AGACAGAACCTTCCCTAAGCTTCCAGAGCCGCAGCAACTCCATTGCCAGCCAGTTCTCCTTACAGCCCAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR CCA 72 bp | GAGCCGATGCAGAAGCCATGGAGGAGTGCTGCTTACTaGATTGCTCCCTCTGGTTTGCTCAGCCTGCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: EPMQKPWRSAAY*IAPSGLLSLLS Trigger: AGAAAGCAGGCTGAGCAAACCAGAGGGAGCAATCCAGTAAGCAGCACTCCTCCATGGCTTCTGCATCGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR GCA 72 bp | TGGGCTGTAAGGAGAACTGGCTGGCAATGGAGTTGCTaGGGCTCTGGAAGCTTAGGGAAGGTTCTGTCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: WAVRRTGWQWSC*GSGSLGKVLSK Trigger: CTTAGACAGAACCTTCCCTAAGCTTCCAGAGCCGCAGCAACTCCATTGCCAGCCAGTTCTCCTTACAGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR CCA 72 bp | GAAGTTTTGGACAGGAACTCAAACAGGGCAGAAACCTaGAGGCAGGAGCCGATGCAGAAGCCATGGAGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: EVLDRNSNRAET*RQEPMQKPWRS Trigger: ACTCCTCCATGGCTTCTGCATCGGCTCCTGCCTCCAGGTTTCTGCCCTGTTTGAGTTCCTGTCCAAAACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR GCA 72 bp | CTGCTTACTGGATTGCTCCCTCTGGTTTGCTCAGCCTaGTTTCTTATAGAACCCAGGATCATCAGCCCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LLTGLLPLVCSA*FLIEPRIISPR Trigger: CCTTGGGCTGATGATCCTGGGTTCTATAAGAAAGCAGGCTGAGCAAACCAGAGGGAGCAATCCAGTAAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR CCA 72 bp | CCCTCTGACTTCACAATTTTGAGCCTCAGAAGATACTaGGCAATCCCAGAACCCTCCTTCAAGACCCGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: PSDFTILSLRRY*AIPEPSFKTRV Trigger: TACCCGGGTCTTGAAGGAGGGTTCTGGGATTGCCCAGTATCTTCTGAGGCTCAAAATTGTGAAGTCAGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR TCA 72 bp | GTGGGTGCTGGACTTTACACGTGTGCCACACACGTCTaGAGACACACATGCTTCATGTGGTTCTCAGTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: VGAGLYTCATHV*RHTCFMWFSVH Trigger: ATGAACTGAGAACCACATGAAGCATGTGTGTCTTCAGACGTGTGTGGCACACGTGTAAAGTCCAGCACCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR GCA 72 bp | CTGGTAAGTTACAGTGGGTGCTGGACTTTACACGTGTaGCACACACGTCTGAAGACACACATGCTTCATGTG | + |
|
Preference number: 3 (lower is better) Translates to: LVSYSGCWTLHV*HTRLKTHMLHV Trigger: CACATGAAGCATGTGTGTCTTCAGACGTGTGTGGCACACGTGTAAAGTCCAGCACCCACTGTAACTTACCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR-3UTR CAA 90 bp | ATTGCTCCCTCTGGTTTGCTCAGCCTGCTTTCTTATAGAACCCAGGATCATCAGTCGCCTTTTCTCCCATaGCATGTGCACCCAAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: IAPSGLLSLLSYRTQDHQSPFLP*HVHPSK Trigger: TTTGCTTGGGTGCACATGCAATGGGAGAAAAGGCGA...CTGATGATCCTGGGTTCTATAAGAAAGCAGGCTGAGCAAACCAGAGGGAGCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR TCA 72 bp | AACTCTGAGGACTTTCCCCCTCTGACTTCACAATTTTaGGCCTCAGAAGATACTGGGCAATCCCAGAACCCT | + |
|
Preference number: 3 (lower is better) Translates to: NSEDFPPLTSQF*ASEDTGQSQNP Trigger: AGGGTTCTGGGATTGCCCAGTATCTTCTGAGGCTCAAAATTGTGAAGTCAGAGGGGGAAAGTCCTCAGAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR TCA 72 bp | GTGTGTGGAGGCGATAAGCAGATACTACAGAGGACTTaGCGATCCAAAGGCATTTACTTCTTTGGGGCCATC | + |
|
Preference number: 3 (lower is better) Translates to: VCGGDKQILQRT*RSKGIYFFGAI Trigger: GATGGCCCCAAAGAAGTAAATGCCTTTGGATCGTCAAGTCCTCTGTAGTATCTGCTTATCGCCTCCACACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGCAGCTCACTGAGCTCTCAACACTCAATGGCTTTTCTAGTCCAAAGTTCCCAGCCATACCTCACTTCTaGTACCAACTTGTCTTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: EQLTELSTLNGFSSPKFPAIPHF*YQLVLG Trigger: CCCTAAGACAAGTTGGTACAAGAAGTGAGGTATGGC...TGGGAACTTTGGACTAGAAAAGCCATTGAGTGTTGAGAGCTCAGTGAGCTGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR CCA 72 bp | ATTGCTGCAACGGAACACCGTGACCAAAAGACAAGTTaGGGAGGAAAGGGTTTATTCAGCTTACACTTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: IAATEHRDQKTS*GGKGLFSLHLH Trigger: GTGCAAGTGTAAGCTGAATAAACCCTTTCCTCCCCAACTTGTCTTTTGGTCACGGTGTTCCGTTGCAGCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR CCA 72 bp | CCTTGTCACCATAGTGCCCTGCCACTTCTGCATCTTTaGACTCAATCCACTGCAGATTTGAGATTTTTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: PCHHSALPLLHL*TQSTADLRFLD Trigger: GTCCAAAAATCTCAAATCTGCAGTGGATTGAGTCCAAAGATGCAGAAGTGGCAGGGCACTATGGTGACAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR-3UTR CAA 90 bp | TACTTGATCCCCTCTTGTCAGTTCCTTCTTCCAGGGAAATACATCTGTGTAATTGGGGAAGCCACACAGTaGAGACAGGTGACTGATACA | + |
|
Preference number: 3 (lower is better) Translates to: YLIPSCQFLLPGKYICVIGEATQ*RQVTDT Trigger: TGTATCAGTCACCTGTCTCAACTGTGTGGCTTCCCC...AATTACACAGATGTATTTCCCTGGAAGAAGGAACTGACAAGAGGGGATCAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR CCA 72 bp | CATCTCTATACATTCTCCATACAGAGCTTGGATTGGTaGAGGGCTAAGGCTTCTTCCAGTATGAAACAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: HLYTFSIQSLDW*RAKASSSMKQG Trigger: CCCTTGTTTCATACTGGAAGAAGCCTTAGCCCTCCACCAATCCAAGCTCTGTATGGAGAATGTATAGAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR CCA 72 bp | GGCCATCTCTATACATTCTCCATACAGAGCTTGGATTaGTGGAGGGCTAAGGCTTCTTCCAGTATGAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: GHLYTFSIQSLD*WRAKASSSMKQ Trigger: TTGTTTCATACTGGAAGAAGCCTTAGCCCTCCACCAATCCAAGCTCTGTATGGAGAATGTATAGAGATGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR GCA 72 bp | GGGAGGAAAGGGTTTATTCAGCTTACACTTGCACATTaGTGTTCATCACCAAAGGAAGTTTTGGACAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: GRKGFIQLTLAH*CSSPKEVLDRN Trigger: GTTCCTGTCCAAAACTTCCTTTGGTGATGAACAGCAATGTGCAAGTGTAAGCTGAATAAACCCTTTCCTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR CCA 72 bp | TTTTCTCAGTTGAGATTCCTTCCTTTCGGAGGATACTaGTTTGTGTCAGGTTGGCACAGGATTATCCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: FSQLRFLPFGGY*FVSGWHRIIQQ Trigger: TTGCTGGATAATCCTGTGCCAACCTGACACAAACCAGTATCCTCCGAAAGGAAGGAATCTCAACTGAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR CCA 72 bp | ACAGAGGACTTGACGATCCAAAGGCATTTACTTCTTTaGGGCCATCTCTATACATTCTCCATACAGAGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: TEDLTIQRHLLL*GHLYTFSIQSL Trigger: CAAGCTCTGTATGGAGAATGTATAGAGATGGCCCCAAAGAAGTAAATGCCTTTGGATCGTCAAGTCCTCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR GCA 72 bp | CAAGTTGGGGAGGAAAGGGTTTATTCAGCTTACACTTaGACATTGCTGTTCATCACCAAAGGAAGTTTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: QVGEERVYSAYT*TLLFITKGSFG Trigger: TCCAAAACTTCCTTTGGTGATGAACAGCAATGTGCAAGTGTAAGCTGAATAAACCCTTTCCTCCCCAACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR CCA 72 bp | TGGGGAGTTAATCTCCTCAACTTTAAATCCCTTAGCTaGGATTCCCTCGTTAGACAGGCTTCATTAAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: WGVNLLNFKSLS*DSLVRQASLKT Trigger: TGTTTTTAATGAAGCCTGTCTAACGAGGGAATCCCAGCTAAGGGATTTAAAGTTGAGGAGATTAACTCCCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR-3UTR CAA 90 bp | TACTTGATCCCCTCTTGTCAGTTCCTTCTTCCAGGGAAATACATCTGTGTAATTTCTGACTTCACAATTTaGAGCCTCAGAAGATACTGG | + |
|
Preference number: 3 (lower is better) Translates to: YLIPSCQFLLPGKYICVISDFTI*SLRRYW Trigger: CCAGTATCTTCTGAGGCTCAAAATTGTGAAGTCAGA...AATTACACAGATGTATTTCCCTGGAAGAAGGAACTGACAAGAGGGGATCAAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR-3UTR CAA 90 bp | TACTTGATCCCCTCTTGTCAGTTCCTTCTTCCAGGGAAATACATCTGTGTAATTCAATCCACTGCAGATTaGAGATTTTTGGACAATAGT | + |
|
Preference number: 3 (lower is better) Translates to: YLIPSCQFLLPGKYICVIQSTAD*RFLDNS Trigger: ACTATTGTCCAAAAATCTCAAATCTGCAGTGGATTG...AATTACACAGATGTATTTCCCTGGAAGAAGGAACTGACAAGAGGGGATCAAGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR TCA 72 bp | ACTGGACGACAGAATTCATATAGCAAACAGACCCGTTaGGTATTTAAATTTCCCTTTGAAACTTCACAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: TGRQNSYSKQTR*VFKFPFETSQG Trigger: GCCTTGTGAAGTTTCAAAGGGAAATTTAAATACTCAACGGGTCTGTTTGCTATATGAATTCTGTCGTCCAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR TCA 72 bp | TGTCCTCACCAATTAATAATGCCTCGTGTTCATTTATaGGGACTGAATTATTCATCAGAACCTTTGCATAAG | + |
|
Preference number: 3 (lower is better) Translates to: CPHQLIMPRVHL*GLNYSSEPLHK Trigger: CTTATGCAAAGGTTCTGATGAATAATTCAGTCCTCATAAATGAACACGAGGCATTATTAATTGGTGAGGACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| CDS-3UTR GCA 90 bp | GCCATACTCACAGAAACAAGGGTGGGTGGGAAGGAGCCAGGGCCTGTTCCCAAGGGCCCCAGCAGCGGCTaGCGCTCCTCCTCCTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AILTETRVGGKEPGPVPKGPSSG*RSSSSL Trigger: CAGCGAGGAGGAGGAGCGGCAGCCGCTGCTGGGGCC...CTTGGGAACAGGCCCTGGCTCCTTCCCACCCACCCTTGTTTCTGTGAGTATGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR CAA 72 bp | CTGCTACTCTCCGCAGCGAGAAGGGGTGCCGTCCCGTaGGGAGCTGGAACAACCAGGGGCCCGACGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LLLSAARRGAVP*GAGTTRGPTRN Trigger: GTTTCTCGTCGGGCCCCTGGTTGTTCCAGCTCCCAACGGGACGGCACCCCTTCTCGCTGCGGAGAGTAGCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149892.2 |
||
| CDS-3UTR GCA 90 bp | CGACCCAGGAAGGCACCAGTTGAACCAAGACAACTCTGTATGATAAAATGTGACGGCCCCAGCAGCGGCTaGCGCTCCTCCTCCTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RPRKAPVEPRQLCMIKCDGPSSG*RSSSSL Trigger: CAGCGAGGAGGAGGAGCGGCAGCCGCTGCTGGGGCC...GTCACATTTTATCATACAGAGTTGTCTTGGTTCAACTGGTGCCTTCCTGGGTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149892.2 |
||
| CDS-3UTR CCA 90 bp | CGCCAACACAGCTGTGCTGTCCACAGAGTTTTCACATCCTCACGACACTCACGTGCGCCGAGTTCTGGATaGGGCCCCAGGTGTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RQHSCAVHRVFTSSRHSRAPSSG*GPRCSR Trigger: TCTGGAACACCTGGGGCCCCATCCAGAACTCGGCGC...ACGTGAGTGTCGTGAGGATGTGAAAACTCTGTGGACAGCACAGCTGTGTTGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023554.9 ENSMUST00000149892.2 |
||
| CDS-3UTR CCA 90 bp | CCACCCACAGTGGGCTGGGCCCTCCCCTATCAATCACTAATTAAGAAAATACCCTGGCGCGCCGAGTTCTaGATGGGGCCCCAGGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PPTVGWALPYQSLIKKIPWRAEF*MGPQVF Trigger: GAACACCTGGGGCCCCATCCAGAACTCGGCGCGCCA...GGGTATTTTCTTAATTAGTGATTGATAGGGGAGGGCCCAGCCCACTGTGGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| CDS-3UTR CCA 90 bp | CGCCAACACAGCTGTGCTGTCCACAGAGTTTTCACATCCTCACGACACTCACGTAGGGCAGGAAGCCTATaGGCCCCCAGAGGACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RQHSCAVHRVFTSSRHSRRAGSL*APRGPG Trigger: TCCTGGTCCTCTGGGGGCCCATAGGCTTCCTGCCCT...ACGTGAGTGTCGTGAGGATGTGAAAACTCTGTGGACAGCACAGCTGTGTTGGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023554.9 ENSMUST00000149892.2 |
||
| 3UTR CAA 72 bp | CACACGCTCCACCGAGGTAACTCAGCATTGATGCGATaGCTGTGGCAGTGGCTCGCTCGTCAGCAGAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: HTLHRGNSALMR*LWQWLARQQRT Trigger: GGTTCTCTGCTGACGAGCGAGCCACTGCCACAGCAATCGCATCAATGCTGAGTTACCTCGGTGGAGCGTGTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149892.2 |
||
| CDS-3UTR TCA 90 bp | TTTGGACAGGAACTCAAACAGGGCAGAAACCTGGAGGCAGGAGCCGATGCAGAATGTCCAGCAGCCACATaGACGCGAAGCAGGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FGQELKQGRNLEAGADAECPAAT*TRSRAG Trigger: TCCTGCCCTGCTTCGCGTTCATGTGGCTGCTGGACA...TTCTGCATCGGCTCCTGCCTCCAGGTTTCTGCCCTGTTTGAGTTCCTGTCCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| CDS-3UTR TCA 90 bp | GCCATACTCACAGAAACAAGGGTGGGTGGGAAGGAGCCAGGGCCTGTTCCCAAGCAGCCAGCGTCTACTTaGCTGACATGCACTGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: AILTETRVGGKEPGPVPKQPAST*LTCTGV Trigger: AACACCAGTGCATGTCAGTCAAGTAGACGCTGGCTG...CTTGGGAACAGGCCCTGGCTCCTTCCCACCCACCCTTGTTTCTGTGAGTATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| CDS-3UTR GCA 90 bp | ATTGCTCCCTCTGGTTTGCTCAGCCTGCTTTCTTATAGAACCCAGGATCATCAGCGCAGCGAGAAGGGGTaGCGTCCCGTTGGGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IAPSGLLSLLSYRTQDHQRSEKG*RPVGSW Trigger: CCAGCTCCCAACGGGACGGCACCCCTTCTCGCTGCG...CTGATGATCCTGGGTTCTATAAGAAAGCAGGCTGAGCAAACCAGAGGGAGCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| CDS-3UTR CCA 90 bp | CCACCCACAGTGGGCTGGGCCCTCCCCTATCAATCACTAATTAAGAAAATACCCAGGGCAGGAAGCCTATaGGCCCCCAGAGGACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PPTVGWALPYQSLIKKIPRAGSL*APRGPG Trigger: TCCTGGTCCTCTGGGGGCCCATAGGCTTCCTGCCCT...GGGTATTTTCTTAATTAGTGATTGATAGGGGAGGGCCCAGCCCACTGTGGGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| CDS-3UTR TCA 90 bp | GTCACTGTTGTCAAAGGCAAGTGGGTGATGCTGTTTAGGCAGGTCAGGGTGAACTGTCCAGCAGCCACATaGACGCGAAGCAGGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VTVVKGKWVMLFRQVRVNCPAAT*TRSRAG Trigger: TCCTGCCCTGCTTCGCGTTCATGTGGCTGCTGGACA...GTTCACCCTGACCTGCCTAAACAGCATCACCCACTTGCCTTTGACAACAGTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149892.2 |
||
| 3UTR CAA 72 bp | AGACTGGGCTGTAAGGAGAACTGGCTGGCAATGGAGTaGCTGCGGCTCTGGAAGCTTAGGGAAGGTTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RLGCKENWLAME*LRLWKLREGSV Trigger: GACAGAACCTTCCCTAAGCTTCCAGAGCCGCAGCAACTCCATTGCCAGCCAGTTCTCCTTACAGCCCAGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| CDS-3UTR TCA 90 bp | ATTGCTCCCTCTGGTTTGCTCAGCCTGCTTTCTTATAGAACCCAGGATCATCAGTTAGGCAGGTCAGGGTaGACCACGTGGACGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: IAPSGLLSLLSYRTQDHQLGRSG*TTWTTG Trigger: CCCTGTCGTCCACGTGGTTCACCCTGACCTGCCTAA...CTGATGATCCTGGGTTCTATAAGAAAGCAGGCTGAGCAAACCAGAGGGAGCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR CAA 72 bp | GGCAATCCCAGAACCCTCCTTCAAGACCCGGGTAAGTaGGTACATCGTGAATTTCTGGTGAGAGGTGCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GNPRTLLQDPGK*VHREFLVRGAS Trigger: AGACGCACCTCTCACCAGAAATTCACGATGTACCAACTTACCCGGGTCTTGAAGGAGGGTTCTGGGATTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| CDS-3UTR TCA 90 bp | AGCTCCACACAAGAGTGCCGCCAACACAGCTGTGCTGTCCACAGAGTTTTCACAGAGGTAACTCAGCATTaGTGCGATTGCTGTGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSTQECRQHSCAVHRVFTEVTQH*CDCCGS Trigger: ACTGCCACAGCAATCGCATCAATGCTGAGTTACCTC...TGTGAAAACTCTGTGGACAGCACAGCTGTGTTGGCGGCACTCTTGTGTGGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| CDS-3UTR CCA 90 bp | CCACCCACAGTGGGCTGGGCCCTCCCCTATCAATCACTAATTAAGAAAATACCCCGTCGTAGAGAGGAATaGCGCCGCATTCATGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: PPTVGWALPYQSLIKKIPRRREE*RRIHDS Trigger: ACTGTCATGAATGCGGCGCCATTCCTCTCTACGACG...GGGTATTTTCTTAATTAGTGATTGATAGGGGAGGGCCCAGCCCACTGTGGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| CDS-3UTR CCA 90 bp | AGCTCCACACAAGAGTGCCGCCAACACAGCTGTGCTGTCCACAGAGTTTTCACACACAGCCTCCAACTATaGACCAGAATCCAATCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSTQECRQHSCAVHRVFTHSLQL*TRIQSS Trigger: GCTGGATTGGATTCTGGTCCATAGTTGGAGGCTGTG...TGTGAAAACTCTGTGGACAGCACAGCTGTGTTGGCGGCACTCTTGTGTGGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| CDS-3UTR TCA 90 bp | CACAGCTGTGCTGTCCACAGAGTTTTCACATCCTCACGACACTCACGTCCTGCACAGGAAGGCACCAGTTaGACCAAGACAACTCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: HSCAVHRVFTSSRHSRPAQEGTS*TKTTLY Trigger: ATACAGAGTTGTCTTGGTTCAACTGGTGCCTTCCTG...TGCAGGACGTGAGTGTCGTGAGGATGTGAAAACTCTGTGGACAGCACAGCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| CDS-3UTR GCA 90 bp | AACCTGGTAAGTTACAGTGGGTGCTGGACTTTACACGTGTGCCACACACGTCTGACACTCCCAGGAGGATaGAGGAGGCATACAATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NLVSYSGCWTLHVCHTRLTLPGG*RRHTMS Trigger: TGACATTGTATGCCTCCTGCATCCTCCTGGGAGTGT...CAGACGTGTGTGGCACACGTGTAAAGTCCAGCACCCACTGTAACTTACCAGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| CDS-3UTR CCA 90 bp | CATGAATATATGATCCAGAGTAAGACCTGGCCCTTAGGCCACACGAATTTAAATGGGGTGCCGTCCCGTTaGGAGCTGGAACAACCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HEYMIQSKTWPLGHTNLNGVPSR*ELEQPG Trigger: CCCTGGTTGTTCCAGCTCCCAACGGGACGGCACCCC...ATTTAAATTCGTGTGGCCTAAGGGCCAGGTCTTACTCTGGATCATATATTCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| CDS-3UTR CCA 90 bp | CACAGCTGTGCTGTCCACAGAGTTTTCACATCCTCACGACACTCACGTCCTGCAGTTGTCAAAGGCAAGTaGGTGATGCTGTTTAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HSCAVHRVFTSSRHSRPAVVKGK*VMLFRQ Trigger: CTGCCTAAACAGCATCACCCACTTGCCTTTGACAAC...TGCAGGACGTGAGTGTCGTGAGGATGTGAAAACTCTGTGGACAGCACAGCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR CAA 72 bp | CGATGCAGAAGCCATGGAGGAGTGCTGCTTACTGGATaGCTCCCTCTGGTTTGCTCAGCCTGCTTTCTTATA | + |
|
Preference number: 4 (lower is better) Translates to: RCRSHGGVLLTG*LPLVCSACFLI Trigger: TATAAGAAAGCAGGCTGAGCAAACCAGAGGGAGCAATCCAGTAAGCAGCACTCCTCCATGGCTTCTGCATCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| CDS-3UTR TCA 90 bp | AACCTGGTAAGTTACAGTGGGTGCTGGACTTTACACGTGTGCCACACACGTCTGCAGCGTCTACTTGACTaGCATGCACTGGTGTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: NLVSYSGCWTLHVCHTRLQRLLD*HALVLK Trigger: TTTTAACACCAGTGCATGTCAGTCAAGTAGACGCTG...CAGACGTGTGTGGCACACGTGTAAAGTCCAGCACCCACTGTAACTTACCAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| CDS-3UTR GCA 90 bp | AGCTCCACACAAGAGTGCCGCCAACACAGCTGTGCTGTCCACAGAGTTTTCACAGACAACTCCAAATTCTaGATACAACACGGTCTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSTQECRQHSCAVHRVFTDNSKF*IQHGLD Trigger: ATCGAGACCGTGTTGTATGCAGAATTTGGAGTTGTC...TGTGAAAACTCTGTGGACAGCACAGCTGTGTTGGCGGCACTCTTGTGTGGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| CDS-3UTR CCA 90 bp | AACACACCAAGTGGTATTGCGTATGCTAAAGCAATCATCAAAAACCTCAAATTGTGGCGCGCCGAGTTCTaGATGGGGCCCCAGGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: NTPSGIAYAKAIIKNLKLWRAEF*MGPQVF Trigger: GAACACCTGGGGCCCCATCCAGAACTCGGCGCGCCA...CAATTTGAGGTTTTTGATGATTGCTTTAGCATACGCAATACCACTTGGTGTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000149892.2 |
||
| 3UTR CAA 72 bp | GTAGAGCAGTTGTTTGCTGGAGGGGAAGCCACACAGTaGAGACAGGTGACTGATACAATGGACTGGAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: VEQLFAGGEATQ*RQVTDTMDWKC Trigger: ACATTTCCAGTCCATTGTATCAGTCACCTGTCTCAACTGTGTGGCTTCCCCTCCAGCAAACAACTGCTCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR CAA 72 bp | AAGCACGGTCAGGTGGTCACAGCCATACCTCACTTCTaGTACCAACTTGTCTTAGGGTTTCTATTGCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KHGQVVTAIPHF*YQLVLGFLLLQ Trigger: TTGCAGCAATAGAAACCCTAAGACAAGTTGGTACAAGAAGTGAGGTATGGCTGTGACCACCTGACCGTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| CDS-3UTR TCA 90 bp | CATGAATATATGATCCAGAGTAAGACCTGGCCCTTAGGCCACACGAATTTAAATTCAAAGGCAAGTGGGTaGTGCTGTTTAGGCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HEYMIQSKTWPLGHTNLNSKASG*CCLGRS Trigger: TGACCTGCCTAAACAGCATCACCCACTTGCCTTTGA...ATTTAAATTCGTGTGGCCTAAGGGCCAGGTCTTACTCTGGATCATATATTCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| CDS-3UTR GCA 90 bp | ATGATCCAGAGTAAGACCTGGCCCTTAGGCCACACGAATTTAAATATGCAAAATAGAATATGGGGACGCTaGTGTTCAGGAACACTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: MIQSKTWPLGHTNLNMQNRIWGR*CSGTLP Trigger: TGGGAGTGTTCCTGAACAGCAGCGTCCCCATATTCT...ATTTTGCATATTTAAATTCGTGTGGCCTAAGGGCCAGGTCTTACTCTGGATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR CAA 72 bp | GGGGAGGAAAGGGTTTATTCAGCTTACACTTGCACATaGCTGTTCATCACCAAAGGAAGTTTTGGACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GEERVYSAYTCT*LFITKGSFGQE Trigger: TTCCTGTCCAAAACTTCCTTTGGTGATGAACAGCAATGTGCAAGTGTAAGCTGAATAAACCCTTTCCTCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR CAA 72 bp | ACAAGTTGGGGAGGAAAGGGTTTATTCAGCTTACACTaGCACATTGCTGTTCATCACCAAAGGAAGTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TSWGGKGLFSLH*HIAVHHQRKFW Trigger: CCAAAACTTCCTTTGGTGATGAACAGCAATGTGCAAGTGTAAGCTGAATAAACCCTTTCCTCCCCAACTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR CAA 72 bp | ATAGCAAACAGACCCGTTGAGTATTTAAATTTCCCTTaGAAACTTCACAAGGCAGGCCTCCATCTTCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: IANRPVEYLNFP*KLHKAGLHLLH Trigger: GTGCAGAAGATGGAGGCCTGCCTTGTGAAGTTTCAAAGGGAAATTTAAATACTCAACGGGTCTGTTTGCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR CAA 72 bp | TACAGAGGACTTGACGATCCAAAGGCATTTACTTCTTaGGGGCCATCTCTATACATTCTCCATACAGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: YRGLDDPKAFTS*GPSLYILHTEL Trigger: AAGCTCTGTATGGAGAATGTATAGAGATGGCCCCAAAGAAGTAAATGCCTTTGGATCGTCAAGTCCTCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| 3UTR CAA 72 bp | GAACTCCAGACCAGCCAGCAAACACACCAAGTGGTATaGCGTATGCTAAAGCAATCATCAAAAACCTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ELQTSQQTHQVV*RMLKQSSKTSN Trigger: ATTTGAGGTTTTTGATGATTGCTTTAGCATACGCAATACCACTTGGTGTGTTTGCTGGCTGGTCTGGAGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149892.2 |
||
| CDS-3UTR TCA 90 bp | ATGATCCAGAGTAAGACCTGGCCCTTAGGCCACACGAATTTAAATATGCAAAATTGTCATAGGATTCCCTaGAGCACAGAATCAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: MIQSKTWPLGHTNLNMQNCHRIP*STESEG Trigger: TCCTTCTGATTCTGTGCTTCAGGGAATCCTATGACA...ATTTTGCATATTTAAATTCGTGTGGCCTAAGGGCCAGGTCTTACTCTGGATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| CDS-3UTR GCA 90 bp | ATGATCCAGAGTAAGACCTGGCCCTTAGGCCACACGAATTTAAATATGCAAAATAGTCTGATACAGGTATaGATCGTAGACCAGTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: MIQSKTWPLGHTNLNMQNSLIQV*IVDQFP Trigger: TGGGAACTGGTCTACGATGCATACCTGTATCAGACT...ATTTTGCATATTTAAATTCGTGTGGCCTAAGGGCCAGGTCTTACTCTGGATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| CDS-3UTR CCA 90 bp | CATGAATATATGATCCAGAGTAAGACCTGGCCCTTAGGCCACACGAATTTAAATAGTATCTGTCCCCCATaGATTAGCCTTTTCTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HEYMIQSKTWPLGHTNLNSICPP*ISLFLR Trigger: CCTTAAGAAAAGGCTAATCCATGGGGGACAGATACT...ATTTAAATTCGTGTGGCCTAAGGGCCAGGTCTTACTCTGGATCATATATTCATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| CDS-3UTR CCA 90 bp | CATGAATATATGATCCAGAGTAAGACCTGGCCCTTAGGCCACACGAATTTAAATGAAAATAAGCTAGCGTaGCAGAGAATATTAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HEYMIQSKTWPLGHTNLNENKLA*QRILGR Trigger: TCTGCCTAATATTCTCTGCCACGCTAGCTTATTTTC...ATTTAAATTCGTGTGGCCTAAGGGCCAGGTCTTACTCTGGATCATATATTCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| CDS CCA 90 bp | CGCGCCGAGTTCTGGATGGGGCCCCAGGTGTTCCAGACCAGGCCCTaGGCGAACGCGAGGAGCGAGAAGAGCAGCAGCACCAGCCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RAEFWMGPQVFQTRP*ANARSEKSSSTSQR Trigger: CCGCTGGCTGGTGCTGCTGCTCTTCTCGCTCCTCGCGTTCGCCCAGGGCCTGGTCTGGAACACCTGGGGCCCCATCCAGAACTCGGCGCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023554.9 ENSMUST00000149892.2 |
||
| CDS CCA 90 bp | TGTCCCATCCGGAGAAGCCATAGGCCTGGCGCGCCGAGTTCTGGATaGGGCCCCAGGTGTTCCAGACCAGGCCCTGGGCGAACGCGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: CPIRRSHRPGAPSSG*GPRCSRPGPGRTRG Trigger: TCCTCGCGTTCGCCCAGGGCCTGGTCTGGAACACCTGGGGCCCCATCCAGAACTCGGCGCGCCAGGCCTATGGCTTCTCCGGATGGGACA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023554.9 ENSMUST00000149892.2 |
||
| CDS-3UTR CAA 90 bp | AGCTCCACACAAGAGTGCCGCCAACACAGCTGTGCTGTCCACAGAGTTTTCACAACCCGCAGACCTCTCTaGTCCAGCAGCCACATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SSTQECRQHSCAVHRVFTTRRPL*SSSHMN Trigger: GTTCATGTGGCTGCTGGACAAGAGAGGTCTGCGGGT...TGTGAAAACTCTGTGGACAGCACAGCTGTGTTGGCGGCACTCTTGTGTGGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| CDS-3UTR CAA 90 bp | GAGCAGCTCACTGAGCTCTCAACACTCAATGGCTTTTCTAGTCCAAAGTTCCCAAGGGGTGCCGTCCCGTaGGGAGCTGGAACAACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: EQLTELSTLNGFSSPKFPRGAVP*GAGTTR Trigger: CCTGGTTGTTCCAGCTCCCAACGGGACGGCACCCCT...TGGGAACTTTGGACTAGAAAAGCCATTGAGTGTTGAGAGCTCAGTGAGCTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| CDS-3UTR CAA 90 bp | AACCTGGTAAGTTACAGTGGGTGCTGGACTTTACACGTGTGCCACACACGTCTGTCAGCATTGATGCGATaGCTGTGGCAGTGGCTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: NLVSYSGCWTLHVCHTRLSALMR*LWQWLA Trigger: AGCGAGCCACTGCCACAGCAATCGCATCAATGCTGA...CAGACGTGTGTGGCACACGTGTAAAGTCCAGCACCCACTGTAACTTACCAGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| CDS-3UTR CAA 90 bp | CATGAATATATGATCCAGAGTAAGACCTGGCCCTTAGGCCACACGAATTTAAATCCAGGAAGGCACCAGTaGAACCAAGACAACTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: HEYMIQSKTWPLGHTNLNPGRHQ*NQDNSV Trigger: TACAGAGTTGTCTTGGTTCAACTGGTGCCTTCCTGG...ATTTAAATTCGTGTGGCCTAAGGGCCAGGTCTTACTCTGGATCATATATTCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| CDS-3UTR CAA 90 bp | CTTGACGATCCAAAGGCATTTACTTCTTTGGGGCCATCTCTATACATTCTCCATACACACCAAGTGGTATaGCGTATGCTAAAGCAATCA | + |
|
Preference number: 5 (lower is better) Translates to: LDDPKAFTSLGPSLYILHTHQVV*RMLKQS Trigger: TGATTGCTTTAGCATACGCAATACCACTTGGTGTGT...ATGGAGAATGTATAGAGATGGCCCCAAAGAAGTAAATGCCTTTGGATCGTCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
||
| CDS CCA 72 bp | CGGAGAAGCCATAGGCCTGGCGCGCCGAGTTCTGGATaGGGCCCCAGGTGTTCCAGACCAGGCCCTGGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: RRSHRPGAPSSG*GPRCSRPGPGR Trigger: TCGCCCAGGGCCTGGTCTGGAACACCTGGGGCCCCATCCAGAACTCGGCGCGCCAGGCCTATGGCTTCTCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023554.9 ENSMUST00000149892.2 |
||
| CDS CCA 72 bp | TTCTGGATGGGGCCCCAGGTGTTCCAGACCAGGCCCTaGGCGAACGCGAGGAGCGAGAAGAGCAGCAGCACC | + |
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Preference number: 6 (lower is better) Translates to: FWMGPQVFQTRP*ANARSEKSSST Trigger: GGTGCTGCTGCTCTTCTCGCTCCTCGCGTTCGCCCAGGGCCTGGTCTGGAACACCTGGGGCCCCATCCAGAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023554.9 ENSMUST00000149892.2 |
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| CDS CAA 90 bp | ACCATAAGAAATGACGTCAGAAGCACAGTGACCCGCAGACCTCTCTaGTCCAGCAGCCACATGAACGCGAAGCAGGGCAGGAAGCCTATG | + |
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Preference number: 6 (lower is better) Translates to: TIRNDVRSTVTRRPL*SSSHMNAKQGRKPM Trigger: CATAGGCTTCCTGCCCTGCTTCGCGTTCATGTGGCTGCTGGACAAGAGAGGTCTGCGGGTCACTGTGCTTCTGACGTCATTTCTTATGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
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| CDS CCA 72 bp | GTCGGACCTGCCAGTCCGTTCAGTATCTGTCCCCCATaGATTAGCCTTTTCTTAAGGGCTAAGTCTGATACA | + |
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Preference number: 6 (lower is better) Translates to: VGPASPFSICPP*ISLFLRAKSDT Trigger: TGTATCAGACTTAGCCCTTAAGAAAAGGCTAATCCATGGGGGACAGATACTGAACGGACTGGCAGGTCCGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023554.9 |
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