Pregenerated sensors for SLC47A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000010122Ensembl transcript IDs: ENSMUST00000010267.10, ENSMUST00000131723.8, ENSMUST00000148671.2
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTGGCCAGGGCGTTGACAAGGTTAGCTGCGATGCCCGTCATAATCTaGGGCAGAACGATGCCCACACGCTCTAGCAGACCAGCCAGCCCG | + |
|
Preference number: 1 (lower is better) Translates to: LARALTRLAAMPVII*GRTMPTRSSRPASP Trigger: CGGGCTGGCTGGTCTGCTAGAGCGTGTGGGCATCGTTCTGCCTCAGATTATGACGGGCATCGCAGCTAACCTTGTCAACGCCCTGGCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR GCA 90 bp | GTGATAGAGAAACACATAGTTGGCCAGGGCGTTGACAAGGTTAGCTaGGATGCCCGTCATAATCTGAGGCAGAACGATGCCCACACGCTC | + |
|
Preference number: 1 (lower is better) Translates to: VIEKHIVGQGVDKVS*DARHNLRQNDAHTL Trigger: GAGCGTGTGGGCATCGTTCTGCCTCAGATTATGACGGGCATCGCAGCTAACCTTGTCAACGCCCTGGCCAACTATGTGTTTCTCTATCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR TCA 90 bp | CGTTTCCAATTGAGCCGAGCAATAAAAGCCAGGAAGCACGTGGTCTaGCAGGTAGTGCAGATGATGATGCCTGACCACAGGCCGATCACT | + |
|
Preference number: 1 (lower is better) Translates to: RFQLSRAIKARKHVV*QVVQMMMPDHRPIT Trigger: AGTGATCGGCCTGTGGTCAGGCATCATCATCTGCACTACCTGTCAGACCACGTGCTTCCTGGCTTTTATTGCTCGGCTCAATTGGAAACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR GCA 90 bp | GCCCACCATAATCCAGGACCCAGTCCCAGCTCCTCCCAGCTACAATaGTCTAAATATAGGTCCTTCCGTCAGCCTCAGCTACTAGAGAAT | + |
|
Preference number: 1 (lower is better) Translates to: AHHNPGPSPSSSQLQ*SKYRSFRQPQLLEN Trigger: ATTCTCTAGTAGCTGAGGCTGACGGAAGGACCTATATTTAGAGCATTGTAGCTGGGAGGAGCTGGGACTGGGTCCTGGATTATGGTGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR CCA 90 bp | AAGAGCTCTGTGACTATCAAGGAAATAGCTGAGGACTTCTTGGCCTaGTCAATGTTTCCTGCGCCCAGTGCATTTCCCACCCGGACGTTG | + |
|
Preference number: 1 (lower is better) Translates to: KSSVTIKEIAEDFLA*SMFPAPSAFPTRTL Trigger: CAACGTCCGGGTGGGAAATGCACTGGGCGCAGGAAACATTGACCAGGCCAAGAAGTCCTCAGCTATTTCCTTGATAGTCACAGAGCTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR CCA 90 bp | TTCAAGATCCGTCATCATAATTTCTCCATGGCTCTCAGGACACACTaGGTGAGCAGGCTCGTGAGAGACAGCGGAATTCAGGGCCACGTT | + |
|
Preference number: 1 (lower is better) Translates to: FKIRHHNFSMALRTH*VSRLVRDSGIQGHV Trigger: AACGTGGCCCTGAATTCCGCTGTCTCTCACGAGCCTGCTCACCCAGTGTGTCCTGAGAGCCATGGAGAAATTATGATGACGGATCTTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR GCA 90 bp | TGGATTTGTTCAGCATTAACTTCACAGACTGAGGAGCACCCAAGTTaGTGGATTGATGGCATTCCCACATTATTCAATTCTGATATAGAC | + |
|
Preference number: 1 (lower is better) Translates to: WICSALTSQTEEHPS*WIDGIPTLFNSDID Trigger: GTCTATATCAGAATTGAATAATGTGGGAATGCCATCAATCCAGCAACTTGGGTGCTCCTCAGTCTGTGAAGTTAATGCTGAACAAATCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGACTTCTTGGCCTGGTCAATGTTTCCTGCGCCCAGTGCATTTCCCACCCGGATACCACTCAGGAAGCTaGCAACCTCATAGGCCCACC | + |
|
Preference number: 2 (lower is better) Translates to: RTSWPGQCFLRPVHFPPGYHSGS*QPHRPT Trigger: GGTGGGCCTATGAGGTTGGCAGCTTCCTGAGTGGTA...TCCGGGTGGGAAATGCACTGGGCGCAGGAAACATTGACCAGGCCAAGAAGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR-3UTR GCA 90 bp | GAATTCCAGCCCGGAATGAAGACAGTAGACAGCAGTGCATGTTTGACAGTGGCAGTAGCAGCCTGGCTCTaGTCAGCACTCCTGCCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: EFQPGMKTVDSSACLTVAVAAWL*SALLPG Trigger: CCCAGGCAGGAGTGCTGAGCAGAGCCAGGCTGCTAC...TGCCACTGTCAAACATGCACTGCTGTCTACTGTCTTCATTCCGGGCTGGAATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGACTTCTTGGCCTGGTCAATGTTTCCTGCGCCCAGTGCATTTCCCACCCGGACTCCCAACTCCACCATaGCAAGGATACCACTCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: RTSWPGQCFLRPVHFPPGLPTPP*QGYHSG Trigger: TCCTGAGTGGTATCCTTGGCATGGTGGAGTTGGGAG...TCCGGGTGGGAAATGCACTGGGCGCAGGAAACATTGACCAGGCCAAGAAGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTTGGAAACATGGGGACAGTGGCAGTGAGCTAGAGTCTCCAGGTGACTCCCTGGGGCCCAGAACATGCTaGACATATTGCTGTCTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: LWKHGDSGSELESPGDSLGPRTC*TYCCLQ Trigger: CTGCAGACAGCAATATGTTCAGCATGTTCTGGGCCC...CAGGGAGTCACCTGGAGACTCTAGCTCACTGCCACTGTCCCCATGTTTCCAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010267.10 ENSMUST00000131723.8 |
||
| 3UTR CAA 90 bp | GCCTGGTCAATGTTTCCTGCGCCCAGTGCATTTCCCACCCGGACGTaGGCAGCCACACTGAAGCCTGAAGGGATCATGTATACAATGATA | + |
|
Preference number: 2 (lower is better) Translates to: AWSMFPAPSAFPTRT*AATLKPEGIMYTMI Trigger: TATCATTGTATACATGATCCCTTCAGGCTTCAGTGTGGCTGCCAACGTCCGGGTGGGAAATGCACTGGGCGCAGGAAACATTGACCAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR-3UTR TCA 90 bp | GTAGAGGAACAGGAAAATGGCCAGGGCAAACTGGGAGATGGTGTTGGCCAATGCGGGCCCAGAACATGCTaGACATATTGCTGTCTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: VEEQENGQGKLGDGVGQCGPRTC*TYCCLQ Trigger: CTGCAGACAGCAATATGTTCAGCATGTTCTGGGCCC...GCATTGGCCAACACCATCTCCCAGTTTGCCCTGGCCATTTTCCTGTTCCTCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR-3UTR GCA 90 bp | AACATATTGCTGTCTGCAGTATCCCCAGCCCTGATGTTTCAATGTGGGGTGGATAAGGAGGCCCAGTCCTaGAGACACTCCCAGGACCAC | + |
|
Preference number: 2 (lower is better) Translates to: NILLSAVSPALMFQCGVDKEAQS*RHSQDH Trigger: GTGGTCCTGGGAGTGTCTGCAGGACTGGGCCTCCTT...ATCCACCCCACATTGAAACATCAGGGCTGGGGATACTGCAGACAGCAATATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGACTTCTTGGCCTGGTCAATGTTTCCTGCGCCCAGTGCATTTCCCACCCGGATGTGACACTATCCTTTaGAAACATGGGGACAGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: RTSWPGQCFLRPVHFPPGCDTIL*KHGDSG Trigger: GCCACTGTCCCCATGTTTCCAAAGGATAGTGTCACA...TCCGGGTGGGAAATGCACTGGGCGCAGGAAACATTGACCAGGCCAAGAAGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR CAA 90 bp | ACAGCAAAGAGCTCTGTGACTATCAAGGAAATAGCTGAGGACTTCTaGGCCTGGTCAATGTTTCCTGCGCCCAGTGCATTTCCCACCCGG | + |
|
Preference number: 2 (lower is better) Translates to: TAKSSVTIKEIAEDF*AWSMFPAPSAFPTR Trigger: CCGGGTGGGAAATGCACTGGGCGCAGGAAACATTGACCAGGCCAAGAAGTCCTCAGCTATTTCCTTGATAGTCACAGAGCTCTTTGCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR-3UTR TCA 90 bp | TCAGGATACCACCACAGGTACAAGCAAGACCTTCAAAGAGGTGGGACACAGCATCTGGGGACTGGTGTCTaGCATTTGCCATCTGGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: SGYHHRYKQDLQRGGTQHLGTGV*HLPSGK Trigger: CTTCCCAGATGGCAAATGTCAGACACCAGTCCCCAG...ATGCTGTGTCCCACCTCTTTGAAGGTCTTGCTTGTACCTGTGGTGGTATCCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR-3UTR TCA 90 bp | GTAGAGGAACAGGAAAATGGCCAGGGCAAACTGGGAGATGGTGTTGGCCAATGCATTAACTTCACAGACTaGGGAGCACCCAAGTTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: VEEQENGQGKLGDGVGQCINFTD*GAPKLL Trigger: CAGCAACTTGGGTGCTCCTCAGTCTGTGAAGTTAAT...GCATTGGCCAACACCATCTCCCAGTTTGCCCTGGCCATTTTCCTGTTCCTCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR-3UTR TCA 90 bp | ATGCTGAACATATTGCTGTCTGCAGTATCCCCAGCCCTGATGTTTCAATGTGGGCGTTGGCAGCCACACTaGAGCCTGAAGGGATCATGT | + |
|
Preference number: 2 (lower is better) Translates to: MLNILLSAVSPALMFQCGRWQPH*SLKGSC Trigger: ACATGATCCCTTCAGGCTTCAGTGTGGCTGCCAACG...CCCACATTGAAACATCAGGGCTGGGGATACTGCAGACAGCAATATGTTCAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR-3UTR TCA 90 bp | AACATATTGCTGTCTGCAGTATCCCCAGCCCTGATGTTTCAATGTGGGGTGGATAGGAAGCACGTGGTCTaGCAGGTAGTGCAGATGATG | + |
|
Preference number: 2 (lower is better) Translates to: NILLSAVSPALMFQCGVDRKHVV*QVVQMM Trigger: CATCATCTGCACTACCTGTCAGACCACGTGCTTCCT...ATCCACCCCACATTGAAACATCAGGGCTGGGGATACTGCAGACAGCAATATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR-3UTR GCA 90 bp | CATGCTGAACATATTGCTGTCTGCAGTATCCCCAGCCCTGATGTTTCAATGTGGGAGGAGCACCCAAGTTaGTGGATTGATGGCATTCCC | + |
|
Preference number: 2 (lower is better) Translates to: HAEHIAVCSIPSPDVSMWEEHPS*WIDGIP Trigger: GGGAATGCCATCAATCCAGCAACTTGGGTGCTCCTC...CCACATTGAAACATCAGGGCTGGGGATACTGCAGACAGCAATATGTTCAGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010267.10 ENSMUST00000131723.8 |
||
| 3UTR-3UTR GCA 90 bp | AACATATTGCTGTCTGCAGTATCCCCAGCCCTGATGTTTCAATGTGGGGTGGATGAGGAGCACCCAAGTTaGTGGATTGATGGCATTCCC | + |
|
Preference number: 2 (lower is better) Translates to: NILLSAVSPALMFQCGVDEEHPS*WIDGIP Trigger: GGGAATGCCATCAATCCAGCAACTTGGGTGCTCCTC...ATCCACCCCACATTGAAACATCAGGGCTGGGGATACTGCAGACAGCAATATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010267.10 ENSMUST00000131723.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGAACAGGAAAATGGCCAGGGCAAACTGGGAGATGGTGTTGGCCAATGCTGAACTGCAATCCCAGGGGTaGAAAATCAACATTCCGGTT | + |
|
Preference number: 2 (lower is better) Translates to: RNRKMARANWEMVLANAELQSQG*KINIPV Trigger: AACCGGAATGTTGATTTTGCACCCCTGGGATTGCAG...TTCAGCATTGGCCAACACCATCTCCCAGTTTGCCCTGGCCATTTTCCTGTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR-3UTR GCA 90 bp | GTAAGTATATTGCAGGCATTGTCCACTCCAGAGCATCTCCTCTGCCTCTGTCTCCTGGTGTCTGACATTTaGCATCTGGGAAGACTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: VSILQALSTPEHLLCLCLLVSDI*HLGRLQ Trigger: CTGGAGTCTTCCCAGATGGCAAATGTCAGACACCAG...GAGACAGAGGCAGAGGAGATGCTCTGGAGTGGACAATGCCTGCAATATACTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR-3UTR CCA 90 bp | AACATATTGCTGTCTGCAGTATCCCCAGCCCTGATGTTTCAATGTGGGGTGGATCTGACATTTGCCATCTaGGAAGACTCCAGAGCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: NILLSAVSPALMFQCGVDLTFAI*EDSRAP Trigger: TGGGGCTCTGGAGTCTTCCCAGATGGCAAATGTCAG...ATCCACCCCACATTGAAACATCAGGGCTGGGGATACTGCAGACAGCAATATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR CAA 90 bp | GACAGCGGAATTCAGGGCCACGTTTACCTTCAAATTGGCATGTACTaGAGCCTGTTGACAGGCGCGTTTCCAATTGAGCCGAGCAATAAA | + |
|
Preference number: 2 (lower is better) Translates to: DSGIQGHVYLQIGMY*SLLTGAFPIEPSNK Trigger: TTTATTGCTCGGCTCAATTGGAAACGCGCCTGTCAACAGGCTCAAGTACATGCCAATTTGAAGGTAAACGTGGCCCTGAATTCCGCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR-3UTR GCA 90 bp | AGAGACAGCGGAATTCAGGGCCACGTTTACCTTCAAATTGGCATGTACTTGAGCCCAGAGCATCTCCTCTaGCTCTGTCTCATCTATGTC | + |
|
Preference number: 2 (lower is better) Translates to: RDSGIQGHVYLQIGMYLSPEHLL*LCLIYV Trigger: GACATAGATGAGACAGAGGCAGAGGAGATGCTCTGG...GCTCAAGTACATGCCAATTTGAAGGTAAACGTGGCCCTGAATTCCGCTGTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCTCTGTGACTATCAAGGAAATAGCTGAGGACTTCTTGGCCTGGTCAATGTTTCTCCTGCCTGGGGACTaGTGTCTGACATTTGCCATC | + |
|
Preference number: 2 (lower is better) Translates to: SSVTIKEIAEDFLAWSMFLLPGD*CLTFAI Trigger: GATGGCAAATGTCAGACACCAGTCCCCAGGCAGGAG...AAACATTGACCAGGCCAAGAAGTCCTCAGCTATTTCCTTGATAGTCACAGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR CAA 90 bp | ATTCAGGGCCACGTTTACCTTCAAATTGGCATGTACTTGAGCCTGTaGACAGGCGCGTTTCCAATTGAGCCGAGCAATAAAAGCCAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: IQGHVYLQIGMYLSL*TGAFPIEPSNKSQE Trigger: TTCCTGGCTTTTATTGCTCGGCTCAATTGGAAACGCGCCTGTCAACAGGCTCAAGTACATGCCAATTTGAAGGTAAACGTGGCCCTGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR-3UTR TCA 90 bp | TTAACTTCACAGACTGAGGAGCACCCAAGTTGCTGGATTGATGGCATTCCCACAATTAACTTCACAGACTaGGGAGCACCCAAGTTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: LTSQTEEHPSCWIDGIPTINFTD*GAPKLL Trigger: CAGCAACTTGGGTGCTCCTCAGTCTGTGAAGTTAAT...TGTGGGAATGCCATCAATCCAGCAACTTGGGTGCTCCTCAGTCTGTGAAGTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010267.10 ENSMUST00000131723.8 |
||
| 3UTR-3UTR TCA 90 bp | TTAACTTCACAGACTGAGGAGCACCCAAGTTGCTGGATTGATGGCATTCCCACATCCCTCCTCCATCCATaGGATAAAAAGGTCACCACA | + |
|
Preference number: 2 (lower is better) Translates to: LTSQTEEHPSCWIDGIPTSLLHP*DKKVTT Trigger: TGTGGTGACCTTTTTATCTCATGGATGGAGGAGGGA...TGTGGGAATGCCATCAATCCAGCAACTTGGGTGCTCCTCAGTCTGTGAAGTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR-3UTR GCA 90 bp | TTAACTTCACAGACTGAGGAGCACCCAAGTTGCTGGATTGATGGCATTCCCACAGACAGTAGACAGCAGTaGATGTTTGACAGTGGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: LTSQTEEHPSCWIDGIPTDSRQQ*MFDSGR Trigger: TCTGCCACTGTCAAACATGCACTGCTGTCTACTGTC...TGTGGGAATGCCATCAATCCAGCAACTTGGGTGCTCCTCAGTCTGTGAAGTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010267.10 ENSMUST00000131723.8 |
||
| 3UTR-3UTR CCA 90 bp | TTAACTTCACAGACTGAGGAGCACCCAAGTTGCTGGATTGATGGCATTCCCACATGTGACACTATCCTTTaGAAACATGGGGACAGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: LTSQTEEHPSCWIDGIPTCDTIL*KHGDSG Trigger: GCCACTGTCCCCATGTTTCCAAAGGATAGTGTCACA...TGTGGGAATGCCATCAATCCAGCAACTTGGGTGCTCCTCAGTCTGTGAAGTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010267.10 ENSMUST00000131723.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGCTGAACATATTGCTGTCTGCAGTATCCCCAGCCCTGATGTTTCAATGTGGGTCCTCCCAGCTACAATaGTCTAAATATAGGTCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: MLNILLSAVSPALMFQCGSSQLQ*SKYRSF Trigger: GAAGGACCTATATTTAGAGCATTGTAGCTGGGAGGA...CCCACATTGAAACATCAGGGCTGGGGATACTGCAGACAGCAATATGTTCAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR CAA 90 bp | GCAAAATCAACATTCCGGTTGGTACAATGTTTCGAATACTGGTATTaGGTAGGTAAGTATATTGCAGGCATTGTCCACTCCAGAGCATCT | + |
|
Preference number: 2 (lower is better) Translates to: AKSTFRLVQCFEYWY*VGKYIAGIVHSRAS Trigger: AGATGCTCTGGAGTGGACAATGCCTGCAATATACTTACCTACCAAATACCAGTATTCGAAACATTGTACCAACCGGAATGTTGATTTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010267.10 ENSMUST00000131723.8 |
||
| 3UTR TCA 72 bp | GGCTCTGCTCAGCACTCCTGCCTGGGGACTGGTGTCTaGCATTTGCCATCTGGGAAGACTCCAGAGCCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: GSAQHSCLGTGV*HLPSGKTPEPH Trigger: GTGGGGCTCTGGAGTCTTCCCAGATGGCAAATGTCAGACACCAGTCCCCAGGCAGGAGTGCTGAGCAGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR CCA 72 bp | GCCGTTGTGAGCTGTGTCTTCTCAGCTGTAGCAGCCTaGCTCTGCTCAGCACTCCTGCCTGGGGACTGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: AVVSCVFSAVAA*LCSALLPGDWC Trigger: ACACCAGTCCCCAGGCAGGAGTGCTGAGCAGAGCCAGGCTGCTACAGCTGAGAAGACACAGCTCACAACGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR GCA 72 bp | GTGAGCTGTGTCTTCTCAGCTGTAGCAGCCTGGCTCTaGTCAGCACTCCTGCCTGGGGACTGGTGTCTGACA | + |
|
Preference number: 3 (lower is better) Translates to: VSCVFSAVAAWL*SALLPGDWCLT Trigger: TGTCAGACACCAGTCCCCAGGCAGGAGTGCTGAGCAGAGCCAGGCTGCTACAGCTGAGAAGACACAGCTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR GCA 72 bp | GGACTTCTTGGCCTGGTCAATGTTTCCTGCGCCCAGTaGATTTCCCACCCGGACGTTGGCAGCCACACTGAA | + |
|
Preference number: 3 (lower is better) Translates to: GLLGLVNVSCAQ*ISHPDVGSHTE Trigger: TTCAGTGTGGCTGCCAACGTCCGGGTGGGAAATGCACTGGGCGCAGGAAACATTGACCAGGCCAAGAAGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR TCA 72 bp | GCGTTGACAAGGTTAGCTGCGATGCCCGTCATAATCTaGGGCAGAACGATGCCCACACGCTCTAGCAGACCA | + |
|
Preference number: 3 (lower is better) Translates to: ALTRLAAMPVII*GRTMPTRSSRP Trigger: TGGTCTGCTAGAGCGTGTGGGCATCGTTCTGCCTCAGATTATGACGGGCATCGCAGCTAACCTTGTCAACGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR-3UTR CAA 90 bp | TTAACTTCACAGACTGAGGAGCACCCAAGTTGCTGGATTGATGGCATTCCCACATTTCCCACCCGGACGTaGGCAGCCACACTGAAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LTSQTEEHPSCWIDGIPTFPTRT*AATLKP Trigger: AGGCTTCAGTGTGGCTGCCAACGTCCGGGTGGGAAA...TGTGGGAATGCCATCAATCCAGCAACTTGGGTGCTCCTCAGTCTGTGAAGTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR TCA 72 bp | TTGAGCCGAGCAATAAAAGCCAGGAAGCACGTGGTCTaGCAGGTAGTGCAGATGATGATGCCTGACCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: LSRAIKARKHVV*QVVQMMMPDHR Trigger: CCTGTGGTCAGGCATCATCATCTGCACTACCTGTCAGACCACGTGCTTCCTGGCTTTTATTGCTCGGCTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR GCA 72 bp | AATCCAGGACCCAGTCCCAGCTCCTCCCAGCTACAATaGTCTAAATATAGGTCCTTCCGTCAGCCTCAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: NPGPSPSSSQLQ*SKYRSFRQPQL Trigger: TAGCTGAGGCTGACGGAAGGACCTATATTTAGAGCATTGTAGCTGGGAGGAGCTGGGACTGGGTCCTGGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR GCA 72 bp | AAACACATAGTTGGCCAGGGCGTTGACAAGGTTAGCTaGGATGCCCGTCATAATCTGAGGCAGAACGATGCC | + |
|
Preference number: 3 (lower is better) Translates to: KHIVGQGVDKVS*DARHNLRQNDA Trigger: GGCATCGTTCTGCCTCAGATTATGACGGGCATCGCAGCTAACCTTGTCAACGCCCTGGCCAACTATGTGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR CCA 72 bp | CGTCATCATAATTTCTCCATGGCTCTCAGGACACACTaGGTGAGCAGGCTCGTGAGAGACAGCGGAATTCAG | + |
|
Preference number: 3 (lower is better) Translates to: RHHNFSMALRTH*VSRLVRDSGIQ Trigger: CTGAATTCCGCTGTCTCTCACGAGCCTGCTCACCCAGTGTGTCCTGAGAGCCATGGAGAAATTATGATGACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR CCA 72 bp | GTGACTATCAAGGAAATAGCTGAGGACTTCTTGGCCTaGTCAATGTTTCCTGCGCCCAGTGCATTTCCCACC | + |
|
Preference number: 3 (lower is better) Translates to: VTIKEIAEDFLA*SMFPAPSAFPT Trigger: GGTGGGAAATGCACTGGGCGCAGGAAACATTGACCAGGCCAAGAAGTCCTCAGCTATTTCCTTGATAGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR-3UTR CAA 90 bp | AACATATTGCTGTCTGCAGTATCCCCAGCCCTGATGTTTCAATGTGGGGTGGATATGACTGGCTCTGAATaGTCTCTATGTTCAAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: NILLSAVSPALMFQCGVDMTGSE*SLCSKL Trigger: CAGTTTTGAACATAGAGACAATTCAGAGCCAGTCAT...ATCCACCCCACATTGAAACATCAGGGCTGGGGATACTGCAGACAGCAATATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000010267.10 ENSMUST00000131723.8 |
||
| 3UTR TCA 72 bp | ATGTTCAAAACTGCACGTGGGCCCAGACTTAAACAGTaGTTCACTTTCCAGGGGCTCAACTTTAACATTGAT | + |
|
Preference number: 3 (lower is better) Translates to: MFKTARGPRLKQ*FTFQGLNFNID Trigger: ATCAATGTTAAAGTTGAGCCCCTGGAAAGTGAATCACTGTTTAAGTCTGGGCCCACGTGCAGTTTTGAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010267.10 ENSMUST00000131723.8 |
||
| 3UTR GCA 72 bp | TCAGCATTAACTTCACAGACTGAGGAGCACCCAAGTTaGTGGATTGATGGCATTCCCACATTATTCAATTCT | + |
|
Preference number: 3 (lower is better) Translates to: SALTSQTEEHPS*WIDGIPTLFNS Trigger: AGAATTGAATAATGTGGGAATGCCATCAATCCAGCAACTTGGGTGCTCCTCAGTCTGTGAAGTTAATGCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| 3UTR TCA 72 bp | TTTGAATTCTCAGTTCATAATTCCCATGGGCACAGTTaGATTCTGTTAACTATAATGACTGGCTCTGAATTG | + |
|
Preference number: 3 (lower is better) Translates to: FEFSVHNSHGHS*ILLTIMTGSEL Trigger: CAATTCAGAGCCAGTCATTATAGTTAACAGAATTCAACTGTGCCCATGGGAATTATGAACTGAGAATTCAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010267.10 ENSMUST00000131723.8 |
||
| CDS-3UTR CCA 90 bp | CTTTGGAAACATGGGGACAGTGGCAGTGAGCTAGAGTCTCCAGGTGACTCCCTGGAGGACTTCTTGGCCTaGTCAATGTTTCCTGCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LWKHGDSGSELESPGDSLEDFLA*SMFPAP Trigger: GGGCGCAGGAAACATTGACCAGGCCAAGAAGTCCTC...CAGGGAGTCACCTGGAGACTCTAGCTCACTGCCACTGTCCCCATGTTTCCAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010267.10 |
||
| 3UTR CAA 72 bp | ATGTTTCCTGCGCCCAGTGCATTTCCCACCCGGACGTaGGCAGCCACACTGAAGCCTGAAGGGATCATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: MFPAPSAFPTRT*AATLKPEGIMY Trigger: ATACATGATCCCTTCAGGCTTCAGTGTGGCTGCCAACGTCCGGGTGGGAAATGCACTGGGCGCAGGAAACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| CDS-3UTR GCA 90 bp | GGCCCAGAACATGCTGAACATATTGCTGTCTGCAGTATCCCCAGCCCTGATGTTCCTTCTGGTTCCCAGTaGCCCTCAGGATACCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: GPEHAEHIAVCSIPSPDVPSGSQ*PSGYHH Trigger: GTGGTGGTATCCTGAGGGGCACTGGGAACCAGAAGG...AACATCAGGGCTGGGGATACTGCAGACAGCAATATGTTCAGCATGTTCTGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010267.10 |
||
| CDS-3UTR TCA 90 bp | TGTGACACTATCCTTTGGAAACATGGGGACAGTGGCAGTGAGCTAGAGTCTCCAAGCAGAGGAGCAGGATaGGTGTCCCCCTTTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CDTILWKHGDSGSELESPSRGAG*VSPFAG Trigger: TCCTGCAAAGGGGGACACTCATCCTGCTCCTCTGCT...TGGAGACTCTAGCTCACTGCCACTGTCCCCATGTTTCCAAAGGATAGTGTCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000010267.10 ENSMUST00000131723.8 |
||
| CDS-3UTR CCA 90 bp | GGCCCAGAACATGCTGAACATATTGCTGTCTGCAGTATCCCCAGCCCTGATGTTAGGAACATCATCAGCTaGGCCAAGAACGCAGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: GPEHAEHIAVCSIPSPDVRNIIS*AKNAGP Trigger: GGGTCCTGCGTTCTTGGCCCAGCTGATGATGTTCCT...AACATCAGGGCTGGGGATACTGCAGACAGCAATATGTTCAGCATGTTCTGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010267.10 ENSMUST00000131723.8 |
||
| CDS-3UTR CCA 90 bp | CTTTGGAAACATGGGGACAGTGGCAGTGAGCTAGAGTCTCCAGGTGACTCCCTGAGAGGAACAGGAAAATaGCCAGGGCAAACTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LWKHGDSGSELESPGDSLRGTGK*PGQTGR Trigger: TCTCCCAGTTTGCCCTGGCCATTTTCCTGTTCCTCT...CAGGGAGTCACCTGGAGACTCTAGCTCACTGCCACTGTCCCCATGTTTCCAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010267.10 |
||
| CDS-3UTR TCA 90 bp | TTAACTTCACAGACTGAGGAGCACCCAAGTTGCTGGATTGATGGCATTCCCACAAGCAGAGGAGCAGGATaGGTGTCCCCCTTTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LTSQTEEHPSCWIDGIPTSRGAG*VSPFAG Trigger: TCCTGCAAAGGGGGACACTCATCCTGCTCCTCTGCT...TGTGGGAATGCCATCAATCCAGCAACTTGGGTGCTCCTCAGTCTGTGAAGTTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010267.10 ENSMUST00000131723.8 |
||
| CDS-3UTR TCA 90 bp | TGTGACACTATCCTTTGGAAACATGGGGACAGTGGCAGTGAGCTAGAGTCTCCACGTTGGCAGCCACACTaGAGCCTGAAGGGATCATGT | + |
|
Preference number: 4 (lower is better) Translates to: CDTILWKHGDSGSELESPRWQPH*SLKGSC Trigger: ACATGATCCCTTCAGGCTTCAGTGTGGCTGCCAACG...TGGAGACTCTAGCTCACTGCCACTGTCCCCATGTTTCCAAAGGATAGTGTCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010267.10 |
||
| CDS-3UTR GCA 90 bp | GAATTCCAGCCCGGAATGAAGACAGTAGACAGCAGTGCATGTTTGACAGTGGCATACCACTCAGGAAGCTaGCAACCTCATAGGCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: EFQPGMKTVDSSACLTVAYHSGS*QPHRPT Trigger: GGTGGGCCTATGAGGTTGGCAGCTTCCTGAGTGGTA...TGCCACTGTCAAACATGCACTGCTGTCTACTGTCTTCATTCCGGGCTGGAATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010267.10 |
||
| CDS-3UTR TCA 90 bp | TGTGACACTATCCTTTGGAAACATGGGGACAGTGGCAGTGAGCTAGAGTCTCCACATCCGGGTCCTGTCTaGAGAGCAGCAGAATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CDTILWKHGDSGSELESPHPGPV*RAAEFA Trigger: AGCAAATTCTGCTGCTCTTCAGACAGGACCCGGATG...TGGAGACTCTAGCTCACTGCCACTGTCCCCATGTTTCCAAAGGATAGTGTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010267.10 ENSMUST00000131723.8 |
||
| CDS-3UTR GCA 90 bp | GGCCCAGAACATGCTGAACATATTGCTGTCTGCAGTATCCCCAGCCCTGATGTTAATTGCCAGTGTGACTaGATCCAACTCCAGCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GPEHAEHIAVCSIPSPDVNCQCD*IQLQLA Trigger: GGCAAGCTGGAGTTGGATGCAGTCACACTGGCAATT...AACATCAGGGCTGGGGATACTGCAGACAGCAATATGTTCAGCATGTTCTGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010267.10 ENSMUST00000131723.8 |
||
| CDS-3UTR GCA 90 bp | GAATTCCAGCCCGGAATGAAGACAGTAGACAGCAGTGCATGTTTGACAGTGGCACTCCCAACTCCACCATaGCAAGGATACCACTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EFQPGMKTVDSSACLTVALPTPP*QGYHSG Trigger: TCCTGAGTGGTATCCTTGGCATGGTGGAGTTGGGAG...TGCCACTGTCAAACATGCACTGCTGTCTACTGTCTTCATTCCGGGCTGGAATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010267.10 |
||
| CDS-3UTR CCA 90 bp | GAATTCCAGCCCGGAATGAAGACAGTAGACAGCAGTGCATGTTTGACAGTGGCATCCAGCTTGCCCAAGTaGCCACAGAACACTGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: EFQPGMKTVDSSACLTVASSLPK*PQNTEL Trigger: AAGCTCAGTGTTCTGTGGCCACTTGGGCAAGCTGGA...TGCCACTGTCAAACATGCACTGCTGTCTACTGTCTTCATTCCGGGCTGGAATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010267.10 ENSMUST00000131723.8 |
||
| 3UTR CAA 72 bp | TTCAAAGAGGTGGGACACAGCATAAATGGGGATCACTaGAGCCACCAAGGCCACGATATCCCGATCGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: FKEVGHSINGDH*SHQGHDIPIGS Trigger: ACTACCGATCGGGATATCGTGGCCTTGGTGGCTCAAGTGATCCCCATTTATGCTGTGTCCCACCTCTTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| CDS-3UTR TCA 90 bp | ATGCTGAACATATTGCTGTCTGCAGTATCCCCAGCCCTGATGTTTCAATGTGGGCATCCGGGTCCTGTCTaGAGAGCAGCAGAATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: MLNILLSAVSPALMFQCGHPGPV*RAAEFA Trigger: AGCAAATTCTGCTGCTCTTCAGACAGGACCCGGATG...CCCACATTGAAACATCAGGGCTGGGGATACTGCAGACAGCAATATGTTCAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010267.10 ENSMUST00000131723.8 |
||
| CDS-3UTR TCA 90 bp | CATGCTGAACATATTGCTGTCTGCAGTATCCCCAGCCCTGATGTTTCAATGTGGCGATGGGGAGGCCAATaGCATAATACCCGATGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HAEHIAVCSIPSPDVSMWRWGGQ*HNTRWH Trigger: ATGCCATCGGGTATTATGTCATTGGCCTCCCCATCG...CCACATTGAAACATCAGGGCTGGGGATACTGCAGACAGCAATATGTTCAGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010267.10 |
||
| CDS-3UTR TCA 90 bp | CATGCTGAACATATTGCTGTCTGCAGTATCCCCAGCCCTGATGTTTCAATGTGGAGGAAGCACGTGGTCTaGCAGGTAGTGCAGATGATG | + |
|
Preference number: 4 (lower is better) Translates to: HAEHIAVCSIPSPDVSMWRKHVV*QVVQMM Trigger: CATCATCTGCACTACCTGTCAGACCACGTGCTTCCT...CCACATTGAAACATCAGGGCTGGGGATACTGCAGACAGCAATATGTTCAGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010267.10 |
||
| CDS-3UTR GCA 90 bp | GTAAGTATATTGCAGGCATTGTCCACTCCAGAGCATCTCCTCTGCCTCTGTCTCAATTGCCAGTGTGACTaGATCCAACTCCAGCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VSILQALSTPEHLLCLCLNCQCD*IQLQLA Trigger: GGCAAGCTGGAGTTGGATGCAGTCACACTGGCAATT...GAGACAGAGGCAGAGGAGATGCTCTGGAGTGGACAATGCCTGCAATATACTTAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010267.10 ENSMUST00000131723.8 |
||
| CDS-3UTR GCA 90 bp | ATGCTGAACATATTGCTGTCTGCAGTATCCCCAGCCCTGATGTTTCAATGTGGGGGTGTTGATGAAGAGTaGCCAGCAGGGAAAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: MLNILLSAVSPALMFQCGGVDEE*PAGKAA Trigger: TGCTGCTTTCCCTGCTGGGCACTCTTCATCAACACC...CCCACATTGAAACATCAGGGCTGGGGATACTGCAGACAGCAATATGTTCAGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000010267.10 ENSMUST00000131723.8 |
||
| CDS-3UTR GCA 90 bp | TGTTGGCCAATGCTGAACCCATCACCCCAAGATGCAGGTGATAGAGAAACACATGGTGTTGATGAAGAGTaGCCAGCAGGGAAAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CWPMLNPSPQDAGDRETHGVDEE*PAGKAA Trigger: TGCTGCTTTCCCTGCTGGGCACTCTTCATCAACACC...ATGTGTTTCTCTATCACCTGCATCTTGGGGTGATGGGTTCAGCATTGGCCAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| CDS-3UTR GCA 90 bp | TTAACTTCACAGACTGAGGAGCACCCAAGTTGCTGGATTGATGGCATTCCCACACTGGTCAATGTTTCCTaGGCCCAGTGCATTTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LTSQTEEHPSCWIDGIPTLVNVS*AQCISH Trigger: GTGGGAAATGCACTGGGCGCAGGAAACATTGACCAG...TGTGGGAATGCCATCAATCCAGCAACTTGGGTGCTCCTCAGTCTGTGAAGTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010267.10 |
||
| CDS-3UTR CCA 90 bp | AGAGACAGCGGAATTCAGGGCCACGTTTACCTTCAAATTGGCATGTACTTGAGCTCCAGCTTGCCCAAGTaGCCACAGAACACTGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RDSGIQGHVYLQIGMYLSSSLPK*PQNTEL Trigger: AAGCTCAGTGTTCTGTGGCCACTTGGGCAAGCTGGA...GCTCAAGTACATGCCAATTTGAAGGTAAACGTGGCCCTGAATTCCGCTGTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| CDS-3UTR CCA 90 bp | TTGCTGTCTGCAGTATCCCCAGCCCTGATGTTTCAATGTGGGGTGGATTTGTTCAGCTGCAGGAAGCGCTaGGATGAAGATCATGACGTA | + |
|
Preference number: 4 (lower is better) Translates to: LLSAVSPALMFQCGVDLFSCRKR*DEDHDV Trigger: TACGTCATGATCTTCATCCCAGCGCTTCCTGCAGCT...GAACAAATCCACCCCACATTGAAACATCAGGGCTGGGGATACTGCAGACAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010267.10 ENSMUST00000131723.8 |
||
| 3UTR CAA 72 bp | ATTCAGGGCCACGTTTACCTTCAAATTGGCATGTACTaGAGCCTGTTGACAGGCGCGTTTCCAATTGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: IQGHVYLQIGMY*SLLTGAFPIEP Trigger: CGGCTCAATTGGAAACGCGCCTGTCAACAGGCTCAAGTACATGCCAATTTGAAGGTAAACGTGGCCCTGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| CDS-3UTR GCA 90 bp | AGTCCCAGCTCCTCCCAGCTACAATGCTCTAAATATAGGTCCTTCCGTCAGCCTCGTATAAAGAAAAGCTaGAGGAAGCGCTGGGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: SPSSSQLQCSKYRSFRQPRIKKS*RKRWDE Trigger: TTCATCCCAGCGCTTCCTGCAGCTTTTCTTTATACG...AGGCTGACGGAAGGACCTATATTTAGAGCATTGTAGCTGGGAGGAGCTGGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| CDS-3UTR CCA 90 bp | GGCCCAGAACATGCTGAACATATTGCTGTCTGCAGTATCCCCAGCCCTGATGTTGGCAGAACGATGCCCTaGTTGAGCAAGTATTTAACT | + |
|
Preference number: 4 (lower is better) Translates to: GPEHAEHIAVCSIPSPDVGRTMP*LSKYLT Trigger: AGTTAAATACTTGCTCAACCAGGGCATCGTTCTGCC...AACATCAGGGCTGGGGATACTGCAGACAGCAATATGTTCAGCATGTTCTGGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010267.10 |
||
| 3UTR CAA 72 bp | AGCTCTGTGACTATCAAGGAAATAGCTGAGGACTTCTaGGCCTGGTCAATGTTTCCTGCGCCCAGTGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: SSVTIKEIAEDF*AWSMFPAPSAF Trigger: AAATGCACTGGGCGCAGGAAACATTGACCAGGCCAAGAAGTCCTCAGCTATTTCCTTGATAGTCACAGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| CDS-3UTR GCA 90 bp | ATGCTGAACATATTGCTGTCTGCAGTATCCCCAGCCCTGATGTTTCAATGTGGGCGTATAAAGAAAAGCTaGAGGAAGCGCTGGGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: MLNILLSAVSPALMFQCGRIKKS*RKRWDE Trigger: TTCATCCCAGCGCTTCCTGCAGCTTTTCTTTATACG...CCCACATTGAAACATCAGGGCTGGGGATACTGCAGACAGCAATATGTTCAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010267.10 ENSMUST00000131723.8 |
||
| CDS-3UTR GCA 90 bp | CATGCTGAACATATTGCTGTCTGCAGTATCCCCAGCCCTGATGTTTCAATGTGGAAGAGCAGCAGAATTTaGTCGGTGTTGATGAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: HAEHIAVCSIPSPDVSMWKSSRI*SVLMKS Trigger: ACTCTTCATCAACACCGAGCAAATTCTGCTGCTCTT...CCACATTGAAACATCAGGGCTGGGGATACTGCAGACAGCAATATGTTCAGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010267.10 ENSMUST00000131723.8 |
||
| CDS-3UTR CCA 90 bp | CTCAACTTTAACATTGATGCAAAAGTGACACGCATTCAGAAGAGACTGTTTTTGATGGCTCCAACCTTCTaGTTCCCAGTGCCCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LNFNIDAKVTRIQKRLFLMAPTF*FPVPLR Trigger: CCTGAGGGGCACTGGGAACCAGAAGGTTGGAGCCAT...CAAAAACAGTCTCTTCTGAATGCGTGTCACTTTTGCATCAATGTTAAAGTTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000010267.10 |
||
| 3UTR CAA 72 bp | CACGTTTACCTTCAAATTGGCATGTACTTGAGCCTGTaGACAGGCGCGTTTCCAATTGAGCCGAGCAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: HVYLQIGMYLSL*TGAFPIEPSNK Trigger: TTTATTGCTCGGCTCAATTGGAAACGCGCCTGTCAACAGGCTCAAGTACATGCCAATTTGAAGGTAAACGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| CDS-3UTR CCA 90 bp | CTCAACTTTAACATTGATGCAAAAGTGACACGCATTCAGAAGAGACTGTTTTTGAGGAACATCATCAGCTaGGCCAAGAACGCAGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: LNFNIDAKVTRIQKRLFLRNIIS*AKNAGP Trigger: GGGTCCTGCGTTCTTGGCCCAGCTGATGATGTTCCT...CAAAAACAGTCTCTTCTGAATGCGTGTCACTTTTGCATCAATGTTAAAGTTGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000010267.10 ENSMUST00000131723.8 |
||
| 3UTR CAA 72 bp | ACATTCCGGTTGGTACAATGTTTCGAATACTGGTATTaGGTAGGTAAGTATATTGCAGGCATTGTCCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: TFRLVQCFEYWY*VGKYIAGIVHS Trigger: GGAGTGGACAATGCCTGCAATATACTTACCTACCAAATACCAGTATTCGAAACATTGTACCAACCGGAATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010267.10 ENSMUST00000131723.8 |
||
| CDS-3UTR CCA 90 bp | CTCAACTTTAACATTGATGCAAAAGTGACACGCATTCAGAAGAGACTGTTTTTGATCATAATTTCTCCATaGCTCTCAGGACACACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LNFNIDAKVTRIQKRLFLIIISP*LSGHTG Trigger: CCCAGTGTGTCCTGAGAGCCATGGAGAAATTATGAT...CAAAAACAGTCTCTTCTGAATGCGTGTCACTTTTGCATCAATGTTAAAGTTGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010267.10 |
||
| CDS-3UTR CAA 90 bp | AACATATTGCTGTCTGCAGTATCCCCAGCCCTGATGTTTCAATGTGGGGTGGATTTTCCCACCCGGACGTaGGCAGCCACACTGAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: NILLSAVSPALMFQCGVDFPTRT*AATLKP Trigger: AGGCTTCAGTGTGGCTGCCAACGTCCGGGTGGGAAA...ATCCACCCCACATTGAAACATCAGGGCTGGGGATACTGCAGACAGCAATATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000010267.10 |
||
| CDS GCA 90 bp | GTGATAGAGAAACACATAGTTGGCCAGGGCGTTGACAAGGTTAGCTaGGATGCCCGTCATAATCTGAGGCAGAACGATGCCCTGGTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: VIEKHIVGQGVDKVS*DARHNLRQNDALVE Trigger: CTCAACCAGGGCATCGTTCTGCCTCAGATTATGACGGGCATCGCAGCTAACCTTGTCAACGCCCTGGCCAACTATGTGTTTCTCTATCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010267.10 ENSMUST00000148671.2 |
||
| CDS CCA 90 bp | ATGAGTGTCCCCCTTTGCAGGATAACCCCTACGTGCTTTAAGTTCTaGCTCCCGTATGTCTGGGAGATGAGCGTGTCACAAGCAGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: MSVPLCRITPTCFKF*LPYVWEMSVSQAED Trigger: GTCTTCTGCTTGTGACACGCTCATCTCCCAGACATACGGGAGCCAGAACTTAAAGCACGTAGGGGTTATCCTGCAAAGGGGGACACTCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010267.10 ENSMUST00000131723.8 ENSMUST00000148671.2 |
||
| CDS-3UTR CAA 90 bp | TTAACTTCACAGACTGAGGAGCACCCAAGTTGCTGGATTGATGGCATTCCCACAGCATCCAACTCCAGCTaGCCCAAGTGGCCACAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LTSQTEEHPSCWIDGIPTASNSS*PKWPQN Trigger: GTTCTGTGGCCACTTGGGCAAGCTGGAGTTGGATGC...TGTGGGAATGCCATCAATCCAGCAACTTGGGTGCTCCTCAGTCTGTGAAGTTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010267.10 ENSMUST00000131723.8 |
||
| CDS-3UTR CAA 90 bp | CTTTGGAAACATGGGGACAGTGGCAGTGAGCTAGAGTCTCCAGGTGACTCCCTGTTCCCAGACAGTTTATaGCTGTCCTTTGGACGGATA | + |
|
Preference number: 5 (lower is better) Translates to: LWKHGDSGSELESPGDSLFPDSL*LSFGRI Trigger: TATCCGTCCAAAGGACAGCAATAAACTGTCTGGGAA...CAGGGAGTCACCTGGAGACTCTAGCTCACTGCCACTGTCCCCATGTTTCCAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010267.10 |
||
| CDS-3UTR CAA 90 bp | GGCCCAGAACATGCTGAACATATTGCTGTCTGCAGTATCCCCAGCCCTGATGTTAGAACGATGCCCTGGTaGAGCAAGTATTTAACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GPEHAEHIAVCSIPSPDVRTMPW*SKYLTC Trigger: ACAAGTTAAATACTTGCTCAACCAGGGCATCGTTCT...AACATCAGGGCTGGGGATACTGCAGACAGCAATATGTTCAGCATGTTCTGGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010267.10 |
||
| CDS-3UTR CAA 90 bp | CATGCTGAACATATTGCTGTCTGCAGTATCCCCAGCCCTGATGTTTCAATGTGGGAAATGCCTGTGACATaGATAACCGCAATTGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: HAEHIAVCSIPSPDVSMWEMPVT*ITAIAS Trigger: ACTGGCAATTGCGGTTATCAATGTCACAGGCATTTC...CCACATTGAAACATCAGGGCTGGGGATACTGCAGACAGCAATATGTTCAGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010267.10 ENSMUST00000131723.8 |
||
| CDS-3UTR CAA 90 bp | CTCAACTTTAACATTGATGCAAAAGTGACACGCATTCAGAAGAGACTGTTTTTGGCATCCAACTCCAGCTaGCCCAAGTGGCCACAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LNFNIDAKVTRIQKRLFLASNSS*PKWPQN Trigger: GTTCTGTGGCCACTTGGGCAAGCTGGAGTTGGATGC...CAAAAACAGTCTCTTCTGAATGCGTGTCACTTTTGCATCAATGTTAAAGTTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000010267.10 ENSMUST00000131723.8 |
||
| CDS-3UTR CAA 90 bp | TGTGACACTATCCTTTGGAAACATGGGGACAGTGGCAGTGAGCTAGAGTCTCCACATGCAAGGATCTGGTaGAGCAAGTATTTAACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: CDTILWKHGDSGSELESPHARIW*SKYLTC Trigger: ACAAGTTAAATACTTGCTCAACCAGATCCTTGCATG...TGGAGACTCTAGCTCACTGCCACTGTCCCCATGTTTCCAAAGGATAGTGTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| CDS-3UTR CAA 90 bp | AGCTCTGTGACTATCAAGGAAATAGCTGAGGACTTCTTGGCCTGGTCAATGTTTGAAATGCCTGTGACATaGATAACCGCAATTGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SSVTIKEIAEDFLAWSMFEMPVT*ITAIAS Trigger: ACTGGCAATTGCGGTTATCAATGTCACAGGCATTTC...AAACATTGACCAGGCCAAGAAGTCCTCAGCTATTTCCTTGATAGTCACAGAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131723.8 |
||
| CDS TCA 72 bp | CGTGCTTTAAGTTCTGGCTCCCGTATGTCTGGGAGATaGGCGTGTCACAAGCAGAAGACAAGCCATGTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RALSSGSRMSGR*ACHKQKTSHVP Trigger: TGGGACATGGCTTGTCTTCTGCTTGTGACACGCTCATCTCCCAGACATACGGGAGCCAGAACTTAAAGCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010267.10 ENSMUST00000131723.8 ENSMUST00000148671.2 |
||
| CDS GCA 72 bp | AGGATGAGTGTCCCCCTTTGCAGGATAACCCCTACGTaGTTTAAGTTCTGGCTCCCGTATGTCTGGGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: RMSVPLCRITPT*FKFWLPYVWEM Trigger: CATCTCCCAGACATACGGGAGCCAGAACTTAAAGCACGTAGGGGTTATCCTGCAAAGGGGGACACTCATCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010267.10 ENSMUST00000131723.8 ENSMUST00000148671.2 |
||
| CDS CCA 72 bp | ACTGAGCTTATGAAACTGATTAGGAACATCATCAGCTaGGCCAAGAACGCAGGACCCGCCAGGACCAAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: TELMKLIRNIIS*AKNAGPARTKS Trigger: ACTCTTGGTCCTGGCGGGTCCTGCGTTCTTGGCCCAGCTGATGATGTTCCTAATCAGTTTCATAAGCTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010267.10 ENSMUST00000131723.8 |
||
| CDS TCA 72 bp | GAGCGTGTCACAAGCAGAAGACAAGCCATGTCCCACTaGAATGCCTGTGACATTGATAACCGCAATTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: ERVTSRRQAMSH*NACDIDNRNCQ Trigger: CTGGCAATTGCGGTTATCAATGTCACAGGCATTTCAGTGGGACATGGCTTGTCTTCTGCTTGTGACACGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010267.10 ENSMUST00000131723.8 ENSMUST00000148671.2 |
||
| CDS TCA 72 bp | GCGTTGACAAGGTTAGCTGCGATGCCCGTCATAATCTaGGGCAGAACGATGCCCTGGTTGAGCAAGTATTTA | + |
|
Preference number: 6 (lower is better) Translates to: ALTRLAAMPVII*GRTMPWLSKYL Trigger: TAAATACTTGCTCAACCAGGGCATCGTTCTGCCTCAGATTATGACGGGCATCGCAGCTAACCTTGTCAACGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010267.10 ENSMUST00000148671.2 |
||
| CDS CAA 90 bp | TCACAAGCAGAAGACAAGCCATGTCCCACTGAAATGCCTGTGACATaGATAACCGCAATTGCCAGTGTGACTGCATCCAACTCCAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SQAEDKPCPTEMPVT*ITAIASVTASNSSL Trigger: CAAGCTGGAGTTGGATGCAGTCACACTGGCAATTGCGGTTATCAATGTCACAGGCATTTCAGTGGGACATGGCTTGTCTTCTGCTTGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010267.10 ENSMUST00000131723.8 ENSMUST00000148671.2 |
||
| CDS CAA 72 bp | GAAGACAAGCCATGTCCCACTGAAATGCCTGTGACATaGATAACCGCAATTGCCAGTGTGACTGCATCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: EDKPCPTEMPVT*ITAIASVTASN Trigger: GTTGGATGCAGTCACACTGGCAATTGCGGTTATCAATGTCACAGGCATTTCAGTGGGACATGGCTTGTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010267.10 ENSMUST00000131723.8 ENSMUST00000148671.2 |
||