Pregenerated sensors for SLC46A3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029650Ensembl transcript IDs: ENSMUST00000031655.4, ENSMUST00000118527.8, ENSMUST00000138244.2
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTAGGTGCTGGGCCTGTTCTCTGTAGAACACAGTGTGCTGCTGGGTaGTCCCAAGAAGCAGCAGAGCTGGGTGCCTTCCTCCCGACTCAC | + |
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Preference number: 1 (lower is better) Translates to: VGAGPVLCRTQCAAG*SQEAAELGAFLPTH Trigger: GTGAGTCGGGAGGAAGGCACCCAGCTCTGCTGCTTCTTGGGACCACCCAGCAGCACACTGTGTTCTACAGAGAACAGGCCCAGCACCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| 3UTR CCA 90 bp | GTAGAACACAGTGTGCTGCTGGGTGGTCCCAAGAAGCAGCAGAGCTaGGTGCCTTCCTCCCGACTCACTTGGGTTAGGAGACAGGGTTTT | + |
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Preference number: 1 (lower is better) Translates to: VEHSVLLGGPKKQQS*VPSSRLTWVRRQGF Trigger: AAAACCCTGTCTCCTAACCCAAGTGAGTCGGGAGGAAGGCACCCAGCTCTGCTGCTTCTTGGGACCACCCAGCAGCACACTGTGTTCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| 3UTR TCA 90 bp | AAAATCCCTGAGAGGCCAGCAAGCCCATTGTGCAGACGGAGAGACTaGGGTCAGAACTCCTCAATCACATGGGAGACTGGAGCATGCCAG | + |
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Preference number: 1 (lower is better) Translates to: KIPERPASPLCRRRD*GQNSSITWETGACQ Trigger: CTGGCATGCTCCAGTCTCCCATGTGATTGAGGAGTTCTGACCTCAGTCTCTCCGTCTGCACAATGGGCTTGCTGGCCTCTCAGGGATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| 3UTR GCA 90 bp | CTTGGGTTAGGAGACAGGGTTTTGTCCTGTGGATTGCTGATGAAATaGGATTGTGGAGTTTATATTCTTCAGGAGTTGCGCAGAGGGACG | + |
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Preference number: 1 (lower is better) Translates to: LGLGDRVLSCGLLMK*DCGVYILQELRRGT Trigger: CGTCCCTCTGCGCAACTCCTGAAGAATATAAACTCCACAATCGCATTTCATCAGCAATCCACAGGACAAAACCCTGTCTCCTAACCCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| 3UTR-3UTR CCA 90 bp | CACAAGCCTTCCTCGGCTCTTCACGGGGTTTCTCTGGTCCATGGAGAAGTGAGCAAGAAGCAGCAGAGCTaGGTGCCTTCCTCCCGACTC | + |
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Preference number: 2 (lower is better) Translates to: HKPSSALHGVSLVHGEVSKKQQS*VPSSRL Trigger: GAGTCGGGAGGAAGGCACCCAGCTCTGCTGCTTCTT...GCTCACTTCTCCATGGACCAGAGAAACCCCGTGAAGAGCCGAGGAAGGCTTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| 3UTR-3UTR GCA 90 bp | GCCAGCAAGCCCATTGTGCAGACGGAGAGACTGAGGTCAGAACTCCTCAATCACAGCAGCAGAGCTGGGTaGCTTCCTCCCGACTCACTT | + |
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Preference number: 2 (lower is better) Translates to: ASKPIVQTERLRSELLNHSSRAG*LPPDSL Trigger: AAGTGAGTCGGGAGGAAGGCACCCAGCTCTGCTGCT...GTGATTGAGGAGTTCTGACCTCAGTCTCTCCGTCTGCACAATGGGCTTGCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| 3UTR-3UTR GCA 90 bp | CACAAGCCTTCCTCGGCTCTTCACGGGGTTTCTCTGGTCCATGGAGAAGTGAGCATATTCTTCAGGAGTTaGGCAGAGGGACGTGTGCAT | + |
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Preference number: 2 (lower is better) Translates to: HKPSSALHGVSLVHGEVSIFFRS*AEGRVH Trigger: ATGCACACGTCCCTCTGCGCAACTCCTGAAGAATAT...GCTCACTTCTCCATGGACCAGAGAAACCCCGTGAAGAGCCGAGGAAGGCTTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCATTGTGCAGACGGAGAGACTGAGGTCAGAACTCCTCAATCACATGGGAGAGGTTTCTCTGGTCCATaGAGAAGTGAGCATGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: AHCADGETEVRTPQSHGRGFSGP*RSEHGR Trigger: CCTACCATGCTCACTTCTCCATGGACCAGAGAAACC...TCTCCCATGTGATTGAGGAGTTCTGACCTCAGTCTCTCCGTCTGCACAATGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| 3UTR-3UTR GCA 90 bp | GCCCATTGTGCAGACGGAGAGACTGAGGTCAGAACTCCTCAATCACATGGGAGAATATTCTTCAGGAGTTaGGCAGAGGGACGTGTGCAT | + |
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Preference number: 2 (lower is better) Translates to: AHCADGETEVRTPQSHGRIFFRS*AEGRVH Trigger: ATGCACACGTCCCTCTGCGCAACTCCTGAAGAATAT...TCTCCCATGTGATTGAGGAGTTCTGACCTCAGTCTCTCCGTCTGCACAATGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| 3UTR-3UTR CCA 90 bp | GAACTCCTCAATCACATGGGAGACTGGAGCATGCCAGTGAAGTTATTGCTTTTAAAGAAGCAGCAGAGCTaGGTGCCTTCCTCCCGACTC | + |
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Preference number: 2 (lower is better) Translates to: ELLNHMGDWSMPVKLLLLKKQQS*VPSSRL Trigger: GAGTCGGGAGGAAGGCACCCAGCTCTGCTGCTTCTT...TAAAAGCAATAACTTCACTGGCATGCTCCAGTCTCCCATGTGATTGAGGAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| 3UTR-3UTR GCA 90 bp | CACAAGCCTTCCTCGGCTCTTCACGGGGTTTCTCTGGTCCATGGAGAAGTGAGCGGATTGCTGATGAAATaGGATTGTGGAGTTTATATT | + |
|
Preference number: 2 (lower is better) Translates to: HKPSSALHGVSLVHGEVSGLLMK*DCGVYI Trigger: AATATAAACTCCACAATCGCATTTCATCAGCAATCC...GCTCACTTCTCCATGGACCAGAGAAACCCCGTGAAGAGCCGAGGAAGGCTTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| 3UTR-3UTR CCA 90 bp | CACGGGGTTTCTCTGGTCCATGGAGAAGTGAGCATGGTAGGTGCTGGGCCTGTTGATGAAATGCGATTGTaGAGTTTATATTCTTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: HGVSLVHGEVSMVGAGPVDEMRL*SLYSSG Trigger: TCCTGAAGAATATAAACTCCACAATCGCATTTCATC...AACAGGCCCAGCACCTACCATGCTCACTTCTCCATGGACCAGAGAAACCCCGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| 3UTR-3UTR GCA 90 bp | GTCCATGGAGAAGTGAGCATGGTAGGTGCTGGGCCTGTTCTCTGTAGAACACAGGGATTGCTGATGAAATaGGATTGTGGAGTTTATATT | + |
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Preference number: 2 (lower is better) Translates to: VHGEVSMVGAGPVLCRTQGLLMK*DCGVYI Trigger: AATATAAACTCCACAATCGCATTTCATCAGCAATCC...CTGTGTTCTACAGAGAACAGGCCCAGCACCTACCATGCTCACTTCTCCATGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCATGGAGAAGTGAGCATGGTAGGTGCTGGGCCTGTTCTCTGTAGAACACAGGATGAAATGCGATTGTaGAGTTTATATTCTTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: VHGEVSMVGAGPVLCRTQDEMRL*SLYSSG Trigger: TCCTGAAGAATATAAACTCCACAATCGCATTTCATC...CTGTGTTCTACAGAGAACAGGCCCAGCACCTACCATGCTCACTTCTCCATGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| 3UTR CAA 90 bp | GAACTCCTCAATCACATGGGAGACTGGAGCATGCCAGTGAAGTTATaGCTTTTAAGTTTTAACAAGGTTCACAAGCCTTCCTCGGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: ELLNHMGDWSMPVKL*LLSFNKVHKPSSAL Trigger: AAGAGCCGAGGAAGGCTTGTGAACCTTGTTAAAACTTAAAAGCAATAACTTCACTGGCATGCTCCAGTCTCCCATGTGATTGAGGAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| 3UTR CCA 72 bp | AGTGTGCTGCTGGGTGGTCCCAAGAAGCAGCAGAGCTaGGTGCCTTCCTCCCGACTCACTTGGGTTAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: SVLLGGPKKQQS*VPSSRLTWVRR Trigger: TCTCCTAACCCAAGTGAGTCGGGAGGAAGGCACCCAGCTCTGCTGCTTCTTGGGACCACCCAGCAGCACACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| 3UTR CCA 72 bp | GGGCCTGTTCTCTGTAGAACACAGTGTGCTGCTGGGTaGTCCCAAGAAGCAGCAGAGCTGGGTGCCTTCCTC | + |
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Preference number: 3 (lower is better) Translates to: GPVLCRTQCAAG*SQEAAELGAFL Trigger: GAGGAAGGCACCCAGCTCTGCTGCTTCTTGGGACCACCCAGCAGCACACTGTGTTCTACAGAGAACAGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| 3UTR TCA 72 bp | GAGAGGCCAGCAAGCCCATTGTGCAGACGGAGAGACTaGGGTCAGAACTCCTCAATCACATGGGAGACTGGA | + |
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Preference number: 3 (lower is better) Translates to: ERPASPLCRRRD*GQNSSITWETG Trigger: TCCAGTCTCCCATGTGATTGAGGAGTTCTGACCTCAGTCTCTCCGTCTGCACAATGGGCTTGCTGGCCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| 3UTR GCA 72 bp | TTACTGCCGACTGTCACTAGTCTGATGTGTGCTCACTaGATAGGGACGTGTGCATTGCTGCCGACTGTCACT | + |
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Preference number: 3 (lower is better) Translates to: LLPTVTSLMCAH*IGTCALLPTVT Trigger: AGTGACAGTCGGCAGCAATGCACACGTCCCTATGCAGTGAGCACACATCAGACTAGTGACAGTCGGCAGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| 3UTR-3UTR CAA 90 bp | CACAAGCCTTCCTCGGCTCTTCACGGGGTTTCTCTGGTCCATGGAGAAGTGAGCGCTGATGAAATGCGATaGTGGAGTTTATATTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: HKPSSALHGVSLVHGEVSADEMR*WSLYSS Trigger: TGAAGAATATAAACTCCACAATCGCATTTCATCAGC...GCTCACTTCTCCATGGACCAGAGAAACCCCGTGAAGAGCCGAGGAAGGCTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| 3UTR GCA 72 bp | GGAGACAGGGTTTTGTCCTGTGGATTGCTGATGAAATaGGATTGTGGAGTTTATATTCTTCAGGAGTTGCGC | + |
|
Preference number: 3 (lower is better) Translates to: GDRVLSCGLLMK*DCGVYILQELR Trigger: GCGCAACTCCTGAAGAATATAAACTCCACAATCGCATTTCATCAGCAATCCACAGGACAAAACCCTGTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| 3UTR CCA 72 bp | GGTTTTGTCCTGTGGATTGCTGATGAAATGCGATTGTaGAGTTTATATTCTTCAGGAGTTGCGCAGAGGGAC | + |
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Preference number: 3 (lower is better) Translates to: GFVLWIADEMRL*SLYSSGVAQRD Trigger: GTCCCTCTGCGCAACTCCTGAAGAATATAAACTCCACAATCGCATTTCATCAGCAATCCACAGGACAAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| 3UTR TCA 72 bp | CTGAATAAAAATTCCTCATTATGTCTTCAAAATCCCTaGGAGGCCAGCAAGCCCATTGTGCAGACGGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: LNKNSSLCLQNP*EASKPIVQTER Trigger: TCTCTCCGTCTGCACAATGGGCTTGCTGGCCTCTCAGGGATTTTGAAGACATAATGAGGAATTTTTATTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| 3UTR CCA 72 bp | CGACTCACTTGGGTTAGGAGACAGGGTTTTGTCCTGTaGATTGCTGATGAAATGCGATTGTGGAGTTTATAT | + |
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Preference number: 3 (lower is better) Translates to: RLTWVRRQGFVL*IADEMRLWSLY Trigger: ATATAAACTCCACAATCGCATTTCATCAGCAATCCACAGGACAAAACCCTGTCTCCTAACCCAAGTGAGTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| 3UTR CCA 72 bp | AGACTGAGGTCAGAACTCCTCAATCACATGGGAGACTaGAGCATGCCAGTGAAGTTATTGCTTTTAAGTTTT | + |
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Preference number: 3 (lower is better) Translates to: RLRSELLNHMGD*SMPVKLLLLSF Trigger: AAAACTTAAAAGCAATAACTTCACTGGCATGCTCCAGTCTCCCATGTGATTGAGGAGTTCTGACCTCAGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| 3UTR-3UTR CAA 90 bp | GAACTCCTCAATCACATGGGAGACTGGAGCATGCCAGTGAAGTTATTGCTTTTAGCTGATGAAATGCGATaGTGGAGTTTATATTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: ELLNHMGDWSMPVKLLLLADEMR*WSLYSS Trigger: TGAAGAATATAAACTCCACAATCGCATTTCATCAGC...TAAAAGCAATAACTTCACTGGCATGCTCCAGTCTCCCATGTGATTGAGGAGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS-3UTR TCA 90 bp | AGCATGGTAGGTGCTGGGCCTGTTCTCTGTAGAACACAGTGTGCTGCTGGGTGGTTAGAGTGGTCCTGGTaGAGGCAGCCAGCGTCATCC | + |
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Preference number: 4 (lower is better) Translates to: SMVGAGPVLCRTQCAAGWLEWSW*RQPASS Trigger: GGATGACGCTGGCTGCCTTCACCAGGACCACTCTAA...CCACCCAGCAGCACACTGTGTTCTACAGAGAACAGGCCCAGCACCTACCATGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS-3UTR TCA 90 bp | AGCATGGTAGGTGCTGGGCCTGTTCTCTGTAGAACACAGTGTGCTGCTGGGTGGCGGACAGCAGGAAGATaGAGCCAGGGTACCAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: SMVGAGPVLCRTQCAAGWRTAGR*SQGTRQ Trigger: TTGCCTGGTACCCTGGCTTCATCTTCCTGCTGTCCG...CCACCCAGCAGCACACTGTGTTCTACAGAGAACAGGCCCAGCACCTACCATGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS-3UTR TCA 90 bp | GCCAGCAAGCCCATTGTGCAGACGGAGAGACTGAGGTCAGAACTCCTCAATCACCGGACAGCAGGAAGATaGAGCCAGGGTACCAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: ASKPIVQTERLRSELLNHRTAGR*SQGTRQ Trigger: TTGCCTGGTACCCTGGCTTCATCTTCCTGCTGTCCG...GTGATTGAGGAGTTCTGACCTCAGTCTCTCCGTCTGCACAATGGGCTTGCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS-3UTR TCA 90 bp | GTCCATGGAGAAGTGAGCATGGTAGGTGCTGGGCCTGTTCTCTGTAGAACACAGTTAGAGTGGTCCTGGTaGAGGCAGCCAGCGTCATCC | + |
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Preference number: 4 (lower is better) Translates to: VHGEVSMVGAGPVLCRTQLEWSW*RQPASS Trigger: GGATGACGCTGGCTGCCTTCACCAGGACCACTCTAA...CTGTGTTCTACAGAGAACAGGCCCAGCACCTACCATGCTCACTTCTCCATGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS-3UTR TCA 90 bp | AGCATGGTAGGTGCTGGGCCTGTTCTCTGTAGAACACAGTGTGCTGCTGGGTGGCAGAGAGCCAAGAGATaGCAGGACCATGGGAAGTTT | + |
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Preference number: 4 (lower is better) Translates to: SMVGAGPVLCRTQCAAGWQRAKR*QDHGKF Trigger: AAACTTCCCATGGTCCTGTCATCTCTTGGCTCTCTG...CCACCCAGCAGCACACTGTGTTCTACAGAGAACAGGCCCAGCACCTACCATGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS-3UTR TCA 90 bp | AGCAAGCCCATTGTGCAGACGGAGAGACTGAGGTCAGAACTCCTCAATCACATGCGAGTGGACCACCTTTaGCAGCATGGACCTCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: SKPIVQTERLRSELLNHMRVDHL*QHGPQD Trigger: GTCCTGAGGTCCATGCTGTCAAAGGTGGTCCACTCG...CATGTGATTGAGGAGTTCTGACCTCAGTCTCTCCGTCTGCACAATGGGCTTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS-3UTR GCA 90 bp | AGCATGGTAGGTGCTGGGCCTGTTCTCTGTAGAACACAGTGTGCTGCTGGGTGGGCACTCATTTCCACCTaGAGGTTGAAGAGAGATGCC | + |
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Preference number: 4 (lower is better) Translates to: SMVGAGPVLCRTQCAAGWALIST*RLKRDA Trigger: GGCATCTCTCTTCAACCTGCAGGTGGAAATGAGTGC...CCACCCAGCAGCACACTGTGTTCTACAGAGAACAGGCCCAGCACCTACCATGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS-3UTR GCA 90 bp | CACGGGGTTTCTCTGGTCCATGGAGAAGTGAGCATGGTAGGTGCTGGGCCTGTTGCACTCATTTCCACCTaGAGGTTGAAGAGAGATGCC | + |
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Preference number: 4 (lower is better) Translates to: HGVSLVHGEVSMVGAGPVALIST*RLKRDA Trigger: GGCATCTCTCTTCAACCTGCAGGTGGAAATGAGTGC...AACAGGCCCAGCACCTACCATGCTCACTTCTCCATGGACCAGAGAAACCCCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS-3UTR CCA 90 bp | AGCATGGTAGGTGCTGGGCCTGTTCTCTGTAGAACACAGTGTGCTGCTGGGTGGGGTACCAGGCAACAGTaGCTGAGTAAATCCCACTGT | + |
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Preference number: 4 (lower is better) Translates to: SMVGAGPVLCRTQCAAGWGTRQQ*LSKSHC Trigger: ACAGTGGGATTTACTCAGCCACTGTTGCCTGGTACC...CCACCCAGCAGCACACTGTGTTCTACAGAGAACAGGCCCAGCACCTACCATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS-3UTR TCA 90 bp | CACAAGCCTTCCTCGGCTCTTCACGGGGTTTCTCTGGTCCATGGAGAAGTGAGCAGAGATGCCTTTTTCTaGACTTCCTCCCGGAATGCA | + |
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Preference number: 4 (lower is better) Translates to: HKPSSALHGVSLVHGEVSRDAFF*TSSRNA Trigger: TGCATTCCGGGAGGAAGTTCAGAAAAAGGCATCTCT...GCTCACTTCTCCATGGACCAGAGAAACCCCGTGAAGAGCCGAGGAAGGCTTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS-3UTR TCA 90 bp | AGCATGGTAGGTGCTGGGCCTGTTCTCTGTAGAACACAGTGTGCTGCTGGGTGGAGAGATGCCTTTTTCTaGACTTCCTCCCGGAATGCA | + |
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Preference number: 4 (lower is better) Translates to: SMVGAGPVLCRTQCAAGWRDAFF*TSSRNA Trigger: TGCATTCCGGGAGGAAGTTCAGAAAAAGGCATCTCT...CCACCCAGCAGCACACTGTGTTCTACAGAGAACAGGCCCAGCACCTACCATGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS-3UTR CCA 90 bp | GTCCATGGAGAAGTGAGCATGGTAGGTGCTGGGCCTGTTCTCTGTAGAACACAGGGAAGTTTCCGTCCGTaGTTGTCGCTGCTCGCTAAA | + |
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Preference number: 4 (lower is better) Translates to: VHGEVSMVGAGPVLCRTQGSFRP*LSLLAK Trigger: TTTAGCGAGCAGCGACAACCACGGACGGAAACTTCC...CTGTGTTCTACAGAGAACAGGCCCAGCACCTACCATGCTCACTTCTCCATGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS-3UTR GCA 90 bp | AGCATGGTAGGTGCTGGGCCTGTTCTCTGTAGAACACAGTGTGCTGCTGGGTGGCAAAGTAGGACATCATaGACAGCCAAGTGTTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: SMVGAGPVLCRTQCAAGWQSRTS*TAKCWY Trigger: GTACCAACACTTGGCTGTGCATGATGTCCTACTTTG...CCACCCAGCAGCACACTGTGTTCTACAGAGAACAGGCCCAGCACCTACCATGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS-3UTR CCA 90 bp | AGCAAGCCCATTGTGCAGACGGAGAGACTGAGGTCAGAACTCCTCAATCACATGGGAAGTTTCCGTCCGTaGTTGTCGCTGCTCGCTAAA | + |
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Preference number: 4 (lower is better) Translates to: SKPIVQTERLRSELLNHMGSFRP*LSLLAK Trigger: TTTAGCGAGCAGCGACAACCACGGACGGAAACTTCC...CATGTGATTGAGGAGTTCTGACCTCAGTCTCTCCGTCTGCACAATGGGCTTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS-3UTR TCA 90 bp | AGCAAGCCCATTGTGCAGACGGAGAGACTGAGGTCAGAACTCCTCAATCACATGCAGAGAGCCAAGAGATaGCAGGACCATGGGAAGTTT | + |
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Preference number: 4 (lower is better) Translates to: SKPIVQTERLRSELLNHMQRAKR*QDHGKF Trigger: AAACTTCCCATGGTCCTGTCATCTCTTGGCTCTCTG...CATGTGATTGAGGAGTTCTGACCTCAGTCTCTCCGTCTGCACAATGGGCTTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS-3UTR GCA 90 bp | GCCAGCAAGCCCATTGTGCAGACGGAGAGACTGAGGTCAGAACTCCTCAATCACCACACTCAGAGCCATTaGTATTGGAAGCAAAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: ASKPIVQTERLRSELLNHHTQSH*YWKQRC Trigger: ACACCTTTGCTTCCAATAGCAATGGCTCTGAGTGTG...GTGATTGAGGAGTTCTGACCTCAGTCTCTCCGTCTGCACAATGGGCTTGCTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS-3UTR GCA 90 bp | AGCATGGTAGGTGCTGGGCCTGTTCTCTGTAGAACACAGTGTGCTGCTGGGTGGCAGGTTGAAGAGAGATaGCTTTTTCTGAACTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: SMVGAGPVLCRTQCAAGWQVEER*LFLNFL Trigger: GAGGAAGTTCAGAAAAAGGCATCTCTCTTCAACCTG...CCACCCAGCAGCACACTGTGTTCTACAGAGAACAGGCCCAGCACCTACCATGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS-3UTR TCA 90 bp | CACGGGGTTTCTCTGGTCCATGGAGAAGTGAGCATGGTAGGTGCTGGGCCTGTTAAGGCTTTCGATACATaGCATAGTCACAATCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: HGVSLVHGEVSMVGAGPVKAFDT*HSHNLR Trigger: TCTCAGATTGTGACTATGTCATGTATCGAAAGCCTT...AACAGGCCCAGCACCTACCATGCTCACTTCTCCATGGACCAGAGAAACCCCGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS-3UTR TCA 90 bp | GAACTCCTCAATCACATGGGAGACTGGAGCATGCCAGTGAAGTTATTGCTTTTACGAGTGGACCACCTTTaGCAGCATGGACCTCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: ELLNHMGDWSMPVKLLLLRVDHL*QHGPQD Trigger: GTCCTGAGGTCCATGCTGTCAAAGGTGGTCCACTCG...TAAAAGCAATAACTTCACTGGCATGCTCCAGTCTCCCATGTGATTGAGGAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS-3UTR GCA 90 bp | GCCCATTGTGCAGACGGAGAGACTGAGGTCAGAACTCCTCAATCACATGGGAGAAACTTCCTCCCGGAATaGAAAGATGGAGCTGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: AHCADGETEVRTPQSHGRNFLPE*KDGAAF Trigger: AAAAGCAGCTCCATCTTTGCATTCCGGGAGGAAGTT...TCTCCCATGTGATTGAGGAGTTCTGACCTCAGTCTCTCCGTCTGCACAATGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS-3UTR GCA 90 bp | GCCCATTGTGCAGACGGAGAGACTGAGGTCAGAACTCCTCAATCACATGGGAGACAAAGTAGGACATCATaGACAGCCAAGTGTTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: AHCADGETEVRTPQSHGRQSRTS*TAKCWY Trigger: GTACCAACACTTGGCTGTGCATGATGTCCTACTTTG...TCTCCCATGTGATTGAGGAGTTCTGACCTCAGTCTCTCCGTCTGCACAATGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS-3UTR CCA 90 bp | GCCAGCAAGCCCATTGTGCAGACGGAGAGACTGAGGTCAGAACTCCTCAATCACCAGAGCCATTGCTATTaGAAGCAAAGGTGTAGTTAC | + |
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Preference number: 4 (lower is better) Translates to: ASKPIVQTERLRSELLNHQSHCY*KQRCSY Trigger: GTAACTACACCTTTGCTTCCAATAGCAATGGCTCTG...GTGATTGAGGAGTTCTGACCTCAGTCTCTCCGTCTGCACAATGGGCTTGCTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS-3UTR GCA 90 bp | AGCAAGCCCATTGTGCAGACGGAGAGACTGAGGTCAGAACTCCTCAATCACATGCACACTCAGAGCCATTaGTATTGGAAGCAAAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: SKPIVQTERLRSELLNHMHTQSH*YWKQRC Trigger: ACACCTTTGCTTCCAATAGCAATGGCTCTGAGTGTG...CATGTGATTGAGGAGTTCTGACCTCAGTCTCTCCGTCTGCACAATGGGCTTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS-3UTR CCA 90 bp | GTCCATGGAGAAGTGAGCATGGTAGGTGCTGGGCCTGTTCTCTGTAGAACACAGCAGAGCCATTGCTATTaGAAGCAAAGGTGTAGTTAC | + |
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Preference number: 4 (lower is better) Translates to: VHGEVSMVGAGPVLCRTQQSHCY*KQRCSY Trigger: GTAACTACACCTTTGCTTCCAATAGCAATGGCTCTG...CTGTGTTCTACAGAGAACAGGCCCAGCACCTACCATGCTCACTTCTCCATGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS-3UTR GCA 90 bp | GTCCATGGAGAAGTGAGCATGGTAGGTGCTGGGCCTGTTCTCTGTAGAACACAGATGCAAAGATGGAGCTaGTTTTGTTTTGGTCACACT | + |
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Preference number: 4 (lower is better) Translates to: VHGEVSMVGAGPVLCRTQMQRWS*FCFGHT Trigger: AGTGTGACCAAAACAAAAGCAGCTCCATCTTTGCAT...CTGTGTTCTACAGAGAACAGGCCCAGCACCTACCATGCTCACTTCTCCATGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS-3UTR GCA 90 bp | AGCAAGCCCATTGTGCAGACGGAGAGACTGAGGTCAGAACTCCTCAATCACATGCAGGTTGAAGAGAGATaGCTTTTTCTGAACTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: SKPIVQTERLRSELLNHMQVEER*LFLNFL Trigger: GAGGAAGTTCAGAAAAAGGCATCTCTCTTCAACCTG...CATGTGATTGAGGAGTTCTGACCTCAGTCTCTCCGTCTGCACAATGGGCTTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| 3UTR CAA 72 bp | CAGGGTTTTGTCCTGTGGATTGCTGATGAAATGCGATaGTGGAGTTTATATTCTTCAGGAGTTGCGCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: QGFVLWIADEMR*WSLYSSGVAQR Trigger: CCTCTGCGCAACTCCTGAAGAATATAAACTCCACAATCGCATTTCATCAGCAATCCACAGGACAAAACCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS-3UTR GCA 90 bp | GAACTCCTCAATCACATGGGAGACTGGAGCATGCCAGTGAAGTTATTGCTTTTAATGCAAAGATGGAGCTaGTTTTGTTTTGGTCACACT | + |
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Preference number: 4 (lower is better) Translates to: ELLNHMGDWSMPVKLLLLMQRWS*FCFGHT Trigger: AGTGTGACCAAAACAAAAGCAGCTCCATCTTTGCAT...TAAAAGCAATAACTTCACTGGCATGCTCCAGTCTCCCATGTGATTGAGGAGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| 3UTR CAA 72 bp | AATCACATGGGAGACTGGAGCATGCCAGTGAAGTTATaGCTTTTAAGTTTTAACAAGGTTCACAAGCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: NHMGDWSMPVKL*LLSFNKVHKPS Trigger: GGAAGGCTTGTGAACCTTGTTAAAACTTAAAAGCAATAACTTCACTGGCATGCTCCAGTCTCCCATGTGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS TCA 90 bp | AGCGGACAGCAGGAAGATGAAGCCAGGGTACCAGGCAACAGTGGCTaGGTAAATCCCACTGTACGCAGAGGTCGAAGTGACCCCAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: SGQQEDEARVPGNSG*VNPTVRRGRSDPSQ Trigger: CTGGCTGGGGTCACTTCGACCTCTGCGTACAGTGGGATTTACTCAGCCACTGTTGCCTGGTACCCTGGCTTCATCTTCCTGCTGTCCGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS-3UTR CAA 90 bp | GCCAGCAAGCCCATTGTGCAGACGGAGAGACTGAGGTCAGAACTCCTCAATCACATGCACAGCCAAGTGTaGGTACCCAGAGAGCCAAGA | + |
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Preference number: 5 (lower is better) Translates to: ASKPIVQTERLRSELLNHMHSQV*VPREPR Trigger: TCTTGGCTCTCTGGGTACCAACACTTGGCTGTGCAT...GTGATTGAGGAGTTCTGACCTCAGTCTCTCCGTCTGCACAATGGGCTTGCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS-3UTR CAA 90 bp | AGCATGGTAGGTGCTGGGCCTGTTCTCTGTAGAACACAGTGTGCTGCTGGGTGGGGAGCTGCTTTTGTTTaGGTCACACTCAGAGCCATT | + |
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Preference number: 5 (lower is better) Translates to: SMVGAGPVLCRTQCAAGWGAAFV*VTLRAI Trigger: AATGGCTCTGAGTGTGACCAAAACAAAAGCAGCTCC...CCACCCAGCAGCACACTGTGTTCTACAGAGAACAGGCCCAGCACCTACCATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS-3UTR CAA 90 bp | GTCCATGGAGAAGTGAGCATGGTAGGTGCTGGGCCTGTTCTCTGTAGAACACAGATGCACAGCCAAGTGTaGGTACCCAGAGAGCCAAGA | + |
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Preference number: 5 (lower is better) Translates to: VHGEVSMVGAGPVLCRTQMHSQV*VPREPR Trigger: TCTTGGCTCTCTGGGTACCAACACTTGGCTGTGCAT...CTGTGTTCTACAGAGAACAGGCCCAGCACCTACCATGCTCACTTCTCCATGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS GCA 90 bp | CCAGCCAGCGTTTCTAAGAAAGCTATACAAGCAAACAACGCACCTTaGTCAGTCGAGTGGACCACCTTTGACAGCATGGACCTCAGGACG | + |
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Preference number: 5 (lower is better) Translates to: PASVSKKAIQANNAP*SVEWTTFDSMDLRT Trigger: CGTCCTGAGGTCCATGCTGTCAAAGGTGGTCCACTCGACTGAGCAAGGTGCGTTGTTTGCTTGTATAGCTTTCTTAGAAACGCTGGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS-3UTR CAA 90 bp | AGCATGGTAGGTGCTGGGCCTGTTCTCTGTAGAACACAGTGTGCTGCTGGGTGGAAGATGGAGCTGCTTTaGTTTTGGTCACACTCAGAG | + |
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Preference number: 5 (lower is better) Translates to: SMVGAGPVLCRTQCAAGWKMELL*FWSHSE Trigger: CTCTGAGTGTGACCAAAACAAAAGCAGCTCCATCTT...CCACCCAGCAGCACACTGTGTTCTACAGAGAACAGGCCCAGCACCTACCATGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS-3UTR CAA 90 bp | AGCATGGTAGGTGCTGGGCCTGTTCTCTGTAGAACACAGTGTGCTGCTGGGTGGATTTCCACCTGCAGGTaGAAGAGAGATGCCTTTTTC | + |
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Preference number: 5 (lower is better) Translates to: SMVGAGPVLCRTQCAAGWISTCR*KRDAFF Trigger: GAAAAAGGCATCTCTCTTCAACCTGCAGGTGGAAAT...CCACCCAGCAGCACACTGTGTTCTACAGAGAACAGGCCCAGCACCTACCATGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS TCA 90 bp | AGGCAACAGTGGCTGAGTAAATCCCACTGTACGCAGAGGTCGAAGTaGCCCCAGCCAGCGTTTCTAAGAAAGCTATACAAGCAAACAACG | + |
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Preference number: 5 (lower is better) Translates to: RQQWLSKSHCTQRSK*PQPAFLRKLYKQTT Trigger: CGTTGTTTGCTTGTATAGCTTTCTTAGAAACGCTGGCTGGGGTCACTTCGACCTCTGCGTACAGTGGGATTTACTCAGCCACTGTTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS GCA 90 bp | TGGATGCTATCAGAAGCTGGAGAGGAAGGTCAAAGTAGGACATCATaGACAGCCAAGTGTTGGTACCCAGAGAGCCAAGAGATGACAGGA | + |
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Preference number: 5 (lower is better) Translates to: WMLSEAGEEGQSRTS*TAKCWYPESQEMTG Trigger: TCCTGTCATCTCTTGGCTCTCTGGGTACCAACACTTGGCTGTGCATGATGTCCTACTTTGACCTTCCTCTCCAGCTTCTGATAGCATCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS CCA 90 bp | TCTAAGAAAGCTATACAAGCAAACAACGCACCTTGCTCAGTCGAGTaGACCACCTTTGACAGCATGGACCTCAGGACGGAAAGTGGCATG | + |
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Preference number: 5 (lower is better) Translates to: SKKAIQANNAPCSVE*TTFDSMDLRTESGM Trigger: CATGCCACTTTCCGTCCTGAGGTCCATGCTGTCAAAGGTGGTCCACTCGACTGAGCAAGGTGCGTTGTTTGCTTGTATAGCTTTCTTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS-3UTR CAA 90 bp | AGCAAGCCCATTGTGCAGACGGAGAGACTGAGGTCAGAACTCCTCAATCACATGGGAGCTGCTTTTGTTTaGGTCACACTCAGAGCCATT | + |
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Preference number: 5 (lower is better) Translates to: SKPIVQTERLRSELLNHMGAAFV*VTLRAI Trigger: AATGGCTCTGAGTGTGACCAAAACAAAAGCAGCTCC...CATGTGATTGAGGAGTTCTGACCTCAGTCTCTCCGTCTGCACAATGGGCTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS-3UTR CAA 90 bp | GCCCATTGTGCAGACGGAGAGACTGAGGTCAGAACTCCTCAATCACATGGGAGAAAGATGGAGCTGCTTTaGTTTTGGTCACACTCAGAG | + |
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Preference number: 5 (lower is better) Translates to: AHCADGETEVRTPQSHGRKMELL*FWSHSE Trigger: CTCTGAGTGTGACCAAAACAAAAGCAGCTCCATCTT...TCTCCCATGTGATTGAGGAGTTCTGACCTCAGTCTCTCCGTCTGCACAATGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS GCA 90 bp | AAGAAAATAGCCAGATGCCTAGGAAACTACTTAAAAAGGAGACACTaGCCAGAGCTGAACCATAGCCTATGTAAACCTCATTCCAGCAGA | + |
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Preference number: 5 (lower is better) Translates to: KKIARCLGNYLKRRH*PELNHSLCKPHSSR Trigger: TCTGCTGGAATGAGGTTTACATAGGCTATGGTTCAGCTCTGGGCAGTGTCTCCTTTTTAAGTAGTTTCCTAGGCATCTGGCTATTTTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS TCA 72 bp | GCACAGCCAAGTGTTGGTACCCAGAGAGCCAAGAGATaGCAGGACCATGGGAAGTTTCCGTCCGTGGTTGTC | + |
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Preference number: 6 (lower is better) Translates to: AQPSVGTQRAKR*QDHGKFPSVVV Trigger: GACAACCACGGACGGAAACTTCCCATGGTCCTGTCATCTCTTGGCTCTCTGGGTACCAACACTTGGCTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS GCA 72 bp | TTACCGGTTTCCTCCCAGATCCTCCGGTACACGTACTaGGCTGTCAGCGGGATGGTCAGAGTCATAGCAAAC | + |
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Preference number: 6 (lower is better) Translates to: LPVSSQILRYTY*AVSGMVRVIAN Trigger: GTTTGCTATGACTCTGACCATCCCGCTGACAGCGCAGTACGTGTACCGGAGGATCTGGGAGGAAACCGGTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 ENSMUST00000138244.2 |
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| CDS TCA 72 bp | CAGGAAGATGAAGCCAGGGTACCAGGCAACAGTGGCTaGGTAAATCCCACTGTACGCAGAGGTCGAAGTGAC | + |
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Preference number: 6 (lower is better) Translates to: QEDEARVPGNSG*VNPTVRRGRSD Trigger: GTCACTTCGACCTCTGCGTACAGTGGGATTTACTCAGCCACTGTTGCCTGGTACCCTGGCTTCATCTTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS CAA 72 bp | AGAGATGACAGGACCATGGGAAGTTTCCGTCCGTGGTaGTCGCTGCTCGCTAAAAGCATGAAGGTAGACACC | + |
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Preference number: 6 (lower is better) Translates to: RDDRTMGSFRPW*SLLAKSMKVDT Trigger: GGTGTCTACCTTCATGCTTTTAGCGAGCAGCGACAACCACGGACGGAAACTTCCCATGGTCCTGTCATCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS CCA 72 bp | GAAGGTCAAAGTAGGACATCATGCACAGCCAAGTGTTaGTACCCAGAGAGCCAAGAGATGACAGGACCATGG | + |
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Preference number: 6 (lower is better) Translates to: EGQSRTSCTAKC*YPESQEMTGPW Trigger: CCATGGTCCTGTCATCTCTTGGCTCTCTGGGTACCAACACTTGGCTGTGCATGATGTCCTACTTTGACCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS TCA 72 bp | TGGCTGAGTAAATCCCACTGTACGCAGAGGTCGAAGTaGCCCCAGCCAGCGTTTCTAAGAAAGCTATACAAG | + |
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Preference number: 6 (lower is better) Translates to: WLSKSHCTQRSK*PQPAFLRKLYK Trigger: CTTGTATAGCTTTCTTAGAAACGCTGGCTGGGGTCACTTCGACCTCTGCGTACAGTGGGATTTACTCAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS TCA 72 bp | GACCAGGAATTAAGGCACTCATTTCCACCTGCAGGTTaGAGAGAGATGCCTTTTTCTGAACTTCCTCCCGGA | + |
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Preference number: 6 (lower is better) Translates to: DQELRHSFPPAG*REMPFSELPPG Trigger: TCCGGGAGGAAGTTCAGAAAAAGGCATCTCTCTTCAACCTGCAGGTGGAAATGAGTGCCTTAATTCCTGGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS TCA 72 bp | ATTTCCACCTGCAGGTTGAAGAGAGATGCCTTTTTCTaGACTTCCTCCCGGAATGCAAAGATGGAGCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: ISTCRLKRDAFF*TSSRNAKMELL Trigger: AAGCAGCTCCATCTTTGCATTCCGGGAGGAAGTTCAGAAAAAGGCATCTCTCTTCAACCTGCAGGTGGAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS GCA 72 bp | GTTTCTAAGAAAGCTATACAAGCAAACAACGCACCTTaGTCAGTCGAGTGGACCACCTTTGACAGCATGGAC | + |
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Preference number: 6 (lower is better) Translates to: VSKKAIQANNAP*SVEWTTFDSMD Trigger: GTCCATGCTGTCAAAGGTGGTCCACTCGACTGAGCAAGGTGCGTTGTTTGCTTGTATAGCTTTCTTAGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS GCA 72 bp | GCCAGATGCCTAGGAAACTACTTAAAAAGGAGACACTaGCCAGAGCTGAACCATAGCCTATGTAAACCTCAT | + |
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Preference number: 6 (lower is better) Translates to: ARCLGNYLKRRH*PELNHSLCKPH Trigger: ATGAGGTTTACATAGGCTATGGTTCAGCTCTGGGCAGTGTCTCCTTTTTAAGTAGTTTCCTAGGCATCTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS CAA 72 bp | TTCCTCCCGGAATGCAAAGATGGAGCTGCTTTTGTTTaGGTCACACTCAGAGCCATTGCTATTGGAAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: FLPECKDGAAFV*VTLRAIAIGSK Trigger: TTTGCTTCCAATAGCAATGGCTCTGAGTGTGACCAAAACAAAAGCAGCTCCATCTTTGCATTCCGGGAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS CAA 90 bp | TTTCTGAACTTCCTCCCGGAATGCAAAGATGGAGCTGCTTTTGTTTaGGTCACACTCAGAGCCATTGCTATTGGAAGCAAAGGTGTAGTT | + |
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Preference number: 6 (lower is better) Translates to: FLNFLPECKDGAAFV*VTLRAIAIGSKGVV Trigger: AACTACACCTTTGCTTCCAATAGCAATGGCTCTGAGTGTGACCAAAACAAAAGCAGCTCCATCTTTGCATTCCGGGAGGAAGTTCAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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| CDS CCA 72 bp | GCAGAGCGGAGGGCCCAGCTCATAAAGTGTAAAAATTaGGGAGATTCCGATTATCACAAAGAAATAAATGAC | + |
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Preference number: 6 (lower is better) Translates to: AERRAQLIKCKN*GDSDYHKEIND Trigger: GTCATTTATTTCTTTGTGATAATCGGAATCTCCCCAATTTTTACACTTTATGAGCTGGGCCCTCCGCTCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031655.4 ENSMUST00000118527.8 |
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