Pregenerated sensors for SLC46A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028386Ensembl transcript IDs: ENSMUST00000030081.2
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGATTTTCCCTCCCACCAGGGACCTGCAGGCCAAAGCAGGTTATTaGAAGACTGGAGCTTGGGTTTCACAGGCAGAACCTGGTTATGGC | + |
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Preference number: 1 (lower is better) Translates to: VIFPPTRDLQAKAGY*KTGAWVSQAEPGYG Trigger: GCCATAACCAGGTTCTGCCTGTGAAACCCAAGCTCCAGTCTTCCAATAACCTGCTTTGGCCTGCAGGTCCCTGGTGGGAGGGAAAATCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR CCA 90 bp | AACACCTGTGCAAGCAGCTGGTACACACAGACCTCAACCTCAGCCTaGCAGAGGCATCTGAGAACTAGGAAATCTTCTCCAACACCCAGA | + |
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Preference number: 1 (lower is better) Translates to: NTCASSWYTQTSTSA*QRHLRTRKSSPTPR Trigger: TCTGGGTGTTGGAGAAGATTTCCTAGTTCTCAGATGCCTCTGCCAGGCTGAGGTTGAGGTCTGTGTGTACCAGCTGCTTGCACAGGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR TCA 90 bp | GCAGCTGGTACACACAGACCTCAACCTCAGCCTGGCAGAGGCATCTaGGAACTAGGAAATCTTCTCCAACACCCAGAAAGTGATTTTCCC | + |
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Preference number: 1 (lower is better) Translates to: AAGTHRPQPQPGRGI*ELGNLLQHPESDFP Trigger: GGGAAAATCACTTTCTGGGTGTTGGAGAAGATTTCCTAGTTCTCAGATGCCTCTGCCAGGCTGAGGTTGAGGTCTGTGTGTACCAGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR TCA 90 bp | CAGAGGCATCTGAGAACTAGGAAATCTTCTCCAACACCCAGAAAGTaGTTTTCCCTCCCACCAGGGACCTGCAGGCCAAAGCAGGTTATT | + |
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Preference number: 1 (lower is better) Translates to: QRHLRTRKSSPTPRK*FSLPPGTCRPKQVI Trigger: AATAACCTGCTTTGGCCTGCAGGTCCCTGGTGGGAGGGAAAATCACTTTCTGGGTGTTGGAGAAGATTTCCTAGTTCTCAGATGCCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR TCA 90 bp | TCTATTGGTGGTGGGTGCTGTTCCTGGGTTTGTTTTTGCTGTTTTTaGGGCAGGATTCTGTGTATTCCTGGCTGGTCTCAGACCGGCCAT | + |
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Preference number: 1 (lower is better) Translates to: SIGGGCCSWVCFCCF*GRILCIPGWSQTGH Trigger: ATGGCCGGTCTGAGACCAGCCAGGAATACACAGAATCCTGCCTCAAAAACAGCAAAAACAAACCCAGGAACAGCACCCACCACCAATAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR CCA 90 bp | GTGTATTCCACTAAGGAAGTCTGCTGGGATTGCTGGGAAGTCTGCTaGTGGGTTTTGTTTTCTATTGGTGGTGGGTGCTGTTCCTGGGTT | + |
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Preference number: 1 (lower is better) Translates to: VYSTKEVCWDCWEVC*WVLFSIGGGCCSWV Trigger: AACCCAGGAACAGCACCCACCACCAATAGAAAACAAAACCCACCAGCAGACTTCCCAGCAATCCCAGCAGACTTCCTTAGTGGAATACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR CCA 90 bp | TATTCCACTAAGGAAGTCTGCTGGGATTGCTGGGAAGTCTGCTGGTaGGTTTTGTTTTCTATTGGTGGTGGGTGCTGTTCCTGGGTTTGT | + |
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Preference number: 1 (lower is better) Translates to: YSTKEVCWDCWEVCW*VLFSIGGGCCSWVC Trigger: ACAAACCCAGGAACAGCACCCACCACCAATAGAAAACAAAACCCACCAGCAGACTTCCCAGCAATCCCAGCAGACTTCCTTAGTGGAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGCACTGTTTTCTCAGAGGACACAGTCTGAATTCAGTTCCCAGTCCCTGTGTAGGGGGCTGGCTGGCTaGAGCCCGAAGCCCTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: LALFSQRTQSEFSSQSLCRGLAG*SPKPSR Trigger: CCTGGAGGGCTTCGGGCTCCAGCCAGCCAGCCCCCT...ACACAGGGACTGGGAACTGAATTCAGACTGTGTCCTCTGAGAAAACAGTGCAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR-3UTR CCA 90 bp | GGACACAGTCTGAATTCAGTTCCCAGTCCCTGTGTCAGGCAACTCAGAACACTGATGAGAAAAGGGGGCTaGCTGGCTGGAGCCCGAAGC | + |
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Preference number: 2 (lower is better) Translates to: GHSLNSVPSPCVRQLRTLMRKGG*LAGARS Trigger: GCTTCGGGCTCCAGCCAGCCAGCCCCCTTTTCTCAT...CAGTGTTCTGAGTTGCCTGACACAGGGACTGGGAACTGAATTCAGACTGTGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR-3UTR CCA 90 bp | GTCCCTGTGTCAGGCAACTCAGAACACTGTAACTCTAGCTCCAGGGGATCCCAGACCTGTGCAAGCAGCTaGTACACACAGACCTCAACC | + |
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Preference number: 2 (lower is better) Translates to: VPVSGNSEHCNSSSRGSQTCASS*YTQTST Trigger: GGTTGAGGTCTGTGTGTACCAGCTGCTTGCACAGGT...CTGGGATCCCCTGGAGCTAGAGTTACAGTGTTCTGAGTTGCCTGACACAGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR-3UTR TCA 90 bp | GCCAGTCTTCTCAGCATATTGAGTTCCAGGTCAACCAAGGCTACATCCCCTGTCCCAACACCCAGAAAGTaGTTTTCCCTCCCACCAGGG | + |
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Preference number: 2 (lower is better) Translates to: ASLLSILSSRSTKATSPVPTPRK*FSLPPG Trigger: CCCTGGTGGGAGGGAAAATCACTTTCTGGGTGTTGG...GACAGGGGATGTAGCCTTGGTTGACCTGGAACTCAATATGCTGAGAAGACTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR-3UTR GCA 90 bp | CTCAGAGGACACAGTCTGAATTCAGTTCCCAGTCCCTGTGTCAGGCAACTCAGACTCCCACCAGGGACCTaGAGGCCAAAGCAGGTTATT | + |
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Preference number: 2 (lower is better) Translates to: LRGHSLNSVPSPCVRQLRLPPGT*RPKQVI Trigger: AATAACCTGCTTTGGCCTGCAGGTCCCTGGTGGGAG...TCTGAGTTGCCTGACACAGGGACTGGGAACTGAATTCAGACTGTGTCCTCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR-3UTR TCA 90 bp | AACTCTAGCTCCAGGGGATCCCAGAACCTCTGGGCCTTCTCATCCACACTCAATCCTGGCAGAGGCATCTaGGAACTAGGAAATCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: NSSSRGSQNLWAFSSTLNPGRGI*ELGNLL Trigger: GAGAAGATTTCCTAGTTCTCAGATGCCTCTGCCAGG...ATTGAGTGTGGATGAGAAGGCCCAGAGGTTCTGGGATCCCCTGGAGCTAGAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTGGTACACACAGACCTCAACCTCAGCCTGGCAGAGGCATCTGAGAACTAGGAGGTTATTGGAAGACTaGAGCTTGGGTTTCACAGGC | + |
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Preference number: 2 (lower is better) Translates to: SWYTQTSTSAWQRHLRTRRLLED*SLGFTG Trigger: GCCTGTGAAACCCAAGCTCCAGTCTTCCAATAACCT...CCTAGTTCTCAGATGCCTCTGCCAGGCTGAGGTTGAGGTCTGTGTGTACCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTGGTACACACAGACCTCAACCTCAGCCTGGCAGAGGCATCTGAGAACTAGGGCCAAAGCAGGTTATTaGAAGACTGGAGCTTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: SWYTQTSTSAWQRHLRTRAKAGY*KTGAWV Trigger: AACCCAAGCTCCAGTCTTCCAATAACCTGCTTTGGC...CCTAGTTCTCAGATGCCTCTGCCAGGCTGAGGTTGAGGTCTGTGTGTACCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR-3UTR CCA 90 bp | GGACACAGTCTGAATTCAGTTCCCAGTCCCTGTGTCAGGCAACTCAGAACACTGACCTCAACCTCAGCCTaGCAGAGGCATCTGAGAACT | + |
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Preference number: 2 (lower is better) Translates to: GHSLNSVPSPCVRQLRTLTSTSA*QRHLRT Trigger: AGTTCTCAGATGCCTCTGCCAGGCTGAGGTTGAGGT...CAGTGTTCTGAGTTGCCTGACACAGGGACTGGGAACTGAATTCAGACTGTGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR-3UTR CCA 90 bp | AACTCTAGCTCCAGGGGATCCCAGAACCTCTGGGCCTTCTCATCCACACTCAATCTGTGTATTCCTGGCTaGTCTCAGACCGGCCATATA | + |
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Preference number: 2 (lower is better) Translates to: NSSSRGSQNLWAFSSTLNLCIPG*SQTGHI Trigger: TATATGGCCGGTCTGAGACCAGCCAGGAATACACAG...ATTGAGTGTGGATGAGAAGGCCCAGAGGTTCTGGGATCCCCTGGAGCTAGAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR-3UTR GCA 90 bp | CTCAGAGGACACAGTCTGAATTCAGTTCCCAGTCCCTGTGTCAGGCAACTCAGAGATCCAGAACACCTGTaGAAGCAGCTGGTACACACA | + |
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Preference number: 2 (lower is better) Translates to: LRGHSLNSVPSPCVRQLRDPEHL*KQLVHT Trigger: TGTGTGTACCAGCTGCTTGCACAGGTGTTCTGGATC...TCTGAGTTGCCTGACACAGGGACTGGGAACTGAATTCAGACTGTGTCCTCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR CAA 90 bp | TTCTATTGGTGGTGGGTGCTGTTCCTGGGTTTGTTTTTGCTGTTTTaGAGGCAGGATTCTGTGTATTCCTGGCTGGTCTCAGACCGGCCA | + |
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Preference number: 2 (lower is better) Translates to: FYWWWVLFLGLFLLF*RQDSVYSWLVSDRP Trigger: TGGCCGGTCTGAGACCAGCCAGGAATACACAGAATCCTGCCTCAAAAACAGCAAAAACAAACCCAGGAACAGCACCCACCACCAATAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR CAA 90 bp | ACTAAGGAAGTCTGCTGGGATTGCTGGGAAGTCTGCTGGTGGGTTTaGTTTTCTATTGGTGGTGGGTGCTGTTCCTGGGTTTGTTTTTGC | + |
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Preference number: 2 (lower is better) Translates to: TKEVCWDCWEVCWWV*FSIGGGCCSWVCFC Trigger: GCAAAAACAAACCCAGGAACAGCACCCACCACCAATAGAAAACAAAACCCACCAGCAGACTTCCCAGCAATCCCAGCAGACTTCCTTAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR-3UTR GCA 90 bp | AAGAGCTTTCTTGCACTGTTTTCTCAGAGGACACAGTCTGAATTCAGTTCCCAGGGGATTACGGGTGTGTaGGACCATGCCTGGCTTATG | + |
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Preference number: 2 (lower is better) Translates to: KSFLALFSQRTQSEFSSQGITGV*DHAWLM Trigger: CATAAGCCAGGCATGGTCGCACACACCCGTAATCCC...CTGGGAACTGAATTCAGACTGTGTCCTCTGAGAAAACAGTGCAAGAAAGCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGCACTGTTTTCTCAGAGGACACAGTCTGAATTCAGTTCCCAGTCCCTGTGTGTTTTCTATTGGTGGTaGGTGCTGTTCCTGGGTTTG | + |
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Preference number: 2 (lower is better) Translates to: LALFSQRTQSEFSSQSLCVFYWW*VLFLGL Trigger: CAAACCCAGGAACAGCACCCACCACCAATAGAAAAC...ACACAGGGACTGGGAACTGAATTCAGACTGTGTCCTCTGAGAAAACAGTGCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR-3UTR CCA 90 bp | GGACACAGTCTGAATTCAGTTCCCAGTCCCTGTGTCAGGCAACTCAGAACACTGTGGGAAGTCTGCTGGTaGGTTTTGTTTTCTATTGGT | + |
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Preference number: 2 (lower is better) Translates to: GHSLNSVPSPCVRQLRTLWEVCW*VLFSIG Trigger: ACCAATAGAAAACAAAACCCACCAGCAGACTTCCCA...CAGTGTTCTGAGTTGCCTGACACAGGGACTGGGAACTGAATTCAGACTGTGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR-3UTR TCA 90 bp | GAGAAAGAGGCTCAGTGTAAAGAGCTTTCTTGCACTGTTTTCTCAGAGGACACACAGCAGATATCACCTTaGCTTCCAGCTGAGGAATGC | + |
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Preference number: 2 (lower is better) Translates to: EKEAQCKELSCTVFSEDTQQISP*LPAEEC Trigger: GCATTCCTCAGCTGGAAGTCAAGGTGATATCTGCTG...TGTGTCCTCTGAGAAAACAGTGCAAGAAAGCTCTTTACACTGAGCCTCTTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAAAGAGGCTCAGTGTAAAGAGCTTTCTTGCACTGTTTTCTCAGAGGACACATGGAAGACTGGAGCTTaGGTTTCACAGGCAGAACCT | + |
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Preference number: 2 (lower is better) Translates to: EKEAQCKELSCTVFSEDTWKTGA*VSQAEP Trigger: AGGTTCTGCCTGTGAAACCCAAGCTCCAGTCTTCCA...TGTGTCCTCTGAGAAAACAGTGCAAGAAAGCTCTTTACACTGAGCCTCTTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR-3UTR CCA 90 bp | GCCAGTCTTCTCAGCATATTGAGTTCCAGGTCAACCAAGGCTACATCCCCTGTCTCATTCCCCTTGGGTTaGTTAAATTTAGGCTTTAGT | + |
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Preference number: 2 (lower is better) Translates to: ASLLSILSSRSTKATSPVSFPLG*LNLGFS Trigger: ACTAAAGCCTAAATTTAACCAACCCAAGGGGAATGA...GACAGGGGATGTAGCCTTGGTTGACCTGGAACTCAATATGCTGAGAAGACTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR CCA 72 bp | CCTCCCACCAGGGACCTGCAGGCCAAAGCAGGTTATTaGAAGACTGGAGCTTGGGTTTCACAGGCAGAACCT | + |
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Preference number: 3 (lower is better) Translates to: PPTRDLQAKAGY*KTGAWVSQAEP Trigger: AGGTTCTGCCTGTGAAACCCAAGCTCCAGTCTTCCAATAACCTGCTTTGGCCTGCAGGTCCCTGGTGGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR CCA 72 bp | CAGGGACCTGCAGGCCAAAGCAGGTTATTGGAAGACTaGAGCTTGGGTTTCACAGGCAGAACCTGGTTATGG | + |
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Preference number: 3 (lower is better) Translates to: QGPAGQSRLLED*SLGFTGRTWLW Trigger: CCATAACCAGGTTCTGCCTGTGAAACCCAAGCTCCAGTCTTCCAATAACCTGCTTTGGCCTGCAGGTCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR-3UTR CAA 90 bp | GCCAGTCTTCTCAGCATATTGAGTTCCAGGTCAACCAAGGCTACATCCCCTGTCGGCCAAAGCAGGTTATaGGAAGACTGGAGCTTGGGT | + |
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Preference number: 3 (lower is better) Translates to: ASLLSILSSRSTKATSPVGQSRL*EDWSLG Trigger: ACCCAAGCTCCAGTCTTCCAATAACCTGCTTTGGCC...GACAGGGGATGTAGCCTTGGTTGACCTGGAACTCAATATGCTGAGAAGACTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR TCA 72 bp | CTGAGAACTAGGAAATCTTCTCCAACACCCAGAAAGTaGTTTTCCCTCCCACCAGGGACCTGCAGGCCAAAG | + |
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Preference number: 3 (lower is better) Translates to: LRTRKSSPTPRK*FSLPPGTCRPK Trigger: CTTTGGCCTGCAGGTCCCTGGTGGGAGGGAAAATCACTTTCTGGGTGTTGGAGAAGATTTCCTAGTTCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR GCA 72 bp | TCCACTAAGGAAGTCTGCTGGGATTGCTGGGAAGTCTaGTGGTGGGTTTTGTTTTCTATTGGTGGTGGGTGC | + |
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Preference number: 3 (lower is better) Translates to: STKEVCWDCWEV*WWVLFSIGGGC Trigger: GCACCCACCACCAATAGAAAACAAAACCCACCAGCAGACTTCCCAGCAATCCCAGCAGACTTCCTTAGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR CCA 72 bp | GCTGGATGTAGGGTACACACTTGTTATCCCAGCACATaGGAGAAAGGTAGGCAGATCTCTGAGTTTGAGGCC | + |
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Preference number: 3 (lower is better) Translates to: AGCRVHTCYPST*EKGRQISEFEA Trigger: GGCCTCAAACTCAGAGATCTGCCTACCTTTCTCCCATGTGCTGGGATAACAAGTGTGTACCCTACATCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR TCA 72 bp | ACACACAGACCTCAACCTCAGCCTGGCAGAGGCATCTaGGAACTAGGAAATCTTCTCCAACACCCAGAAAGT | + |
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Preference number: 3 (lower is better) Translates to: THRPQPQPGRGI*ELGNLLQHPES Trigger: ACTTTCTGGGTGTTGGAGAAGATTTCCTAGTTCTCAGATGCCTCTGCCAGGCTGAGGTTGAGGTCTGTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR CCA 72 bp | ACTAAGGAAGTCTGCTGGGATTGCTGGGAAGTCTGCTaGTGGGTTTTGTTTTCTATTGGTGGTGGGTGCTGT | + |
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Preference number: 3 (lower is better) Translates to: TKEVCWDCWEVC*WVLFSIGGGCC Trigger: ACAGCACCCACCACCAATAGAAAACAAAACCCACCAGCAGACTTCCCAGCAATCCCAGCAGACTTCCTTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR TCA 72 bp | GAGCTTTCTTGCACTGTTTTCTCAGAGGACACAGTCTaGATTCAGTTCCCAGTCCCTGTGTCAGGCAACTCA | + |
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Preference number: 3 (lower is better) Translates to: ELSCTVFSEDTV*IQFPVPVSGNS Trigger: TGAGTTGCCTGACACAGGGACTGGGAACTGAATTCAGACTGTGTCCTCTGAGAAAACAGTGCAAGAAAGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR CCA 72 bp | AAGTGGTCAGTTGTGTATTCCACTAAGGAAGTCTGCTaGGATTGCTGGGAAGTCTGCTGGTGGGTTTTGTTT | + |
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Preference number: 3 (lower is better) Translates to: KWSVVYSTKEVC*DCWEVCWWVLF Trigger: AAACAAAACCCACCAGCAGACTTCCCAGCAATCCCAGCAGACTTCCTTAGTGGAATACACAACTGACCACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR-3UTR CAA 90 bp | GCTGAGAAAGAGGCTCAGTGTAAAGAGCTTTCTTGCACTGTTTTCTCAGAGGACGTGCTGTTCCTGGGTTaGTTTTTGCTGTTTTTGAGG | + |
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Preference number: 3 (lower is better) Translates to: AEKEAQCKELSCTVFSEDVLFLG*FLLFLR Trigger: CCTCAAAAACAGCAAAAACAAACCCAGGAACAGCAC...GTCCTCTGAGAAAACAGTGCAAGAAAGCTCTTTACACTGAGCCTCTTTCTCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR CCA 72 bp | GTTGTGTATTCCACTAAGGAAGTCTGCTGGGATTGCTaGGAAGTCTGCTGGTGGGTTTTGTTTTCTATTGGT | + |
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Preference number: 3 (lower is better) Translates to: VVYSTKEVCWDC*EVCWWVLFSIG Trigger: ACCAATAGAAAACAAAACCCACCAGCAGACTTCCCAGCAATCCCAGCAGACTTCCTTAGTGGAATACACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR TCA 72 bp | CCTGTCTTTTCCCCATACACTCAGGAAAGTATTGACTaGAAGTGGTCAGTTGTGTATTCCACTAAGGAAGTC | + |
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Preference number: 3 (lower is better) Translates to: PVFSPYTQESID*KWSVVYSTKEV Trigger: GACTTCCTTAGTGGAATACACAACTGACCACTTTCAGTCAATACTTTCCTGAGTGTATGGGGAAAAGACAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS-3UTR TCA 90 bp | CTCCCACCAGGGACCTGCAGGCCAAAGCAGGTTATTGGAAGACTGGAGCTTGGGGGTGGTAGCGGTCACTaGGCCAGCCCAGTCCATAGG | + |
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Preference number: 4 (lower is better) Translates to: LPPGTCRPKQVIGRLELGGGSGH*ASPVHR Trigger: CCTATGGACTGGGCTGGCTCAGTGACCGCTACCACC...CCCAAGCTCCAGTCTTCCAATAACCTGCTTTGGCCTGCAGGTCCCTGGTGGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS-3UTR GCA 90 bp | CTCAGAGGACACAGTCTGAATTCAGTTCCCAGTCCCTGTGTCAGGCAACTCAGAAGCCAGAGAGCCGGCTaGTCCACGGACAGGTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: LRGHSLNSVPSPCVRQLRSQRAG*STDRCP Trigger: GGGGCACCTGTCCGTGGAGCAGCCGGCTCTCTGGCT...TCTGAGTTGCCTGACACAGGGACTGGGAACTGAATTCAGACTGTGTCCTCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS-3UTR CCA 90 bp | TGTCAGGCAACTCAGAACACTGTAACTCTAGCTCCAGGGGATCCCAGAACCTCTAGGGAGCCGGCCACCTaGGTTGAGGCCACCACAGGC | + |
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Preference number: 4 (lower is better) Translates to: CQATQNTVTLAPGDPRTSREPAT*VEATTG Trigger: GCCTGTGGTGGCCTCAACCCAGGTGGCCGGCTCCCT...AGAGGTTCTGGGATCCCCTGGAGCTAGAGTTACAGTGTTCTGAGTTGCCTGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS-3UTR TCA 90 bp | CTCAGAGGACACAGTCTGAATTCAGTTCCCAGTCCCTGTGTCAGGCAACTCAGAGCCGGCCACCTGGGTTaGGGCCACCACAGGCTCAAT | + |
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Preference number: 4 (lower is better) Translates to: LRGHSLNSVPSPCVRQLRAGHLG*GHHRLN Trigger: ATTGAGCCTGTGGTGGCCTCAACCCAGGTGGCCGGC...TCTGAGTTGCCTGACACAGGGACTGGGAACTGAATTCAGACTGTGTCCTCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS-3UTR TCA 90 bp | AATGAGAAAAGGGGGCTGGCTGGCTGGAGCCCGAAGCCCTCCAGGATCCAGAACGAGTTTGGACATGGCTaGCCTGATGGTTGTGATCGG | + |
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Preference number: 4 (lower is better) Translates to: NEKRGLAGWSPKPSRIQNEFGHG*PDGCDR Trigger: CCGATCACAACCATCAGGTCAGCCATGTCCAAACTC...GTTCTGGATCCTGGAGGGCTTCGGGCTCCAGCCAGCCAGCCCCCTTTTCTCATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR CAA 72 bp | CCCTCCCACCAGGGACCTGCAGGCCAAAGCAGGTTATaGGAAGACTGGAGCTTGGGTTTCACAGGCAGAACC | + |
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Preference number: 4 (lower is better) Translates to: PSHQGPAGQSRL*EDWSLGFTGRT Trigger: GGTTCTGCCTGTGAAACCCAAGCTCCAGTCTTCCAATAACCTGCTTTGGCCTGCAGGTCCCTGGTGGGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR CAA 72 bp | CCTGCAGGCCAAAGCAGGTTATTGGAAGACTGGAGCTaGGGTTTCACAGGCAGAACCTGGTTATGGCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: PAGQSRLLEDWS*GFTGRTWLWLA Trigger: CGCCAGCCATAACCAGGTTCTGCCTGTGAAACCCAAGCTCCAGTCTTCCAATAACCTGCTTTGGCCTGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS-3UTR TCA 90 bp | AGGGCTGAGAAAGAGGCTCAGTGTAAAGAGCTTTCTTGCACTGTTTTCTCAGAGGGGATCCCAGCGCCATaGCCCCGGACCAATAAGCGG | + |
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Preference number: 4 (lower is better) Translates to: RAEKEAQCKELSCTVFSEGIPAP*PRTNKR Trigger: CCGCTTATTGGTCCGGGGTCATGGCGCTGGGATCCC...CTCTGAGAAAACAGTGCAAGAAAGCTCTTTACACTGAGCCTCTTTCTCAGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS-3UTR TCA 90 bp | GCCAGTCTTCTCAGCATATTGAGTTCCAGGTCAACCAAGGCTACATCCCCTGTCGCACAAAAAGGGCCATaGCGTCTACTGTGCCCACAG | + |
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Preference number: 4 (lower is better) Translates to: ASLLSILSSRSTKATSPVAQKGP*RLLCPQ Trigger: CTGTGGGCACAGTAGACGTCATGGCCCTTTTTGTGC...GACAGGGGATGTAGCCTTGGTTGACCTGGAACTCAATATGCTGAGAAGACTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS-3UTR GCA 90 bp | GTCCCTGTGTCAGGCAACTCAGAACACTGTAACTCTAGCTCCAGGGGATCCCAGGAGTGCCCAACGATTTaGTTGAAGAGATGCCCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: VPVSGNSEHCNSSSRGSQECPTI*LKRCPE Trigger: TTCGGGGCATCTCTTCAAGCAAATCGTTGGGCACTC...CTGGGATCCCCTGGAGCTAGAGTTACAGTGTTCTGAGTTGCCTGACACAGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| 3UTR CAA 72 bp | GTCTGCTGGGATTGCTGGGAAGTCTGCTGGTGGGTTTaGTTTTCTATTGGTGGTGGGTGCTGTTCCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VCWDCWEVCWWV*FSIGGGCCSWV Trigger: AACCCAGGAACAGCACCCACCACCAATAGAAAACAAAACCCACCAGCAGACTTCCCAGCAATCCCAGCAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS-3UTR GCA 90 bp | GGTTTGTTTTTGCTGTTTTTGAGGCAGGATTCTGTGTATTCCTGGCTGGTCTCAGATGCCCCGAAGCCATaGTCCCAGAGAACCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLFLLFLRQDSVYSWLVSDAPKP*SQRTQP Trigger: TGGCTGGGTTCTCTGGGAGCATGGCTTCGGGGCATC...TGAGACCAGCCAGGAATACACAGAATCCTGCCTCAAAAACAGCAAAAACAAACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS-3UTR GCA 90 bp | TGTCAGGCAACTCAGAACACTGTAACTCTAGCTCCAGGGGATCCCAGAACCTCTATTTGCTTGAAGAGATaGCCCGAAGCCATGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: CQATQNTVTLAPGDPRTSICLKR*PEAMLP Trigger: TGGGAGCATGGCTTCGGGGCATCTCTTCAAGCAAAT...AGAGGTTCTGGGATCCCCTGGAGCTAGAGTTACAGTGTTCTGAGTTGCCTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS-3UTR CCA 90 bp | GCCAGTCTTCTCAGCATATTGAGTTCCAGGTCAACCAAGGCTACATCCCCTGTCGTACATCACCTCCACTaGCCAGTCCAGCATCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: ASLLSILSSRSTKATSPVVHHLH*PVQHHF Trigger: AAAGTGATGCTGGACTGGCCAGTGGAGGTGATGTAC...GACAGGGGATGTAGCCTTGGTTGACCTGGAACTCAATATGCTGAGAAGACTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS-3UTR TCA 90 bp | GCCAGTCTTCTCAGCATATTGAGTTCCAGGTCAACCAAGGCTACATCCCCTGTCAGGAAGAGTCCTTTATaGGTTTGGACATGGCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: ASLLSILSSRSTKATSPVRKSPL*VWTWLT Trigger: GGTCAGCCATGTCCAAACTCATAAAGGACTCTTCCT...GACAGGGGATGTAGCCTTGGTTGACCTGGAACTCAATATGCTGAGAAGACTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS-3UTR TCA 90 bp | GAGAAAGAGGCTCAGTGTAAAGAGCTTTCTTGCACTGTTTTCTCAGAGGACACACAGCCAGGTCATAGATaGTGGCACCCACAAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EKEAQCKELSCTVFSEDTQPGHR*WHPQTA Trigger: TGCTGTTTGTGGGTGCCATCATCTATGACCTGGCTG...TGTGTCCTCTGAGAAAACAGTGCAAGAAAGCTCTTTACACTGAGCCTCTTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS-3UTR GCA 90 bp | GAGAAAGAGGCTCAGTGTAAAGAGCTTTCTTGCACTGTTTTCTCAGAGGACACAGTATCTACAGTGGGGTaGACCTTGTTGGGCTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: EKEAQCKELSCTVFSEDTVSTVG*TLLGLD Trigger: GTCCAAGCCCAACAAGGTGCACCCCACTGTAGATAC...TGTGTCCTCTGAGAAAACAGTGCAAGAAAGCTCTTTACACTGAGCCTCTTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS-3UTR CCA 90 bp | CTTGCACTGTTTTCTCAGAGGACACAGTCTGAATTCAGTTCCCAGTCCCTGTGTGCAACAACTTCCCTTTaGGAAGACTTCCCTTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LALFSQRTQSEFSSQSLCATTSL*EDFPFP Trigger: TGGGAAAGGGAAGTCTTCCCAAAGGGAAGTTGTTGC...ACACAGGGACTGGGAACTGAATTCAGACTGTGTCCTCTGAGAAAACAGTGCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS-3UTR CCA 90 bp | AGGGCTGAGAAAGAGGCTCAGTGTAAAGAGCTTTCTTGCACTGTTTTCTCAGAGGGCCACAACACCAATTaGGACAATGGCCAAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RAEKEAQCKELSCTVFSEGHNTN*DNGQEG Trigger: TCCTTCTTGGCCATTGTCCCAATTGGTGTTGTGGCC...CTCTGAGAAAACAGTGCAAGAAAGCTCTTTACACTGAGCCTCTTTCTCAGCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS-3UTR TCA 90 bp | CTTGCACTGTTTTCTCAGAGGACACAGTCTGAATTCAGTTCCCAGTCCCTGTGTTTCTGTTTGTCTTGTTaGTCTGGATCCAGGGTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LALFSQRTQSEFSSQSLCFCLSC*SGSRVR Trigger: TCGAACCCTGGATCCAGATCAACAAGACAAACAGAA...ACACAGGGACTGGGAACTGAATTCAGACTGTGTCCTCTGAGAAAACAGTGCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS-3UTR TCA 90 bp | AAAAGCAACAAAGGCAGCAGATATCACCTTGACTTCCAGCTGAGGAATGCTCAGACACTCTCCTTGTTGTaGCCTCGGGACTTGTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: KSNKGSRYHLDFQLRNAQTLSLL*PRDLFV Trigger: TACAAACAAGTCCCGAGGTCACAACAAGGAGAGTGT...CTGAGCATTCCTCAGCTGGAAGTCAAGGTGATATCTGCTGCCTTTGTTGCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS-3UTR CCA 90 bp | AGGGCTGAGAAAGAGGCTCAGTGTAAAGAGCTTTCTTGCACTGTTTTCTCAGAGTGCACTTGGTTCCAATaGAGAGGCTCCTTAAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RAEKEAQCKELSCTVFSECTWFQ*RGSLST Trigger: TGTGCTTAAGGAGCCTCTCCATTGGAACCAAGTGCA...CTCTGAGAAAACAGTGCAAGAAAGCTCTTTACACTGAGCCTCTTTCTCAGCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS-3UTR CCA 90 bp | CTTGCACTGTTTTCTCAGAGGACACAGTCTGAATTCAGTTCCCAGTCCCTGTGTAGATCTTGTTATATATaGTGGATGTCACCACCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LALFSQRTQSEFSSQSLCRSCYI*WMSPPQ Trigger: CTGGGGTGGTGACATCCACCATATATAACAAGATCT...ACACAGGGACTGGGAACTGAATTCAGACTGTGTCCTCTGAGAAAACAGTGCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS-3UTR CCA 90 bp | GCTGAGAAAGAGGCTCAGTGTAAAGAGCTTTCTTGCACTGTTTTCTCAGAGGACTCTTGTTATATATGGTaGATGTCACCACCCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AEKEAQCKELSCTVFSEDSCYIW*MSPPQS Trigger: TGACTGGGGTGGTGACATCCACCATATATAACAAGA...GTCCTCTGAGAAAACAGTGCAAGAAAGCTCTTTACACTGAGCCTCTTTCTCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS GCA 90 bp | GCAAACGCCGCACAGCCAACGCTGCAGGCAGTTAACAGGAGGCCTTaGGCAGAGTGCCCAACGATTTGCTTGAAGAGATGCCCCGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ANAAQPTLQAVNRRP*AECPTICLKRCPEA Trigger: GGCTTCGGGGCATCTCTTCAAGCAAATCGTTGGGCACTCTGCGCAAGGCCTCCTGTTAACTGCCTGCAGCGTTGGCTGTGCGGCGTTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS TCA 90 bp | CTGCTGCTCCGTACATCACCTCCACTGGCCAGTCCAGCATCACTTTaGGTAAGAGTCCGATGCGGGACAGCAGGAAGCCCAGCATCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLLRTSPPLASPASL*VRVRCGTAGSPASL Trigger: CAGCGATGCTGGGCTTCCTGCTGTCCCGCATCGGACTCTTACTCAAAGTGATGCTGGACTGGCCAGTGGAGGTGATGTACGGAGCAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS GCA 90 bp | AACAGGAGGCCTTGCGCAGAGTGCCCAACGATTTGCTTGAAGAGATaGCCCGAAGCCATGCTCCCAGAGAACCCAGCCAAGCCCAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: NRRPCAECPTICLKR*PEAMLPENPAKPRT Trigger: AGTCCTGGGCTTGGCTGGGTTCTCTGGGAGCATGGCTTCGGGGCATCTCTTCAAGCAAATCGTTGGGCACTCTGCGCAAGGCCTCCTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
||
| CDS GCA 90 bp | CTGCAGGCAGTTAACAGGAGGCCTTGCGCAGAGTGCCCAACGATTTaGTTGAAGAGATGCCCCGAAGCCATGCTCCCAGAGAACCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LQAVNRRPCAECPTI*LKRCPEAMLPENPA Trigger: GGCTGGGTTCTCTGGGAGCATGGCTTCGGGGCATCTCTTCAAGCAAATCGTTGGGCACTCTGCGCAAGGCCTCCTGTTAACTGCCTGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS GCA 90 bp | GCACAGCCAACGCTGCAGGCAGTTAACAGGAGGCCTTGCGCAGAGTaGCCAACGATTTGCTTGAAGAGATGCCCCGAAGCCATGCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: AQPTLQAVNRRPCAE*PTICLKRCPEAMLP Trigger: TGGGAGCATGGCTTCGGGGCATCTCTTCAAGCAAATCGTTGGGCACTCTGCGCAAGGCCTCCTGTTAACTGCCTGCAGCGTTGGCTGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS TCA 90 bp | AGGCAGTTAACAGGAGGCCTTGCGCAGAGTGCCCAACGATTTGCTTaGAGAGATGCCCCGAAGCCATGCTCCCAGAGAACCCAGCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: RQLTGGLAQSAQRFA*RDAPKPCSQRTQPS Trigger: GCTTGGCTGGGTTCTCTGGGAGCATGGCTTCGGGGCATCTCTTCAAGCAAATCGTTGGGCACTCTGCGCAAGGCCTCCTGTTAACTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS-3UTR CAA 90 bp | CTCCCACCAGGGACCTGCAGGCCAAAGCAGGTTATTGGAAGACTGGAGCTTGGGTGCCCAACGATTTGCTaGAAGAGATGCCCCGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LPPGTCRPKQVIGRLELGCPTIC*KRCPEA Trigger: GGCTTCGGGGCATCTCTTCAAGCAAATCGTTGGGCA...CCCAAGCTCCAGTCTTCCAATAACCTGCTTTGGCCTGCAGGTCCCTGGTGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS GCA 90 bp | GCACAAAGAGGCTGTAGAAAAGGGCAAACGCCGCACAGCCAACGCTaGAGGCAGTTAACAGGAGGCCTTGCGCAGAGTGCCCAACGATTT | + |
|
Preference number: 5 (lower is better) Translates to: AQRGCRKGQTPHSQR*RQLTGGLAQSAQRF Trigger: AAATCGTTGGGCACTCTGCGCAAGGCCTCCTGTTAACTGCCTGCAGCGTTGGCTGTGCGGCGTTTGCCCTTTTCTACAGCCTCTTTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS-3UTR CAA 90 bp | CCAAAGCAGGTTATTGGAAGACTGGAGCTTGGGTTTCACAGGCAGAACCTGGTTAGCCGGCCACCTGGGTaGAGGCCACCACAGGCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: PKQVIGRLELGFHRQNLVSRPPG*RPPQAQ Trigger: TTGAGCCTGTGGTGGCCTCAACCCAGGTGGCCGGCT...AACCAGGTTCTGCCTGTGAAACCCAAGCTCCAGTCTTCCAATAACCTGCTTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS TCA 90 bp | AGGCCAAGAGAAGGGCTCCGGACCCAAAGGAAAGCATCCCGATTATaGTCATCGTGGTGTCCCGGAAGCAGCGGGAGAAAACCAAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: RPREGLRTQRKASRL*SSWCPGSSGRKPRH Trigger: GTGTCTTGGTTTTCTCCCGCTGCTTCCGGGACACCACGATGATCATAATCGGGATGCTTTCCTTTGGGTCCGGAGCCCTTCTCTTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS CCA 90 bp | CCAGGGTTCGATAGGTGCCCATCATGCCAGACACAGTATCTACAGTaGGGTGCACCTTGTTGGGCTTGGACTCAGGGACCTTCAGCACAA | + |
|
Preference number: 5 (lower is better) Translates to: PGFDRCPSCQTQYLQ*GAPCWAWTQGPSAQ Trigger: TTGTGCTGAAGGTCCCTGAGTCCAAGCCCAACAAGGTGCACCCCACTGTAGATACTGTGTCTGGCATGATGGGCACCTATCGAACCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS-3UTR CAA 90 bp | CTAGCTCCAGGGGATCCCAGAACCTCTGGGCCTTCTCATCCACACTCAATCACAAGAGTGCCCAACGATTaGCTTGAAGAGATGCCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: LAPGDPRTSGPSHPHSITRVPND*LEEMPR Trigger: TCGGGGCATCTCTTCAAGCAAATCGTTGGGCACTCT...TGTGATTGAGTGTGGATGAGAAGGCCCAGAGGTTCTGGGATCCCCTGGAGCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS-3UTR CAA 90 bp | TATTCCACTAAGGAAGTCTGCTGGGATTGCTGGGAAGTCTGCTGGTGGGTTTTGTGCACCTTGTTGGGCTaGGACTCAGGGACCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: YSTKEVCWDCWEVCWWVLCTLLG*DSGTFS Trigger: GCTGAAGGTCCCTGAGTCCAAGCCCAACAAGGTGCA...CAAAACCCACCAGCAGACTTCCCAGCAATCCCAGCAGACTTCCTTAGTGGAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS TCA 90 bp | CCCGGAAGCAGCGGGAGAAAACCAAGACACCCAAGAAGCTGGTTATaGAGATTATGTACCCAGAAGCCATCCCATAGCCCAGCTGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: PGSSGRKPRHPRSWL*RLCTQKPSHSPAAL Trigger: AAGTGCAGCTGGGCTATGGGATGGCTTCTGGGTACATAATCTTCATAACCAGCTTCTTGGGTGTCTTGGTTTTCTCCCGCTGCTTCCGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS CCA 90 bp | TGCCCATCATGCCAGACACAGTATCTACAGTGGGGTGCACCTTGTTaGGCTTGGACTCAGGGACCTTCAGCACAAAGAGGCTGTAGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: CPSCQTQYLQWGAPC*AWTQGPSAQRGCRK Trigger: TTTTCTACAGCCTCTTTGTGCTGAAGGTCCCTGAGTCCAAGCCCAACAAGGTGCACCCCACTGTAGATACTGTGTCTGGCATGATGGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS-3UTR CAA 90 bp | CTTGCACTGTTTTCTCAGAGGACACAGTCTGAATTCAGTTCCCAGTCCCTGTGTAGCAACAACTTCCCTTaGGGAAGACTTCCCTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LALFSQRTQSEFSSQSLCSNNFP*GRLPFP Trigger: GGGAAAGGGAAGTCTTCCCAAAGGGAAGTTGTTGCT...ACACAGGGACTGGGAACTGAATTCAGACTGTGTCCTCTGAGAAAACAGTGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS-3UTR CAA 90 bp | CCAAAGCAGGTTATTGGAAGACTGGAGCTTGGGTTTCACAGGCAGAACCTGGTTGAGTCCTTTATGAGTTaGGACATGGCTGACCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: PKQVIGRLELGFHRQNLVESFMS*DMADLM Trigger: CATCAGGTCAGCCATGTCCAAACTCATAAAGGACTC...AACCAGGTTCTGCCTGTGAAACCCAAGCTCCAGTCTTCCAATAACCTGCTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS-3UTR CAA 90 bp | AAGAGCTTTCTTGCACTGTTTTCTCAGAGGACACAGTCTGAATTCAGTTCCCAGGATAGCCTTCTGCTGTaGGTCTTCCTGATACTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: KSFLALFSQRTQSEFSSQDSLLL*VFLILH Trigger: GTGGAGTATCAGGAAGACCAACAGCAGAAGGCTATC...CTGGGAACTGAATTCAGACTGTGTCCTCTGAGAAAACAGTGCAAGAAAGCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS TCA 90 bp | GAAAATCTTTCCATAGGAAGAGTCCTTTATGAGTTTGGACATGGCTaGCCTGATGGTTGTGATCGGAATAAGCGCAAACAGCATGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: ENLSIGRVLYEFGHG*PDGCDRNKRKQHDG Trigger: GCCATCATGCTGTTTGCGCTTATTCCGATCACAACCATCAGGTCAGCCATGTCCAAACTCATAAAGGACTCTTCCTATGGAAAGATTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS CAA 72 bp | GTAGTCCTGCGTCGTAGAGGGAGCCGGCCACCTGGGTaGAGGCCACCACAGGCTCAATCCAAGTCCTCACCC | + |
|
Preference number: 6 (lower is better) Translates to: VVLRRRGSRPPG*RPPQAQSKSSP Trigger: GGGTGAGGACTTGGATTGAGCCTGTGGTGGCCTCAACCCAGGTGGCCGGCTCCCTCTACGACGCAGGACTAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS CAA 90 bp | CTACCAGGAGTAGTCCTGCGTCGTAGAGGGAGCCGGCCACCTGGGTaGAGGCCACCACAGGCTCAATCCAAGTCCTCACCCGGAAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LPGVVLRRRGSRPPG*RPPQAQSKSSPGSQ Trigger: CTGGCTTCCGGGTGAGGACTTGGATTGAGCCTGTGGTGGCCTCAACCCAGGTGGCCGGCTCCCTCTACGACGCAGGACTACTCCTGGTAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS CAA 90 bp | GCTGCTGCTCCGTACATCACCTCCACTGGCCAGTCCAGCATCACTTaGAGTAAGAGTCCGATGCGGGACAGCAGGAAGCCCAGCATCGCT | + |
|
Preference number: 6 (lower is better) Translates to: AAAPYITSTGQSSIT*SKSPMRDSRKPSIA Trigger: AGCGATGCTGGGCTTCCTGCTGTCCCGCATCGGACTCTTACTCAAAGTGATGCTGGACTGGCCAGTGGAGGTGATGTACGGAGCAGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS TCA 72 bp | ACAGGAGGCCTTGCGCAGAGTGCCCAACGATTTGCTTaGAGAGATGCCCCGAAGCCATGCTCCCAGAGAACC | + |
|
Preference number: 6 (lower is better) Translates to: TGGLAQSAQRFA*RDAPKPCSQRT Trigger: GGTTCTCTGGGAGCATGGCTTCGGGGCATCTCTTCAAGCAAATCGTTGGGCACTCTGCGCAAGGCCTCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS GCA 72 bp | CCTTGCGCAGAGTGCCCAACGATTTGCTTGAAGAGATaGCCCGAAGCCATGCTCCCAGAGAACCCAGCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: PCAECPTICLKR*PEAMLPENPAK Trigger: CTTGGCTGGGTTCTCTGGGAGCATGGCTTCGGGGCATCTCTTCAAGCAAATCGTTGGGCACTCTGCGCAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS GCA 72 bp | ACGCTGCAGGCAGTTAACAGGAGGCCTTGCGCAGAGTaGCCAACGATTTGCTTGAAGAGATGCCCCGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: TLQAVNRRPCAE*PTICLKRCPEA Trigger: GGCTTCGGGGCATCTCTTCAAGCAAATCGTTGGGCACTCTGCGCAAGGCCTCCTGTTAACTGCCTGCAGCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
||
| CDS CAA 72 bp | CCGTACATCACCTCCACTGGCCAGTCCAGCATCACTTaGAGTAAGAGTCCGATGCGGGACAGCAGGAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: PYITSTGQSSIT*SKSPMRDSRKP Trigger: GGGCTTCCTGCTGTCCCGCATCGGACTCTTACTCAAAGTGATGCTGGACTGGCCAGTGGAGGTGATGTACGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
||
| CDS TCA 72 bp | CGTACATCACCTCCACTGGCCAGTCCAGCATCACTTTaGGTAAGAGTCCGATGCGGGACAGCAGGAAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RTSPPLASPASL*VRVRCGTAGSP Trigger: TGGGCTTCCTGCTGTCCCGCATCGGACTCTTACTCAAAGTGATGCTGGACTGGCCAGTGGAGGTGATGTACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS GCA 72 bp | GTTAACAGGAGGCCTTGCGCAGAGTGCCCAACGATTTaGTTGAAGAGATGCCCCGAAGCCATGCTCCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: VNRRPCAECPTI*LKRCPEAMLPE Trigger: CTCTGGGAGCATGGCTTCGGGGCATCTCTTCAAGCAAATCGTTGGGCACTCTGCGCAAGGCCTCCTGTTAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
||
| CDS GCA 72 bp | GCACAGCCAACGCTGCAGGCAGTTAACAGGAGGCCTTaGGCAGAGTGCCCAACGATTTGCTTGAAGAGATGC | + |
|
Preference number: 6 (lower is better) Translates to: AQPTLQAVNRRP*AECPTICLKRC Trigger: GCATCTCTTCAAGCAAATCGTTGGGCACTCTGCGCAAGGCCTCCTGTTAACTGCCTGCAGCGTTGGCTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
||
| CDS GCA 72 bp | GTGCCCATCATGCCAGACACAGTATCTACAGTGGGGTaGACCTTGTTGGGCTTGGACTCAGGGACCTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VPIMPDTVSTVG*TLLGLDSGTFS Trigger: GCTGAAGGTCCCTGAGTCCAAGCCCAACAAGGTGCACCCCACTGTAGATACTGTGTCTGGCATGATGGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
||
| CDS TCA 72 bp | GAAGGGCTCCGGACCCAAAGGAAAGCATCCCGATTATaGTCATCGTGGTGTCCCGGAAGCAGCGGGAGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: EGLRTQRKASRL*SSWCPGSSGRK Trigger: TTTTCTCCCGCTGCTTCCGGGACACCACGATGATCATAATCGGGATGCTTTCCTTTGGGTCCGGAGCCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
||
| CDS CCA 72 bp | TGCCAGACACAGTATCTACAGTGGGGTGCACCTTGTTaGGCTTGGACTCAGGGACCTTCAGCACAAAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: CQTQYLQWGAPC*AWTQGPSAQRG Trigger: GCCTCTTTGTGCTGAAGGTCCCTGAGTCCAAGCCCAACAAGGTGCACCCCACTGTAGATACTGTGTCTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS CAA 72 bp | ATGCCAGACACAGTATCTACAGTGGGGTGCACCTTGTaGGGCTTGGACTCAGGGACCTTCAGCACAAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: MPDTVSTVGCTL*GLDSGTFSTKR Trigger: CCTCTTTGTGCTGAAGGTCCCTGAGTCCAAGCCCAACAAGGTGCACCCCACTGTAGATACTGTGTCTGGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS CAA 72 bp | ATCATGCCAGACACAGTATCTACAGTGGGGTGCACCTaGTTGGGCTTGGACTCAGGGACCTTCAGCACAAAG | + |
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Preference number: 6 (lower is better) Translates to: IMPDTVSTVGCT*LGLDSGTFSTK Trigger: CTTTGTGCTGAAGGTCCCTGAGTCCAAGCCCAACAAGGTGCACCCCACTGTAGATACTGTGTCTGGCATGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS CAA 72 bp | AGGAGTCCGAGGGTTCCTTGGTACATTCTGTTTGTCTaGTTGATCTGGATCCAGGGTTCGATAGGTGCCCAT | + |
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Preference number: 6 (lower is better) Translates to: RSPRVPWYILFV*LIWIQGSIGAH Trigger: ATGGGCACCTATCGAACCCTGGATCCAGATCAACAAGACAAACAGAATGTACCAAGGAACCCTCGGACTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS CAA 72 bp | GGGAAGACTTCCCTTTCCCAGGAGTCCGAGGGTTCCTaGGTACATTCTGTTTGTCTTGTTGATCTGGATCCA | + |
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Preference number: 6 (lower is better) Translates to: GKTSLSQESEGS*VHSVCLVDLDP Trigger: TGGATCCAGATCAACAAGACAAACAGAATGTACCAAGGAACCCTCGGACTCCTGGGAAAGGGAAGTCTTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS CAA 72 bp | TATGTACCCAGAAGCCATCCCATAGCCCAGCTGCACTaGGTTCCAATGGAGAGGCTCCTTAAGCACAAAAAG | + |
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Preference number: 6 (lower is better) Translates to: YVPRSHPIAQLH*VPMERLLKHKK Trigger: CTTTTTGTGCTTAAGGAGCCTCTCCATTGGAACCAAGTGCAGCTGGGCTATGGGATGGCTTCTGGGTACATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS CAA 90 bp | TATGAAGATTATGTACCCAGAAGCCATCCCATAGCCCAGCTGCACTaGGTTCCAATGGAGAGGCTCCTTAAGCACAAAAAGGGCCATGAC | + |
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Preference number: 6 (lower is better) Translates to: YEDYVPRSHPIAQLH*VPMERLLKHKKGHD Trigger: GTCATGGCCCTTTTTGTGCTTAAGGAGCCTCTCCATTGGAACCAAGTGCAGCTGGGCTATGGGATGGCTTCTGGGTACATAATCTTCATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS CAA 72 bp | AGTCCGAGGGTTCCTTGGTACATTCTGTTTGTCTTGTaGATCTGGATCCAGGGTTCGATAGGTGCCCATCAT | + |
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Preference number: 6 (lower is better) Translates to: SPRVPWYILFVL*IWIQGSIGAHH Trigger: ATGATGGGCACCTATCGAACCCTGGATCCAGATCAACAAGACAAACAGAATGTACCAAGGAACCCTCGGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS CAA 72 bp | GTGACCTCGGGACTTGTTTGTAGGCCACAACACCAATaGGGACAATGGCCAAGAAGGAGAGAAAAGATGATA | + |
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Preference number: 6 (lower is better) Translates to: VTSGLVCRPQHQ*GQWPRRREKMI Trigger: TATCATCTTTTCTCTCCTTCTTGGCCATTGTCCCAATTGGTGTTGTGGCCTACAAACAAGTCCCGAGGTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS CAA 90 bp | CACGAGGTTGTAAATGATGTTGAAATTGGAGATAGCCTTCTGCTGTaGGTCTTCCTGATACTCCACCAGCGACTGGTTGGCACTGTAATT | + |
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Preference number: 6 (lower is better) Translates to: HEVVNDVEIGDSLLL*VFLILHQRLVGTVI Trigger: AATTACAGTGCCAACCAGTCGCTGGTGGAGTATCAGGAAGACCAACAGCAGAAGGCTATCTCCAATTTCAACATCATTTACAACCTCGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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| CDS TCA 72 bp | TCCATAGGAAGAGTCCTTTATGAGTTTGGACATGGCTaGCCTGATGGTTGTGATCGGAATAAGCGCAAACAG | + |
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Preference number: 6 (lower is better) Translates to: SIGRVLYEFGHG*PDGCDRNKRKQ Trigger: CTGTTTGCGCTTATTCCGATCACAACCATCAGGTCAGCCATGTCCAAACTCATAAAGGACTCTTCCTATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030081.2 |
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