Pregenerated sensors for SLC46A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020829Ensembl transcript IDs: ENSMUST00000001126.4, ENSMUST00000146431.3
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGTGGGTCCATTGCTCCTCATGGCTTCGGGCAGATCAGGGGCTCTaGGGAAACTGCTGGAACTCCGGGTGTGGATTAACCTTTTCCAGT | + |
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Preference number: 1 (lower is better) Translates to: VWVHCSSWLRADQGL*GNCWNSGCGLTFSS Trigger: ACTGGAAAAGGTTAATCCACACCCGGAGTTCCAGCAGTTTCCTCAGAGCCCCTGATCTGCCCGAAGCCATGAGGAGCAATGGACCCACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146431.3 |
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| 3UTR CCA 90 bp | CTTCATCGCCTGGAAGCCACTGAACACAGCAGAGACCTAGTACCATaGGCTAGAAGGAGAGGTCGGTCTCACGCTTGGTCCCTGAAATGC | + |
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Preference number: 1 (lower is better) Translates to: LHRLEATEHSRDLVP*ARRRGRSHAWSLKC Trigger: GCATTTCAGGGACCAAGCGTGAGACCGACCTCTCCTTCTAGCCCATGGTACTAGGTCTCTGCTGTGTTCAGTGGCTTCCAGGCGATGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| 3UTR CCA 90 bp | TGGATAGACTGTGGTCAAGGACGGATTCCGAGGTGGCTGGTGTGCTaGGCTTTAGGCATACATCGTCAGTGTGGGTCCATTGCTCCTCAT | + |
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Preference number: 1 (lower is better) Translates to: WIDCGQGRIPRWLVC*ALGIHRQCGSIAPH Trigger: ATGAGGAGCAATGGACCCACACTGACGATGTATGCCTAAAGCCCAGCACACCAGCCACCTCGGAATCCGTCCTTGACCACAGTCTATCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001126.4 ENSMUST00000146431.3 |
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| 3UTR TCA 90 bp | TGCCACAAATGGCTCCTTGCAGCCTGCCCTAAAGTGGACCTCTCCTaGTTAGATTCTGTATCTAGCAGAGATTGGCTCAGTCAGAGAGTA | + |
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Preference number: 1 (lower is better) Translates to: CHKWLLAACPKVDLS*LDSVSSRDWLSQRV Trigger: TACTCTCTGACTGAGCCAATCTCTGCTAGATACAGAATCTAATCAGGAGAGGTCCACTTTAGGGCAGGCTGCAAGGAGCCATTTGTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| 3UTR TCA 90 bp | CTTTTCAGACTGATTCAAACAATTTACTGTGACAATTGCCAAGGCTaGGGTCAAGGGTGGGTAGACTGTGGTCAAGGACGGCTTCCCAAC | + |
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Preference number: 1 (lower is better) Translates to: LFRLIQTIYCDNCQG*GQGWVDCGQGRLPN Trigger: GTTGGGAAGCCGTCCTTGACCACAGTCTACCCACCCTTGACCTCAGCCTTGGCAATTGTCACAGTAAATTGTTTGAATCAGTCTGAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| 3UTR-3UTR TCA 90 bp | AGTGTGGGTCCATTGCTCCTCATGGCTTCGGGCAGATCAGGGGCTCTGAGGAAAAGGGGAAGCCCTTCATaGAGTTCAGAGTGGCCGGGT | + |
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Preference number: 2 (lower is better) Translates to: SVGPLLLMASGRSGALRKRGSPS*SSEWPG Trigger: ACCCGGCCACTCTGAACTTCATGAAGGGCTTCCCCT...TTTCCTCAGAGCCCCTGATCTGCCCGAAGCCATGAGGAGCAATGGACCCACACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000146431.3 |
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| 3UTR-3UTR CCA 90 bp | AGGCTGAGGTCAAGGGTGGATAGACTGTGGTCAAGGACGGATTCCGAGGTGGCTGGACGGATTCCGAGGTaGCTGGTGTGCTGGGCTTTA | + |
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Preference number: 2 (lower is better) Translates to: RLRSRVDRLWSRTDSEVAGRIPR*LVCWAL Trigger: TAAAGCCCAGCACACCAGCCACCTCGGAATCCGTCC...AGCCACCTCGGAATCCGTCCTTGACCACAGTCTATCCACCCTTGACCTCAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001126.4 ENSMUST00000146431.3 |
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| 3UTR-3UTR TCA 90 bp | ATAGACTGTGGTCAAGGACGGATTCCGAGGTGGCTGGTGTGCTGGGCTTTAGGCACTCCCTTTCCAGAGTaGGTACTGCCAAGGCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: IDCGQGRIPRWLVCWALGTPFPE*VLPRLR Trigger: CCTCAGCCTTGGCAGTACTCACTCTGGAAAGGGAGT...GCCTAAAGCCCAGCACACCAGCCACCTCGGAATCCGTCCTTGACCACAGTCTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001126.4 ENSMUST00000146431.3 |
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| 3UTR-3UTR CCA 90 bp | GGGTGGATAGACTGTGGTCAAGGACGGATTCCGAGGTGGCTGGTGTGCTGGGCTCATACATCGTCAGTGTaGGTCCATTGCTCCTCATGG | + |
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Preference number: 2 (lower is better) Translates to: GWIDCGQGRIPRWLVCWAHTSSV*VHCSSW Trigger: CCATGAGGAGCAATGGACCCACACTGACGATGTATG...AGCCCAGCACACCAGCCACCTCGGAATCCGTCCTTGACCACAGTCTATCCACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001126.4 ENSMUST00000146431.3 |
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| 3UTR-3UTR CCA 90 bp | TGGATAGACTGTGGTCAAGGACGGATTCCGAGGTGGCTGGTGTGCTGGGCTTTAGGACGGATTCCGAGGTaGCTGGTGTGCTGGGCTTTA | + |
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Preference number: 2 (lower is better) Translates to: WIDCGQGRIPRWLVCWALGRIPR*LVCWAL Trigger: TAAAGCCCAGCACACCAGCCACCTCGGAATCCGTCC...TAAAGCCCAGCACACCAGCCACCTCGGAATCCGTCCTTGACCACAGTCTATCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001126.4 ENSMUST00000146431.3 |
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| 3UTR-3UTR CCA 90 bp | CAATTGCCAAGGCTGAGGTCAAGGGTGGGTAGACTGTGGTCAAGGACGGCTTCCAACCCTTGCCACAAATaGCTCCTTGCAGCCTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: QLPRLRSRVGRLWSRTASNPCHK*LLAACP Trigger: AGGGCAGGCTGCAAGGAGCCATTTGTGGCAAGGGTT...GGAAGCCGTCCTTGACCACAGTCTACCCACCCTTGACCTCAGCCTTGGCAATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| 3UTR-3UTR TCA 90 bp | GCCACTGAACACAGCAGAGACCTAGTACCATGGGCTAGAAGGAGAGGTCGGTCTACTCCCTTTCCAGAGTaGGTACTGCCAAGGCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: ATEHSRDLVPWARRRGRSTPFPE*VLPRLR Trigger: CCTCAGCCTTGGCAGTACTCACTCTGGAAAGGGAGT...AGACCGACCTCTCCTTCTAGCCCATGGTACTAGGTCTCTGCTGTGTTCAGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| 3UTR-3UTR CCA 90 bp | GTTCAGAGTGGCCGGGTAGATGGAGTTGAAGATGCCGGAGGCCATCAACATGGCCATACATCGTCAGTGTaGGTCCATTGCTCCTCATGG | + |
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Preference number: 2 (lower is better) Translates to: VQSGRVDGVEDAGGHQHGHTSSV*VHCSSW Trigger: CCATGAGGAGCAATGGACCCACACTGACGATGTATG...GCCATGTTGATGGCCTCCGGCATCTTCAACTCCATCTACCCGGCCACTCTGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146431.3 |
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| 3UTR-3UTR CCA 90 bp | CAATTGCCAAGGCTGAGGTCAAGGGTGGGTAGACTGTGGTCAAGGACGGCTTCCGGTGTTGCTCATAACTaGCTTGAACTCCCTTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: QLPRLRSRVGRLWSRTASGVAHN*LELPFQ Trigger: CTGGAAAGGGAGTTCAAGCCAGTTATGAGCAACACC...GGAAGCCGTCCTTGACCACAGTCTACCCACCCTTGACCTCAGCCTTGGCAATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| 3UTR-3UTR CCA 90 bp | ACGGATTCCGAGGTGGCTGGTGTGCTGGGCTTTAGGCATACATCGTCAGTGTGGGTATCTAGCAGAGATTaGCTCAGTCAGAGAGTAGGT | + |
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Preference number: 2 (lower is better) Translates to: TDSEVAGVLGFRHTSSVWVSSRD*LSQRVG Trigger: ACCTACTCTCTGACTGAGCCAATCTCTGCTAGATAC...CCACACTGACGATGTATGCCTAAAGCCCAGCACACCAGCCACCTCGGAATCCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| 3UTR-3UTR CAA 90 bp | GGGTGGATAGACTGTGGTCAAGGACGGATTCCGAGGTGGCTGGTGTGCTGGGCTGTCAGTGTGGGTCCATaGCTCCTCATGGCTTCGGGC | + |
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Preference number: 3 (lower is better) Translates to: GWIDCGQGRIPRWLVCWAVSVGP*LLMASG Trigger: GCCCGAAGCCATGAGGAGCAATGGACCCACACTGAC...AGCCCAGCACACCAGCCACCTCGGAATCCGTCCTTGACCACAGTCTATCCACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001126.4 ENSMUST00000146431.3 |
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| 3UTR-3UTR CAA 90 bp | GGGGAAGCCCTTCATGAAGTTCAGAGTGGCCGGGTAGATGGAGTTGAAGATGCCGTCAGTGTGGGTCCATaGCTCCTCATGGCTTCGGGC | + |
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Preference number: 3 (lower is better) Translates to: GEALHEVQSGRVDGVEDAVSVGP*LLMASG Trigger: GCCCGAAGCCATGAGGAGCAATGGACCCACACTGAC...GGCATCTTCAACTCCATCTACCCGGCCACTCTGAACTTCATGAAGGGCTTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146431.3 |
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| 3UTR-3UTR CAA 90 bp | CAATTGCCAAGGCTGAGGTCAAGGGTGGGTAGACTGTGGTCAAGGACGGCTTCCGCCACAAATGGCTCCTaGCAGCCTGCCCTAAAGTGG | + |
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Preference number: 3 (lower is better) Translates to: QLPRLRSRVGRLWSRTASATNGS*QPALKW Trigger: CCACTTTAGGGCAGGCTGCAAGGAGCCATTTGTGGC...GGAAGCCGTCCTTGACCACAGTCTACCCACCCTTGACCTCAGCCTTGGCAATTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| 3UTR GCA 72 bp | GACTGTGGTCAAGGACGGATTCCGAGGTGGCTGGTGTaGTGGGCTTTAGGCATACATCGTCAGTGTGGGTCC | + |
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Preference number: 3 (lower is better) Translates to: DCGQGRIPRWLV*WALGIHRQCGS Trigger: GGACCCACACTGACGATGTATGCCTAAAGCCCAGCACACCAGCCACCTCGGAATCCGTCCTTGACCACAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001126.4 ENSMUST00000146431.3 |
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| 3UTR CCA 72 bp | GTACTGCCAAGGCTGAGGTCAAGGGTGGATAGACTGTaGTCAAGGACGGATTCCGAGGTGGCTGGTGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: VLPRLRSRVDRL*SRTDSEVAGVL Trigger: CAGCACACCAGCCACCTCGGAATCCGTCCTTGACCACAGTCTATCCACCCTTGACCTCAGCCTTGGCAGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001126.4 ENSMUST00000146431.3 |
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| 3UTR TCA 72 bp | CATTGCTCCTCATGGCTTCGGGCAGATCAGGGGCTCTaGGGAAACTGCTGGAACTCCGGGTGTGGATTAACC | + |
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Preference number: 3 (lower is better) Translates to: HCSSWLRADQGL*GNCWNSGCGLT Trigger: GGTTAATCCACACCCGGAGTTCCAGCAGTTTCCTCAGAGCCCCTGATCTGCCCGAAGCCATGAGGAGCAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146431.3 |
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| 3UTR CCA 72 bp | GGGTGGATAGACTGTGGTCAAGGACGGATTCCGAGGTaGCTGGTGTGCTGGGCTTTAGGCATACATCGTCAG | + |
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Preference number: 3 (lower is better) Translates to: GWIDCGQGRIPR*LVCWALGIHRQ Trigger: CTGACGATGTATGCCTAAAGCCCAGCACACCAGCCACCTCGGAATCCGTCCTTGACCACAGTCTATCCACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001126.4 ENSMUST00000146431.3 |
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| 3UTR CCA 72 bp | CTGGAAGCCACTGAACACAGCAGAGACCTAGTACCATaGGCTAGAAGGAGAGGTCGGTCTCACGCTTGGTCC | + |
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Preference number: 3 (lower is better) Translates to: LEATEHSRDLVP*ARRRGRSHAWS Trigger: GGACCAAGCGTGAGACCGACCTCTCCTTCTAGCCCATGGTACTAGGTCTCTGCTGTGTTCAGTGGCTTCCAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| 3UTR CCA 72 bp | TGTGGTCAAGGACGGATTCCGAGGTGGCTGGTGTGCTaGGCTTTAGGCATACATCGTCAGTGTGGGTCCATT | + |
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Preference number: 3 (lower is better) Translates to: CGQGRIPRWLVC*ALGIHRQCGSI Trigger: AATGGACCCACACTGACGATGTATGCCTAAAGCCCAGCACACCAGCCACCTCGGAATCCGTCCTTGACCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001126.4 ENSMUST00000146431.3 |
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| 3UTR TCA 72 bp | CTTGAACTCCCTTTCCAGAGTGAGTACTGCCAAGGCTaGGGTCAAGGGTGGATAGACTGTGGTCAAGGACGG | + |
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Preference number: 3 (lower is better) Translates to: LELPFQSEYCQG*GQGWIDCGQGR Trigger: CCGTCCTTGACCACAGTCTATCCACCCTTGACCTCAGCCTTGGCAGTACTCACTCTGGAAAGGGAGTTCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001126.4 ENSMUST00000146431.3 |
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| 3UTR TCA 72 bp | GGGCTAGAAGGAGAGGTCGGTCTCACGCTTGGTCCCTaGAATGCCATCTCCTTCACTCTAGAAGGTTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: GLEGEVGLTLGP*NAISFTLEGSE Trigger: CTCAGAACCTTCTAGAGTGAAGGAGATGGCATTTCAGGGACCAAGCGTGAGACCGACCTCTCCTTCTAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| 3UTR CCA 72 bp | GTACCATGGGCTAGAAGGAGAGGTCGGTCTCACGCTTaGTCCCTGAAATGCCATCTCCTTCACTCTAGAAGG | + |
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Preference number: 3 (lower is better) Translates to: VPWARRRGRSHA*SLKCHLLHSRR Trigger: CCTTCTAGAGTGAAGGAGATGGCATTTCAGGGACCAAGCGTGAGACCGACCTCTCCTTCTAGCCCATGGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| 3UTR TCA 72 bp | TGGCTCCTTGCAGCCTGCCCTAAAGTGGACCTCTCCTaGTTAGATTCTGTATCTAGCAGAGATTGGCTCAGT | + |
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Preference number: 3 (lower is better) Translates to: WLLAACPKVDLS*LDSVSSRDWLS Trigger: ACTGAGCCAATCTCTGCTAGATACAGAATCTAATCAGGAGAGGTCCACTTTAGGGCAGGCTGCAAGGAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| 3UTR CCA 72 bp | GATTGGCTCAGTCAGAGAGTAGGTGTTGCTCATAACTaGCTTGAACTCCCTTTCCAGAGTGAGTACTGCCAA | + |
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Preference number: 3 (lower is better) Translates to: DWLSQRVGVAHN*LELPFQSEYCQ Trigger: TTGGCAGTACTCACTCTGGAAAGGGAGTTCAAGCCAGTTATGAGCAACACCTACTCTCTGACTGAGCCAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001126.4 ENSMUST00000146431.3 |
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| CDS-3UTR TCA 90 bp | TGTGGTCAAGGACGGATTCCGAGGTGGCTGGTGTGCTGGGCTTTAGGCATACATTGGGCCCGGAGCCAGTaGCCCCCGAGAAGGCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: CGQGRIPRWLVCWALGIHWARSQ*PPRRLA Trigger: GGCAAGCCTTCTCGGGGGTCACTGGCTCCGGGCCCA...ATGTATGCCTAAAGCCCAGCACACCAGCCACCTCGGAATCCGTCCTTGACCACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS-3UTR TCA 90 bp | ATAGACTGTGGTCAAGGACGGATTCCGAGGTGGCTGGTGTGCTGGGCTTTAGGCGGCCCAGCAGGCTGGTaGGGTAGGGTAGGTGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: IDCGQGRIPRWLVCWALGGPAGW*GRVGAG Trigger: CCCAGCACCTACCCTACCTCACCAGCCTGCTGGGCC...GCCTAAAGCCCAGCACACCAGCCACCTCGGAATCCGTCCTTGACCACAGTCTAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS-3UTR TCA 90 bp | GGGTGGATAGACTGTGGTCAAGGACGGATTCCGAGGTGGCTGGTGTGCTGGGCTCCGGGTAGATGGAGTTaGAGATGCCGGAGGCCATCA | + |
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Preference number: 4 (lower is better) Translates to: GWIDCGQGRIPRWLVCWAPGRWS*RCRRPS Trigger: TGATGGCCTCCGGCATCTTCAACTCCATCTACCCGG...AGCCCAGCACACCAGCCACCTCGGAATCCGTCCTTGACCACAGTCTATCCACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS-3UTR CCA 90 bp | ACGGATTCCGAGGTGGCTGGTGTGCTGGGCTTTAGGCATACATCGTCAGTGTGGCCAGCCAGAAGGGGTTaGCATAACCCTGGGCCCGGA | + |
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Preference number: 4 (lower is better) Translates to: TDSEVAGVLGFRHTSSVWPARRG*HNPGPG Trigger: TCCGGGCCCAGGGTTATGCCAACCCCTTCTGGCTGG...CCACACTGACGATGTATGCCTAAAGCCCAGCACACCAGCCACCTCGGAATCCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS-3UTR CCA 90 bp | ATAGACTGTGGTCAAGGACGGATTCCGAGGTGGCTGGTGTGCTGGGCTTTAGGCAGGCTCCCAGCAGGGTaGACCAGAAGAGTCCCACCA | + |
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Preference number: 4 (lower is better) Translates to: IDCGQGRIPRWLVCWALGRLPAG*TRRVPP Trigger: TGGTGGGACTCTTCTGGTCCACCCTGCTGGGAGCCT...GCCTAAAGCCCAGCACACCAGCCACCTCGGAATCCGTCCTTGACCACAGTCTAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS-3UTR TCA 90 bp | ACGGATTCCGAGGTGGCTGGTGTGCTGGGCTTTAGGCATACATCGTCAGTGTGGAGGGGAAGCCCTTCATaGAGTTCAGAGTGGCCGGGT | + |
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Preference number: 4 (lower is better) Translates to: TDSEVAGVLGFRHTSSVWRGSPS*SSEWPG Trigger: ACCCGGCCACTCTGAACTTCATGAAGGGCTTCCCCT...CCACACTGACGATGTATGCCTAAAGCCCAGCACACCAGCCACCTCGGAATCCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS-3UTR GCA 90 bp | ATAGACTGTGGTCAAGGACGGATTCCGAGGTGGCTGGTGTGCTGGGCTTTAGGCGTGGTGAGCGGTCCCTaGAGAACCAGGGCAAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: IDCGQGRIPRWLVCWALGVVSGP*RTRAKL Trigger: CAACTTTGCCCTGGTTCTGCAGGGACCGCTCACCAC...GCCTAAAGCCCAGCACACCAGCCACCTCGGAATCCGTCCTTGACCACAGTCTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001126.4 ENSMUST00000146431.3 |
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| CDS-3UTR GCA 90 bp | GACTGTGGTCAAGGACGGATTCCGAGGTGGCTGGTGTGCTGGGCTTTAGGCATAGTGGTGAGCGGTCCCTaGAGAACCAGGGCAAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: DCGQGRIPRWLVCWALGIVVSGP*RTRAKL Trigger: CAACTTTGCCCTGGTTCTGCAGGGACCGCTCACCAC...TATGCCTAAAGCCCAGCACACCAGCCACCTCGGAATCCGTCCTTGACCACAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001126.4 ENSMUST00000146431.3 |
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| CDS-3UTR GCA 90 bp | CTGCCAAGGCTGAGGTCAAGGGTGGATAGACTGTGGTCAAGGACGGATTCCGAGTCCCGGCCACACCAATaGATGCTTCCAGCAGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: LPRLRSRVDRLWSRTDSESRPHQ*MLPAEP Trigger: TGGCTCTGCTGGAAGCATGCATTGGTGTGGCCGGGA...CTCGGAATCCGTCCTTGACCACAGTCTATCCACCCTTGACCTCAGCCTTGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS-3UTR CCA 90 bp | GGTCAAGGGTGGATAGACTGTGGTCAAGGACGGATTCCGAGGTGGCTGGTGTGCGAACCAGGGCAAAGTTaGCCAGGAAGACTAGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: GQGWIDCGQGRIPRWLVCEPGQS*PGRLGA Trigger: AGCCCCTAGTCTTCCTGGCCAACTTTGCCCTGGTTC...GCACACCAGCCACCTCGGAATCCGTCCTTGACCACAGTCTATCCACCCTTGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001126.4 ENSMUST00000146431.3 |
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| CDS-3UTR CCA 90 bp | AGGCTGAGGTCAAGGGTGGATAGACTGTGGTCAAGGACGGATTCCGAGGTGGCTGCTGCACCACAAAGATaGACACCACGGCCTGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: RLRSRVDRLWSRTDSEVAAAPQR*TPRPGA Trigger: TGCTCCAGGCCGTGGTGTCCATCTTTGTGGTGCAGC...AGCCACCTCGGAATCCGTCCTTGACCACAGTCTATCCACCCTTGACCTCAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS-3UTR GCA 90 bp | CAAGGACGGCTTCCCAACCATAGACAGAGCTTCATCGCCTGGAAGCCACTGAACGGCCACACCAATGCATaGTTCCAGCAGAGCCATCCG | + |
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Preference number: 4 (lower is better) Translates to: QGRLPNHRQSFIAWKPLNGHTNA*FQQSHP Trigger: CGGATGGCTCTGCTGGAAGCATGCATTGGTGTGGCC...GTTCAGTGGCTTCCAGGCGATGAAGCTCTGTCTATGGTTGGGAAGCCGTCCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS-3UTR CCA 90 bp | CTGAGGTCAAGGGTGGATAGACTGTGGTCAAGGACGGATTCCGAGGTGGCTGGTGAACCAGGGCAAAGTTaGCCAGGAAGACTAGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: LRSRVDRLWSRTDSEVAGEPGQS*PGRLGA Trigger: AGCCCCTAGTCTTCCTGGCCAACTTTGCCCTGGTTC...ACCAGCCACCTCGGAATCCGTCCTTGACCACAGTCTATCCACCCTTGACCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001126.4 ENSMUST00000146431.3 |
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| CDS-3UTR GCA 90 bp | GAAGAAACCCTTGCCACAAATGGCTCCTTGCAGCCTGCCCTAAAGTGGACCTCTGTCCCAGCAGAGGGGTaGGCTCAGCTCATAGAGTGT | + |
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Preference number: 4 (lower is better) Translates to: EETLATNGSLQPALKWTSVPAEG*AQLIEC Trigger: ACACTCTATGAGCTGAGCGCACCCCTCTGCTGGGAC...AGAGGTCCACTTTAGGGCAGGCTGCAAGGAGCCATTTGTGGCAAGGGTTTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS-3UTR GCA 90 bp | TGTGGTCAAGGACGGATTCCGAGGTGGCTGGTGTGCTGGGCTTTAGGCATACATTCAGCCAGGCAGAATTaGAGAAGCCTTAGGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: CGQGRIPRWLVCWALGIHSARQN*RSLRPS Trigger: GCTGGGCCTAAGGCTTCTGCAATTCTGCCTGGCTGA...ATGTATGCCTAAAGCCCAGCACACCAGCCACCTCGGAATCCGTCCTTGACCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS-3UTR CCA 90 bp | TGGATAGACTGTGGTCAAGGACGGATTCCGAGGTGGCTGGTGTGCTGGGCTTTACATAGCCAATCAGCTTaGAGTCCCAGCAGAGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: WIDCGQGRIPRWLVCWALHSQSA*SPSRGV Trigger: CACCCCTCTGCTGGGACTCCAAGCTGATTGGCTATG...TAAAGCCCAGCACACCAGCCACCTCGGAATCCGTCCTTGACCACAGTCTATCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS-3UTR TCA 90 bp | GAACACAGCAGAGACCTAGTACCATGGGCTAGAAGGAGAGGTCGGTCTCACGCTCTGCGTATAGAGCCATaGCAATCAGCAGGGCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: EHSRDLVPWARRRGRSHALRIEP*QSAGPK Trigger: CTTTGGCCCTGCTGATTGTCATGGCTCTATACGCAG...AGCGTGAGACCGACCTCTCCTTCTAGCCCATGGTACTAGGTCTCTGCTGTGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS-3UTR GCA 90 bp | GAACACAGCAGAGACCTAGTACCATGGGCTAGAAGGAGAGGTCGGTCTCACGCTACGAAGAACCCGACGTaGAGTTCTAGCTGCACCACA | + |
|
Preference number: 4 (lower is better) Translates to: EHSRDLVPWARRRGRSHATKNPT*SSSCTT Trigger: TGTGGTGCAGCTAGAACTGCACGTCGGGTTCTTCGT...AGCGTGAGACCGACCTCTCCTTCTAGCCCATGGTACTAGGTCTCTGCTGTGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS-3UTR CCA 90 bp | TGTGGTCAAGGACGGATTCCGAGGTGGCTGGTGTGCTGGGCTTTAGGCATACATGGGCTAGATGCATCCTaGACTTTTCTGGGGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CGQGRIPRWLVCWALGIHGLDAS*TFLGLE Trigger: TTCCAGCCCCAGAAAAGTCCAGGATGCATCTAGCCC...ATGTATGCCTAAAGCCCAGCACACCAGCCACCTCGGAATCCGTCCTTGACCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS-3UTR CCA 90 bp | TGTGGTCAAGGACGGATTCCGAGGTGGCTGGTGTGCTGGGCTTTAGGCATACATCCCAATCAGAATGGCTaGAATGAAGAGGAGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CGQGRIPRWLVCWALGIHPNQNG*NEEEAS Trigger: GCTGGCCTCCTCTTCATTCCAGCCATTCTGATTGGG...ATGTATGCCTAAAGCCCAGCACACCAGCCACCTCGGAATCCGTCCTTGACCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS-3UTR GCA 90 bp | GATAGACTGTGGTCAAGGACGGATTCCGAGGTGGCTGGTGTGCTGGGCTTTAGGGTTAGAGCTAACATCTaGCACAGAGGCAAAGCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: DRLWSRTDSEVAGVLGFRVRANI*HRGKAS Trigger: GCTAGCTTTGCCTCTGTGGCAGATGTTAGCTCTAAC...CCTAAAGCCCAGCACACCAGCCACCTCGGAATCCGTCCTTGACCACAGTCTATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS-3UTR TCA 90 bp | TGTGGTCAAGGACGGATTCCGAGGTGGCTGGTGTGCTGGGCTTTAGGCATACATAGTGTCAGGATATCTTaGGCCCCAAAATGCACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: CGQGRIPRWLVCWALGIHSVRIS*APKCTV Trigger: TACTGTGCATTTTGGGGCTCAAGATATCCTGACACT...ATGTATGCCTAAAGCCCAGCACACCAGCCACCTCGGAATCCGTCCTTGACCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS CCA 90 bp | GCAATGGGCGGCGACCCACGCGGTCACTCCAGGCTCCCAGCAGGGTaGACCAGAAGAGTCCCACCAGGAAGCCTCCCACGTTCATGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: AMGGDPRGHSRLPAG*TRRVPPGSLPRSCR Trigger: TCTACATGAACGTGGGAGGCTTCCTGGTGGGACTCTTCTGGTCCACCCTGCTGGGAGCCTGGAGTGACCGCGTGGGTCGCCGCCCATTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS GCA 90 bp | GTGACCCCCGAGAAGGCTTGCCAGGGTCCCGGCCACACCAATGCATaGTTCCAGCAGAGCCATCCGGAAGGTGCGACTGTGGTTAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VTPEKACQGPGHTNA*FQQSHPEGATVVRA Trigger: AGCTCTAACCACAGTCGCACCTTCCGGATGGCTCTGCTGGAAGCATGCATTGGTGTGGCCGGGACCCTGGCAAGCCTTCTCGGGGGTCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS CCA 90 bp | CCGACGTGCAGTTCTAGCTGCACCACAAAGATGGACACCACGGCCTaGAGCAGCAGACCAAGAGAGGCCAGCACCAGCAATGGGCGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: PTCSSSCTTKMDTTA*SSRPREASTSNGRR Trigger: TCGCCGCCCATTGCTGGTGCTGGCCTCTCTTGGTCTGCTGCTCCAGGCCGTGGTGTCCATCTTTGTGGTGCAGCTAGAACTGCACGTCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS GCA 90 bp | TCCGTGCTGAACCGGTGCCAAAGGTACTGTGTGGTGAGCGGTCCCTaGAGAACCAGGGCAAAGTTGGCCAGGAAGACTAGGGGCTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: SVLNRCQRYCVVSGP*RTRAKLARKTRGST Trigger: CGTGGAGCCCCTAGTCTTCCTGGCCAACTTTGCCCTGGTTCTGCAGGGACCGCTCACCACACAGTACCTTTGGCACCGGTTCAGCACGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001126.4 ENSMUST00000146431.3 |
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| CDS TCA 90 bp | ACAGGCGTCGTGACCAATGACAGGAAGAGCAATCCGTACCCTTCATaGGGGGATCCGCGCTTTGGTTCCCACAGTTCTCCCGGTGGCGGG | + |
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Preference number: 5 (lower is better) Translates to: TGVVTNDRKSNPYPS*GDPRFGSHSSPGGG Trigger: CCCGCCACCGGGAGAACTGTGGGAACCAAAGCGCGGATCCCCTCATGAAGGGTACGGATTGCTCTTCCTGTCATTGGTCACGACGCCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146431.3 |
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| CDS GCA 90 bp | CCCAGAAGGGCACAAAGAGCTCGGCCAAGCACGAAGAACCCGACGTaGAGTTCTAGCTGCACCACAAAGATGGACACCACGGCCTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PRRAQRARPSTKNPT*SSSCTTKMDTTAWS Trigger: GCTCCAGGCCGTGGTGTCCATCTTTGTGGTGCAGCTAGAACTGCACGTCGGGTTCTTCGTGCTTGGCCGAGCTCTTTGTGCCCTTCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS TCA 90 bp | TCATGTAGAGGGTCCAGTGAGATGTCAGGGTCTCCACTTCCTTCATaGGGGGATCCGCGCTTTGGTTCCCACAGTTCTCCCGGTGGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SCRGSSEMSGSPLPS*GDPRFGSHSSPGGG Trigger: CCCGCCACCGGGAGAACTGTGGGAACCAAAGCGCGGATCCCCTCATGAAGGAAGTGGAGACCCTGACATCTCACTGGACCCTCTACATGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS TCA 90 bp | TGTCAGCCAGGCAGAATTGCAGAAGCCTTAGGCCCAGCAGGCTGGTaGGGTAGGGTAGGTGCTGGGCTGCTGAGCCATAGCCAATCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: CQPGRIAEALGPAGW*GRVGAGLLSHSQSA Trigger: AGCTGATTGGCTATGGCTCAGCAGCCCAGCACCTACCCTACCTCACCAGCCTGCTGGGCCTAAGGCTTCTGCAATTCTGCCTGGCTGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS CCA 90 bp | CAAGCACGAAGAACCCGACGTGCAGTTCTAGCTGCACCACAAAGATaGACACCACGGCCTGGAGCAGCAGACCAAGAGAGGCCAGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: QARRTRRAVLAAPQR*TPRPGAADQERPAP Trigger: TGGTGCTGGCCTCTCTTGGTCTGCTGCTCCAGGCCGTGGTGTCCATCTTTGTGGTGCAGCTAGAACTGCACGTCGGGTTCTTCGTGCTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS-3UTR CAA 90 bp | AGGACGGATTCCGAGGTGGCTGGTGTGCTGGGCTTTAGGCATACATCGTCAGTGGACTCGCTCACCAGCTaGGAAAGCTTGGCCCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: RTDSEVAGVLGFRHTSSVDSLTS*ESLARM Trigger: CATCCGGGCCAAGCTTTCCAAGCTGGTGAGCGAGTC...CACTGACGATGTATGCCTAAAGCCCAGCACACCAGCCACCTCGGAATCCGTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS TCA 90 bp | CACCAGCTTGGAAAGCTTGGCCCGGATGACAGGCGTCGTGACCAATaGCAGGAAGAGCAATCCGTACCCTTCATGAGGGGATCCGCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: HQLGKLGPDDRRRDQ*QEEQSVPFMRGSAL Trigger: AAGCGCGGATCCCCTCATGAAGGGTACGGATTGCTCTTCCTGTCATTGGTCACGACGCCTGTCATCCGGGCCAAGCTTTCCAAGCTGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146431.3 |
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| CDS GCA 90 bp | CAAAGAGCTCGGCCAAGCACGAAGAACCCGACGTGCAGTTCTAGCTaGACCACAAAGATGGACACCACGGCCTGGAGCAGCAGACCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: QRARPSTKNPTCSSS*TTKMDTTAWSSRPR Trigger: TCTTGGTCTGCTGCTCCAGGCCGTGGTGTCCATCTTTGTGGTGCAGCTAGAACTGCACGTCGGGTTCTTCGTGCTTGGCCGAGCTCTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS-3UTR CAA 90 bp | CTGCCAAGGCTGAGGTCAAGGGTGGATAGACTGTGGTCAAGGACGGATTCCGAGAGAACCAGGGCAAAGTaGGCCAGGAAGACTAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LPRLRSRVDRLWSRTDSERTRAK*ARKTRG Trigger: GCCCCTAGTCTTCCTGGCCAACTTTGCCCTGGTTCT...CTCGGAATCCGTCCTTGACCACAGTCTATCCACCCTTGACCTCAGCCTTGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001126.4 ENSMUST00000146431.3 |
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| CDS-3UTR CAA 90 bp | CAAGGACGGCTTCCCAACCATAGACAGAGCTTCATCGCCTGGAAGCCACTGAACACCAGCTTGGAAAGCTaGGCCCGGATGACAGGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: QGRLPNHRQSFIAWKPLNTSLES*ARMTGV Trigger: GACGCCTGTCATCCGGGCCAAGCTTTCCAAGCTGGT...GTTCAGTGGCTTCCAGGCGATGAAGCTCTGTCTATGGTTGGGAAGCCGTCCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS GCA 90 bp | CAGCAGAGCCATCCGGAAGGTGCGACTGTGGTTAGAGCTAACATCTaGCACAGAGGCAAAGCTAGCAGCAAGGAGGCCGTTGAAGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QQSHPEGATVVRANI*HRGKASSKEAVEVS Trigger: GGAGACTTCAACGGCCTCCTTGCTGCTAGCTTTGCCTCTGTGGCAGATGTTAGCTCTAACCACAGTCGCACCTTCCGGATGGCTCTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS-3UTR CAA 90 bp | GAAGAAACCCTTGCCACAAATGGCTCCTTGCAGCCTGCCCTAAAGTGGACCTCTAGAACCAGGGCAAAGTaGGCCAGGAAGACTAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: EETLATNGSLQPALKWTSRTRAK*ARKTRG Trigger: GCCCCTAGTCTTCCTGGCCAACTTTGCCCTGGTTCT...AGAGGTCCACTTTAGGGCAGGCTGCAAGGAGCCATTTGTGGCAAGGGTTTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS TCA 90 bp | CTGGAACCACATATAGCCGGGCAATGGATCGATGATGGCGGAGCGTaGAAAGCCTGGTGGACTTTGGCTCCTTCACCGTCTCACCAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LEPHIAGQWIDDGGA*KAWWTLAPSPSHQN Trigger: GTTTTGGTGAGACGGTGAAGGAGCCAAAGTCCACCAGGCTTTTCACGCTCCGCCATCATCGATCCATTGCCCGGCTATATGTGGTTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS TCA 90 bp | CACCAGCTTGGAAAGCTTGGCCCGGATGACAGGCGTCGTGACCAATaGCAGGAAGAGCAATCCGTACCCTGTGAACATGAGGGGTGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: HQLGKLGPDDRRRDQ*QEEQSVPCEHEGCN Trigger: ATTACACCCCTCATGTTCACAGGGTACGGATTGCTCTTCCTGTCATTGGTCACGACGCCTGTCATCCGGGCCAAGCTTTCCAAGCTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS-3UTR CAA 90 bp | CTGCCAAGGCTGAGGTCAAGGGTGGATAGACTGTGGTCAAGGACGGATTCCGAGGAGTGTCAGGATATCTaGAGCCCCAAAATGCACAGT | + |
|
Preference number: 5 (lower is better) Translates to: LPRLRSRVDRLWSRTDSEECQDI*SPKMHS Trigger: ACTGTGCATTTTGGGGCTCAAGATATCCTGACACTC...CTCGGAATCCGTCCTTGACCACAGTCTATCCACCCTTGACCTCAGCCTTGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS-3UTR CAA 90 bp | TGGATAGACTGTGGTCAAGGACGGATTCCGAGGTGGCTGGTGTGCTGGGCTTTAACCATTCCCAGGATGTaGAAAGCCAGGCCAATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: WIDCGQGRIPRWLVCWALTIPRM*KARPIS Trigger: TGAGATTGGCCTGGCTTTCAACATCCTGGGAATGGT...TAAAGCCCAGCACACCAGCCACCTCGGAATCCGTCCTTGACCACAGTCTATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS CAA 72 bp | TGTGTGGTGAGCGGTCCCTGCAGAACCAGGGCAAAGTaGGCCAGGAAGACTAGGGGCTCCACGGGGCCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: CVVSGPCRTRAK*ARKTRGSTGPR Trigger: CCGCGGCCCCGTGGAGCCCCTAGTCTTCCTGGCCAACTTTGCCCTGGTTCTGCAGGGACCGCTCACCACACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001126.4 ENSMUST00000146431.3 |
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| CDS CAA 72 bp | AACCCTGGGCCCGGAGCCAGTGACCCCCGAGAAGGCTaGCCAGGGTCCCGGCCACACCAATGCATGCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: NPGPGASDPREG*PGSRPHQCMLP Trigger: TGGAAGCATGCATTGGTGTGGCCGGGACCCTGGCAAGCCTTCTCGGGGGTCACTGGCTCCGGGCCCAGGGTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS GCA 72 bp | CCCCGAGAAGGCTTGCCAGGGTCCCGGCCACACCAATaGATGCTTCCAGCAGAGCCATCCGGAAGGTGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: PREGLPGSRPHQ*MLPAEPSGRCD Trigger: GTCGCACCTTCCGGATGGCTCTGCTGGAAGCATGCATTGGTGTGGCCGGGACCCTGGCAAGCCTTCTCGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS GCA 72 bp | GAGAAGGCTTGCCAGGGTCCCGGCCACACCAATGCATaGTTCCAGCAGAGCCATCCGGAAGGTGCGACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: EKACQGPGHTNA*FQQSHPEGATV Trigger: CACAGTCGCACCTTCCGGATGGCTCTGCTGGAAGCATGCATTGGTGTGGCCGGGACCCTGGCAAGCCTTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS CAA 72 bp | GCACCCTGCTCCGACTCGCTCACCAGCTTGGAAAGCTaGGCCCGGATGACAGGCGTCGTGACCAATGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: APCSDSLTSLES*ARMTGVVTNDR Trigger: CCTGTCATTGGTCACGACGCCTGTCATCCGGGCCAAGCTTTCCAAGCTGGTGAGCGAGTCGGAGCAGGGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS CAA 72 bp | GAGAACAGAGCACCCTGCTCCGACTCGCTCACCAGCTaGGAAAGCTTGGCCCGGATGACAGGCGTCGTGACC | + |
|
Preference number: 6 (lower is better) Translates to: ENRAPCSDSLTS*ESLARMTGVVT Trigger: GGTCACGACGCCTGTCATCCGGGCCAAGCTTTCCAAGCTGGTGAGCGAGTCGGAGCAGGGTGCTCTGTTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS CAA 90 bp | GCCACAGCAGAGAACAGAGCACCCTGCTCCGACTCGCTCACCAGCTaGGAAAGCTTGGCCCGGATGACAGGCGTCGTGACCAATGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: ATAENRAPCSDSLTS*ESLARMTGVVTNDR Trigger: CCTGTCATTGGTCACGACGCCTGTCATCCGGGCCAAGCTTTCCAAGCTGGTGAGCGAGTCGGAGCAGGGTGCTCTGTTCTCTGCTGTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS TCA 72 bp | GGCAGAATTGCAGAAGCCTTAGGCCCAGCAGGCTGGTaGGGTAGGGTAGGTGCTGGGCTGCTGAGCCATAGC | + |
|
Preference number: 6 (lower is better) Translates to: GRIAEALGPAGW*GRVGAGLLSHS Trigger: GCTATGGCTCAGCAGCCCAGCACCTACCCTACCTCACCAGCCTGCTGGGCCTAAGGCTTCTGCAATTCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS GCA 72 bp | CGGCCAAGCACGAAGAACCCGACGTGCAGTTCTAGCTaGACCACAAAGATGGACACCACGGCCTGGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RPSTKNPTCSSS*TTKMDTTAWSS Trigger: GCTGCTCCAGGCCGTGGTGTCCATCTTTGTGGTGCAGCTAGAACTGCACGTCGGGTTCTTCGTGCTTGGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS CCA 72 bp | AGGGTCTCCACTTCCTTCATGAGGGGATCCGCGCTTTaGTTCCCACAGTTCTCCCGGTGGCGGGTGCCATTG | + |
|
Preference number: 6 (lower is better) Translates to: RVSTSFMRGSAL*FPQFSRWRVPL Trigger: CAATGGCACCCGCCACCGGGAGAACTGTGGGAACCAAAGCGCGGATCCCCTCATGAAGGAAGTGGAGACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS CCA 72 bp | GAGCAATCCGTACCCTTCATGAGGGGATCCGCGCTTTaGTTCCCACAGTTCTCCCGGTGGCGGGTGCCATTG | + |
|
Preference number: 6 (lower is better) Translates to: EQSVPFMRGSAL*FPQFSRWRVPL Trigger: CAATGGCACCCGCCACCGGGAGAACTGTGGGAACCAAAGCGCGGATCCCCTCATGAAGGGTACGGATTGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146431.3 |
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| CDS CAA 72 bp | CAGGGTCTCCACTTCCTTCATGAGGGGATCCGCGCTTaGGTTCCCACAGTTCTCCCGGTGGCGGGTGCCATT | + |
|
Preference number: 6 (lower is better) Translates to: QGLHFLHEGIRA*VPTVLPVAGAI Trigger: AATGGCACCCGCCACCGGGAGAACTGTGGGAACCAAAGCGCGGATCCCCTCATGAAGGAAGTGGAGACCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS CAA 90 bp | GTGAGATGTCAGGGTCTCCACTTCCTTCATGAGGGGATCCGCGCTTaGGTTCCCACAGTTCTCCCGGTGGCGGGTGCCATTGTAGCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: VRCQGLHFLHEGIRA*VPTVLPVAGAIVAE Trigger: CTCGGCTACAATGGCACCCGCCACCGGGAGAACTGTGGGAACCAAAGCGCGGATCCCCTCATGAAGGAAGTGGAGACCCTGACATCTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS CCA 72 bp | GTAGGTGCTGGGCTGCTGAGCCATAGCCAATCAGCTTaGAGTCCCAGCAGAGGGGTGCGCTCAGCTCATAGA | + |
|
Preference number: 6 (lower is better) Translates to: VGAGLLSHSQSA*SPSRGVRSAHR Trigger: TCTATGAGCTGAGCGCACCCCTCTGCTGGGACTCCAAGCTGATTGGCTATGGCTCAGCAGCCCAGCACCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS CAA 72 bp | AGAGCAATCCGTACCCTTCATGAGGGGATCCGCGCTTaGGTTCCCACAGTTCTCCCGGTGGCGGGTGCCATT | + |
|
Preference number: 6 (lower is better) Translates to: RAIRTLHEGIRA*VPTVLPVAGAI Trigger: AATGGCACCCGCCACCGGGAGAACTGTGGGAACCAAAGCGCGGATCCCCTCATGAAGGGTACGGATTGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146431.3 |
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| CDS CAA 90 bp | ATGACAGGAAGAGCAATCCGTACCCTTCATGAGGGGATCCGCGCTTaGGTTCCCACAGTTCTCCCGGTGGCGGGTGCCATTGTAGCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: MTGRAIRTLHEGIRA*VPTVLPVAGAIVAE Trigger: CTCGGCTACAATGGCACCCGCCACCGGGAGAACTGTGGGAACCAAAGCGCGGATCCCCTCATGAAGGGTACGGATTGCTCTTCCTGTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146431.3 |
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| CDS CAA 90 bp | GAGAACAGAGCACCCTGCTCCGACTCGCTCACCAGCTTGGAAAGCTaGGCCCGGATGACAGGCGTCGTGACCAATGACAGGAAGAGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: ENRAPCSDSLTSLES*ARMTGVVTNDRKSN Trigger: ATTGCTCTTCCTGTCATTGGTCACGACGCCTGTCATCCGGGCCAAGCTTTCCAAGCTGGTGAGCGAGTCGGAGCAGGGTGCTCTGTTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS TCA 72 bp | GGGTCCAGTGAGATGTCAGGGTCTCCACTTCCTTCATaGGGGGATCCGCGCTTTGGTTCCCACAGTTCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: GSSEMSGSPLPS*GDPRFGSHSSP Trigger: GGGAGAACTGTGGGAACCAAAGCGCGGATCCCCTCATGAAGGAAGTGGAGACCCTGACATCTCACTGGACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS TCA 72 bp | GGGGCTGGAACCACATATAGCCGGGCAATGGATCGATaGTGGCGGAGCGTGAAAAGCCTGGTGGACTTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GAGTTYSRAMDR*WRSVKSLVDFG Trigger: GCCAAAGTCCACCAGGCTTTTCACGCTCCGCCATCATCGATCCATTGCCCGGCTATATGTGGTTCCAGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS GCA 72 bp | AACCGGTGCCAAAGGTACTGTGTGGTGAGCGGTCCCTaGAGAACCAGGGCAAAGTTGGCCAGGAAGACTAGG | + |
|
Preference number: 6 (lower is better) Translates to: NRCQRYCVVSGP*RTRAKLARKTR Trigger: CCTAGTCTTCCTGGCCAACTTTGCCCTGGTTCTGCAGGGACCGCTCACCACACAGTACCTTTGGCACCGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001126.4 ENSMUST00000146431.3 |
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| CDS CCA 72 bp | AGAACCCGACGTGCAGTTCTAGCTGCACCACAAAGATaGACACCACGGCCTGGAGCAGCAGACCAAGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RTRRAVLAAPQR*TPRPGAADQER Trigger: CCTCTCTTGGTCTGCTGCTCCAGGCCGTGGTGTCCATCTTTGTGGTGCAGCTAGAACTGCACGTCGGGTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS TCA 72 bp | GGAAAGCTTGGCCCGGATGACAGGCGTCGTGACCAATaGCAGGAAGAGCAATCCGTACCCTTCATGAGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GKLGPDDRRRDQ*QEEQSVPFMRG Trigger: TCCCCTCATGAAGGGTACGGATTGCTCTTCCTGTCATTGGTCACGACGCCTGTCATCCGGGCCAAGCTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146431.3 |
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| CDS GCA 72 bp | GCACAAAGAGCTCGGCCAAGCACGAAGAACCCGACGTaGAGTTCTAGCTGCACCACAAAGATGGACACCACG | + |
|
Preference number: 6 (lower is better) Translates to: AQRARPSTKNPT*SSSCTTKMDTT Trigger: CGTGGTGTCCATCTTTGTGGTGCAGCTAGAACTGCACGTCGGGTTCTTCGTGCTTGGCCGAGCTCTTTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
||
| CDS CCA 72 bp | AGTTCTAGCTGCACCACAAAGATGGACACCACGGCCTaGAGCAGCAGACCAAGAGAGGCCAGCACCAGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: SSSCTTKMDTTA*SSRPREASTSN Trigger: ATTGCTGGTGCTGGCCTCTCTTGGTCTGCTGCTCCAGGCCGTGGTGTCCATCTTTGTGGTGCAGCTAGAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS CAA 90 bp | AGGGGTGTAATGGTAGCAAACGCAAAGACCACCATTCCCAGGATGTaGAAAGCCAGGCCAATCTCAGCCACCCAGGTGTCAGCCAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: RGVMVANAKTTIPRM*KARPISATQVSARQ Trigger: CTGCCTGGCTGACACCTGGGTGGCTGAGATTGGCCTGGCTTTCAACATCCTGGGAATGGTGGTCTTTGCGTTTGCTACCATTACACCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS TCA 72 bp | CATATAGCCGGGCAATGGATCGATGATGGCGGAGCGTaGAAAGCCTGGTGGACTTTGGCTCCTTCACCGTCT | + |
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Preference number: 6 (lower is better) Translates to: HIAGQWIDDGGA*KAWWTLAPSPS Trigger: AGACGGTGAAGGAGCCAAAGTCCACCAGGCTTTTCACGCTCCGCCATCATCGATCCATTGCCCGGCTATATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS TCA 72 bp | GGAAAGCTTGGCCCGGATGACAGGCGTCGTGACCAATaGCAGGAAGAGCAATCCGTACCCTGTGAACATGAG | + |
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Preference number: 6 (lower is better) Translates to: GKLGPDDRRRDQ*QEEQSVPCEHE Trigger: CTCATGTTCACAGGGTACGGATTGCTCTTCCTGTCATTGGTCACGACGCCTGTCATCCGGGCCAAGCTTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS TCA 72 bp | GTGACCAATGACAGGAAGAGCAATCCGTACCCTTCATaGGGGGATCCGCGCTTTGGTTCCCACAGTTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: VTNDRKSNPYPS*GDPRFGSHSSP Trigger: GGGAGAACTGTGGGAACCAAAGCGCGGATCCCCTCATGAAGGGTACGGATTGCTCTTCCTGTCATTGGTCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146431.3 |
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| CDS GCA 72 bp | CATCCGGAAGGTGCGACTGTGGTTAGAGCTAACATCTaGCACAGAGGCAAAGCTAGCAGCAAGGAGGCCGTT | + |
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Preference number: 6 (lower is better) Translates to: HPEGATVVRANI*HRGKASSKEAV Trigger: AACGGCCTCCTTGCTGCTAGCTTTGCCTCTGTGGCAGATGTTAGCTCTAACCACAGTCGCACCTTCCGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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| CDS GCA 72 bp | ACCACCACGAATATGGCCAAAGAGTACAGGGCTAGATaGATCCTGGACTTTTCTGGGGCTGGAACCACATAT | + |
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Preference number: 6 (lower is better) Translates to: TTTNMAKEYRAR*ILDFSGAGTTY Trigger: ATATGTGGTTCCAGCCCCAGAAAAGTCCAGGATGCATCTAGCCCTGTACTCTTTGGCCATATTCGTGGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001126.4 |
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