Pregenerated sensors for SLC45A3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026435Ensembl transcript IDs: ENSMUST00000027695.8, ENSMUST00000177943.8, ENSMUST00000190322.2
Found 177 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCCCCGAAAGCTCTGGCTCCTATCTGTGCAACAATACACCTCACTaGCTTAGGGTGGCAGCAGAGAGCCACTTAGGCGACAAAGACCTG | + |
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Preference number: 1 (lower is better) Translates to: SPESSGSYLCNNTPH*LRVAAESHLGDKDL Trigger: CAGGTCTTTGTCGCCTAAGTGGCTCTCTGCTGCCACCCTAAGGCAGTGAGGTGTATTGTTGCACAGATAGGAGCCAGAGCTTTCGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR GCA 90 bp | GAGACTCAGCAGAAAGGCAGTGCTGTAGATCACGGGGTTTCATCTTaGCTGCTAGGGTTCCTCCTTCCAACTTCCACCCTGCCAAACCCT | + |
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Preference number: 1 (lower is better) Translates to: ETQQKGSAVDHGVSS*LLGFLLPTSTLPNP Trigger: AGGGTTTGGCAGGGTGGAAGTTGGAAGGAGGAACCCTAGCAGGCAAGATGAAACCCCGTGATCTACAGCACTGCCTTTCTGCTGAGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR CCA 90 bp | GCATCCTACAAGAAACTCCCATGCAAGAGCAACAGTGGCAGAATCTaGTCAAGGGACTTGGAGGGAAGTTTGTTCAGGTCCCCCAAATCC | + |
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Preference number: 1 (lower is better) Translates to: ASYKKLPCKSNSGRI*SRDLEGSLFRSPKS Trigger: GGATTTGGGGGACCTGAACAAACTTCCCTCCAAGTCCCTTGACCAGATTCTGCCACTGTTGCTCTTGCATGGGAGTTTCTTGTAGGATGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR CCA 90 bp | GTGGAGGAGAGCATCCTACAAGAAACTCCCATGCAAGAGCAACAGTaGCAGAATCTGGTCAAGGGACTTGGAGGGAAGTTTGTTCAGGTC | + |
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Preference number: 1 (lower is better) Translates to: VEESILQETPMQEQQ*QNLVKGLGGKFVQV Trigger: GACCTGAACAAACTTCCCTCCAAGTCCCTTGACCAGATTCTGCCACTGTTGCTCTTGCATGGGAGTTTCTTGTAGGATGCTCTCCTCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR CCA 90 bp | ACAGTCCTTTCCCATAGGGAGAAGTGGGCAATCAGGGAACCAAACTaGGTCAAGAGAGAATTGGGATTTGGTATGCTGTGGAGACCTTGG | + |
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Preference number: 1 (lower is better) Translates to: TVLSHREKWAIREPN*VKRELGFGMLWRPW Trigger: CCAAGGTCTCCACAGCATACCAAATCCCAATTCTCTCTTGACCCAGTTTGGTTCCCTGATTGCCCACTTCTCCCTATGGGAAAGGACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR CCA 90 bp | ACTTGGAAGGGCAATCTCTTCACAGTCCTTTCCCATAGGGAGAAGTaGGCAATCAGGGAACCAAACTGGGTCAAGAGAGAATTGGGATTT | + |
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Preference number: 1 (lower is better) Translates to: TWKGNLFTVLSHREK*AIREPNWVKRELGF Trigger: AAATCCCAATTCTCTCTTGACCCAGTTTGGTTCCCTGATTGCCCACTTCTCCCTATGGGAAAGGACTGTGAAGAGATTGCCCTTCCAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR-3UTR TCA 90 bp | CCTTCCAACTTCCACCCTGCCAAACCCTGTGGAGGAGAGCATCCTACAAGAAACAGGCCAGCCAGACTCTaGAGCCAGAGCCCCGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: PSNFHPAKPCGGEHPTRNRPARL*SQSPES Trigger: GCTTTCGGGGCTCTGGCTTCAGAGTCTGGCTGGCCT...GTTTCTTGTAGGATGCTCTCCTCCACAGGGTTTGGCAGGGTGGAAGTTGGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGATTGCCCGAGGTACTGGGCTGAGCAGTTTGGGGGACCATATCTATCACCCTGGAGAGGCCAGCTCTaGAGCCCTCTAAGGGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: RDCPRYWAEQFGGPYLSPWRGQL*SPLRAE Trigger: CTCAGCCCTTAGAGGGCTGCAGAGCTGGCCTCTCCA...GGGTGATAGATATGGTCCCCCAAACTGCTCAGCCCAGTACCTCGGGCAATCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR-3UTR TCA 90 bp | CATGCAAGAGCAACAGTGGCAGAATCTGGTCAAGGGACTTGGAGGGAAGTTTGTAGGCCAGCCAGACTCTaGAGCCAGAGCCCCGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: HARATVAESGQGTWREVCRPARL*SQSPES Trigger: GCTTTCGGGGCTCTGGCTTCAGAGTCTGGCTGGCCT...ACAAACTTCCCTCCAAGTCCCTTGACCAGATTCTGCCACTGTTGCTCTTGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR-3UTR GCA 90 bp | TTCCAACTTCCACCCTGCCAAACCCTGTGGAGGAGAGCATCCTACAAGAAACTCTGGAGAGGCCAGCTCTaGAGCCCTCTAAGGGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: FQLPPCQTLWRRASYKKLWRGQL*SPLRAE Trigger: CTCAGCCCTTAGAGGGCTGCAGAGCTGGCCTCTCCA...GAGTTTCTTGTAGGATGCTCTCCTCCACAGGGTTTGGCAGGGTGGAAGTTGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR-3UTR GCA 90 bp | GATTCCCCAGGCTGTGACAGATATGCCCCAGAGGCTGAGATGGGCAGAAGCCTATCTGGCTCCTATCTGTaGAACAATACACCTCACTGC | + |
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Preference number: 2 (lower is better) Translates to: DSPGCDRYAPEAEMGRSLSGSYL*NNTPHC Trigger: GCAGTGAGGTGTATTGTTGCACAGATAGGAGCCAGA...TAGGCTTCTGCCCATCTCAGCCTCTGGGGCATATCTGTCACAGCCTGGGGAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR-3UTR TCA 90 bp | CCTTCCAACTTCCACCCTGCCAAACCCTGTGGAGGAGAGCATCCTACAAGAAACTGCAGAACTTCAGAATaGCTTCCATGCGAGAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: PSNFHPAKPCGGEHPTRNCRTSE*LPCERL Trigger: CAGCCTCTCGCATGGAAGTCATTCTGAAGTTCTGCA...GTTTCTTGTAGGATGCTCTCCTCCACAGGGTTTGGCAGGGTGGAAGTTGGAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGAAGTTTGTTCAGGTCCCCCAAATCCTCCCTCTGGTGACTTAAGCAGGAGGGTTAACCTGGAGCCTTaGTACAGGACACCTGAACAG | + |
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Preference number: 2 (lower is better) Translates to: REVCSGPPNPPSGDLSRRVNLEP*YRTPEQ Trigger: CTGTTCAGGTGTCCTGTATCAAGGCTCCAGGTTAAC...CCTCCTGCTTAAGTCACCAGAGGGAGGATTTGGGGGACCTGAACAAACTTCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTCCAACTTCCACCCTGCCAAACCCTGTGGAGGAGAGCATCCTACAAGAAACAACAGTGGCAGAATCTaGTCAAGGGACTTGGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: PSNFHPAKPCGGEHPTRNNSGRI*SRDLEG Trigger: TCCCTCCAAGTCCCTTGACCAGATTCTGCCACTGTT...GTTTCTTGTAGGATGCTCTCCTCCACAGGGTTTGGCAGGGTGGAAGTTGGAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR CAA 90 bp | AGTGGGCAATCAGGGAACCAAACTGGGTCAAGAGAGAATTGGGATTaGGTATGCTGTGGAGACCTTGGGTCCCAATCCTTGAGCAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: SGQSGNQTGSRENWD*VCCGDLGSQSLSRN Trigger: GTTCCTGCTCAAGGATTGGGACCCAAGGTCTCCACAGCATACCAAATCCCAATTCTCTCTTGACCCAGTTTGGTTCCCTGATTGCCCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR CAA 90 bp | AGGGAGAAGTGGGCAATCAGGGAACCAAACTGGGTCAAGAGAGAATaGGGATTTGGTATGCTGTGGAGACCTTGGGTCCCAATCCTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: REKWAIREPNWVKRE*GFGMLWRPWVPILE Trigger: CTCAAGGATTGGGACCCAAGGTCTCCACAGCATACCAAATCCCAATTCTCTCTTGACCCAGTTTGGTTCCCTGATTGCCCACTTCTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR-3UTR TCA 90 bp | GTGGCAGAATCTGGTCAAGGGACTTGGAGGGAAGTTTGTTCAGGTCCCCCAAATTGCAGAACTTCAGAATaGCTTCCATGCGAGAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: VAESGQGTWREVCSGPPNCRTSE*LPCERL Trigger: CAGCCTCTCGCATGGAAGTCATTCTGAAGTTCTGCA...ATTTGGGGGACCTGAACAAACTTCCCTCCAAGTCCCTTGACCAGATTCTGCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGTCCTTTCCCATAGGGAGAAGTGGGCAATCAGGGAACCAAACTGGGTCAAGTTGGGTCCCAATCCTTaGGCAGGAACATCTTATGGC | + |
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Preference number: 2 (lower is better) Translates to: TVLSHREKWAIREPNWVKLGPNP*AGTSYG Trigger: GCCATAAGATGTTCCTGCTCAAGGATTGGGACCCAA...CTTGACCCAGTTTGGTTCCCTGATTGCCCACTTCTCCCTATGGGAAAGGACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGATTGCCCGAGGTACTGGGCTGAGCAGTTTGGGGGACCATATCTATCACCCTACAAGAAACTCCCATaGAAGAGCAACAGTGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: RDCPRYWAEQFGGPYLSPYKKLP*KSNSGR Trigger: TCTGCCACTGTTGCTCTTGCATGGGAGTTTCTTGTA...GGGTGATAGATATGGTCCCCCAAACTGCTCAGCCCAGTACCTCGGGCAATCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCAACTTCCACCCTGCCAAACCCTGTGGAGGAGAGCATCCTACAAGAAACTCAACAGTGGCAGAATCTaGTCAAGGGACTTGGAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: FQLPPCQTLWRRASYKKLNSGRI*SRDLEG Trigger: TCCCTCCAAGTCCCTTGACCAGATTCTGCCACTGTT...GAGTTTCTTGTAGGATGCTCTCCTCCACAGGGTTTGGCAGGGTGGAAGTTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR-3UTR GCA 90 bp | TCAGGTCCCCCAAATCCTCCCTCTGGTGACTTAAGCAGGAGGTTAGCTGTTAACTCTGGCTCCTATCTGTaGAACAATACACCTCACTGC | + |
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Preference number: 2 (lower is better) Translates to: SGPPNPPSGDLSRRLAVNSGSYL*NNTPHC Trigger: GCAGTGAGGTGTATTGTTGCACAGATAGGAGCCAGA...GTTAACAGCTAACCTCCTGCTTAAGTCACCAGAGGGAGGATTTGGGGGACCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR-3UTR TCA 90 bp | AAGAGAGAATTGGGATTTGGTATGCTGTGGAGACCTTGGGTCCCAATCCTTGAGAAATCCTCCCTCTGGTaGCTTAAGCAGGAGGTTAGC | + |
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Preference number: 2 (lower is better) Translates to: KRELGFGMLWRPWVPILEKSSLW*LKQEVS Trigger: GCTAACCTCCTGCTTAAGTCACCAGAGGGAGGATTT...CTCAAGGATTGGGACCCAAGGTCTCCACAGCATACCAAATCCCAATTCTCTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR-3UTR GCA 90 bp | ACATTTCAATCCCTGCAGAACTTCAGAATGACTTCCATGCGAGAGGCTGCCAGTAACAATACACCTCACTaGCTTAGGGTGGCAGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: TFQSLQNFRMTSMREAASNNTPH*LRVAAE Trigger: CTCTGCTGCCACCCTAAGGCAGTGAGGTGTATTGTT...ACTGGCAGCCTCTCGCATGGAAGTCATTCTGAAGTTCTGCAGGGATTGAAATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR-3UTR GCA 90 bp | GATAACATTATTGCAATCAGCACTGAAATCCCCCTCGACGTGATGAGCTCACTGTTCCAACTTCCACCCTaGCAAACCCTGTGGAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: DNIIAISTEIPLDVMSSLFQLPP*QTLWRR Trigger: TCTCCTCCACAGGGTTTGGCAGGGTGGAAGTTGGAA...CAGTGAGCTCATCACGTCGAGGGGGATTTCAGTGCTGATTGCAATAATGTTATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR-3UTR CCA 90 bp | GATAACATTATTGCAATCAGCACTGAAATCCCCCTCGACGTGATGAGCTCACTGATGCTGTGGAGACCTTaGGTCCCAATCCTTGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: DNIIAISTEIPLDVMSSLMLWRP*VPILEQ Trigger: CTGCTCAAGGATTGGGACCCAAGGTCTCCACAGCAT...CAGTGAGCTCATCACGTCGAGGGGGATTTCAGTGCTGATTGCAATAATGTTATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR-3UTR CCA 90 bp | GATAACATTATTGCAATCAGCACTGAAATCCCCCTCGACGTGATGAGCTCACTGTCCCATAGGGAGAAGTaGGCAATCAGGGAACCAAAC | + |
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Preference number: 2 (lower is better) Translates to: DNIIAISTEIPLDVMSSLSHREK*AIREPN Trigger: GTTTGGTTCCCTGATTGCCCACTTCTCCCTATGGGA...CAGTGAGCTCATCACGTCGAGGGGGATTTCAGTGCTGATTGCAATAATGTTATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR-3UTR TCA 90 bp | TACAAGAAACTCCCATGCAAGAGCAACAGTGGCAGAATCTGGTCAAGGGACTTGTTGATACAGGACACCTaGACAGACCACATTTCAATC | + |
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Preference number: 2 (lower is better) Translates to: YKKLPCKSNSGRIWSRDLLIQDT*TDHISI Trigger: GATTGAAATGTGGTCTGTTCAGGTGTCCTGTATCAA...CAAGTCCCTTGACCAGATTCTGCCACTGTTGCTCTTGCATGGGAGTTTCTTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR-3UTR TCA 90 bp | ATCCCACCCTACTCAACTCCTAGGCACAACATAAAAAGGCTGGGAATGAATTTTAAATCCTCCCTCTGGTaGCTTAAGCAGGAGGTTAGC | + |
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Preference number: 2 (lower is better) Translates to: IPPYSTPRHNIKRLGMNFKSSLW*LKQEVS Trigger: GCTAACCTCCTGCTTAAGTCACCAGAGGGAGGATTT...AAAATTCATTCCCAGCCTTTTTATGTTGTGCCTAGGAGTTGAGTAGGGTGGGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR-3UTR CCA 90 bp | GATAACATTATTGCAATCAGCACTGAAATCCCCCTCGACGTGATGAGCTCACTGGGGTCAAGAGAGAATTaGGATTTGGTATGCTGTGGA | + |
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Preference number: 2 (lower is better) Translates to: DNIIAISTEIPLDVMSSLGSREN*DLVCCG Trigger: TCCACAGCATACCAAATCCCAATTCTCTCTTGACCC...CAGTGAGCTCATCACGTCGAGGGGGATTTCAGTGCTGATTGCAATAATGTTATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR TCA 72 bp | TCCATGCGAGAGGCTGCCAGTAGGCCAGCCAGACTCTaGAGCCAGAGCCCCGAAAGCTCTGGCTCCTATCTG | + |
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Preference number: 3 (lower is better) Translates to: SMREAASRPARL*SQSPESSGSYL Trigger: CAGATAGGAGCCAGAGCTTTCGGGGCTCTGGCTTCAGAGTCTGGCTGGCCTACTGGCAGCCTCTCGCATGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR GCA 72 bp | CAGAAAGGCAGTGCTGTAGATCACGGGGTTTCATCTTaGCTGCTAGGGTTCCTCCTTCCAACTTCCACCCTG | + |
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Preference number: 3 (lower is better) Translates to: QKGSAVDHGVSS*LLGFLLPTSTL Trigger: CAGGGTGGAAGTTGGAAGGAGGAACCCTAGCAGGCAAGATGAAACCCCGTGATCTACAGCACTGCCTTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR CCA 72 bp | GCAAGAGCAACAGTGGCAGAATCTGGTCAAGGGACTTaGAGGGAAGTTTGTTCAGGTCCCCCAAATCCTCCC | + |
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Preference number: 3 (lower is better) Translates to: ARATVAESGQGT*REVCSGPPNPP Trigger: GGGAGGATTTGGGGGACCTGAACAAACTTCCCTCCAAGTCCCTTGACCAGATTCTGCCACTGTTGCTCTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR TCA 72 bp | AACAGACCACATTTCAATCCCTGCAGAACTTCAGAATaGCTTCCATGCGAGAGGCTGCCAGTAGGCCAGCCA | + |
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Preference number: 3 (lower is better) Translates to: NRPHFNPCRTSE*LPCERLPVGQP Trigger: TGGCTGGCCTACTGGCAGCCTCTCGCATGGAAGTCATTCTGAAGTTCTGCAGGGATTGAAATGTGGTCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR CCA 72 bp | AAGAAACTCCCATGCAAGAGCAACAGTGGCAGAATCTaGTCAAGGGACTTGGAGGGAAGTTTGTTCAGGTCC | + |
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Preference number: 3 (lower is better) Translates to: KKLPCKSNSGRI*SRDLEGSLFRS Trigger: GGACCTGAACAAACTTCCCTCCAAGTCCCTTGACCAGATTCTGCCACTGTTGCTCTTGCATGGGAGTTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR CCA 72 bp | TCCCATAGGGAGAAGTGGGCAATCAGGGAACCAAACTaGGTCAAGAGAGAATTGGGATTTGGTATGCTGTGG | + |
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Preference number: 3 (lower is better) Translates to: SHREKWAIREPN*VKRELGFGMLW Trigger: CCACAGCATACCAAATCCCAATTCTCTCTTGACCCAGTTTGGTTCCCTGATTGCCCACTTCTCCCTATGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR CCA 72 bp | GGCAATCTCTTCACAGTCCTTTCCCATAGGGAGAAGTaGGCAATCAGGGAACCAAACTGGGTCAAGAGAGAA | + |
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Preference number: 3 (lower is better) Translates to: GNLFTVLSHREK*AIREPNWVKRE Trigger: TTCTCTCTTGACCCAGTTTGGTTCCCTGATTGCCCACTTCTCCCTATGGGAAAGGACTGTGAAGAGATTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR CCA 72 bp | GACCTTGGGTCCCAATCCTTGAGCAGGAACATCTTATaGCTCTCAATTAGGATGAAGAGATTGCCCGAGGTA | + |
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Preference number: 3 (lower is better) Translates to: DLGSQSLSRNIL*LSIRMKRLPEV Trigger: TACCTCGGGCAATCTCTTCATCCTAATTGAGAGCCATAAGATGTTCCTGCTCAAGGATTGGGACCCAAGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR CCA 72 bp | AACTGGGTCAAGAGAGAATTGGGATTTGGTATGCTGTaGAGACCTTGGGTCCCAATCCTTGAGCAGGAACAT | + |
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Preference number: 3 (lower is better) Translates to: NWVKRELGFGML*RPWVPILEQEH Trigger: ATGTTCCTGCTCAAGGATTGGGACCCAAGGTCTCCACAGCATACCAAATCCCAATTCTCTCTTGACCCAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS-3UTR CCA 90 bp | GATTCCCCAGGCTGTGACAGATATGCCCCAGAGGCTGAGATGGGCAGAAGCCTACCGGGCCTCGGTGCCTaGCTCGGCTCTGGGTACACC | + |
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Preference number: 4 (lower is better) Translates to: DSPGCDRYAPEAEMGRSLPGLGA*LGSGYT Trigger: GGTGTACCCAGAGCCGAGCCAGGCACCGAGGCCCGG...TAGGCTTCTGCCCATCTCAGCCTCTGGGGCATATCTGTCACAGCCTGGGGAATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS-3UTR GCA 90 bp | GGCCAGCCAGACTCTGAAGCCAGAGCCCCGAAAGCTCTGGCTCCTATCTGTGCACCAGGATGCCGCTGCTaGCAGAGCCCACGTGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: GQPDSEARAPKALAPICAPGCRC*QSPRVH Trigger: ATGGACACGTGGGCTCTGGCAGCAGCGGCATCCTGG...TGCACAGATAGGAGCCAGAGCTTTCGGGGCTCTGGCTTCAGAGTCTGGCTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS-3UTR CCA 90 bp | CTGTGCAACAATACACCTCACTGCCTTAGGGTGGCAGCAGAGAGCCACTTAGGCCCGGGCCTCGGTGCCTaGCTCGGCTCTGGGTACACC | + |
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Preference number: 4 (lower is better) Translates to: LCNNTPHCLRVAAESHLGPGLGA*LGSGYT Trigger: GGTGTACCCAGAGCCGAGCCAGGCACCGAGGCCCGG...GCCTAAGTGGCTCTCTGCTGCCACCCTAAGGCAGTGAGGTGTATTGTTGCACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS-3UTR CCA 90 bp | GGCCAGCCAGACTCTGAAGCCAGAGCCCCGAAAGCTCTGGCTCCTATCTGTGCAACTACCACCACGCTGTaGGACAGGCAGGTGGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: GQPDSEARAPKALAPICATTTTL*DRQVAA Trigger: CGCTGCCACCTGCCTGTCCCACAGCGTGGTGGTAGT...TGCACAGATAGGAGCCAGAGCTTTCGGGGCTCTGGCTTCAGAGTCTGGCTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS-3UTR GCA 90 bp | AGAGATTGCCCGAGGTACTGGGCTGAGCAGTTTGGGGGACCATATCTATCACCCGGGCCAGGATGCCGCTaGTGCCAGAGCCCACGTGTC | + |
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Preference number: 4 (lower is better) Translates to: RDCPRYWAEQFGGPYLSPGPGCR*CQSPRV Trigger: GACACGTGGGCTCTGGCAGCAGCGGCATCCTGGCCC...GGGTGATAGATATGGTCCCCCAAACTGCTCAGCCCAGTACCTCGGGCAATCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS-3UTR GCA 90 bp | CTGTGCAACAATACACCTCACTGCCTTAGGGTGGCAGCAGAGAGCCACTTAGGCGTGGAGGGGCCAGGATaGCGCTGCTGCCAGAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: LCNNTPHCLRVAAESHLGVEGPG*RCCQSP Trigger: TGGGCTCTGGCAGCAGCGGCATCCTGGCCCCTCCAC...GCCTAAGTGGCTCTCTGCTGCCACCCTAAGGCAGTGAGGTGTATTGTTGCACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS-3UTR TCA 90 bp | CTGTGCAACAATACACCTCACTGCCTTAGGGTGGCAGCAGAGAGCCACTTAGGCCCCGGTGAGGGCAGCTaGGGCTGTCACTACCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LCNNTPHCLRVAAESHLGPGEGS*GCHYHH Trigger: GTGGTGGTAGTGACAGCCTCAGCTGCCCTCACCGGG...GCCTAAGTGGCTCTCTGCTGCCACCCTAAGGCAGTGAGGTGTATTGTTGCACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR GCA 90 bp | CTGTGCAACAATACACCTCACTGCCTTAGGGTGGCAGCAGAGAGCCACTTAGGCTGGGTACAGCAGTCCTaGCAGCCAGCCAGCCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LCNNTPHCLRVAAESHLGWVQQS*QPASPR Trigger: CCGAGGGCTGGCTGGCTGGCAGGACTGCTGTACCCA...GCCTAAGTGGCTCTCTGCTGCCACCCTAAGGCAGTGAGGTGTATTGTTGCACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR GCA 90 bp | CCTTCCAACTTCCACCCTGCCAAACCCTGTGGAGGAGAGCATCCTACAAGAAACGTGGAGGGGCCAGGATaGCGCTGCTGCCAGAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSNFHPAKPCGGEHPTRNVEGPG*RCCQSP Trigger: TGGGCTCTGGCAGCAGCGGCATCCTGGCCCCTCCAC...GTTTCTTGTAGGATGCTCTCCTCCACAGGGTTTGGCAGGGTGGAAGTTGGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR CCA 90 bp | GATTCCCCAGGCTGTGACAGATATGCCCCAGAGGCTGAGATGGGCAGAAGCCTATTGGCGGCAGTGGTCTaGGTCCCGGAAGAGGTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: DSPGCDRYAPEAEMGRSLLAAVV*VPEEVG Trigger: TCCGACCTCTTCCGGGACCCAGACCACTGCCGCCAA...TAGGCTTCTGCCCATCTCAGCCTCTGGGGCATATCTGTCACAGCCTGGGGAATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR CCA 90 bp | AGCCAGACTCTGAAGCCAGAGCCCCGAAAGCTCTGGCTCCTATCTGTGCAACAACCCACAGAGTGCAGGTaGAGGGGCCAGGATGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SQTLKPEPRKLWLLSVQQPTECR*RGQDAA Trigger: AGCGGCATCCTGGCCCCTCCACCTGCACTCTGTGGG...TTGTTGCACAGATAGGAGCCAGAGCTTTCGGGGCTCTGGCTTCAGAGTCTGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR GCA 90 bp | CTGAAGCCAGAGCCCCGAAAGCTCTGGCTCCTATCTGTGCAACAATACACCTCATGGGTACAGCAGTCCTaGCAGCCAGCCAGCCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LKPEPRKLWLLSVQQYTSWVQQS*QPASPR Trigger: CCGAGGGCTGGCTGGCTGGCAGGACTGCTGTACCCA...TGAGGTGTATTGTTGCACAGATAGGAGCCAGAGCTTTCGGGGCTCTGGCTTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR GCA 90 bp | AGCCAGACTCTGAAGCCAGAGCCCCGAAAGCTCTGGCTCCTATCTGTGCAACAACGGCAGCACAGCTGCTaGAGCCGGGGAAACAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SQTLKPEPRKLWLLSVQQRQHSC*SRGNRV Trigger: TACCCTGTTTCCCCGGCTGCAGCAGCTGTGCTGCCG...TTGTTGCACAGATAGGAGCCAGAGCTTTCGGGGCTCTGGCTTCAGAGTCTGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR GCA 90 bp | AGCCAGACTCTGAAGCCAGAGCCCCGAAAGCTCTGGCTCCTATCTGTGCAACAAGTAGGGTGCGAGGCATaGGGCAGCACAGCTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SQTLKPEPRKLWLLSVQQVGCEA*GSTAAA Trigger: TGCAGCAGCTGTGCTGCCGCATGCCTCGCACCCTAC...TTGTTGCACAGATAGGAGCCAGAGCTTTCGGGGCTCTGGCTTCAGAGTCTGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCACCCTGCCAAACCCTGTGGAGGAGAGCATCCTACAAGAAACTCCCATGCAGAGTCGGCGTAGGGTaGGAGGCATGCGGCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LPPCQTLWRRASYKKLPCRVGVG*EACGST Trigger: TGTGCTGCCGCATGCCTCGCACCCTACGCCGACTCT...GCATGGGAGTTTCTTGTAGGATGCTCTCCTCCACAGGGTTTGGCAGGGTGGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR GCA 90 bp | CTGTGCAACAATACACCTCACTGCCTTAGGGTGGCAGCAGAGAGCCACTTAGGCAGAGTCGGCGTAGGGTaGGAGGCATGCGGCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LCNNTPHCLRVAAESHLGRVGVG*EACGST Trigger: TGTGCTGCCGCATGCCTCGCACCCTACGCCGACTCT...GCCTAAGTGGCTCTCTGCTGCCACCCTAAGGCAGTGAGGTGTATTGTTGCACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR GCA 90 bp | TTCCAACTTCCACCCTGCCAAACCCTGTGGAGGAGAGCATCCTACAAGAAACTCGTCTCCGGGCCTCGGTaGCTGGCTCGGCTCTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: FQLPPCQTLWRRASYKKLVSGPR*LARLWV Trigger: TACCCAGAGCCGAGCCAGGCACCGAGGCCCGGAGAC...GAGTTTCTTGTAGGATGCTCTCCTCCACAGGGTTTGGCAGGGTGGAAGTTGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR GCA 90 bp | GGCCAGCCAGACTCTGAAGCCAGAGCCCCGAAAGCTCTGGCTCCTATCTGTGCAGGAAGAGCCCCAGGCTaGCCATTCGAATGCCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GQPDSEARAPKALAPICAGRAPG*PFECLH Trigger: ATGAAGGCATTCGAATGGGCAGCCTGGGGCTCTTCC...TGCACAGATAGGAGCCAGAGCTTTCGGGGCTCTGGCTTCAGAGTCTGGCTGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCAGAATCTGGTCAAGGGACTTGGAGGGAAGTTTGTTCAGGTCCCCCAAATCCCGGTGAGGGCAGCTaGGGCTGTCACTACCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: VAESGQGTWREVCSGPPNPGEGS*GCHYHH Trigger: GTGGTGGTAGTGACAGCCTCAGCTGCCCTCACCGGG...ATTTGGGGGACCTGAACAAACTTCCCTCCAAGTCCCTTGACCAGATTCTGCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR GCA 90 bp | CTGAAGCCAGAGCCCCGAAAGCTCTGGCTCCTATCTGTGCAACAATACACCTCACGGCAGCACAGCTGCTaGAGCCGGGGAAACAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LKPEPRKLWLLSVQQYTSRQHSC*SRGNRV Trigger: TACCCTGTTTCCCCGGCTGCAGCAGCTGTGCTGCCG...TGAGGTGTATTGTTGCACAGATAGGAGCCAGAGCTTTCGGGGCTCTGGCTTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR GCA 90 bp | AAACTGGGTCAAGAGAGAATTGGGATTTGGTATGCTGTGGAGACCTTGGGTCCCGTCTCCGGGCCTCGGTaGCTGGCTCGGCTCTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: KLGQERIGIWYAVETLGPVSGPR*LARLWV Trigger: TACCCAGAGCCGAGCCAGGCACCGAGGCCCGGAGAC...GGGACCCAAGGTCTCCACAGCATACCAAATCCCAATTCTCTCTTGACCCAGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR GCA 90 bp | GTGGCAGAATCTGGTCAAGGGACTTGGAGGGAAGTTTGTTCAGGTCCCCCAAATGGCTGTCCTCACCGCTaGTACCTCCAGCGTCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VAESGQGTWREVCSGPPNGCPHR*YLQRPL Trigger: GAGGGGACGCTGGAGGTAGCAGCGGTGAGGACAGCC...ATTTGGGGGACCTGAACAAACTTCCCTCCAAGTCCCTTGACCAGATTCTGCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR GCA 90 bp | CTGAAGCCAGAGCCCCGAAAGCTCTGGCTCCTATCTGTGCAACAATACACCTCACCAGGATGCCGCTGCTaGCAGAGCCCACGTGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LKPEPRKLWLLSVQQYTSPGCRC*QSPRVH Trigger: ATGGACACGTGGGCTCTGGCAGCAGCGGCATCCTGG...TGAGGTGTATTGTTGCACAGATAGGAGCCAGAGCTTTCGGGGCTCTGGCTTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR GCA 90 bp | CATGCAAGAGCAACAGTGGCAGAATCTGGTCAAGGGACTTGGAGGGAAGTTTGTGGGCCAGGATGCCGCTaGTGCCAGAGCCCACGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: HARATVAESGQGTWREVCGPGCR*CQSPRV Trigger: GACACGTGGGCTCTGGCAGCAGCGGCATCCTGGCCC...ACAAACTTCCCTCCAAGTCCCTTGACCAGATTCTGCCACTGTTGCTCTTGCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCACCCTGCCAAACCCTGTGGAGGAGAGCATCCTACAAGAAACTCCCATGCAGGGGGCCAGAACGCTaGTGTCCCAGTCAATGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPPCQTLWRRASYKKLPCRGPER*CPSQWQ Trigger: CTGCCATTGACTGGGACACCAGCGTTCTGGCCCCCT...GCATGGGAGTTTCTTGTAGGATGCTCTCCTCCACAGGGTTTGGCAGGGTGGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGTTTGTTCAGGTCCCCCAAATCCTCCCTCTGGTGACTTAAGCAGGAGGGCTCTGGGTACACCCTaGTACAGCCCCTCTCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: REVCSGPPNPPSGDLSRRALGTP*YSPSPT Trigger: CGTGGGAGAGGGGCTGTACCAGGGTGTACCCAGAGC...CCTCCTGCTTAAGTCACCAGAGGGAGGATTTGGGGGACCTGAACAAACTTCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR CCA 90 bp | CTGAAGCCAGAGCCCCGAAAGCTCTGGCTCCTATCTGTGCAACAATACACCTCAGCTCTGGGTACACCCTaGTACAGCCCCTCTCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: LKPEPRKLWLLSVQQYTSALGTP*YSPSPT Trigger: CGTGGGAGAGGGGCTGTACCAGGGTGTACCCAGAGC...TGAGGTGTATTGTTGCACAGATAGGAGCCAGAGCTTTCGGGGCTCTGGCTTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR TCA 90 bp | CTGAAGCCAGAGCCCCGAAAGCTCTGGCTCCTATCTGTGCAACAATACACCTCAGGACAATGGAGCCCATaGACAGGGACGGAGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: LKPEPRKLWLLSVQQYTSGQWSP*TGTEPP Trigger: AGGTGGCTCCGTCCCTGTTCATGGGCTCCATTGTCC...TGAGGTGTATTGTTGCACAGATAGGAGCCAGAGCTTTCGGGGCTCTGGCTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS-3UTR CCA 90 bp | TCAGGTCCCCCAAATCCTCCCTCTGGTGACTTAAGCAGGAGGTTAGCTGTTAACGCCGTAGCAGACGGCTaGCCCACAGCCTCTGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: SGPPNPPSGDLSRRLAVNAVADG*PTASGS Trigger: TGATCCAGAGGCTGTGGGCCAGCCGTCTGCTACGGC...GTTAACAGCTAACCTCCTGCTTAAGTCACCAGAGGGAGGATTTGGGGGACCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS-3UTR CCA 90 bp | GTGGCAGAATCTGGTCAAGGGACTTGGAGGGAAGTTTGTTCAGGTCCCCCAAATGCCGTAGCAGACGGCTaGCCCACAGCCTCTGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: VAESGQGTWREVCSGPPNAVADG*PTASGS Trigger: TGATCCAGAGGCTGTGGGCCAGCCGTCTGCTACGGC...ATTTGGGGGACCTGAACAAACTTCCCTCCAAGTCCCTTGACCAGATTCTGCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR CCA 90 bp | AGAGATTGCCCGAGGTACTGGGCTGAGCAGTTTGGGGGACCATATCTATCACCCCACGCCACTGGTCACTaGCTGAGCCTAGGAGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RDCPRYWAEQFGGPYLSPHATGH*LSLGVE Trigger: TTCCACTCCTAGGCTCAGCCAGTGACCAGTGGCGTG...GGGTGATAGATATGGTCCCCCAAACTGCTCAGCCCAGTACCTCGGGCAATCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR CCA 90 bp | ACAGTCCTTTCCCATAGGGAGAAGTGGGCAATCAGGGAACCAAACTGGGTCAAGTTGGCGGCAGTGGTCTaGGTCCCGGAAGAGGTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: TVLSHREKWAIREPNWVKLAAVV*VPEEVG Trigger: TCCGACCTCTTCCGGGACCCAGACCACTGCCGCCAA...CTTGACCCAGTTTGGTTCCCTGATTGCCCACTTCTCCCTATGGGAAAGGACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS-3UTR CCA 90 bp | TCAGGTCCCCCAAATCCTCCCTCTGGTGACTTAAGCAGGAGGTTAGCTGTTAACACTACCACCACGCTGTaGGACAGGCAGGTGGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SGPPNPPSGDLSRRLAVNTTTTL*DRQVAA Trigger: CGCTGCCACCTGCCTGTCCCACAGCGTGGTGGTAGT...GTTAACAGCTAACCTCCTGCTTAAGTCACCAGAGGGAGGATTTGGGGGACCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS-3UTR CCA 90 bp | GATTCCCCAGGCTGTGACAGATATGCCCCAGAGGCTGAGATGGGCAGAAGCCTACGTCCCCTCGGTATTTaGGCAGGAACACCTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DSPGCDRYAPEAEMGRSLRPLGI*AGTPAS Trigger: AGAAGCAGGTGTTCCTGCCCAAATACCGAGGGGACG...TAGGCTTCTGCCCATCTCAGCCTCTGGGGCATATCTGTCACAGCCTGGGGAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCAGAATCTGGTCAAGGGACTTGGAGGGAAGTTTGTTCAGGTCCCCCAAATTTGACCAGCAGGAGCTaGGCTTTCCGGTGCCGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VAESGQGTWREVCSGPPNLTSRS*AFRCRS Trigger: GCTACGGCACCGGAAAGCTCAGCTCCTGCTGGTCAA...ATTTGGGGGACCTGAACAAACTTCCCTCCAAGTCCCTTGACCAGATTCTGCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS-3UTR TCA 90 bp | GATTCCCCAGGCTGTGACAGATATGCCCCAGAGGCTGAGATGGGCAGAAGCCTAACCCAAGCCTGCAGCTaGTACCATATAGGCAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: DSPGCDRYAPEAEMGRSLTQACS*YHIGSD Trigger: GTCACTGCCTATATGGTATCAGCTGCAGGCTTGGGT...TAGGCTTCTGCCCATCTCAGCCTCTGGGGCATATCTGTCACAGCCTGGGGAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR GCA 90 bp | CATGCAAGAGCAACAGTGGCAGAATCTGGTCAAGGGACTTGGAGGGAAGTTTGTGTAGGGTGCGAGGCATaGGGCAGCACAGCTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HARATVAESGQGTWREVCVGCEA*GSTAAA Trigger: TGCAGCAGCTGTGCTGCCGCATGCCTCGCACCCTAC...ACAAACTTCCCTCCAAGTCCCTTGACCAGATTCTGCCACTGTTGCTCTTGCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR GCA 90 bp | GTGGCAGAATCTGGTCAAGGGACTTGGAGGGAAGTTTGTTCAGGTCCCCCAAATAGGGAGATGGCACACTaGAGGAAGAGCCCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VAESGQGTWREVCSGPPNREMAH*RKSPRL Trigger: CAGCCTGGGGCTCTTCCTGCAGTGTGCCATCTCCCT...ATTTGGGGGACCTGAACAAACTTCCCTCCAAGTCCCTTGACCAGATTCTGCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR CCA 90 bp | GATTCCCCAGGCTGTGACAGATATGCCCCAGAGGCTGAGATGGGCAGAAGCCTAGGAGTAAAGCACACCTaGCCACAAAAGTCCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DSPGCDRYAPEAEMGRSLGVKHT*PQKSSS Trigger: GCTGCTGGACTTTTGTGGCCAGGTGTGCTTTACTCC...TAGGCTTCTGCCCATCTCAGCCTCTGGGGCATATCTGTCACAGCCTGGGGAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR CCA 90 bp | AAACTGGGTCAAGAGAGAATTGGGATTTGGTATGCTGTGGAGACCTTGGGTCCCAAGGCTTGGCGGCAGTaGTCTGGGTCCCGGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KLGQERIGIWYAVETLGPKAWRQ*SGSRKR Trigger: CCTCTTCCGGGACCCAGACCACTGCCGCCAAGCCTT...GGGACCCAAGGTCTCCACAGCATACCAAATCCCAATTCTCTCTTGACCCAGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR CCA 90 bp | CATGCAAGAGCAACAGTGGCAGAATCTGGTCAAGGGACTTGGAGGGAAGTTTGTTGCCTGGCTCGGCTCTaGGTACACCCTGGTACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HARATVAESGQGTWREVCCLARL*VHPGTA Trigger: GGCTGTACCAGGGTGTACCCAGAGCCGAGCCAGGCA...ACAAACTTCCCTCCAAGTCCCTTGACCAGATTCTGCCACTGTTGCTCTTGCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR CCA 90 bp | AGAGATTGCCCGAGGTACTGGGCTGAGCAGTTTGGGGGACCATATCTATCACCCAGAAGACCAGGGAGATaGCACACTGCAGGAAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RDCPRYWAEQFGGPYLSPRRPGR*HTAGRA Trigger: GGCTCTTCCTGCAGTGTGCCATCTCCCTGGTCTTCT...GGGTGATAGATATGGTCCCCCAAACTGCTCAGCCCAGTACCTCGGGCAATCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR CCA 90 bp | CTGAAGCCAGAGCCCCGAAAGCTCTGGCTCCTATCTGTGCAACAATACACCTCAGGCCTGGCAAGAAGCTaGTTGTCTGGCTGTCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LKPEPRKLWLLSVQQYTSGLARS*LSGCPH Trigger: GTGAGGACAGCCAGACAACCAGCTTCTTGCCAGGCC...TGAGGTGTATTGTTGCACAGATAGGAGCCAGAGCTTTCGGGGCTCTGGCTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR CCA 90 bp | AGCCAGACTCTGAAGCCAGAGCCCCGAAAGCTCTGGCTCCTATCTGTGCAACAATCCTGGCTTAGGGCCTaGCAAGAAGCTGGTTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQTLKPEPRKLWLLSVQQSWLRA*QEAGCL Trigger: CAGACAACCAGCTTCTTGCCAGGCCCTAAGCCAGGA...TTGTTGCACAGATAGGAGCCAGAGCTTTCGGGGCTCTGGCTTCAGAGTCTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR CCA 90 bp | CTGTGCAACAATACACCTCACTGCCTTAGGGTGGCAGCAGAGAGCCACTTAGGCTCCTGGCTTAGGGCCTaGCAAGAAGCTGGTTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LCNNTPHCLRVAAESHLGSWLRA*QEAGCL Trigger: CAGACAACCAGCTTCTTGCCAGGCCCTAAGCCAGGA...GCCTAAGTGGCTCTCTGCTGCCACCCTAAGGCAGTGAGGTGTATTGTTGCACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR CCA 90 bp | CTGAAGCCAGAGCCCCGAAAGCTCTGGCTCCTATCTGTGCAACAATACACCTCAAGCCCACGTGTCCATTaGGGAAGAGAGCTCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LKPEPRKLWLLSVQQYTSSPRVH*GRELLA Trigger: AGCCAGGAGCTCTCTTCCCCAATGGACACGTGGGCT...TGAGGTGTATTGTTGCACAGATAGGAGCCAGAGCTTTCGGGGCTCTGGCTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR TCA 90 bp | CTGTGCAACAATACACCTCACTGCCTTAGGGTGGCAGCAGAGAGCCACTTAGGCACCCAAGCCTGCAGCTaGTACCATATAGGCAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LCNNTPHCLRVAAESHLGTQACS*YHIGSD Trigger: GTCACTGCCTATATGGTATCAGCTGCAGGCTTGGGT...GCCTAAGTGGCTCTCTGCTGCCACCCTAAGGCAGTGAGGTGTATTGTTGCACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR GCA 90 bp | ACATTTCAATCCCTGCAGAACTTCAGAATGACTTCCATGCGAGAGGCTGCCAGTATGCGGCAGCACAGCTaGTGCAGCCGGGGAAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: TFQSLQNFRMTSMREAASMRQHS*CSRGNR Trigger: CCTGTTTCCCCGGCTGCAGCAGCTGTGCTGCCGCAT...ACTGGCAGCCTCTCGCATGGAAGTCATTCTGAAGTTCTGCAGGGATTGAAATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR GCA 90 bp | CTGAAGCCAGAGCCCCGAAAGCTCTGGCTCCTATCTGTGCAACAATACACCTCAGGAAGAGCCCCAGGCTaGCCATTCGAATGCCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LKPEPRKLWLLSVQQYTSGRAPG*PFECLH Trigger: ATGAAGGCATTCGAATGGGCAGCCTGGGGCTCTTCC...TGAGGTGTATTGTTGCACAGATAGGAGCCAGAGCTTTCGGGGCTCTGGCTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR GCA 90 bp | GATAACATTATTGCAATCAGCACTGAAATCCCCCTCGACGTGATGAGCTCACTGGGCTGTCCTCACCGCTaGTACCTCCAGCGTCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: DNIIAISTEIPLDVMSSLGCPHR*YLQRPL Trigger: GAGGGGACGCTGGAGGTAGCAGCGGTGAGGACAGCC...CAGTGAGCTCATCACGTCGAGGGGGATTTCAGTGCTGATTGCAATAATGTTATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR CCA 90 bp | CCTTCCAACTTCCACCCTGCCAAACCCTGTGGAGGAGAGCATCCTACAAGAAACTTCCAGCAGAAGGGGTaGCACATAGGTAATGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSNFHPAKPCGGEHPTRNFQQKG*HIGNAG Trigger: GCCGGCATTACCTATGTGCCACCCCTTCTGCTGGAA...GTTTCTTGTAGGATGCTCTCCTCCACAGGGTTTGGCAGGGTGGAAGTTGGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR CCA 90 bp | AGAGATTGCCCGAGGTACTGGGCTGAGCAGTTTGGGGGACCATATCTATCACCCGGAGTAAAGCACACCTaGCCACAAAAGTCCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RDCPRYWAEQFGGPYLSPGVKHT*PQKSSS Trigger: GCTGCTGGACTTTTGTGGCCAGGTGTGCTTTACTCC...GGGTGATAGATATGGTCCCCCAAACTGCTCAGCCCAGTACCTCGGGCAATCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGAGAATTGGGATTTGGTATGCTGTGGAGACCTTGGGTCCCAATCCTTGAGAAGGCTTGGCGGCAGTaGTCTGGGTCCCGGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KRELGFGMLWRPWVPILEKAWRQ*SGSRKR Trigger: CCTCTTCCGGGACCCAGACCACTGCCGCCAAGCCTT...CTCAAGGATTGGGACCCAAGGTCTCCACAGCATACCAAATCCCAATTCTCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS-3UTR CCA 90 bp | CATGCAAGAGCAACAGTGGCAGAATCTGGTCAAGGGACTTGGAGGGAAGTTTGTAGGGGGCCAGAACGCTaGTGTCCCAGTCAATGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HARATVAESGQGTWREVCRGPER*CPSQWQ Trigger: CTGCCATTGACTGGGACACCAGCGTTCTGGCCCCCT...ACAAACTTCCCTCCAAGTCCCTTGACCAGATTCTGCCACTGTTGCTCTTGCATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS-3UTR CCA 90 bp | TACAAGAAACTCCCATGCAAGAGCAACAGTGGCAGAATCTGGTCAAGGGACTTGTGCCTGGCTCGGCTCTaGGTACACCCTGGTACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: YKKLPCKSNSGRIWSRDLCLARL*VHPGTA Trigger: GGCTGTACCAGGGTGTACCCAGAGCCGAGCCAGGCA...CAAGTCCCTTGACCAGATTCTGCCACTGTTGCTCTTGCATGGGAGTTTCTTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR CCA 90 bp | CTGAAGCCAGAGCCCCGAAAGCTCTGGCTCCTATCTGTGCAACAATACACCTCAAGAAGACCAGGGAGATaGCACACTGCAGGAAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LKPEPRKLWLLSVQQYTSRRPGR*HTAGRA Trigger: GGCTCTTCCTGCAGTGTGCCATCTCCCTGGTCTTCT...TGAGGTGTATTGTTGCACAGATAGGAGCCAGAGCTTTCGGGGCTCTGGCTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR CCA 90 bp | GATAACATTATTGCAATCAGCACTGAAATCCCCCTCGACGTGATGAGCTCACTGCCCACAGAGTGCAGGTaGAGGGGCCAGGATGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: DNIIAISTEIPLDVMSSLPTECR*RGQDAA Trigger: AGCGGCATCCTGGCCCCTCCACCTGCACTCTGTGGG...CAGTGAGCTCATCACGTCGAGGGGGATTTCAGTGCTGATTGCAATAATGTTATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGTTTGTTCAGGTCCCCCAAATCCTCCCTCTGGTGACTTAAGCAGGAGGAGGCACTGTCCAGAATaGCCAGGTCCAGGCAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: REVCSGPPNPPSGDLSRRRHCPE*PGPGKC Trigger: GCATTTGCCTGGACCTGGCCATTCTGGACAGTGCCT...CCTCCTGCTTAAGTCACCAGAGGGAGGATTTGGGGGACCTGAACAAACTTCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR CCA 90 bp | AGCCAGACTCTGAAGCCAGAGCCCCGAAAGCTCTGGCTCCTATCTGTGCAACAAACAGAGTGGCTCAGCTaGACAATGGAGCCCATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SQTLKPEPRKLWLLSVQQTEWLS*TMEPMN Trigger: GTTCATGGGCTCCATTGTCCAGCTGAGCCACTCTGT...TTGTTGCACAGATAGGAGCCAGAGCTTTCGGGGCTCTGGCTTCAGAGTCTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| 3UTR CAA 72 bp | GCAGAAAGGCAGTGCTGTAGATCACGGGGTTTCATCTaGCCTGCTAGGGTTCCTCCTTCCAACTTCCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: AERQCCRSRGFI*PARVPPSNFHP Trigger: AGGGTGGAAGTTGGAAGGAGGAACCCTAGCAGGCAAGATGAAACCCCGTGATCTACAGCACTGCCTTTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| 3UTR CAA 72 bp | GATGAAGAGATTGCCCGAGGTACTGGGCTGAGCAGTTaGGGGGACCATATCTATCACCCCAGAAGAGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: DEEIARGTGLSS*GDHIYHPRRGV Trigger: GACTCCTCTTCTGGGGTGATAGATATGGTCCCCCAAACTGCTCAGCCCAGTACCTCGGGCAATCTCTTCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR TCA 90 bp | TACAAGAAACTCCCATGCAAGAGCAACAGTGGCAGAATCTGGTCAAGGGACTTGTTGACCAGCAGGAGCTaGGCTTTCCGGTGCCGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: YKKLPCKSNSGRIWSRDLLTSRS*AFRCRS Trigger: GCTACGGCACCGGAAAGCTCAGCTCCTGCTGGTCAA...CAAGTCCCTTGACCAGATTCTGCCACTGTTGCTCTTGCATGGGAGTTTCTTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGAGAATTGGGATTTGGTATGCTGTGGAGACCTTGGGTCCCAATCCTTGAGGGACAATGGAGCCCATaGACAGGGACGGAGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: KRELGFGMLWRPWVPILEGQWSP*TGTEPP Trigger: AGGTGGCTCCGTCCCTGTTCATGGGCTCCATTGTCC...CTCAAGGATTGGGACCCAAGGTCTCCACAGCATACCAAATCCCAATTCTCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR TCA 90 bp | CTGTGCAACAATACACCTCACTGCCTTAGGGTGGCAGCAGAGAGCCACTTAGGCATACCATATAGGCAGTaGCAGAGTGGCTCAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LCNNTPHCLRVAAESHLGIPYRQ*QSGSAG Trigger: TCCAGCTGAGCCACTCTGTCACTGCCTATATGGTAT...GCCTAAGTGGCTCTCTGCTGCCACCCTAAGGCAGTGAGGTGTATTGTTGCACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS-3UTR GCA 90 bp | ACATTTCAATCCCTGCAGAACTTCAGAATGACTTCCATGCGAGAGGCTGCCAGTAGGGAGATGGCACACTaGAGGAAGAGCCCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TFQSLQNFRMTSMREAASREMAH*RKSPRL Trigger: CAGCCTGGGGCTCTTCCTGCAGTGTGCCATCTCCCT...ACTGGCAGCCTCTCGCATGGAAGTCATTCTGAAGTTCTGCAGGGATTGAAATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS-3UTR CCA 90 bp | TCAGGTCCCCCAAATCCTCCCTCTGGTGACTTAAGCAGGAGGTTAGCTGTTAACTTCCAGCAGAAGGGGTaGCACATAGGTAATGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGPPNPPSGDLSRRLAVNFQQKG*HIGNAG Trigger: GCCGGCATTACCTATGTGCCACCCCTTCTGCTGGAA...GTTAACAGCTAACCTCCTGCTTAAGTCACCAGAGGGAGGATTTGGGGGACCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGTTTGTTCAGGTCCCCCAAATCCTCCCTCTGGTGACTTAAGCAGGAGGTGGTGTCCCAGTCAATaGCAGGTAAGAGGTAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: REVCSGPPNPPSGDLSRRWCPSQ*QVRGSP Trigger: TGGGCTACCTCTTACCTGCCATTGACTGGGACACCA...CCTCCTGCTTAAGTCACCAGAGGGAGGATTTGGGGGACCTGAACAAACTTCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCACCCTGCCAAACCCTGTGGAGGAGAGCATCCTACAAGAAACTCCCATGCGAAAGGTCATCACACTaGCCAGATAGACTGACCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPPCQTLWRRASYKKLPCERSSH*PDRLTV Trigger: CACGGTCAGTCTATCTGGCCAGTGTGATGACCTTTC...GCATGGGAGTTTCTTGTAGGATGCTCTCCTCCACAGGGTTTGGCAGGGTGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR CCA 90 bp | TTCCAACTTCCACCCTGCCAAACCCTGTGGAGGAGAGCATCCTACAAGAAACTCCGTCCCCTCGGTATTTaGGCAGGAACACCTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FQLPPCQTLWRRASYKKLRPLGI*AGTPAS Trigger: AGAAGCAGGTGTTCCTGCCCAAATACCGAGGGGACG...GAGTTTCTTGTAGGATGCTCTCCTCCACAGGGTTTGGCAGGGTGGAAGTTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCAGAATCTGGTCAAGGGACTTGGAGGGAAGTTTGTTCAGGTCCCCCAAATAGGCACTGTCCAGAATaGCCAGGTCCAGGCAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: VAESGQGTWREVCSGPPNRHCPE*PGPGKC Trigger: GCATTTGCCTGGACCTGGCCATTCTGGACAGTGCCT...ATTTGGGGGACCTGAACAAACTTCCCTCCAAGTCCCTTGACCAGATTCTGCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR CAA 72 bp | TGCAAGAGCAACAGTGGCAGAATCTGGTCAAGGGACTaGGAGGGAAGTTTGTTCAGGTCCCCCAAATCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CKSNSGRIWSRD*EGSLFRSPKSS Trigger: GGAGGATTTGGGGGACCTGAACAAACTTCCCTCCAAGTCCCTTGACCAGATTCTGCCACTGTTGCTCTTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS-3UTR TCA 90 bp | GTGGCAGAATCTGGTCAAGGGACTTGGAGGGAAGTTTGTTCAGGTCCCCCAAATCCAACACCATGGTCATaGATTTCTCCTCCACCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: VAESGQGTWREVCSGPPNPTPWS*ISPPPR Trigger: TCGGGGTGGAGGAGAAATTCATGACCATGGTGTTGG...ATTTGGGGGACCTGAACAAACTTCCCTCCAAGTCCCTTGACCAGATTCTGCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS-3UTR CCA 90 bp | ACATTTCAATCCCTGCAGAACTTCAGAATGACTTCCATGCGAGAGGCTGCCAGTAGCCCACGTGTCCATTaGGGAAGAGAGCTCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TFQSLQNFRMTSMREAASSPRVH*GRELLA Trigger: AGCCAGGAGCTCTCTTCCCCAATGGACACGTGGGCT...ACTGGCAGCCTCTCGCATGGAAGTCATTCTGAAGTTCTGCAGGGATTGAAATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS-3UTR TCA 90 bp | CATGCAAGAGCAACAGTGGCAGAATCTGGTCAAGGGACTTGGAGGGAAGTTTGTCCAACACCATGGTCATaGATTTCTCCTCCACCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: HARATVAESGQGTWREVCPTPWS*ISPPPR Trigger: TCGGGGTGGAGGAGAAATTCATGACCATGGTGTTGG...ACAAACTTCCCTCCAAGTCCCTTGACCAGATTCTGCCACTGTTGCTCTTGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS-3UTR CCA 90 bp | CATGCAAGAGCAACAGTGGCAGAATCTGGTCAAGGGACTTGGAGGGAAGTTTGTACAGAGTGGCTCAGCTaGACAATGGAGCCCATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HARATVAESGQGTWREVCTEWLS*TMEPMN Trigger: GTTCATGGGCTCCATTGTCCAGCTGAGCCACTCTGT...ACAAACTTCCCTCCAAGTCCCTTGACCAGATTCTGCCACTGTTGCTCTTGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS-3UTR TCA 90 bp | ATCCCACCCTACTCAACTCCTAGGCACAACATAAAAAGGCTGGGAATGAATTTTGTACCAGCCTGTCCATaGCCAGGGAGAAGACCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: IPPYSTPRHNIKRLGMNFVPACP*PGRRPG Trigger: CCCTGGTCTTCTCCCTGGTCATGGACAGGCTGGTAC...AAAATTCATTCCCAGCCTTTTTATGTTGTGCCTAGGAGTTGAGTAGGGTGGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS-3UTR TCA 90 bp | CATGCAAGAGCAACAGTGGCAGAATCTGGTCAAGGGACTTGGAGGGAAGTTTGTATACCATATAGGCAGTaGCAGAGTGGCTCAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HARATVAESGQGTWREVCIPYRQ*QSGSAG Trigger: TCCAGCTGAGCCACTCTGTCACTGCCTATATGGTAT...ACAAACTTCCCTCCAAGTCCCTTGACCAGATTCTGCCACTGTTGCTCTTGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS-3UTR CCA 90 bp | ACATTTCAATCCCTGCAGAACTTCAGAATGACTTCCATGCGAGAGGCTGCCAGTTGGTGTCCCAGTCAATaGCAGGTAAGAGGTAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TFQSLQNFRMTSMREAASWCPSQ*QVRGSP Trigger: TGGGCTACCTCTTACCTGCCATTGACTGGGACACCA...ACTGGCAGCCTCTCGCATGGAAGTCATTCTGAAGTTCTGCAGGGATTGAAATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS-3UTR CCA 90 bp | CATGCAAGAGCAACAGTGGCAGAATCTGGTCAAGGGACTTGGAGGGAAGTTTGTGAAAGGTCATCACACTaGCCAGATAGACTGACCGTG | + |
|
Preference number: 4 (lower is better) Translates to: HARATVAESGQGTWREVCERSSH*PDRLTV Trigger: CACGGTCAGTCTATCTGGCCAGTGTGATGACCTTTC...ACAAACTTCCCTCCAAGTCCCTTGACCAGATTCTGCCACTGTTGCTCTTGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| 3UTR CAA 72 bp | TCAGGGAACCAAACTGGGTCAAGAGAGAATTGGGATTaGGTATGCTGTGGAGACCTTGGGTCCCAATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SGNQTGSRENWD*VCCGDLGSQSL Trigger: CAAGGATTGGGACCCAAGGTCTCCACAGCATACCAAATCCCAATTCTCTCTTGACCCAGTTTGGTTCCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS-3UTR CCA 90 bp | ATCCCACCCTACTCAACTCCTAGGCACAACATAAAAAGGCTGGGAATGAATTTTGGCCTGGCAAGAAGCTaGTTGTCTGGCTGTCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: IPPYSTPRHNIKRLGMNFGLARS*LSGCPH Trigger: GTGAGGACAGCCAGACAACCAGCTTCTTGCCAGGCC...AAAATTCATTCCCAGCCTTTTTATGTTGTGCCTAGGAGTTGAGTAGGGTGGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| 3UTR CAA 72 bp | GATTTGGTATGCTGTGGAGACCTTGGGTCCCAATCCTaGAGCAGGAACATCTTATGGCTCTCAATTAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: DLVCCGDLGSQS*SRNILWLSIRM Trigger: CATCCTAATTGAGAGCCATAAGATGTTCCTGCTCAAGGATTGGGACCCAAGGTCTCCACAGCATACCAAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS GCA 90 bp | CACCACCACTCGCATGGAGACATCGCAGGCAGAGGCCCCACAGAGTaGAGGTGGAGGGGCCAGGATGCCGCTGCTGCCAGAGCCCACGTG | + |
|
Preference number: 5 (lower is better) Translates to: HHHSHGDIAGRGPTE*RWRGQDAAAARAHV Trigger: CACGTGGGCTCTGGCAGCAGCGGCATCCTGGCCCCTCCACCTGCACTCTGTGGGGCCTCTGCCTGCGATGTCTCCATGCGAGTGGTGGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS GCA 90 bp | GTGCCATCCAGCTGCACAGCTCAGCCACAAAGAGTCGGCGTAGGGTaGGAGGCATGCGGCAGCACAGCTGCTGCAGCCGGGGAAACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: VPSSCTAQPQRVGVG*EACGSTAAAAGETG Trigger: CCCTGTTTCCCCGGCTGCAGCAGCTGTGCTGCCGCATGCCTCGCACCCTACGCCGACTCTTTGTGGCTGAGCTGTGCAGCTGGATGGCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS TCA 90 bp | AGGCACACCTCCAGGCCAAAGGTGAGCAGGTTGACCAGCAGGAGCTaGGCTTTCCGGTGCCGTAGCAGACGGCTGGCCCACAGCCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RHTSRPKVSRLTSRS*AFRCRSRRLAHSLW Trigger: CCAGAGGCTGTGGGCCAGCCGTCTGCTACGGCACCGGAAAGCTCAGCTCCTGCTGGTCAACCTGCTCACCTTTGGCCTGGAGGTGTGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 ENSMUST00000190322.2 |
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| CDS GCA 90 bp | GCCACAAAGAGTCGGCGTAGGGTGCGAGGCATGCGGCAGCACAGCTaGTGCAGCCGGGGAAACAGGGTACCCAGATTCCGGAAAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ATKSRRRVRGMRQHS*CSRGNRVPRFRKAR Trigger: CCTGGCTTTCCGGAATCTGGGTACCCTGTTTCCCCGGCTGCAGCAGCTGTGCTGCCGCATGCCTCGCACCCTACGCCGACTCTTTGTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS GCA 90 bp | ACAAAGAGTCGGCGTAGGGTGCGAGGCATGCGGCAGCACAGCTGCTaGAGCCGGGGAAACAGGGTACCCAGATTCCGGAAAGCCAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TKSRRRVRGMRQHSC*SRGNRVPRFRKARP Trigger: TGGCCTGGCTTTCCGGAATCTGGGTACCCTGTTTCCCCGGCTGCAGCAGCTGTGCTGCCGCATGCCTCGCACCCTACGCCGACTCTTTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS GCA 90 bp | AGCTGCACAGCTCAGCCACAAAGAGTCGGCGTAGGGTGCGAGGCATaGGGCAGCACAGCTGCTGCAGCCGGGGAAACAGGGTACCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SCTAQPQRVGVGCEA*GSTAAAAGETGYPD Trigger: ATCTGGGTACCCTGTTTCCCCGGCTGCAGCAGCTGTGCTGCCGCATGCCTCGCACCCTACGCCGACTCTTTGTGGCTGAGCTGTGCAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS GCA 90 bp | GGCTGCCCATTCGAATGCCTTCATCATAGTGTCTCCGGGCCTCGGTaGCTGGCTCGGCTCTGGGTACACCCTGGTACAGCCCCTCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GCPFECLHHSVSGPR*LARLWVHPGTAPLP Trigger: TGGGAGAGGGGCTGTACCAGGGTGTACCCAGAGCCGAGCCAGGCACCGAGGCCCGGAGACACTATGATGAAGGCATTCGAATGGGCAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS CCA 90 bp | AGCCGGGGAAACAGGGTACCCAGATTCCGGAAAGCCAGGCCAACGTaGCATGGGCAGCATCGGCGCGACACGGCAGAGACCAACAACCCT | + |
|
Preference number: 5 (lower is better) Translates to: SRGNRVPRFRKARPT*HGQHRRDTAETNNP Trigger: AGGGTTGTTGGTCTCTGCCGTGTCGCGCCGATGCTGCCCATGCCACGTTGGCCTGGCTTTCCGGAATCTGGGTACCCTGTTTCCCCGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS CCA 90 bp | GTGAACCCGGTGAGGGCAGCTGAGGCTGTCACTACCACCACGCTGTaGGACAGGCAGGTGGCAGCGGCAGCCACAGGAAAGGTCATCACA | + |
|
Preference number: 5 (lower is better) Translates to: VNPVRAAEAVTTTTL*DRQVAAAATGKVIT Trigger: TGTGATGACCTTTCCTGTGGCTGCCGCTGCCACCTGCCTGTCCCACAGCGTGGTGGTAGTGACAGCCTCAGCTGCCCTCACCGGGTTCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS CCA 90 bp | GGGAAACAGGGTACCCAGATTCCGGAAAGCCAGGCCAACGTGGCATaGGCAGCATCGGCGCGACACGGCAGAGACCAACAACCCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GKQGTQIPESQANVA*AASARHGRDQQPFC Trigger: GCAGAAGGGTTGTTGGTCTCTGCCGTGTCGCGCCGATGCTGCCCATGCCACGTTGGCCTGGCTTTCCGGAATCTGGGTACCCTGTTTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS CCA 90 bp | TGCCTTCATCATAGTGTCTCCGGGCCTCGGTGCCTGGCTCGGCTCTaGGTACACCCTGGTACAGCCCCTCTCCCACGAAGTCCGTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: CLHHSVSGPRCLARL*VHPGTAPLPRSPCR Trigger: TCTACACGGACTTCGTGGGAGAGGGGCTGTACCAGGGTGTACCCAGAGCCGAGCCAGGCACCGAGGCCCGGAGACACTATGATGAAGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
||
| CDS CCA 90 bp | GCCCATTCGAATGCCTTCATCATAGTGTCTCCGGGCCTCGGTGCCTaGCTCGGCTCTGGGTACACCCTGGTACAGCCCCTCTCCCACGAA | + |
|
Preference number: 5 (lower is better) Translates to: AHSNAFIIVSPGLGA*LGSGYTLVQPLSHE Trigger: TTCGTGGGAGAGGGGCTGTACCAGGGTGTACCCAGAGCCGAGCCAGGCACCGAGGCCCGGAGACACTATGATGAAGGCATTCGAATGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS CCA 90 bp | AGAGCCCACGTGTCCATTGGGGAAGAGAGCTCCTGGCTTAGGGCCTaGCAAGAAGCTGGTTGTCTGGCTGTCCTCACCGCTGCTACCTCC | + |
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Preference number: 5 (lower is better) Translates to: RAHVSIGEESSWLRA*QEAGCLAVLTAATS Trigger: GGAGGTAGCAGCGGTGAGGACAGCCAGACAACCAGCTTCTTGCCAGGCCCTAAGCCAGGAGCTCTCTTCCCCAATGGACACGTGGGCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS CCA 90 bp | CAAAGAGGCATTCTTCCTGAGTACCCAGGTAGGGGGCCAGAACGCTaGTGTCCCAGTCAATGGCAGGTAAGAGGTAGCCCAGGCAGCCCC | + |
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Preference number: 5 (lower is better) Translates to: QRGILPEYPGRGPER*CPSQWQVRGSPGSP Trigger: GGGGCTGCCTGGGCTACCTCTTACCTGCCATTGACTGGGACACCAGCGTTCTGGCCCCCTACCTGGGTACTCAGGAAGAATGCCTCTTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 ENSMUST00000190322.2 |
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| CDS CCA 90 bp | GGGACAGGCAGGTGGCAGCGGCAGCCACAGGAAAGGTCATCACACTaGCCAGATAGACTGACCGTGTGCCGAACTTCTGTACCAGCCTGT | + |
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Preference number: 5 (lower is better) Translates to: GTGRWQRQPQERSSH*PDRLTVCRTSVPAC Trigger: ACAGGCTGGTACAGAAGTTCGGCACACGGTCAGTCTATCTGGCCAGTGTGATGACCTTTCCTGTGGCTGCCGCTGCCACCTGCCTGTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS CCA 90 bp | TGGCTCAGCTGGACAATGGAGCCCATGAACAGGGACGGAGCCACCTaGGACAGCAGAAAGGCACTGTCCAGAATGGCCAGGTCCAGGCAA | + |
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Preference number: 5 (lower is better) Translates to: WLSWTMEPMNRDGAT*DSRKALSRMARSRQ Trigger: TTGCCTGGACCTGGCCATTCTGGACAGTGCCTTTCTGCTGTCCCAGGTGGCTCCGTCCCTGTTCATGGGCTCCATTGTCCAGCTGAGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS TCA 90 bp | GGCAGCGGCAGCCACAGGAAAGGTCATCACACTGGCCAGATAGACTaGCCGTGTGCCGAACTTCTGTACCAGCCTGTCCATGACCAGGGA | + |
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Preference number: 5 (lower is better) Translates to: GSGSHRKGHHTGQID*PCAELLYQPVHDQG Trigger: TCCCTGGTCATGGACAGGCTGGTACAGAAGTTCGGCACACGGTCAGTCTATCTGGCCAGTGTGATGACCTTTCCTGTGGCTGCCGCTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS CCA 90 bp | CGGAAGAGGTCGGAGAGTAAGGCCTCCAATGGAGTAAAGCACACCTaGCCACAAAAGTCCAGCAGCCCCACTCCCAAGATCAGCAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: RKRSESKASNGVKHT*PQKSSSPTPKISRA Trigger: GGCCCTGCTGATCTTGGGAGTGGGGCTGCTGGACTTTTGTGGCCAGGTGTGCTTTACTCCATTGGAGGCCTTACTCTCCGACCTCTTCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 ENSMUST00000190322.2 |
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| CDS-3UTR CAA 90 bp | AGAGATTGCCCGAGGTACTGGGCTGAGCAGTTTGGGGGACCATATCTATCACCCGAGCCCACGTGTCCATaGGGGAAGAGAGCTCCTGGC | + |
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Preference number: 5 (lower is better) Translates to: RDCPRYWAEQFGGPYLSPEPTCP*GKRAPG Trigger: GCCAGGAGCTCTCTTCCCCAATGGACACGTGGGCTC...GGGTGATAGATATGGTCCCCCAAACTGCTCAGCCCAGTACCTCGGGCAATCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS TCA 90 bp | CCAGATAGACTGACCGTGTGCCGAACTTCTGTACCAGCCTGTCCATaGCCAGGGAGAAGACCAGGGAGATGGCACACTGCAGGAAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: PDRLTVCRTSVPACP*PGRRPGRWHTAGRA Trigger: GGCTCTTCCTGCAGTGTGCCATCTCCCTGGTCTTCTCCCTGGTCATGGACAGGCTGGTACAGAAGTTCGGCACACGGTCAGTCTATCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS CCA 90 bp | CATGGTCATGAATTTCTCCTCCACCCCGACTTCCAGCAGAAGGGGTaGCACATAGGTAATGCCGGCAGCCAGGCACACCTCCAGGCCAAA | + |
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Preference number: 5 (lower is better) Translates to: HGHEFLLHPDFQQKG*HIGNAGSQAHLQAK Trigger: TTTGGCCTGGAGGTGTGCCTGGCTGCCGGCATTACCTATGTGCCACCCCTTCTGCTGGAAGTCGGGGTGGAGGAGAAATTCATGACCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 ENSMUST00000190322.2 |
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| CDS-3UTR CAA 90 bp | AGAGATTGCCCGAGGTACTGGGCTGAGCAGTTTGGGGGACCATATCTATCACCCGTAGACAGAGAAGGCTaGGCGGCAGTGGTCTGGGTC | + |
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Preference number: 5 (lower is better) Translates to: RDCPRYWAEQFGGPYLSPVDREG*AAVVWV Trigger: GACCCAGACCACTGCCGCCAAGCCTTCTCTGTCTAC...GGGTGATAGATATGGTCCCCCAAACTGCTCAGCCCAGTACCTCGGGCAATCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS TCA 90 bp | CAGAAACCAGGCCTAGCACTGGGCCAATGCCCAACACCATGGTCATaGATTTCTCCTCCACCCCGACTTCCAGCAGAAGGGGTGGCACAT | + |
|
Preference number: 5 (lower is better) Translates to: QKPGLALGQCPTPWS*ISPPPRLPAEGVAH Trigger: ATGTGCCACCCCTTCTGCTGGAAGTCGGGGTGGAGGAGAAATTCATGACCATGGTGTTGGGCATTGGCCCAGTGCTAGGCCTGGTTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS-3UTR CAA 90 bp | AGGGAAGTTTGTTCAGGTCCCCCAAATCCTCCCTCTGGTGACTTAAGCAGGAGGGTAGACAGAGAAGGCTaGGCGGCAGTGGTCTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: REVCSGPPNPPSGDLSRRVDREG*AAVVWV Trigger: GACCCAGACCACTGCCGCCAAGCCTTCTCTGTCTAC...CCTCCTGCTTAAGTCACCAGAGGGAGGATTTGGGGGACCTGAACAAACTTCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS-3UTR CAA 90 bp | TTCCAACTTCCACCCTGCCAAACCCTGTGGAGGAGAGCATCCTACAAGAAACTCGAGCCCACGTGTCCATaGGGGAAGAGAGCTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FQLPPCQTLWRRASYKKLEPTCP*GKRAPG Trigger: GCCAGGAGCTCTCTTCCCCAATGGACACGTGGGCTC...GAGTTTCTTGTAGGATGCTCTCCTCCACAGGGTTTGGCAGGGTGGAAGTTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS-3UTR CAA 90 bp | CATGCAAGAGCAACAGTGGCAGAATCTGGTCAAGGGACTTGGAGGGAAGTTTGTCTGGCAAGAAGCTGGTaGTCTGGCTGTCCTCACCGC | + |
|
Preference number: 5 (lower is better) Translates to: HARATVAESGQGTWREVCLARSW*SGCPHR Trigger: GCGGTGAGGACAGCCAGACAACCAGCTTCTTGCCAG...ACAAACTTCCCTCCAAGTCCCTTGACCAGATTCTGCCACTGTTGCTCTTGCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS-3UTR CAA 90 bp | AAGAGAGAATTGGGATTTGGTATGCTGTGGAGACCTTGGGTCCCAATCCTTGAGGCGTCCCCTCGGTATTaGGGCAGGAACACCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KRELGFGMLWRPWVPILEASPRY*GRNTCF Trigger: GAAGCAGGTGTTCCTGCCCAAATACCGAGGGGACGC...CTCAAGGATTGGGACCCAAGGTCTCCACAGCATACCAAATCCCAATTCTCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS-3UTR CAA 90 bp | TACAAGAAACTCCCATGCAAGAGCAACAGTGGCAGAATCTGGTCAAGGGACTTGCTGGCAAGAAGCTGGTaGTCTGGCTGTCCTCACCGC | + |
|
Preference number: 5 (lower is better) Translates to: YKKLPCKSNSGRIWSRDLLARSW*SGCPHR Trigger: GCGGTGAGGACAGCCAGACAACCAGCTTCTTGCCAG...CAAGTCCCTTGACCAGATTCTGCCACTGTTGCTCTTGCATGGGAGTTTCTTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS TCA 90 bp | TACCTGTGTAGCAAAGTAAATGGCGACCAGACCCAAGCCTGCAGCTaGTACCATATAGGCAGTGACAGAGTGGCTCAGCTGGACAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: YLCSKVNGDQTQACS*YHIGSDRVAQLDNG Trigger: TCCATTGTCCAGCTGAGCCACTCTGTCACTGCCTATATGGTATCAGCTGCAGGCTTGGGTCTGGTCGCCATTTACTTTGCTACACAGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS-3UTR CAA 90 bp | ACAGTCCTTTCCCATAGGGAGAAGTGGGCAATCAGGGAACCAAACTGGGTCAAGTTGGCCAAGTCGTTCTaGTCAAACACTACCTGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: TVLSHREKWAIREPNWVKLAKSF*SNTTCV Trigger: TACACAGGTAGTGTTTGACAAGAACGACTTGGCCAA...CTTGACCCAGTTTGGTTCCCTGATTGCCCACTTCTCCCTATGGGAAAGGACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS-3UTR CAA 90 bp | ATCCCACCCTACTCAACTCCTAGGCACAACATAAAAAGGCTGGGAATGAATTTTTTGGCCAAGTCGTTCTaGTCAAACACTACCTGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: IPPYSTPRHNIKRLGMNFLAKSF*SNTTCV Trigger: TACACAGGTAGTGTTTGACAAGAACGACTTGGCCAA...AAAATTCATTCCCAGCCTTTTTATGTTGTGCCTAGGAGTTGAGTAGGGTGGGAT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS GCA 72 bp | GCTCAGCCACAAAGAGTCGGCGTAGGGTGCGAGGCATaGGGCAGCACAGCTGCTGCAGCCGGGGAAACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: AQPQRVGVGCEA*GSTAAAAGETG Trigger: CCCTGTTTCCCCGGCTGCAGCAGCTGTGCTGCCGCATGCCTCGCACCCTACGCCGACTCTTTGTGGCTGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS CCA 72 bp | CCCTGGCCTCAGGTGGCTCACCCACCACCACTCGCATaGAGACATCGCAGGCAGAGGCCCCACAGAGTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PWPQVAHPPPLA*RHRRQRPHRVQ Trigger: CTGCACTCTGTGGGGCCTCTGCCTGCGATGTCTCCATGCGAGTGGTGGTGGGTGAGCCACCTGAGGCCAGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS CCA 72 bp | CCAGGTAGGGGGCCAGAACGCTGGTGTCCCAGTCAATaGCAGGTAAGAGGTAGCCCAGGCAGCCCCCAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PGRGPERWCPSQ*QVRGSPGSPQG Trigger: GCCTTGGGGGCTGCCTGGGCTACCTCTTACCTGCCATTGACTGGGACACCAGCGTTCTGGCCCCCTACCTGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 ENSMUST00000190322.2 |
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| CDS CCA 72 bp | CATAGTGTCTCCGGGCCTCGGTGCCTGGCTCGGCTCTaGGTACACCCTGGTACAGCCCCTCTCCCACGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: HSVSGPRCLARL*VHPGTAPLPRS Trigger: ACTTCGTGGGAGAGGGGCTGTACCAGGGTGTACCCAGAGCCGAGCCAGGCACCGAGGCCCGGAGACACTATG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS CCA 72 bp | GTGAGGGCAGCTGAGGCTGTCACTACCACCACGCTGTaGGACAGGCAGGTGGCAGCGGCAGCCACAGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: VRAAEAVTTTTL*DRQVAAAATGK Trigger: CTTTCCTGTGGCTGCCGCTGCCACCTGCCTGTCCCACAGCGTGGTGGTAGTGACAGCCTCAGCTGCCCTCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS CAA 72 bp | GCCAGGATGCCGCTGCTGCCAGAGCCCACGTGTCCATaGGGGAAGAGAGCTCCTGGCTTAGGGCCTGGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: ARMPLLPEPTCP*GKRAPGLGPGK Trigger: CTTGCCAGGCCCTAAGCCAGGAGCTCTCTTCCCCAATGGACACGTGGGCTCTGGCAGCAGCGGCATCCTGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS CAA 90 bp | GGTGGAGGGGCCAGGATGCCGCTGCTGCCAGAGCCCACGTGTCCATaGGGGAAGAGAGCTCCTGGCTTAGGGCCTGGCAAGAAGCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: GGGARMPLLPEPTCP*GKRAPGLGPGKKLV Trigger: AACCAGCTTCTTGCCAGGCCCTAAGCCAGGAGCTCTCTTCCCCAATGGACACGTGGGCTCTGGCAGCAGCGGCATCCTGGCCCCTCCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS TCA 72 bp | TCCAGGCCAAAGGTGAGCAGGTTGACCAGCAGGAGCTaGGCTTTCCGGTGCCGTAGCAGACGGCTGGCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SRPKVSRLTSRS*AFRCRSRRLAH Trigger: GTGGGCCAGCCGTCTGCTACGGCACCGGAAAGCTCAGCTCCTGCTGGTCAACCTGCTCACCTTTGGCCTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 ENSMUST00000190322.2 |
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| CDS GCA 72 bp | CAACTCCAGGGGCCTGGTGTCTGGGTACAGCAGTCCTaGCAGCCAGCCAGCCCTCGGGATGAGAAAGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: QLQGPGVWVQQS*QPASPRDEKEA Trigger: AGCCTCTTTCTCATCCCGAGGGCTGGCTGGCTGGCAGGACTGCTGTACCCAGACACCAGGCCCCTGGAGTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 ENSMUST00000190322.2 |
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| CDS CCA 72 bp | GTCTCCGGCGGCCATAGCGCCCACGCCACTGGTCACTaGCTGAGCCTAGGAGTGGAACAGAAACCAGGCCTA | + |
|
Preference number: 6 (lower is better) Translates to: VSGGHSAHATGH*LSLGVEQKPGL Trigger: TAGGCCTGGTTTCTGTTCCACTCCTAGGCTCAGCCAGTGACCAGTGGCGTGGGCGCTATGGCCGCCGGAGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS CCA 72 bp | AACAGGGTACCCAGATTCCGGAAAGCCAGGCCAACGTaGCATGGGCAGCATCGGCGCGACACGGCAGAGACC | + |
|
Preference number: 6 (lower is better) Translates to: NRVPRFRKARPT*HGQHRRDTAET Trigger: GGTCTCTGCCGTGTCGCGCCGATGCTGCCCATGCCACGTTGGCCTGGCTTTCCGGAATCTGGGTACCCTGTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS CCA 72 bp | CACGGCAGAGACCAACAACCCTTCTGCCGGCTCGGGTaGGCCCAGTACTGCCTCCTCCGTCACAAACAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: HGRDQQPFCRLG*AQYCLLRHKQS Trigger: ACTCTGTTTGTGACGGAGGAGGCAGTACTGGGCCCACCCGAGCCGGCAGAAGGGTTGTTGGTCTCTGCCGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS CCA 72 bp | GGTACCCAGATTCCGGAAAGCCAGGCCAACGTGGCATaGGCAGCATCGGCGCGACACGGCAGAGACCAACAA | + |
|
Preference number: 6 (lower is better) Translates to: GTQIPESQANVA*AASARHGRDQQ Trigger: TTGTTGGTCTCTGCCGTGTCGCGCCGATGCTGCCCATGCCACGTTGGCCTGGCTTTCCGGAATCTGGGTACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS CCA 72 bp | AATGCCTTCATCATAGTGTCTCCGGGCCTCGGTGCCTaGCTCGGCTCTGGGTACACCCTGGTACAGCCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: NAFIIVSPGLGA*LGSGYTLVQPL Trigger: GAGGGGCTGTACCAGGGTGTACCCAGAGCCGAGCCAGGCACCGAGGCCCGGAGACACTATGATGAAGGCATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS CCA 72 bp | CCTCACCGCTGCTACCTCCAGCGTCCCCTCGGTATTTaGGCAGGAACACCTGCTTCTCACGGTGGTAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PHRCYLQRPLGI*AGTPASHGGRG Trigger: CCCTCTACCACCGTGAGAAGCAGGTGTTCCTGCCCAAATACCGAGGGGACGCTGGAGGTAGCAGCGGTGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS TCA 72 bp | GGTACAGCAGTCCTGCCAGCCAGCCAGCCCTCGGGATaGGAAAGAGGCTTAGCAGGACACCCAGGGACAAAG | + |
|
Preference number: 6 (lower is better) Translates to: GTAVLPASQPSG*ERGLAGHPGTK Trigger: CTTTGTCCCTGGGTGTCCTGCTAAGCCTCTTTCTCATCCCGAGGGCTGGCTGGCTGGCAGGACTGCTGTACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 ENSMUST00000190322.2 |
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| CDS GCA 72 bp | TTCGAATGCCTTCATCATAGTGTCTCCGGGCCTCGGTaGCTGGCTCGGCTCTGGGTACACCCTGGTACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: FECLHHSVSGPR*LARLWVHPGTA Trigger: GGCTGTACCAGGGTGTACCCAGAGCCGAGCCAGGCACCGAGGCCCGGAGACACTATGATGAAGGCATTCGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS GCA 72 bp | CTGGCAAGAAGCTGGTTGTCTGGCTGTCCTCACCGCTaGTACCTCCAGCGTCCCCTCGGTATTTGGGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LARSWLSGCPHR*YLQRPLGIWAG Trigger: TCCTGCCCAAATACCGAGGGGACGCTGGAGGTAGCAGCGGTGAGGACAGCCAGACAACCAGCTTCTTGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS CCA 72 bp | GTGTCCATTGGGGAAGAGAGCTCCTGGCTTAGGGCCTaGCAAGAAGCTGGTTGTCTGGCTGTCCTCACCGCT | + |
|
Preference number: 6 (lower is better) Translates to: VSIGEESSWLRA*QEAGCLAVLTA Trigger: AGCGGTGAGGACAGCCAGACAACCAGCTTCTTGCCAGGCCCTAAGCCAGGAGCTCTCTTCCCCAATGGACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS TCA 72 bp | GGCCTAGCACTGGGCCAATGCCCAACACCATGGTCATaGATTTCTCCTCCACCCCGACTTCCAGCAGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GLALGQCPTPWS*ISPPPRLPAEG Trigger: CCCTTCTGCTGGAAGTCGGGGTGGAGGAGAAATTCATGACCATGGTGTTGGGCATTGGCCCAGTGCTAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS TCA 72 bp | CTGACCGTGTGCCGAACTTCTGTACCAGCCTGTCCATaGCCAGGGAGAAGACCAGGGAGATGGCACACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LTVCRTSVPACP*PGRRPGRWHTA Trigger: TGCAGTGTGCCATCTCCCTGGTCTTCTCCCTGGTCATGGACAGGCTGGTACAGAAGTTCGGCACACGGTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS TCA 72 bp | GCCACTGGTCACTGGCTGAGCCCAACACCATGGTCATaGATTTCTCCTCCACCCCGACTTCCAGCAGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: ATGHWLSPTPWS*ISPPPRLPAEG Trigger: CCCTTCTGCTGGAAGTCGGGGTGGAGGAGAAATTCATGACCATGGTGTTGGGCTCAGCCAGTGACCAGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190322.2 |
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| CDS CCA 72 bp | ATTCTTCCTGAGTACCCAGGTAGGGGGCCAGAACGCTaGTGTCCCAGTCAATGGCAGGTAAGAGGTAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: ILPEYPGRGPER*CPSQWQVRGSP Trigger: TGGGCTACCTCTTACCTGCCATTGACTGGGACACCAGCGTTCTGGCCCCCTACCTGGGTACTCAGGAAGAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 ENSMUST00000190322.2 |
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| CDS CCA 72 bp | AGGTGGCAGCGGCAGCCACAGGAAAGGTCATCACACTaGCCAGATAGACTGACCGTGTGCCGAACTTCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: RWQRQPQERSSH*PDRLTVCRTSV Trigger: TACAGAAGTTCGGCACACGGTCAGTCTATCTGGCCAGTGTGATGACCTTTCCTGTGGCTGCCGCTGCCACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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| CDS CCA 72 bp | TCGGAGAGTAAGGCCTCCAATGGAGTAAAGCACACCTaGCCACAAAAGTCCAGCAGCCCCACTCCCAAGATC | + |
|
Preference number: 6 (lower is better) Translates to: SESKASNGVKHT*PQKSSSPTPKI Trigger: GATCTTGGGAGTGGGGCTGCTGGACTTTTGTGGCCAGGTGTGCTTTACTCCATTGGAGGCCTTACTCTCCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 ENSMUST00000190322.2 |
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| CDS TCA 72 bp | AGCCACAGGAAAGGTCATCACACTGGCCAGATAGACTaGCCGTGTGCCGAACTTCTGTACCAGCCTGTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SHRKGHHTGQID*PCAELLYQPVH Trigger: ATGGACAGGCTGGTACAGAAGTTCGGCACACGGTCAGTCTATCTGGCCAGTGTGATGACCTTTCCTGTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027695.8 ENSMUST00000177943.8 |
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