Pregenerated sensors for SLC45A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022243Ensembl transcript IDs: ENSMUST00000117100.4
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCTCAGGCACATCTGGAGTCATACAGATGGCACTTAACCAAGGCTaGAGAAAACCTAAGGAGAGAGGGCTGGTGATGGGGTTTGCCAGC | + |
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Preference number: 1 (lower is better) Translates to: GSGTSGVIQMALNQG*RKPKERGLVMGFAS Trigger: GCTGGCAAACCCCATCACCAGCCCTCTCTCCTTAGGTTTTCTGCAGCCTTGGTTAAGTGCCATCTGTATGACTCCAGATGTGCCTGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| 3UTR CCA 90 bp | CCAGCCTATGCTTGCCCTCCACGGGAAGCAGTAGAGCCAAAGCCCTaGATTGAAAGCCCAGCTTTGCCACATATGACTTGTGTGGCTTCA | + |
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Preference number: 1 (lower is better) Translates to: PAYACPPREAVEPKP*IESPALPHMTCVAS Trigger: TGAAGCCACACAAGTCATATGTGGCAAAGCTGGGCTTTCAATCCAGGGCTTTGGCTCTACTGCTTCCCGTGGAGGGCAAGCATAGGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| 3UTR TCA 90 bp | CTATGCTTGCCCTCCACGGGAAGCAGTAGAGCCAAAGCCCTGGATTaGAAGCCCAGCTTTGCCACATATGACTTGTGTGGCTTCAGTGAG | + |
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Preference number: 1 (lower is better) Translates to: LCLPSTGSSRAKALD*KPSFATYDLCGFSE Trigger: CTCACTGAAGCCACACAAGTCATATGTGGCAAAGCTGGGCTTTCAATCCAGGGCTTTGGCTCTACTGCTTCCCGTGGAGGGCAAGCATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| 3UTR GCA 90 bp | GGTAAGGGGAAGCACTTCACAAGCATTGTAAACTCACGGTCTCGATaGTCTGAGAATGGAATTCCTCATACTAGCGTACACACAAGCATG | + |
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Preference number: 1 (lower is better) Translates to: GKGKHFTSIVNSRSR*SENGIPHTSVHTSM Trigger: CATGCTTGTGTGTACGCTAGTATGAGGAATTCCATTCTCAGAGCATCGAGACCGTGAGTTTACAATGCTTGTGAAGTGCTTCCCCTTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| 3UTR CAA 90 bp | CCACGGGAAGCAGTAGAGCCAAAGCCCTGGATTGAAAGCCCAGCTTaGCCACATATGACTTGTGTGGCTTCAGTGAGGCACCTAATGGAG | + |
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Preference number: 2 (lower is better) Translates to: PREAVEPKPWIESPA*PHMTCVASVRHLME Trigger: CTCCATTAGGTGCCTCACTGAAGCCACACAAGTCATATGTGGCAAAGCTGGGCTTTCAATCCAGGGCTTTGGCTCTACTGCTTCCCGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| 3UTR-3UTR TCA 90 bp | CCAGCCTATGCTTGCCCTCCACGGGAAGCAGTAGAGCCAAAGCCCTGGATTGAATGGGCTTCTTTTGTCTaGGGTTTGGTGGGTGTCTTT | + |
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Preference number: 2 (lower is better) Translates to: PAYACPPREAVEPKPWIEWASFV*GLVGVF Trigger: AAAGACACCCACCAAACCTCAGACAAAAGAAGCCCA...TTCAATCCAGGGCTTTGGCTCTACTGCTTCCCGTGGAGGGCAAGCATAGGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| 3UTR CAA 90 bp | ACAGAGGTTCAAAACACAGCCAGGCTCCAAAGCCCACTGCTGGTTTaGTTATTAAGTGATGTGGTCTCTCAGCATGGGTTCAGTACAGTC | + |
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Preference number: 2 (lower is better) Translates to: TEVQNTARLQSPLLV*LLSDVVSQHGFSTV Trigger: GACTGTACTGAACCCATGCTGAGAGACCACATCACTTAATAACAAAACCAGCAGTGGGCTTTGGAGCCTGGCTGTGTTTTGAACCTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| 3UTR-3UTR CCA 90 bp | CTGAGTACCAAACAGAGGTTCAAAACACAGCCAGGCTCCAAAGCCCACTGCTGGCTTTTGTCTGAGGTTTaGTGGGTGTCTTTTTATGAA | + |
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Preference number: 2 (lower is better) Translates to: LSTKQRFKTQPGSKAHCWLLSEV*WVSFYE Trigger: TTCATAAAAAGACACCCACCAAACCTCAGACAAAAG...CCAGCAGTGGGCTTTGGAGCCTGGCTGTGTTTTGAACCTCTGTTTGGTACTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| 3UTR-3UTR TCA 90 bp | CTAAGACTTTGCGGTAAGGGGAAGCACTTCACAAGCATTGTAAACTCACGGTCTGACATGATGGAGGCTTaGAATTCTCTTGAGAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: LRLCGKGKHFTSIVNSRSDMMEA*NSLEKQ Trigger: CTGCTTCTCAAGAGAATTTCAAGCCTCCATCATGTC...AGACCGTGAGTTTACAATGCTTGTGAAGTGCTTCCCCTTACCGCAAAGTCTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| 3UTR-3UTR TCA 90 bp | AACAGAGGTTCAAAACACAGCCAGGCTCCAAAGCCCACTGCTGGTTTTGTTATTGGCTTGAAATTCTCTTaGGAAGCAGAACTTGACTCT | + |
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Preference number: 2 (lower is better) Translates to: NRGSKHSQAPKPTAGFVIGLKFS*EAELDS Trigger: AGAGTCAAGTTCTGCTTCTCAAGAGAATTTCAAGCC...AATAACAAAACCAGCAGTGGGCTTTGGAGCCTGGCTGTGTTTTGAACCTCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| 3UTR-3UTR GCA 90 bp | TTATTTATAAGCATTACAGGTAAGATGCATTTGTTCCTAAGACATGATGGAGGCATGTGCAAGGCGCAGTaGCAGCATGAGGCATACAGT | + |
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Preference number: 2 (lower is better) Translates to: LFISITGKMHLFLRHDGGMCKAQ*QHEAYS Trigger: ACTGTATGCCTCATGCTGGCACTGCGCCTTGCACAT...GCCTCCATCATGTCTTAGGAACAAATGCATCTTACCTGTAATGCTTATAAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| 3UTR CAA 90 bp | ACTTTTAAGTTGCTGTGCTTTCGGAATGAGACCTCCAACGCAGGCTaGTTCAGAATGTCATACATTAGACGGGAATTAATTATGAGCAAA | + |
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Preference number: 2 (lower is better) Translates to: TFKLLCFRNETSNAG*FRMSYIRRELIMSK Trigger: TTTGCTCATAATTAATTCCCGTCTAATGTATGACATTCTGAACAAGCCTGCGTTGGAGGTCTCATTCCGAAAGCACAGCAACTTAAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| 3UTR-3UTR TCA 90 bp | GAGTGGAAACCCATAGCTTTATCTTTTACATCTGAAGGCACATGGACAAATTTCCCCAGAATCGCTTCTTaGAATTGTCAATTTCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: EWKPIALSFTSEGTWTNFPRIAS*NCQFQS Trigger: GCTCTGAAATTGACAATTTCAAGAAGCGATTCTGGG...GAAATTTGTCCATGTGCCTTCAGATGTAAAAGATAAAGCTATGGGTTTCCACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| 3UTR GCA 72 bp | AGCGGGCAATCCCACCACACCTTCCCCACATGTATGTaGAAGGCGCAGTGCCAGCATGAGGCATACAGTCCC | + |
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Preference number: 3 (lower is better) Translates to: SGQSHHTFPTCM*KAQCQHEAYSP Trigger: GGGACTGTATGCCTCATGCTGGCACTGCGCCTTGCACATACATGTGGGGAAGGTGTGGTGGGATTGCCCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| 3UTR TCA 72 bp | CTTCCCCACATGTATGTGCAAGGCGCAGTGCCAGCATaGGGCATACAGTCCCCAACAACACCGAAGAGTCCG | + |
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Preference number: 3 (lower is better) Translates to: LPHMYVQGAVPA*GIQSPTTPKSP Trigger: CGGACTCTTCGGTGTTGTTGGGGACTGTATGCCTCATGCTGGCACTGCGCCTTGCACATACATGTGGGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| 3UTR GCA 72 bp | CACCACACCTTCCCCACATGTATGTGCAAGGCGCAGTaGCAGCATGAGGCATACAGTCCCCAACAACACCGA | + |
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Preference number: 3 (lower is better) Translates to: HHTFPTCMCKAQ*QHEAYSPQQHR Trigger: TCGGTGTTGTTGGGGACTGTATGCCTCATGCTGGCACTGCGCCTTGCACATACATGTGGGGAAGGTGTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| 3UTR TCA 72 bp | CCCTCCACGGGAAGCAGTAGAGCCAAAGCCCTGGATTaGAAGCCCAGCTTTGCCACATATGACTTGTGTGGC | + |
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Preference number: 3 (lower is better) Translates to: PSTGSSRAKALD*KPSFATYDLCG Trigger: GCCACACAAGTCATATGTGGCAAAGCTGGGCTTTCAATCCAGGGCTTTGGCTCTACTGCTTCCCGTGGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| 3UTR CCA 72 bp | GCTTGCCCTCCACGGGAAGCAGTAGAGCCAAAGCCCTaGATTGAAAGCCCAGCTTTGCCACATATGACTTGT | + |
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Preference number: 3 (lower is better) Translates to: ACPPREAVEPKP*IESPALPHMTC Trigger: ACAAGTCATATGTGGCAAAGCTGGGCTTTCAATCCAGGGCTTTGGCTCTACTGCTTCCCGTGGAGGGCAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| 3UTR-3UTR CAA 90 bp | CCAGCCTATGCTTGCCCTCCACGGGAAGCAGTAGAGCCAAAGCCCTGGATTGAAACCTCCAACGCAGGCTaGTTCAGAATGTCATACATT | + |
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Preference number: 3 (lower is better) Translates to: PAYACPPREAVEPKPWIETSNAG*FRMSYI Trigger: AATGTATGACATTCTGAACAAGCCTGCGTTGGAGGT...TTCAATCCAGGGCTTTGGCTCTACTGCTTCCCGTGGAGGGCAAGCATAGGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| 3UTR-3UTR CAA 90 bp | CTGCATGGCTCAGGCACATCTGGAGTCATACAGATGGCACTTAACCAAGGCTGCGCACCTAATGGAGCTTaGCTCTGGTTCCCTCATGTA | + |
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Preference number: 3 (lower is better) Translates to: LHGSGTSGVIQMALNQGCAPNGA*LWFPHV Trigger: TACATGAGGGAACCAGAGCAAAGCTCCATTAGGTGC...GCAGCCTTGGTTAAGTGCCATCTGTATGACTCCAGATGTGCCTGAGCCATGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| 3UTR-3UTR CAA 90 bp | CCAGCCTATGCTTGCCCTCCACGGGAAGCAGTAGAGCCAAAGCCCTGGATTGAACCCCAGAATCGCTTCTaGAAATTGTCAATTTCAGAG | + |
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Preference number: 3 (lower is better) Translates to: PAYACPPREAVEPKPWIEPQNRF*KLSISE Trigger: CTCTGAAATTGACAATTTCAAGAAGCGATTCTGGGG...TTCAATCCAGGGCTTTGGCTCTACTGCTTCCCGTGGAGGGCAAGCATAGGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| 3UTR TCA 72 bp | ACCAAGGCTGCAGAAAACCTAAGGAGAGAGGGCTGGTaGTGGGGTTTGCCAGCAATGACCATGACATTCATT | + |
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Preference number: 3 (lower is better) Translates to: TKAAENLRREGW*WGLPAMTMTFI Trigger: AATGAATGTCATGGTCATTGCTGGCAAACCCCATCACCAGCCCTCTCTCCTTAGGTTTTCTGCAGCCTTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| 3UTR-3UTR CAA 90 bp | AACAGAGGTTCAAAACACAGCCAGGCTCCAAAGCCCACTGCTGGTTTTGTTATTTGCCATGGGCTTCTTTaGTCTGAGGTTTGGTGGGTG | + |
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Preference number: 3 (lower is better) Translates to: NRGSKHSQAPKPTAGFVICHGLL*SEVWWV Trigger: CACCCACCAAACCTCAGACAAAAGAAGCCCATGGCA...AATAACAAAACCAGCAGTGGGCTTTGGAGCCTGGCTGTGTTTTGAACCTCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| 3UTR TCA 72 bp | CAGGCTCCAAAGCCCACTGCTGGTTTTGTTATTAAGTaGTGTGGTCTCTCAGCATGGGTTCAGTACAGTCTC | + |
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Preference number: 3 (lower is better) Translates to: QAPKPTAGFVIK*CGLSAWVQYSL Trigger: GAGACTGTACTGAACCCATGCTGAGAGACCACATCACTTAATAACAAAACCAGCAGTGGGCTTTGGAGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| 3UTR CCA 72 bp | ACATCTGAAGGCACATGGACAAATTTCCTTTCTGCATaGCTCAGGCACATCTGGAGTCATACAGATGGCACT | + |
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Preference number: 3 (lower is better) Translates to: TSEGTWTNFLSA*LRHIWSHTDGT Trigger: AGTGCCATCTGTATGACTCCAGATGTGCCTGAGCCATGCAGAAAGGAAATTTGTCCATGTGCCTTCAGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| 3UTR GCA 72 bp | AAGCACTTCACAAGCATTGTAAACTCACGGTCTCGATaGTCTGAGAATGGAATTCCTCATACTAGCGTACAC | + |
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Preference number: 3 (lower is better) Translates to: KHFTSIVNSRSR*SENGIPHTSVH Trigger: GTGTACGCTAGTATGAGGAATTCCATTCTCAGAGCATCGAGACCGTGAGTTTACAATGCTTGTGAAGTGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| 3UTR-3UTR CAA 90 bp | TTATTTATAAGCATTACAGGTAAGATGCATTTGTTCCTAAGACATGATGGAGGCGAAAAGAGCGGTTTCTaGCCATGGGCTTCTTTTGTC | + |
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Preference number: 3 (lower is better) Translates to: LFISITGKMHLFLRHDGGEKSGF*PWASFV Trigger: GACAAAAGAAGCCCATGGCAAGAAACCGCTCTTTTC...GCCTCCATCATGTCTTAGGAACAAATGCATCTTACCTGTAATGCTTATAAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| 3UTR-3UTR CAA 90 bp | CGCTTCTTGAAATTGTCAATTTCAGAGCATGAAGTGAAGGTACCGACTCAAGAAATGAACACTTTTAAGTaGCTGTGCTTTCGGAATGAG | + |
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Preference number: 3 (lower is better) Translates to: RFLKLSISEHEVKVPTQEMNTFK*LCFRNE Trigger: CTCATTCCGAAAGCACAGCAACTTAAAAGTGTTCAT...TTCTTGAGTCGGTACCTTCACTTCATGCTCTGAAATTGACAATTTCAAGAAGCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| 3UTR TCA 72 bp | CCAGAATCGCTTCTTGAAATTGTCAATTTCAGAGCATaGAGTGAAGGTACCGACTCAAGAAAAAGATTTTTA | + |
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Preference number: 3 (lower is better) Translates to: PESLLEIVNFRA*SEGTDSRKRFL Trigger: TAAAAATCTTTTTCTTGAGTCGGTACCTTCACTTCATGCTCTGAAATTGACAATTTCAAGAAGCGATTCTGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| CDS-3UTR TCA 90 bp | CCAGCCTATGCTTGCCCTCCACGGGAAGCAGTAGAGCCAAAGCCCTGGATTGAACTGAGGGTCCTGCTGTaGGGGAGGGTCAGTTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: PAYACPPREAVEPKPWIELRVLL*GRVSCS Trigger: GCTGCAACTGACCCTCCCTCACAGCAGGACCCTCAG...TTCAATCCAGGGCTTTGGCTCTACTGCTTCCCGTGGAGGGCAAGCATAGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| CDS-3UTR TCA 90 bp | CCAGCCTATGCTTGCCCTCCACGGGAAGCAGTAGAGCCAAAGCCCTGGATTGAAATGCATCCCACTGGCTaGCAGCGACGAGCCCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: PAYACPPREAVEPKPWIEMHPTG*QRRALR Trigger: CCTCAGGGCTCGTCGCTGTCAGCCAGTGGGATGCAT...TTCAATCCAGGGCTTTGGCTCTACTGCTTCCCGTGGAGGGCAAGCATAGGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| CDS-3UTR TCA 90 bp | CCAGCCTATGCTTGCCCTCCACGGGAAGCAGTAGAGCCAAAGCCCTGGATTGAACACTCCCAGCCATGTTaGCCAGGAAGCCCAGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: PAYACPPREAVEPKPWIEHSQPC*PGSPGH Trigger: GTGGCCTGGGCTTCCTGGTCAACATGGCTGGGAGTG...TTCAATCCAGGGCTTTGGCTCTACTGCTTCCCGTGGAGGGCAAGCATAGGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| CDS-3UTR CCA 90 bp | CTGCATGGCTCAGGCACATCTGGAGTCATACAGATGGCACTTAACCAAGGCTGCGTTGTCAGGGCCTCCTaGCGCTTCCTGCCCCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: LHGSGTSGVIQMALNQGCVVRAS*RFLPLL Trigger: GAGAAGGGGCAGGAAGCGCCAGGAGGCCCTGACAAC...GCAGCCTTGGTTAAGTGCCATCTGTATGACTCCAGATGTGCCTGAGCCATGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| CDS-3UTR TCA 90 bp | CCAGCCTATGCTTGCCCTCCACGGGAAGCAGTAGAGCCAAAGCCCTGGATTGAACAGTTGCAGCATCTCTaGGTGGAGCTTCAGGGATAC | + |
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Preference number: 4 (lower is better) Translates to: PAYACPPREAVEPKPWIEQLQHL*VELQGY Trigger: GTATCCCTGAAGCTCCACTCAGAGATGCTGCAACTG...TTCAATCCAGGGCTTTGGCTCTACTGCTTCCCGTGGAGGGCAAGCATAGGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| CDS-3UTR CCA 90 bp | CCAGCCTATGCTTGCCCTCCACGGGAAGCAGTAGAGCCAAAGCCCTGGATTGAACACGCTGAGCAGAACTaGAGTCACATAAGCTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: PAYACPPREAVEPKPWIEHAEQN*SHISCL Trigger: GAGGCAGCTTATGTGACTCCAGTTCTGCTCAGCGTG...TTCAATCCAGGGCTTTGGCTCTACTGCTTCCCGTGGAGGGCAAGCATAGGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| CDS-3UTR CCA 90 bp | CTGAGTACCAAACAGAGGTTCAAAACACAGCCAGGCTCCAAAGCCCACTGCTGGCAGAGTCAGGATGTATaGTCTCCGGCGACCCCAACG | + |
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Preference number: 4 (lower is better) Translates to: LSTKQRFKTQPGSKAHCWQSQDV*SPATPT Trigger: CGTTGGGGTCGCCGGAGACCATACATCCTGACTCTG...CCAGCAGTGGGCTTTGGAGCCTGGCTGTGTTTTGAACCTCTGTTTGGTACTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| CDS-3UTR TCA 90 bp | AAGAGTCCGAGAAAAGAGCGGTTTCTTGCCATGGGCTTCTTTTGTCTGAGGTTTGACAGCGACGAGCCCTaGGGGTCCTGCTGTGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: KSPRKERFLAMGFFCLRFDSDEP*GSCCEG Trigger: TCCCTCACAGCAGGACCCTCAGGGCTCGTCGCTGTC...AAACCTCAGACAAAAGAAGCCCATGGCAAGAAACCGCTCTTTTCTCGGACTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| 3UTR CAA 72 bp | GCAGTAGAGCCAAAGCCCTGGATTGAAAGCCCAGCTTaGCCACATATGACTTGTGTGGCTTCAGTGAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: AVEPKPWIESPA*PHMTCVASVRH Trigger: GTGCCTCACTGAAGCCACACAAGTCATATGTGGCAAAGCTGGGCTTTCAATCCAGGGCTTTGGCTCTACTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| CDS-3UTR TCA 90 bp | TCTGGAGTCATACAGATGGCACTTAACCAAGGCTGCAGAAAACCTAAGGAGAGAGCAGTGATCACTGGCTaGTCCCACCACAGGCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: SGVIQMALNQGCRKPKERAVITG*SHHRLE Trigger: CTCCAGCCTGTGGTGGGATCAGCCAGTGATCACTGC...TCTCTCCTTAGGTTTTCTGCAGCCTTGGTTAAGTGCCATCTGTATGACTCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| CDS-3UTR TCA 90 bp | TCTGGAGTCATACAGATGGCACTTAACCAAGGCTGCAGAAAACCTAAGGAGAGAACACCGCAGACGCTGTaGTCACCACGACGACGACAC | + |
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Preference number: 4 (lower is better) Translates to: SGVIQMALNQGCRKPKERTPQTL*SPRRRH Trigger: GTGTCGTCGTCGTGGTGATCACAGCGTCTGCGGTGT...TCTCTCCTTAGGTTTTCTGCAGCCTTGGTTAAGTGCCATCTGTATGACTCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| CDS-3UTR GCA 90 bp | CTGCATGGCTCAGGCACATCTGGAGTCATACAGATGGCACTTAACCAAGGCTGCGCCCAGATCAGCTTCTaGCTTGGGTTAGCAACCAAA | + |
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Preference number: 4 (lower is better) Translates to: LHGSGTSGVIQMALNQGCAQISF*LGLATK Trigger: TTTGGTTGCTAACCCAAGGCAGAAGCTGATCTGGGC...GCAGCCTTGGTTAAGTGCCATCTGTATGACTCCAGATGTGCCTGAGCCATGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| CDS-3UTR CCA 90 bp | CTGAGTACCAAACAGAGGTTCAAAACACAGCCAGGCTCCAAAGCCCACTGCTGGTGCAGCATCTCTGAGTaGAGCTTCAGGGATACTGCA | + |
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Preference number: 4 (lower is better) Translates to: LSTKQRFKTQPGSKAHCWCSISE*SFRDTA Trigger: TGCAGTATCCCTGAAGCTCCACTCAGAGATGCTGCA...CCAGCAGTGGGCTTTGGAGCCTGGCTGTGTTTTGAACCTCTGTTTGGTACTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| CDS-3UTR GCA 90 bp | GAGAAAAGAGCGGTTTCTTGCCATGGGCTTCTTTTGTCTGAGGTTTGGTGGGTGCTTCCCAGATCTAGATaGACCCAGTCTATGGCACCC | + |
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Preference number: 4 (lower is better) Translates to: EKRAVSCHGLLLSEVWWVLPRSR*TQSMAP Trigger: GGGTGCCATAGACTGGGTGCATCTAGATCTGGGAAG...CACCCACCAAACCTCAGACAAAAGAAGCCCATGGCAAGAAACCGCTCTTTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| CDS-3UTR TCA 90 bp | CGCTTCTTGAAATTGTCAATTTCAGAGCATGAAGTGAAGGTACCGACTCAAGAACAACGGGCCCTGCAGTaGTCACTGGCTGATCCCACC | + |
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Preference number: 4 (lower is better) Translates to: RFLKLSISEHEVKVPTQEQRALQ*SLADPT Trigger: GGTGGGATCAGCCAGTGATCACTGCAGGGCCCGTTG...TTCTTGAGTCGGTACCTTCACTTCATGCTCTGAAATTGACAATTTCAAGAAGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| CDS-3UTR TCA 90 bp | CTGAGTACCAAACAGAGGTTCAAAACACAGCCAGGCTCCAAAGCCCACTGCTGGCTCCTCTTTCATAGATaGGAAACTCCGTGGAGTTGT | + |
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Preference number: 4 (lower is better) Translates to: LSTKQRFKTQPGSKAHCWLLFHR*ETPWSC Trigger: ACAACTCCACGGAGTTTCTCATCTATGAAAGAGGAG...CCAGCAGTGGGCTTTGGAGCCTGGCTGTGTTTTGAACCTCTGTTTGGTACTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| CDS-3UTR TCA 90 bp | CTGCATGGCTCAGGCACATCTGGAGTCATACAGATGGCACTTAACCAAGGCTGCAAGAAAACACAGAGTTaGTGCACAAGCCCCAACATC | + |
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Preference number: 4 (lower is better) Translates to: LHGSGTSGVIQMALNQGCKKTQS*CTSPNI Trigger: GATGTTGGGGCTTGTGCATCAACTCTGTGTTTTCTT...GCAGCCTTGGTTAAGTGCCATCTGTATGACTCCAGATGTGCCTGAGCCATGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| CDS-3UTR TCA 90 bp | AAGAGTCCGAGAAAAGAGCGGTTTCTTGCCATGGGCTTCTTTTGTCTGAGGTTTCCTCCAACCAAGATCTaGGCCAGCTGTACCATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KSPRKERFLAMGFFCLRFPPTKI*ASCTMQ Trigger: CTGCATGGTACAGCTGGCTCAGATCTTGGTTGGAGG...AAACCTCAGACAAAAGAAGCCCATGGCAAGAAACCGCTCTTTTCTCGGACTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| 3UTR CAA 72 bp | GACTTGTGTGGCTTCAGTGAGGCACCTAATGGAGCTTaGCTCTGGTTCCCTCATGTAAGAGTGAAGATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DLCGFSEAPNGA*LWFPHVRVKIS Trigger: GCTGATCTTCACTCTTACATGAGGGAACCAGAGCAAAGCTCCATTAGGTGCCTCACTGAAGCCACACAAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS-3UTR TCA 90 bp | AACAGAGGTTCAAAACACAGCCAGGCTCCAAAGCCCACTGCTGGTTTTGTTATTCACCTCCAAAACCTGTaGAGAGGGCATGGTAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NRGSKHSQAPKPTAGFVIHLQNL*RGHGSG Trigger: TCCACTACCATGCCCTCTTCACAGGTTTTGGAGGTG...AATAACAAAACCAGCAGTGGGCTTTGGAGCCTGGCTGTGTTTTGAACCTCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS-3UTR GCA 90 bp | CTGCATGGCTCAGGCACATCTGGAGTCATACAGATGGCACTTAACCAAGGCTGCTGGCTGCTCTGTGTCTaGACCTCCATTTTTAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: LHGSGTSGVIQMALNQGCWLLCV*TSIFNF Trigger: AAAGTTAAAAATGGAGGTGCAGACACAGAGCAGCCA...GCAGCCTTGGTTAAGTGCCATCTGTATGACTCCAGATGTGCCTGAGCCATGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS-3UTR CCA 90 bp | CTAAGACTTTGCGGTAAGGGGAAGCACTTCACAAGCATTGTAAACTCACGGTCTTCCCTGTGGATCTCTTaGGTTGCTCCACAGAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LRLCGKGKHFTSIVNSRSSLWIS*VAPQSQ Trigger: TTGGCTCTGTGGAGCAACCCAAGAGATCCACAGGGA...AGACCGTGAGTTTACAATGCTTGTGAAGTGCTTCCCCTTACCGCAAAGTCTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| 3UTR CAA 72 bp | CAAAACACAGCCAGGCTCCAAAGCCCACTGCTGGTTTaGTTATTAAGTGATGTGGTCTCTCAGCATGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QNTARLQSPLLV*LLSDVVSQHGF Trigger: GAACCCATGCTGAGAGACCACATCACTTAATAACAAAACCAGCAGTGGGCTTTGGAGCCTGGCTGTGTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS-3UTR GCA 90 bp | CGCTTCTTGAAATTGTCAATTTCAGAGCATGAAGTGAAGGTACCGACTCAAGAACTCCGTGGAGTTGTGTaGACCGTAGGGATCCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: RFLKLSISEHEVKVPTQELRGVV*TVGIPM Trigger: CATGGGGATCCCTACGGTGCACACAACTCCACGGAG...TTCTTGAGTCGGTACCTTCACTTCATGCTCTGAAATTGACAATTTCAAGAAGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS-3UTR TCA 90 bp | AACAGAGGTTCAAAACACAGCCAGGCTCCAAAGCCCACTGCTGGTTTTGTTATTTTGGAAAGAGTCCTATaGATCCTGTTCCCAGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: NRGSKHSQAPKPTAGFVILERVL*ILFPGQ Trigger: TTGGCCTGGGAACAGGATTCATAGGACTCTTTCCAA...AATAACAAAACCAGCAGTGGGCTTTGGAGCCTGGCTGTGTTTTGAACCTCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS-3UTR CCA 90 bp | CGCTTCTTGAAATTGTCAATTTCAGAGCATGAAGTGAAGGTACCGACTCAAGAAGTCCATCCAATCAGGTaGCTGACGCAAAGGCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: RFLKLSISEHEVKVPTQEVHPIR*LTQRQR Trigger: TCGCTGCCTTTGCGTCAGCCACCTGATTGGATGGAC...TTCTTGAGTCGGTACCTTCACTTCATGCTCTGAAATTGACAATTTCAAGAAGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS-3UTR CCA 90 bp | TTATTTATAAGCATTACAGGTAAGATGCATTTGTTCCTAAGACATGATGGAGGCCCTTTGCCTCTCCCCTaGTTGTCAGGGCCTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LFISITGKMHLFLRHDGGPLPLP*LSGPPG Trigger: GCCAGGAGGCCCTGACAACCAGGGGAGAGGCAAAGG...GCCTCCATCATGTCTTAGGAACAAATGCATCTTACCTGTAATGCTTATAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS-3UTR CCA 90 bp | AAGAGTCCGAGAAAAGAGCGGTTTCTTGCCATGGGCTTCTTTTGTCTGAGGTTTTTCTCCTTGTCCTGGTaGGAGCAGACATCAAATAAG | + |
|
Preference number: 4 (lower is better) Translates to: KSPRKERFLAMGFFCLRFFSLSW*EQTSNK Trigger: CTTATTTGATGTCTGCTCCCACCAGGACAAGGAGAA...AAACCTCAGACAAAAGAAGCCCATGGCAAGAAACCGCTCTTTTCTCGGACTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS-3UTR CCA 90 bp | GAGTGGAAACCCATAGCTTTATCTTTTACATCTGAAGGCACATGGACAAATTTCATTCATGCATCCCACTaGCTGACAGCGACGAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: EWKPIALSFTSEGTWTNFIHASH*LTATSP Trigger: AGGGCTCGTCGCTGTCAGCCAGTGGGATGCATGAAT...GAAATTTGTCCATGTGCCTTCAGATGTAAAAGATAAAGCTATGGGTTTCCACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS-3UTR GCA 90 bp | AAGAGTCCGAGAAAAGAGCGGTTTCTTGCCATGGGCTTCTTTTGTCTGAGGTTTGCACAGTGTACAATGTaGTGGACATTACACCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: KSPRKERFLAMGFFCLRFAQCTM*WTLHQT Trigger: TGTTTGGTGTAATGTCCAGCACATTGTACACTGTGC...AAACCTCAGACAAAAGAAGCCCATGGCAAGAAACCGCTCTTTTCTCGGACTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS-3UTR TCA 90 bp | TTGTCAATTTCAGAGCATGAAGTGAAGGTACCGACTCAAGAAAAAGATTTTTACTGGCCATGCTGTGCATaGCAAGTCTCCCTGTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LSISEHEVKVPTQEKDFYWPCCA*QVSLWI Trigger: GATCCACAGGGAGACTTGTCATGCACAGCATGGCCA...GTAAAAATCTTTTTCTTGAGTCGGTACCTTCACTTCATGCTCTGAAATTGACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS-3UTR GCA 90 bp | GAGTGGAAACCCATAGCTTTATCTTTTACATCTGAAGGCACATGGACAAATTTCAACATGGCCATGCTGTaGATGACAAGTCTCCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: EWKPIALSFTSEGTWTNFNMAML*MTSLPV Trigger: CACAGGGAGACTTGTCATGCACAGCATGGCCATGTT...GAAATTTGTCCATGTGCCTTCAGATGTAAAAGATAAAGCTATGGGTTTCCACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS-3UTR CCA 90 bp | TTGTCAATTTCAGAGCATGAAGTGAAGGTACCGACTCAAGAAAAAGATTTTTACGATCCCACCACAGGCTaGAGCAGGAATCCCAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LSISEHEVKVPTQEKDFYDPTTG*SRNPKM Trigger: CATCTTGGGATTCCTGCTCCAGCCTGTGGTGGGATC...GTAAAAATCTTTTTCTTGAGTCGGTACCTTCACTTCATGCTCTGAAATTGACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS-3UTR CCA 90 bp | CGCTTCTTGAAATTGTCAATTTCAGAGCATGAAGTGAAGGTACCGACTCAAGAAGATGCACCCAGTCTATaGCACCCAAAATGTAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RFLKLSISEHEVKVPTQEDAPSL*HPKCSQ Trigger: TTGGCTACATTTTGGGTGCCATAGACTGGGTGCATC...TTCTTGAGTCGGTACCTTCACTTCATGCTCTGAAATTGACAATTTCAAGAAGCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| 3UTR CAA 72 bp | TTGCTGTGCTTTCGGAATGAGACCTCCAACGCAGGCTaGTTCAGAATGTCATACATTAGACGGGAATTAATT | + |
|
Preference number: 4 (lower is better) Translates to: LLCFRNETSNAG*FRMSYIRRELI Trigger: AATTAATTCCCGTCTAATGTATGACATTCTGAACAAGCCTGCGTTGGAGGTCTCATTCCGAAAGCACAGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS-3UTR TCA 90 bp | TTGTCAATTTCAGAGCATGAAGTGAAGGTACCGACTCAAGAAAAAGATTTTTACATCGACATTGTCCTCTaGCTCTGGCCAGAAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSISEHEVKVPTQEKDFYIDIVL*LWPEGF Trigger: AAAGCCTTCTGGCCAGAGTCAGAGGACAATGTCGAT...GTAAAAATCTTTTTCTTGAGTCGGTACCTTCACTTCATGCTCTGAAATTGACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS-3UTR TCA 90 bp | TTATTTATAAGCATTACAGGTAAGATGCATTTGTTCCTAAGACATGATGGAGGCGAAGAAGAGCATGTTTaGCAGGAAGGCAGTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LFISITGKMHLFLRHDGGEEEHV*QEGSPS Trigger: GGATGGACTGCCTTCCTGTCAAACATGCTCTTCTTC...GCCTCCATCATGTCTTAGGAACAAATGCATCTTACCTGTAATGCTTATAAATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS-3UTR GCA 90 bp | TTATTTATAAGCATTACAGGTAAGATGCATTTGTTCCTAAGACATGATGGAGGCATAGAACCGTATTCATaGATCCCACTGGCTGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LFISITGKMHLFLRHDGGIEPYS*IPLADS Trigger: GCTGTCAGCCAGTGGGATGCATGAATACGGTTCTAT...GCCTCCATCATGTCTTAGGAACAAATGCATCTTACCTGTAATGCTTATAAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS CCA 90 bp | GGATGTATGGTCTCCGGCGACCCCAACGGGCCCTGCAGTGATCACTaGCTGATCCCACCACAGGCTGGAGCAGGAATCCCAAGATGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GCMVSGDPNGPCSDH*LIPPQAGAGIPRWG Trigger: GCCCCATCTTGGGATTCCTGCTCCAGCCTGTGGTGGGATCAGCCAGTGATCACTGCAGGGCCCGTTGGGGTCGCCGGAGACCATACATCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS GCA 90 bp | TGGCCAGAGTCAGGATGTATGGTCTCCGGCGACCCCAACGGGCCCTaGAGTGATCACTGGCTGATCCCACCACAGGCTGGAGCAGGAATC | + |
|
Preference number: 5 (lower is better) Translates to: WPESGCMVSGDPNGP*SDHWLIPPQAGAGI Trigger: GATTCCTGCTCCAGCCTGTGGTGGGATCAGCCAGTGATCACTGCAGGGCCCGTTGGGGTCGCCGGAGACCATACATCCTGACTCTGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS TCA 90 bp | AGAGTCAGGATGTATGGTCTCCGGCGACCCCAACGGGCCCTGCAGTaGTCACTGGCTGATCCCACCACAGGCTGGAGCAGGAATCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: RVRMYGLRRPQRALQ*SLADPTTGWSRNPK Trigger: CTTGGGATTCCTGCTCCAGCCTGTGGTGGGATCAGCCAGTGATCACTGCAGGGCCCGTTGGGGTCGCCGGAGACCATACATCCTGACTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS-3UTR CAA 90 bp | CCAGCCTATGCTTGCCCTCCACGGGAAGCAGTAGAGCCAAAGCCCTGGATTGAAACACTCCCAGCCATGTaGACCAGGAAGCCCAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PAYACPPREAVEPKPWIETLPAM*TRKPRP Trigger: TGGCCTGGGCTTCCTGGTCAACATGGCTGGGAGTGT...TTCAATCCAGGGCTTTGGCTCTACTGCTTCCCGTGGAGGGCAAGCATAGGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS CCA 90 bp | CACCATGCTGTACAGGCTCTTAGGCAGGCCCACGCTGAGCAGAACTaGAGTCACATAAGCTGCCTCCACCGCATAGCAAAACTCTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HHAVQALRQAHAEQN*SHISCLHRIAKLSA Trigger: GGCCGAGAGTTTTGCTATGCGGTGGAGGCAGCTTATGTGACTCCAGTTCTGCTCAGCGTGGGCCTGCCTAAGAGCCTGTACAGCATGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS TCA 90 bp | ATAGAACCGTATTCATGCATCCCACTGGCTGACAGCGACGAGCCCTaGGGGTCCTGCTGTGAGGGAGGGTCAGTTGCAGCATCTCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: IEPYSCIPLADSDEP*GSCCEGGSVAASLS Trigger: ACTCAGAGATGCTGCAACTGACCCTCCCTCACAGCAGGACCCTCAGGGCTCGTCGCTGTCAGCCAGTGGGATGCATGAATACGGTTCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS GCA 90 bp | GCTCTTAGGCAGGCCCACGCTGAGCAGAACTGGAGTCACATAAGCTaGCTCCACCGCATAGCAAAACTCTCGGCCAAACATGGCCATGCT | + |
|
Preference number: 5 (lower is better) Translates to: ALRQAHAEQNWSHIS*LHRIAKLSAKHGHA Trigger: AGCATGGCCATGTTTGGCCGAGAGTTTTGCTATGCGGTGGAGGCAGCTTATGTGACTCCAGTTCTGCTCAGCGTGGGCCTGCCTAAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS TCA 90 bp | CCACCGCATAGCAAAACTCTCGGCCAAACATGGCCATGCTGTGCATaGCAAGTCTCCCTGTGGATCTCTTGGGTTGCTCCACAGAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: PPHSKTLGQTWPCCA*QVSLWISWVAPQSQ Trigger: TTGGCTCTGTGGAGCAACCCAAGAGATCCACAGGGAGACTTGTCATGCACAGCATGGCCATGTTTGGCCGAGAGTTTTGCTATGCGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS-3UTR CAA 90 bp | AAGAGTCCGAGAAAAGAGCGGTTTCTTGCCATGGGCTTCTTTTGTCTGAGGTTTTTGCCTCTCCCCTGGTaGTCAGGGCCTCCTGGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: KSPRKERFLAMGFFCLRFLPLPW*SGPPGA Trigger: AGCGCCAGGAGGCCCTGACAACCAGGGGAGAGGCAA...AAACCTCAGACAAAAGAAGCCCATGGCAAGAAACCGCTCTTTTCTCGGACTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS GCA 90 bp | AGAACCACACCTACCATGGTGATGCTTATGGCCCAGATCAGCTTCTaGCTTGGGTTAGCAACCAAAGCTGATACGACCGCATCTCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: RTTPTMVMLMAQISF*LGLATKADTTASPL Trigger: CAATGGAGATGCGGTCGTATCAGCTTTGGTTGCTAACCCAAGGCAGAAGCTGATCTGGGCCATAAGCATCACCATGGTAGGTGTGGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| CDS GCA 90 bp | GACCTCAACTCCTCTTTCATAGATGAGAAACTCCGTGGAGTTGTGTaGACCGTAGGGATCCCCATGGTATACAATCTGTCCCATGAAATC | + |
|
Preference number: 5 (lower is better) Translates to: DLNSSFIDEKLRGVV*TVGIPMVYNLSHEI Trigger: GATTTCATGGGACAGATTGTATACCATGGGGATCCCTACGGTGCACACAACTCCACGGAGTTTCTCATCTATGAAAGAGGAGTTGAGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS-3UTR CAA 90 bp | CGCTTCTTGAAATTGTCAATTTCAGAGCATGAAGTGAAGGTACCGACTCAAGAATGTGGATCTCTTGGGTaGCTCCACAGAGCCAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RFLKLSISEHEVKVPTQECGSLG*LHRAKG Trigger: CCCTTTGGCTCTGTGGAGCAACCCAAGAGATCCACA...TTCTTGAGTCGGTACCTTCACTTCATGCTCTGAAATTGACAATTTCAAGAAGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS-3UTR CAA 90 bp | GAGTGGAAACCCATAGCTTTATCTTTTACATCTGAAGGCACATGGACAAATTTCCTCCCTGTGGATCTCTaGGGTTGCTCCACAGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: EWKPIALSFTSEGTWTNFLPVDL*GCSTEP Trigger: TGGCTCTGTGGAGCAACCCAAGAGATCCACAGGGAG...GAAATTTGTCCATGTGCCTTCAGATGTAAAAGATAAAGCTATGGGTTTCCACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS-3UTR CAA 90 bp | CGCTTCTTGAAATTGTCAATTTCAGAGCATGAAGTGAAGGTACCGACTCAAGAAACGACCGCATCTCCATaGAGGTACAGAGCCATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RFLKLSISEHEVKVPTQETTASP*RYRAIP Trigger: GGGAATGGCTCTGTACCTCAATGGAGATGCGGTCGT...TTCTTGAGTCGGTACCTTCACTTCATGCTCTGAAATTGACAATTTCAAGAAGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS TCA 90 bp | ATGTTTACTAATGCCCGAAGGAGTGACTTCATCGACATTGTCCTCTaGCTCTGGCCAGAAGGCTTTTTGTTTTTCCATTCCTGTACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: MFTNARRSDFIDIVL*LWPEGFLFFHSCTG Trigger: GCCAGTACAGGAATGGAAAAACAAAAAGCCTTCTGGCCAGAGTCAGAGGACAATGTCGATGAAGTCACTCCTTCGGGCATTAGTAAACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS-3UTR CAA 90 bp | GAGTGGAAACCCATAGCTTTATCTTTTACATCTGAAGGCACATGGACAAATTTCGTGACTTCATCGACATaGTCCTCTGACTCTGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: EWKPIALSFTSEGTWTNFVTSST*SSDSGQ Trigger: CTGGCCAGAGTCAGAGGACAATGTCGATGAAGTCAC...GAAATTTGTCCATGTGCCTTCAGATGTAAAAGATAAAGCTATGGGTTTCCACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS CCA 72 bp | GTGAGAGCAGCGCAGTCCACGCCTTTGCCTCTCCCCTaGTTGTCAGGGCCTCCTGGCGCTTCCTGCCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VRAAQSTPLPLP*LSGPPGASCPF Trigger: GAAGGGGCAGGAAGCGCCAGGAGGCCCTGACAACCAGGGGAGAGGCAAAGGCGTGGACTGCGCTGCTCTCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS TCA 72 bp | CCGGCGACCCCAACGGGCCCTGCAGTGATCACTGGCTaGTCCCACCACAGGCTGGAGCAGGAATCCCAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: PATPTGPAVITG*SHHRLEQESQD Trigger: ATCTTGGGATTCCTGCTCCAGCCTGTGGTGGGATCAGCCAGTGATCACTGCAGGGCCCGTTGGGGTCGCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS TCA 72 bp | ATGTATGGTCTCCGGCGACCCCAACGGGCCCTGCAGTaGTCACTGGCTGATCCCACCACAGGCTGGAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: MYGLRRPQRALQ*SLADPTTGWSR Trigger: CCTGCTCCAGCCTGTGGTGGGATCAGCCAGTGATCACTGCAGGGCCCGTTGGGGTCGCCGGAGACCATACAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS CAA 72 bp | TGTACCATGCAGGTGAGAGCAGCGCAGTCCACGCCTTaGCCTCTCCCCTGGTTGTCAGGGCCTCCTGGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: CTMQVRAAQSTP*PLPWLSGPPGA Trigger: AGCGCCAGGAGGCCCTGACAACCAGGGGAGAGGCAAAGGCGTGGACTGCGCTGCTCTCACCTGCATGGTACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS GCA 72 bp | TCAGGATGTATGGTCTCCGGCGACCCCAACGGGCCCTaGAGTGATCACTGGCTGATCCCACCACAGGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SGCMVSGDPNGP*SDHWLIPPQAG Trigger: TCCAGCCTGTGGTGGGATCAGCCAGTGATCACTGCAGGGCCCGTTGGGGTCGCCGGAGACCATACATCCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS TCA 72 bp | TATTCATGCATCCCACTGGCTGACAGCGACGAGCCCTaGGGGTCCTGCTGTGAGGGAGGGTCAGTTGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: YSCIPLADSDEP*GSCCEGGSVAA Trigger: TGCTGCAACTGACCCTCCCTCACAGCAGGACCCTCAGGGCTCGTCGCTGTCAGCCAGTGGGATGCATGAATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS TCA 72 bp | CTCCAACCAAGATCTGAGCCAGCTGTACCATGCAGGTaGGAGCAGCGCAGTCCACGCCTTTGCCTCTCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: LQPRSEPAVPCR*EQRSPRLCLSP Trigger: AGGGGAGAGGCAAAGGCGTGGACTGCGCTGCTCTCACCTGCATGGTACAGCTGGCTCAGATCTTGGTTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS GCA 72 bp | CTGTGCATGACAAGTCTCCCTGTGGATCTCTTGGGTTaGTCCACAGAGCCAAAGGGGCAATCCTCGGCTAAG | + |
|
Preference number: 6 (lower is better) Translates to: LCMTSLPVDLLG*STEPKGQSSAK Trigger: CTTAGCCGAGGATTGCCCCTTTGGCTCTGTGGAGCAACCCAAGAGATCCACAGGGAGACTTGTCATGCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS GCA 72 bp | CAGGCCCACGCTGAGCAGAACTGGAGTCACATAAGCTaGCTCCACCGCATAGCAAAACTCTCGGCCAAACAT | + |
|
Preference number: 6 (lower is better) Translates to: QAHAEQNWSHIS*LHRIAKLSAKH Trigger: ATGTTTGGCCGAGAGTTTTGCTATGCGGTGGAGGCAGCTTATGTGACTCCAGTTCTGCTCAGCGTGGGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS CCA 72 bp | GTACAGGCTCTTAGGCAGGCCCACGCTGAGCAGAACTaGAGTCACATAAGCTGCCTCCACCGCATAGCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: VQALRQAHAEQN*SHISCLHRIAK Trigger: TTTTGCTATGCGGTGGAGGCAGCTTATGTGACTCCAGTTCTGCTCAGCGTGGGCCTGCCTAAGAGCCTGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
||
| CDS CCA 72 bp | CCAGCAGCCTTCCCAGATCTAGATGCACCCAGTCTATaGCACCCAAAATGTAGCCAAGGGCACCTCCAAAAC | + |
|
Preference number: 6 (lower is better) Translates to: PAAFPDLDAPSL*HPKCSQGHLQN Trigger: GTTTTGGAGGTGCCCTTGGCTACATTTTGGGTGCCATAGACTGGGTGCATCTAGATCTGGGAAGGCTGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| CDS TCA 72 bp | AGCAAAACTCTCGGCCAAACATGGCCATGCTGTGCATaGCAAGTCTCCCTGTGGATCTCTTGGGTTGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: SKTLGQTWPCCA*QVSLWISWVAP Trigger: TGGAGCAACCCAAGAGATCCACAGGGAGACTTGTCATGCACAGCATGGCCATGTTTGGCCGAGAGTTTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| CDS GCA 72 bp | CCTACCATGGTGATGCTTATGGCCCAGATCAGCTTCTaGCTTGGGTTAGCAACCAAAGCTGATACGACCGCA | + |
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Preference number: 6 (lower is better) Translates to: PTMVMLMAQISF*LGLATKADTTA Trigger: TGCGGTCGTATCAGCTTTGGTTGCTAACCCAAGGCAGAAGCTGATCTGGGCCATAAGCATCACCATGGTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| CDS TCA 72 bp | AGCCCCAACATCCGACCTCAACTCCTCTTTCATAGATaGGAAACTCCGTGGAGTTGTGTGCACCGTAGGGAT | + |
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Preference number: 6 (lower is better) Translates to: SPNIRPQLLFHR*ETPWSCVHRRD Trigger: ATCCCTACGGTGCACACAACTCCACGGAGTTTCTCATCTATGAAAGAGGAGTTGAGGTCGGATGTTGGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| CDS CAA 90 bp | TTCTGCCTTGGGTTAGCAACCAAAGCTGATACGACCGCATCTCCATaGAGGTACAGAGCCATTCCCAAGAGCATCATAATGGCCAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: FCLGLATKADTTASP*RYRAIPKSIIMARV Trigger: GACTCTGGCCATTATGATGCTCTTGGGAATGGCTCTGTACCTCAATGGAGATGCGGTCGTATCAGCTTTGGTTGCTAACCCAAGGCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| CDS TCA 72 bp | CAGCAGAAAAATCGAAGAGAACCACACCTACCATGGTaGTGCTTATGGCCCAGATCAGCTTCTGCCTTGGGT | + |
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Preference number: 6 (lower is better) Translates to: QQKNRREPHLPW*CLWPRSASALG Trigger: ACCCAAGGCAGAAGCTGATCTGGGCCATAAGCATCACCATGGTAGGTGTGGTTCTCTTCGATTTTTCTGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| CDS GCA 72 bp | TCCTCTTTCATAGATGAGAAACTCCGTGGAGTTGTGTaGACCGTAGGGATCCCCATGGTATACAATCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: SSFIDEKLRGVV*TVGIPMVYNLS Trigger: GGACAGATTGTATACCATGGGGATCCCTACGGTGCACACAACTCCACGGAGTTTCTCATCTATGAAAGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| CDS CAA 72 bp | GGGTTAGCAACCAAAGCTGATACGACCGCATCTCCATaGAGGTACAGAGCCATTCCCAAGAGCATCATAATG | + |
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Preference number: 6 (lower is better) Translates to: GLATKADTTASP*RYRAIPKSIIM Trigger: CATTATGATGCTCTTGGGAATGGCTCTGTACCTCAATGGAGATGCGGTCGTATCAGCTTTGGTTGCTAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| CDS TCA 72 bp | AATGCCCGAAGGAGTGACTTCATCGACATTGTCCTCTaGCTCTGGCCAGAAGGCTTTTTGTTTTTCCATTCC | + |
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Preference number: 6 (lower is better) Translates to: NARRSDFIDIVL*LWPEGFLFFHS Trigger: GGAATGGAAAAACAAAAAGCCTTCTGGCCAGAGTCAGAGGACAATGTCGATGAAGTCACTCCTTCGGGCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| CDS CAA 72 bp | TGTTTACTAATGCCCGAAGGAGTGACTTCATCGACATaGTCCTCTGACTCTGGCCAGAAGGCTTTTTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: CLLMPEGVTSST*SSDSGQKAFCF Trigger: AAAACAAAAAGCCTTCTGGCCAGAGTCAGAGGACAATGTCGATGAAGTCACTCCTTCGGGCATTAGTAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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| CDS CCA 72 bp | AAACATAGAACAGAGGACCAGAGTAGAGTACACATTTaGAAAGAGTCCTATGAATCCTGTTCCCAGGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: KHRTEDQSRVHI*KESYESCSQAK Trigger: TTTGGCCTGGGAACAGGATTCATAGGACTCTTTCCAAATGTGTACTCTACTCTGGTCCTCTGTTCTATGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117100.4 |
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