Pregenerated sensors for SLC44A5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028360Ensembl transcript IDs: ENSMUST00000089948.6, ENSMUST00000239250.2
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCCTGGGCGTGCCCATGCAAAGGAGAATCCACGGGCCTTCTGCATaGCTGTGTGAGGAAGCTCAGGGGAGGCGAGAGGTGAGGGAGGCA | + |
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Preference number: 1 (lower is better) Translates to: CLGVPMQRRIHGPSA*LCEEAQGRREVREA Trigger: TGCCTCCCTCACCTCTCGCCTCCCCTGAGCTTCCTCACACAGTCATGCAGAAGGCCCGTGGATTCTCCTTTGCATGGGCACGCCCAGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| 3UTR TCA 90 bp | CGTGCCCATGCAAAGGAGAATCCACGGGCCTTCTGCATGACTGTGTaGGGAAGCTCAGGGGAGGCGAGAGGTGAGGGAGGCAGCCATTTC | + |
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Preference number: 1 (lower is better) Translates to: RAHAKENPRAFCMTV*GSSGEARGEGGSHF Trigger: GAAATGGCTGCCTCCCTCACCTCTCGCCTCCCCTGAGCTTCCTCACACAGTCATGCAGAAGGCCCGTGGATTCTCCTTTGCATGGGCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| 3UTR GCA 90 bp | TTTCCTCCCTCACTAAAAGTCGAACTTCGACCTTGTGCCTGGGCGTaGCCATGCAAAGGAGAATCCACGGGCCTTCTGCATGACTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: FPPSLKVELRPCAWA*PCKGESTGLLHDCV Trigger: CACACAGTCATGCAGAAGGCCCGTGGATTCTCCTTTGCATGGGCACGCCCAGGCACAAGGTCGAAGTTCGACTTTTAGTGAGGGAGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| 3UTR TCA 90 bp | TCGGCTACAGGTGTTTGCACTTGGGACCGCAGTCTGCAAAGTCAATaGGGCCACTATCAAATGCCTGGTCCCTCAGATGGTACCAAGTGC | + |
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Preference number: 1 (lower is better) Translates to: SATGVCTWDRSLQSQ*GHYQMPGPSDGTKC Trigger: GCACTTGGTACCATCTGAGGGACCAGGCATTTGATAGTGGCCTCATTGACTTTGCAGACTGCGGTCCCAAGTGCAAACACCTGTAGCCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| 3UTR GCA 90 bp | AGGGCCTCTTTATACTTGGCCCAATTCTACACACAGGGAAAAGCATaGAACGCGTGCGAATCCAATTCCCACTTTTCTGCACCGTGTGAG | + |
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Preference number: 1 (lower is better) Translates to: RASLYLAQFYTQGKA*NACESNSHFSAPCE Trigger: CTCACACGGTGCAGAAAAGTGGGAATTGGATTCGCACGCGTTGCATGCTTTTCCCTGTGTGTAGAATTGGGCCAAGTATAAAGAGGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| 3UTR TCA 90 bp | TTCAGGCTGCTTTGCGTGTTGCGTGTTGCGTGTGGCACCCATTTGTaGATATCCACTAGGCACAAGGGGAATTGTTTGTATCACACAGTG | + |
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Preference number: 1 (lower is better) Translates to: FRLLCVLRVACGTHL*ISTRHKGNCLYHTV Trigger: CACTGTGTGATACAAACAATTCCCCTTGTGCCTAGTGGATATTCACAAATGGGTGCCACACGCAACACGCAACACGCAAAGCAGCCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
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| 3UTR GCA 90 bp | TTAAAACATTGTCGGCTACAGGTGTTTGCACTTGGGACCGCAGTCTaGAAAGTCAATGAGGCCACTATCAAATGCCTGGTCCCTCAGATG | + |
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Preference number: 1 (lower is better) Translates to: LKHCRLQVFALGTAV*KVNEATIKCLVPQM Trigger: CATCTGAGGGACCAGGCATTTGATAGTGGCCTCATTGACTTTGCAGACTGCGGTCCCAAGTGCAAACACCTGTAGCCGACAATGTTTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| 3UTR TCA 90 bp | CAGGACCTGCCCTTCTACAGCTTGTCACGGACTAACTCACCCACTTaGAATATGCTTTCTAGGAAACCAGGAACACAAGTTGAATCACAG | + |
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Preference number: 1 (lower is better) Translates to: QDLPFYSLSRTNSPT*NMLSRKPGTQVESQ Trigger: CTGTGATTCAACTTGTGTTCCTGGTTTCCTAGAAAGCATATTTCAAGTGGGTGAGTTAGTCCGTGACAAGCTGTAGAAGGGCAGGTCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| 3UTR GCA 90 bp | ACCAAGTGCCAGCAGAAATACTGCTCTAAAGCAACATTTTCATATTaGCGTCAACCTAATTCACAAAGCTCCTGTGTGGAGCTTCTCTAC | + |
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Preference number: 1 (lower is better) Translates to: TKCQQKYCSKATFSY*RQPNSQSSCVELLY Trigger: GTAGAGAAGCTCCACACAGGAGCTTTGTGAATTAGGTTGACGGCAATATGAAAATGTTGCTTTAGAGCAGTATTTCTGCTGGCACTTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| 3UTR GCA 90 bp | CAAATGCCTGGTCCCTCAGATGGTACCAAGTGCCAGCAGAAATACTaGTCTAAAGCAACATTTTCATATTGCCGTCAACCTAATTCACAA | + |
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Preference number: 1 (lower is better) Translates to: QMPGPSDGTKCQQKY*SKATFSYCRQPNSQ Trigger: TTGTGAATTAGGTTGACGGCAATATGAAAATGTTGCTTTAGAGCAGTATTTCTGCTGGCACTTGGTACCATCTGAGGGACCAGGCATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| 3UTR GCA 90 bp | CTTTTAGTAAAAACAAAGACAAATCCAACACATGTTCGTTCAGGCTaGTTTGCGTGTTGCGTGTTGCGTGTGGCACCCATTTGTGAATAT | + |
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Preference number: 1 (lower is better) Translates to: LLVKTKTNPTHVRSG*FACCVLRVAPICEY Trigger: ATATTCACAAATGGGTGCCACACGCAACACGCAACACGCAAAGCAGCCTGAACGAACATGTGTTGGATTTGTCTTTGTTTTTACTAAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
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| 3UTR GCA 90 bp | TGCCCTTCTACAGCTTGTCACGGACTAACTCACCCACTTGAAATATaGTTTCTAGGAAACCAGGAACACAAGTTGAATCACAGTTTTAGA | + |
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Preference number: 1 (lower is better) Translates to: CPSTACHGLTHPLEI*FLGNQEHKLNHSFR Trigger: TCTAAAACTGTGATTCAACTTGTGTTCCTGGTTTCCTAGAAAGCATATTTCAAGTGGGTGAGTTAGTCCGTGACAAGCTGTAGAAGGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| 3UTR TCA 90 bp | ATAACACAAGGATATATTTCAGACTCTCAAATGCGTGGGCTATATTaGTGGCCACACATTGCACTAATAATATATAGACAATCTGACGTG | + |
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Preference number: 1 (lower is better) Translates to: ITQGYISDSQMRGLY*WPHIALIIYRQSDV Trigger: CACGTCAGATTGTCTATATATTATTAGTGCAATGTGTGGCCATCAATATAGCCCACGCATTTGAGAGTCTGAAATATATCCTTGTGTTAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGCTCGGTCCACCTGCAGCAGGTTTAGTGCTGAGCCCACAGGACCTGCCCTTCTTGGGACCGCAGTCTaGAAAGTCAATGAGGCCACT | + |
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Preference number: 2 (lower is better) Translates to: QARSTCSRFSAEPTGPALLGTAV*KVNEAT Trigger: AGTGGCCTCATTGACTTTGCAGACTGCGGTCCCAAG...AAGGGCAGGTCCTGTGGGCTCAGCACTAAACCTGCTGCAGGTGGACCGAGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCCTGTGAAACTCCCACAGGCTTCCCCTTCAGGTATGGGTGAGACACCAGACTTGAGTGGTAAGGGCTaGAGGACTGACTGGCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: CPVKLPQASPSGMGETPDLSGKG*RTDWQL Trigger: GAGCTGCCAGTCAGTCCTTCAGCCCTTACCACTCAA...GTCTGGTGTCTCACCCATACCTGAAGGGGAAGCCTGTGGGAGTTTCACAGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
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| 3UTR-3UTR CCA 90 bp | GCCTGGGCGTGCCCATGCAAAGGAGAATCCACGGGCCTTCTGCATGACTGTGTGCCACTATCAAATGCCTaGTCCCTCAGATGGTACCAA | + |
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Preference number: 2 (lower is better) Translates to: AWACPCKGESTGLLHDCVPLSNA*SLRWYQ Trigger: TTGGTACCATCTGAGGGACCAGGCATTTGATAGTGG...CACACAGTCATGCAGAAGGCCCGTGGATTCTCCTTTGCATGGGCACGCCCAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGGAAAAGCATGCAACGCGTGCGAATCCAATTCCCACTTTTCTGCACCGTGTCCTTGTGCCTGGGCGTaGCCATGCAAAGGAGAATCC | + |
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Preference number: 2 (lower is better) Translates to: QGKACNACESNSHFSAPCPCAWA*PCKGES Trigger: GGATTCTCCTTTGCATGGGCACGCCCAGGCACAAGG...ACACGGTGCAGAAAAGTGGGAATTGGATTCGCACGCGTTGCATGCTTTTCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGGAAAAGCATGCAACGCGTGCGAATCCAATTCCCACTTTTCTGCACCGTGTGCCTGGTCCCTCAGATaGTACCAAGTGCCAGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: QGKACNACESNSHFSAPCAWSLR*YQVPAE Trigger: TTCTGCTGGCACTTGGTACCATCTGAGGGACCAGGC...ACACGGTGCAGAAAAGTGGGAATTGGATTCGCACGCGTTGCATGCTTTTCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| 3UTR-3UTR GCA 90 bp | CATGAGTCTCATTTCGATAAAACAGAGATGAGGCTCCAGGCTCGGTCCACCTGCGAGGCCACTATCAAATaGCTGGTCCCTCAGATGGTA | + |
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Preference number: 2 (lower is better) Translates to: HESHFDKTEMRLQARSTCEATIK*LVPQMV Trigger: TACCATCTGAGGGACCAGGCATTTGATAGTGGCCTC...GCAGGTGGACCGAGCCTGGAGCCTCATCTCTGTTTTATCGAAATGAGACTCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCTGCATAGCAGAGACACACTAACTACACAACCCACACCACCATGGGCTCAGTCACAGGCTACAGTGTaGGGCTTTGGTATAAGATGC | + |
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Preference number: 2 (lower is better) Translates to: FLHSRDTLTTQPTPPWAQSQATV*GFGIRC Trigger: GCATCTTATACCAAAGCCCCACACTGTAGCCTGTGA...CTGAGCCCATGGTGGTGTGGGTTGTGTAGTTAGTGTGTCTCTGCTATGCAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
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| 3UTR-3UTR CCA 90 bp | CATCCGATTTCCTCCCTCACTAAAAGTCGAACTTCGACCTTGTGCCTGGGCGTGTCAGATATTCTCAGGTaGCCAGAGCTTCACAGTAAT | + |
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Preference number: 2 (lower is better) Translates to: HPISSLTKSRTSTLCLGVSDILR*PELHSN Trigger: ATTACTGTGAAGCTCTGGCCACCTGAGAATATCTGA...CACGCCCAGGCACAAGGTCGAAGTTCGACTTTTAGTGAGGGAGGAAATCGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCTGCATAGCAGAGACACACTAACTACACAACCCACACCACCATGGGCTCAGAACAGTAGGTATTGTTaGTTGACTCTCACTGATCCC | + |
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Preference number: 2 (lower is better) Translates to: FLHSRDTLTTQPTPPWAQNSRYC*LTLTDP Trigger: GGGATCAGTGAGAGTCAATCAACAATACCTACTGTT...CTGAGCCCATGGTGGTGTGGGTTGTGTAGTTAGTGTGTCTCTGCTATGCAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
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| 3UTR-3UTR GCA 90 bp | CATGAGTCTCATTTCGATAAAACAGAGATGAGGCTCCAGGCTCGGTCCACCTGCCACCCACTTGAAATATaGTTTCTAGGAAACCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: HESHFDKTEMRLQARSTCHPLEI*FLGNQE Trigger: TTCCTGGTTTCCTAGAAAGCATATTTCAAGTGGGTG...GCAGGTGGACCGAGCCTGGAGCCTCATCTCTGTTTTATCGAAATGAGACTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| 3UTR-3UTR CCA 90 bp | CATCCGATTTCCTCCCTCACTAAAAGTCGAACTTCGACCTTGTGCCTGGGCGTGTTCAGTACCATATGCTaGTCAACTACAACTCAATAT | + |
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Preference number: 2 (lower is better) Translates to: HPISSLTKSRTSTLCLGVFSTIC*STTTQY Trigger: ATATTGAGTTGTAGTTGACCAGCATATGGTACTGAA...CACGCCCAGGCACAAGGTCGAAGTTCGACTTTTAGTGAGGGAGGAAATCGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGTTCTATGTAGGAAGATGCCATACCACCATTCTAAATCTAGGTTCGCACACGGGCCTCTTTATACTTaGCCCAATTCTACACACAGG | + |
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Preference number: 2 (lower is better) Translates to: LVLCRKMPYHHSKSRFAHGPLYT*PNSTHR Trigger: CCTGTGTGTAGAATTGGGCCAAGTATAAAGAGGCCC...GTGTGCGAACCTAGATTTAGAATGGTGGTATGGCATCTTCCTACATAGAACCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| 3UTR-3UTR TCA 90 bp | GGAATTGTTTGTATCACACAGTGTACTCCTTTGATGAGGAGGATATCAAAGGTATTAACAATCCCCTTGTaGCTTCTGATGGCTTCACAG | + |
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Preference number: 2 (lower is better) Translates to: GIVCITQCTPLMRRISKVLTIPL*LLMASQ Trigger: CTGTGAAGCCATCAGAAGTCACAAGGGGATTGTTAA...TACCTTTGATATCCTCCTCATCAAAGGAGTACACTGTGTGATACAAACAATTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
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| 3UTR-3UTR TCA 90 bp | CTGGTTCTATGTAGGAAGATGCCATACCACCATTCTAAATCTAGGTTCGCACACACTAACTCACCCACTTaGAATATGCTTTCTAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: LVLCRKMPYHHSKSRFAHTNSPT*NMLSRK Trigger: TTTCCTAGAAAGCATATTTCAAGTGGGTGAGTTAGT...GTGTGCGAACCTAGATTTAGAATGGTGGTATGGCATCTTCCTACATAGAACCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| 3UTR-3UTR CCA 90 bp | TTTAGAAAGTTGTTCACCGGCTTCAACAGTAACTATAACCATAGCAGCATATTTACAGGTGTTTGCACTTaGGACCGCAGTCTGCAAAGT | + |
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Preference number: 2 (lower is better) Translates to: FRKLFTGFNSNYNHSSIFTGVCT*DRSLQS Trigger: ACTTTGCAGACTGCGGTCCCAAGTGCAAACACCTGT...AAATATGCTGCTATGGTTATAGTTACTGTTGAAGCCGGTGAACAACTTTCTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| 3UTR-3UTR TCA 90 bp | GCTAGCTACAGGCTCACTATATGTCACCATTGCCATAGATTTTTATTGAGGTCCACCAGGAACACAAGTTaGATCACAGTTTTAGAAAGT | + |
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Preference number: 2 (lower is better) Translates to: ASYRLTICHHCHRFLLRSTRNTS*ITVLES Trigger: ACTTTCTAAAACTGTGATTCAACTTGTGTTCCTGGT...GGACCTCAATAAAAATCTATGGCAATGGTGACATATAGTGAGCCTGTAGCTAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| 3UTR-3UTR GCA 90 bp | CAGTGGGAGCTTTTTGGTATAAAGGTATCTAAAGTGAGTTTTCAACAAACCATCGGCTTTGGTATAAGATaGAAAAGCAAGCCAGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: QWELFGIKVSKVSFQQTIGFGIR*KSKPAR Trigger: CCTTGCTGGCTTGCTTTTGCATCTTATACCAAAGCC...GATGGTTTGTTGAAAACTCACTTTAGATACCTTTATACCAAAAAGCTCCCACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
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| 3UTR-3UTR GCA 90 bp | TTTAGAAAGTTGTTCACCGGCTTCAACAGTAACTATAACCATAGCAGCATATTTTCAGATGGTACCAAGTaGCAGCAGAAATACTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: FRKLFTGFNSNYNHSSIFSDGTK*QQKYCS Trigger: AGAGCAGTATTTCTGCTGGCACTTGGTACCATCTGA...AAATATGCTGCTATGGTTATAGTTACTGTTGAAGCCGGTGAACAACTTTCTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| 3UTR-3UTR GCA 90 bp | TCACCGGCTTCAACAGTAACTATAACCATAGCAGCATATTTACAAATTCAGTACTGCCAGCAGAAATACTaGTCTAAAGCAACATTTTCA | + |
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Preference number: 2 (lower is better) Translates to: SPASTVTITIAAYLQIQYCQQKY*SKATFS Trigger: TGAAAATGTTGCTTTAGAGCAGTATTTCTGCTGGCA...GTACTGAATTTGTAAATATGCTGCTATGGTTATAGTTACTGTTGAAGCCGGTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| 3UTR TCA 72 bp | GTGCCCATGCAAAGGAGAATCCACGGGCCTTCTGCATaGCTGTGTGAGGAAGCTCAGGGGAGGCGAGAGGTG | + |
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Preference number: 3 (lower is better) Translates to: VPMQRRIHGPSA*LCEEAQGRREV Trigger: CACCTCTCGCCTCCCCTGAGCTTCCTCACACAGTCATGCAGAAGGCCCGTGGATTCTCCTTTGCATGGGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| 3UTR GCA 72 bp | CCAGCCCAGCACACAGCTTCCCCTCAGAGGGAAAGTTaGCCTGTGAAACTCCCACAGGCTTCCCCTTCAGGT | + |
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Preference number: 3 (lower is better) Translates to: PAQHTASPQRES*PVKLPQASPSG Trigger: ACCTGAAGGGGAAGCCTGTGGGAGTTTCACAGGGCAACTTTCCCTCTGAGGGGAAGCTGTGTGCTGGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
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| 3UTR-3UTR CAA 90 bp | CAGGCTCGGTCCACCTGCAGCAGGTTTAGTGCTGAGCCCACAGGACCTGCCCTTTACAGGTGTTTGCACTaGGGACCGCAGTCTGCAAAG | + |
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Preference number: 3 (lower is better) Translates to: QARSTCSRFSAEPTGPALYRCLH*GPQSAK Trigger: CTTTGCAGACTGCGGTCCCAAGTGCAAACACCTGTA...AAGGGCAGGTCCTGTGGGCTCAGCACTAAACCTGCTGCAGGTGGACCGAGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| 3UTR CCA 72 bp | GAACGTCCCCAACCAAAGCACTACGGGAAGGTGTGTTaGACGGATACAGTGTGGGAGGCGACACAGGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: ERPQPKHYGKVC*TDTVWEATQAA Trigger: TGCTGCCTGTGTCGCCTCCCACACTGTATCCGTCCAACACACCTTCCCGTAGTGCTTTGGTTGGGGACGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
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| 3UTR CCA 72 bp | AGCAGAGACACACTAACTACACAACCCACACCACCATaGGCTCAGCAGAGCCCAAACCACCAGGCGTGGCGT | + |
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Preference number: 3 (lower is better) Translates to: SRDTLTTQPTPP*AQQSPNHQAWR Trigger: ACGCCACGCCTGGTGGTTTGGGCTCTGCTGAGCCCATGGTGGTGTGGGTTGTGTAGTTAGTGTGTCTCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
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| 3UTR GCA 72 bp | TCAGGGGAGGCGAGAGGTGAGGGAGGCAGCCATTTCTaGTCTGTTCAGATATTCTCAGGTGGCCAGAGCTTC | + |
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Preference number: 3 (lower is better) Translates to: SGEARGEGGSHF*SVQIFSGGQSF Trigger: GAAGCTCTGGCCACCTGAGAATATCTGAACAGAGCAGAAATGGCTGCCTCCCTCACCTCTCGCCTCCCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| 3UTR GCA 72 bp | AAAGTCGAACTTCGACCTTGTGCCTGGGCGTGCCCATaGAAAGGAGAATCCACGGGCCTTCTGCATGACTGT | + |
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Preference number: 3 (lower is better) Translates to: KVELRPCAWACP*KGESTGLLHDC Trigger: ACAGTCATGCAGAAGGCCCGTGGATTCTCCTTTGCATGGGCACGCCCAGGCACAAGGTCGAAGTTCGACTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| 3UTR TCA 72 bp | ATGCAAAGACCAAAGCGGGTGGTCCGCTTAACCCGTTaGCTGTCAAACAGGAGGCGGGGAAGGGCCTTAAAA | + |
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Preference number: 3 (lower is better) Translates to: MQRPKRVVRLTR*LSNRRRGRALK Trigger: TTTTAAGGCCCTTCCCCGCCTCCTGTTTGACAGTCAACGGGTTAAGCGGACCACCCGCTTTGGTCTTTGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
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| 3UTR TCA 72 bp | AGCCCTGGGGCTGTGGTGATGCAAGAACTCTTGATCTaGAACATGCATAGCCCCAGGAAGCACCAGAAGCGA | + |
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Preference number: 3 (lower is better) Translates to: SPGAVVMQELLI*NMHSPRKHQKR Trigger: TCGCTTCTGGTGCTTCCTGGGGCTATGCATGTTTCAGATCAAGAGTTCTTGCATCACCACAGCCCCAGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| 3UTR GCA 72 bp | TCACTAAAAGTCGAACTTCGACCTTGTGCCTGGGCGTaGCCATGCAAAGGAGAATCCACGGGCCTTCTGCAT | + |
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Preference number: 3 (lower is better) Translates to: SLKVELRPCAWA*PCKGESTGLLH Trigger: ATGCAGAAGGCCCGTGGATTCTCCTTTGCATGGGCACGCCCAGGCACAAGGTCGAAGTTCGACTTTTAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| 3UTR GCA 72 bp | ATTTCCTCCCTCACTAAAAGTCGAACTTCGACCTTGTaGCTGGGCGTGCCCATGCAAAGGAGAATCCACGGG | + |
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Preference number: 3 (lower is better) Translates to: ISSLTKSRTSTL*LGVPMQRRIHG Trigger: CCCGTGGATTCTCCTTTGCATGGGCACGCCCAGGCACAAGGTCGAAGTTCGACTTTTAGTGAGGGAGGAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| 3UTR TCA 72 bp | AGGTCTGTCCACTTGCTCACAAGATCCGGGAAGTACTaGCCAGCCAGGAAGGCACTGAGAGAATTGAGTGGT | + |
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Preference number: 3 (lower is better) Translates to: RSVHLLTRSGKY*PARKALRELSG Trigger: ACCACTCAATTCTCTCAGTGCCTTCCTGGCTGGTCAGTACTTCCCGGATCTTGTGAGCAAGTGGACAGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
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| 3UTR TCA 72 bp | GGTGTTTGCACTTGGGACCGCAGTCTGCAAAGTCAATaGGGCCACTATCAAATGCCTGGTCCCTCAGATGGT | + |
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Preference number: 3 (lower is better) Translates to: GVCTWDRSLQSQ*GHYQMPGPSDG Trigger: ACCATCTGAGGGACCAGGCATTTGATAGTGGCCTCATTGACTTTGCAGACTGCGGTCCCAAGTGCAAACACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| 3UTR GCA 72 bp | TGTCGGCTACAGGTGTTTGCACTTGGGACCGCAGTCTaGAAAGTCAATGAGGCCACTATCAAATGCCTGGTC | + |
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Preference number: 3 (lower is better) Translates to: CRLQVFALGTAV*KVNEATIKCLV Trigger: GACCAGGCATTTGATAGTGGCCTCATTGACTTTGCAGACTGCGGTCCCAAGTGCAAACACCTGTAGCCGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| 3UTR TCA 72 bp | CGCGTGCGAATCCAATTCCCACTTTTCTGCACCGTGTaGGATTTAGGCATGGCCACAACAAACCAGCTTCCA | + |
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Preference number: 3 (lower is better) Translates to: RVRIQFPLFCTV*DLGMATTNQLP Trigger: TGGAAGCTGGTTTGTTGTGGCCATGCCTAAATCTCACACGGTGCAGAAAAGTGGGAATTGGATTCGCACGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| 3UTR GCA 72 bp | GCCCAATTCTACACACAGGGAAAAGCATGCAACGCGTaGGAATCCAATTCCCACTTTTCTGCACCGTGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: AQFYTQGKACNA*ESNSHFSAPCE Trigger: CTCACACGGTGCAGAAAAGTGGGAATTGGATTCGCACGCGTTGCATGCTTTTCCCTGTGTGTAGAATTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| 3UTR TCA 72 bp | CAACCAAGCATGAGTCTCATTTCGATAAAACAGAGATaGGGCTCCAGGCTCGGTCCACCTGCAGCAGGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: QPSMSLISIKQR*GSRLGPPAAGL Trigger: TAAACCTGCTGCAGGTGGACCGAGCCTGGAGCCTCATCTCTGTTTTATCGAAATGAGACTCATGCTTGGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| 3UTR GCA 72 bp | CCCCTTCAGGTATGGGTGAGACACCAGACGTGTGCATaGCGACCCATATTTCAAAGGAACCGCTATAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: PLQVWVRHQTCA*RPIFQRNRYRK Trigger: TTTTCTATAGCGGTTCCTTTGAAATATGGGTCGGCATGCACACGTCTGGTGTCTCACCCATACCTGAAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| 3UTR CCA 72 bp | AGGCAGCCATTTCTGCTCTGTTCAGATATTCTCAGGTaGCCAGAGCTTCACAGTAATGGAGAGGTTATCCCC | + |
|
Preference number: 3 (lower is better) Translates to: RQPFLLCSDILR*PELHSNGEVIP Trigger: GGGGATAACCTCTCCATTACTGTGAAGCTCTGGCCACCTGAGAATATCTGAACAGAGCAGAAATGGCTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| 3UTR CCA 72 bp | GCATGGCCACAACAAACCAGCTTCCATTCTAAGCCCTaGGGCTGTGGTGATGCAAGAACTCTTGATCTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: AWPQQTSFHSKP*GCGDARTLDLK Trigger: TTTCAGATCAAGAGTTCTTGCATCACCACAGCCCCAGGGCTTAGAATGGAAGCTGGTTTGTTGTGGCCATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCCCTGTGAAACTCCCACAGGCTTCCCCTTCAGGTATGGGTGAGACACCAGACTGTCATCACTCAGCATaGCAGGGTTTAAAGTTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: CPVKLPQASPSGMGETPDCHHSA*QGLKFN Trigger: ATTAAACTTTAAACCCTGCAATGCTGAGTGATGACA...GTCTGGTGTCTCACCCATACCTGAAGGGGAAGCCTGTGGGAGTTTCACAGGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| 3UTR-3UTR CAA 90 bp | CATGAGTCTCATTTCGATAAAACAGAGATGAGGCTCCAGGCTCGGTCCACCTGCCACAGTTTTAGAAAGTaGTTCACCGGCTTCAACAGT | + |
|
Preference number: 3 (lower is better) Translates to: HESHFDKTEMRLQARSTCHSFRK*FTGFNS Trigger: ACTGTTGAAGCCGGTGAACAACTTTCTAAAACTGTG...GCAGGTGGACCGAGCCTGGAGCCTCATCTCTGTTTTATCGAAATGAGACTCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| 3UTR TCA 72 bp | CTTTGCGTGTTGCGTGTTGCGTGTGGCACCCATTTGTaGATATCCACTAGGCACAAGGGGAATTGTTTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: LCVLRVACGTHL*ISTRHKGNCLY Trigger: ATACAAACAATTCCCCTTGTGCCTAGTGGATATTCACAAATGGGTGCCACACGCAACACGCAACACGCAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| 3UTR GCA 72 bp | TTATACTTGGCCCAATTCTACACACAGGGAAAAGCATaGAACGCGTGCGAATCCAATTCCCACTTTTCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: LYLAQFYTQGKA*NACESNSHFSA Trigger: TGCAGAAAAGTGGGAATTGGATTCGCACGCGTTGCATGCTTTTCCCTGTGTGTAGAATTGGGCCAAGTATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| 3UTR GCA 72 bp | CCTGCAGCTAGCTACAGGCTCACTATATGTCACCATTaGCATAGATTTTTATTGAGGTCCTTGCATGGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: PAASYRLTICHH*HRFLLRSLHGC Trigger: ACAGCCATGCAAGGACCTCAATAAAAATCTATGGCAATGGTGACATATAGTGAGCCTGTAGCTAGCTGCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| 3UTR TCA 72 bp | CCCTTCTACAGCTTGTCACGGACTAACTCACCCACTTaGAATATGCTTTCTAGGAAACCAGGAACACAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: PFYSLSRTNSPT*NMLSRKPGTQV Trigger: AACTTGTGTTCCTGGTTTCCTAGAAAGCATATTTCAAGTGGGTGAGTTAGTCCGTGACAAGCTGTAGAAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| 3UTR GCA 72 bp | CAGCAGAAATACTGCTCTAAAGCAACATTTTCATATTaGCGTCAACCTAATTCACAAAGCTCCTGTGTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: QQKYCSKATFSY*RQPNSQSSCVE Trigger: CTCCACACAGGAGCTTTGTGAATTAGGTTGACGGCAATATGAAAATGTTGCTTTAGAGCAGTATTTCTGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| 3UTR-3UTR CAA 90 bp | CACAAGGATATATTTCAGACTCTCAAATGCGTGGGCTATATTGATGGCCACACAAAAGTTATTAAAACATaGTCGGCTACAGGTGTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: HKDIFQTLKCVGYIDGHTKVIKT*SATGVC Trigger: GCAAACACCTGTAGCCGACAATGTTTTAATAACTTT...TGTGTGGCCATCAATATAGCCCACGCATTTGAGAGTCTGAAATATATCCTTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| 3UTR GCA 72 bp | AAAACCTTCTGGAATTACTGGTTCTATGTAGGAAGATaGCATACCACCATTCTAAATCTAGGTTCGCACACT | + |
|
Preference number: 3 (lower is better) Translates to: KTFWNYWFYVGR*HTTILNLGSHT Trigger: AGTGTGCGAACCTAGATTTAGAATGGTGGTATGGCATCTTCCTACATAGAACCAGTAATTCCAGAAGGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| 3UTR TCA 72 bp | GGATATATTTCAGACTCTCAAATGCGTGGGCTATATTaGTGGCCACACATTGCACTAATAATATATAGACAA | + |
|
Preference number: 3 (lower is better) Translates to: GYISDSQMRGLY*WPHIALIIYRQ Trigger: TTGTCTATATATTATTAGTGCAATGTGTGGCCATCAATATAGCCCACGCATTTGAGAGTCTGAAATATATCC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGTGTGTTGGACGGATACAGTGTGGGAGGCGACACAGGCAGCAGGATATGGTCACCCTGGCTGCTaGGGGGCTTTCTCTTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GKVCWTDTVWEATQAAGYGHPGC*GAFSSG Trigger: CCCGGAAGAGAAAGCCCCCCAGCAGCCAGGGTGACC...ATATCCTGCTGCCTGTGTCGCCTCCCACACTGTATCCGTCCAACACACCTTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| CDS-3UTR CCA 90 bp | GCACTACGGGAAGGTGTGTTGGACGGATACAGTGTGGGAGGCGACACAGGCAGCTTCCTGGGGTCACCATaGGCCCAAGCCAAGAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALREGVLDGYSVGGDTGSFLGSP*AQAKSP Trigger: AGGACTCTTGGCTTGGGCCCATGGTGACCCCAGGAA...GCTGCCTGTGTCGCCTCCCACACTGTATCCGTCCAACACACCTTCCCGTAGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| 3UTR CAA 72 bp | CGAACGTCCCCAACCAAAGCACTACGGGAAGGTGTGTaGGACGGATACAGTGTGGGAGGCGACACAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RTSPTKALREGV*DGYSVGGDTGS Trigger: GCTGCCTGTGTCGCCTCCCACACTGTATCCGTCCAACACACCTTCCCGTAGTGCTTTGGTTGGGGACGTTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| 3UTR CAA 72 bp | TCCAGCCCAGCACACAGCTTCCCCTCAGAGGGAAAGTaGCCCTGTGAAACTCCCACAGGCTTCCCCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSPAHSFPSEGK*PCETPTGFPFR Trigger: CCTGAAGGGGAAGCCTGTGGGAGTTTCACAGGGCAACTTTCCCTCTGAGGGGAAGCTGTGTGCTGGGCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| CDS-3UTR CCA 90 bp | GCCTGGGCGTGCCCATGCAAAGGAGAATCCACGGGCCTTCTGCATGACTGTGTGCCACAGGCTTGGCCTTaGCCTTGCAGAATTGGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: AWACPCKGESTGLLHDCVPQAWP*PCRIGD Trigger: ATCGCCAATTCTGCAAGGCCAAGGCCAAGCCTGTGG...CACACAGTCATGCAGAAGGCCCGTGGATTCTCCTTTGCATGGGCACGCCCAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| CDS-3UTR TCA 90 bp | GGGAAGGTGTGTTGGACGGATACAGTGTGGGAGGCGACACAGGCAGCAGGATATGACTGTGGCCTCTGCTaGATGCTGCTGTACTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GKVCWTDTVWEATQAAGYDCGLC*MLLYSR Trigger: TCTGGAGTACAGCAGCATTCAGCAGAGGCCACAGTC...ATATCCTGCTGCCTGTGTCGCCTCCCACACTGTATCCGTCCAACACACCTTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| CDS-3UTR CCA 90 bp | TGCCCTGTGAAACTCCCACAGGCTTCCCCTTCAGGTATGGGTGAGACACCAGACGATAGGCCATTTTCCTaGGGTCACCATGGGCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: CPVKLPQASPSGMGETPDDRPFS*GHHGPK Trigger: CTTGGGCCCATGGTGACCCCAGGAAAATGGCCTATC...GTCTGGTGTCTCACCCATACCTGAAGGGGAAGCCTGTGGGAGTTTCACAGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| CDS-3UTR CCA 90 bp | AGCACTACGGGAAGGTGTGTTGGACGGATACAGTGTGGGAGGCGACACAGGCAGATCTCTCTGGGCACCTaGAGACACAGATCTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: STTGRCVGRIQCGRRHRQISLGT*RHRSVW Trigger: CCACACAGATCTGTGTCTCCAGGTGCCCAGAGAGAT...CTGCCTGTGTCGCCTCCCACACTGTATCCGTCCAACACACCTTCCCGTAGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| CDS-3UTR CCA 90 bp | TTCCTGCATAGCAGAGACACACTAACTACACAACCCACACCACCATGGGCTCAGTGGGTCATACCTCCTTaGGTCACCCTGGCTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLHSRDTLTTQPTPPWAQWVIPP*VTLAAG Trigger: CCCAGCAGCCAGGGTGACCCAAGGAGGTATGACCCA...CTGAGCCCATGGTGGTGTGGGTTGTGTAGTTAGTGTGTCTCTGCTATGCAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| CDS-3UTR CCA 90 bp | TGCCCTGTGAAACTCCCACAGGCTTCCCCTTCAGGTATGGGTGAGACACCAGACCTGTCTTGTTCTCATTaGGGGTTCCCTTCTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CPVKLPQASPSGMGETPDLSCSH*GFPSGH Trigger: GTGGCCAGAAGGGAACCCCCAATGAGAACAAGACAG...GTCTGGTGTCTCACCCATACCTGAAGGGGAAGCCTGTGGGAGTTTCACAGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| 3UTR CAA 72 bp | GATGCAAAGACCAAAGCGGGTGGTCCGCTTAACCCGTaGACTGTCAAACAGGAGGCGGGGAAGGGCCTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: DAKTKAGGPLNP*TVKQEAGKGLK Trigger: TTTAAGGCCCTTCCCCGCCTCCTGTTTGACAGTCAACGGGTTAAGCGGACCACCCGCTTTGGTCTTTGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| CDS-3UTR GCA 90 bp | AGCACTACGGGAAGGTGTGTTGGACGGATACAGTGTGGGAGGCGACACAGGCAGGCCTCTGCTGAATGCTaGTGTACTCCAGAAAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: STTGRCVGRIQCGRRHRQASAEC*CTPENS Trigger: ACTGTTTTCTGGAGTACAGCAGCATTCAGCAGAGGC...CTGCCTGTGTCGCCTCCCACACTGTATCCGTCCAACACACCTTCCCGTAGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| 3UTR CAA 72 bp | CCGATTTCCTCCCTCACTAAAAGTCGAACTTCGACCTaGTGCCTGGGCGTGCCCATGCAAAGGAGAATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PISSLTKSRTST*CLGVPMQRRIH Trigger: GTGGATTCTCCTTTGCATGGGCACGCCCAGGCACAAGGTCGAAGTTCGACTTTTAGTGAGGGAGGAAATCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| CDS-3UTR TCA 90 bp | CAGGCTCGGTCCACCTGCAGCAGGTTTAGTGCTGAGCCCACAGGACCTGCCCTTTCAGAATGTTTCTCATaGGCAGATAGAAAGCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: QARSTCSRFSAEPTGPALSECFS*ADRKHL Trigger: GAGATGCTTTCTATCTGCTCATGAGAAACATTCTGA...AAGGGCAGGTCCTGTGGGCTCAGCACTAAACCTGCTGCAGGTGGACCGAGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| CDS-3UTR TCA 90 bp | GCACTACGGGAAGGTGTGTTGGACGGATACAGTGTGGGAGGCGACACAGGCAGCCAAGATGATCATCATTaGAAACCAGGTCTCCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ALREGVLDGYSVGGDTGSQDDHH*KPGLLQ Trigger: TTGAAGGAGACCTGGTTTTCAATGATGATCATCTTG...GCTGCCTGTGTCGCCTCCCACACTGTATCCGTCCAACACACCTTCCCGTAGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| CDS-3UTR CCA 90 bp | CATGAGTCTCATTTCGATAAAACAGAGATGAGGCTCCAGGCTCGGTCCACCTGCATCTCTCTGGGCACCTaGAGACACAGATCTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HESHFDKTEMRLQARSTCISLGT*RHRSVW Trigger: CCACACAGATCTGTGTCTCCAGGTGCCCAGAGAGAT...GCAGGTGGACCGAGCCTGGAGCCTCATCTCTGTTTTATCGAAATGAGACTCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| CDS-3UTR CCA 90 bp | CACAGGGAAAAGCATGCAACGCGTGCGAATCCAATTCCCACTTTTCTGCACCGTAGGATGATGGCCACTTaGATCCGAGTCCTGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HREKHATRANPIPTFLHRRMMAT*IRVLRK Trigger: CTTCCTCAGGACTCGGATCCAAGTGGCCATCATCCT...ACGGTGCAGAAAAGTGGGAATTGGATTCGCACGCGTTGCATGCTTTTCCCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTGCATAGCAGAGACACACTAACTACACAACCCACACCACCATGGGCTCAGTTGGCAGTAGGTCCCTaGAAATCTGGGTCATACCTC | + |
|
Preference number: 4 (lower is better) Translates to: FLHSRDTLTTQPTPPWAQLAVGP*KSGSYL Trigger: GAGGTATGACCCAGATTTCCAGGGACCTACTGCCAA...CTGAGCCCATGGTGGTGTGGGTTGTGTAGTTAGTGTGTCTCTGCTATGCAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| CDS-3UTR CCA 90 bp | CATGAGTCTCATTTCGATAAAACAGAGATGAGGCTCCAGGCTCGGTCCACCTGCCTTCATCCTACTTCCTaGCGTCCAGGTACCATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HESHFDKTEMRLQARSTCLHPTS*RPGTIE Trigger: CTCAATGGTACCTGGACGCCAGGAAGTAGGATGAAG...GCAGGTGGACCGAGCCTGGAGCCTCATCTCTGTTTTATCGAAATGAGACTCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCTCGGTCCACCTGCAGCAGGTTTAGTGCTGAGCCCACAGGACCTGCCCTTATAAGGAAAAATCTCTaGGTCACAAGTTTCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QARSTCSRFSAEPTGPALIRKNL*VTSFIF Trigger: GAAGATGAAACTTGTGACCCAGAGATTTTTCCTTAT...AAGGGCAGGTCCTGTGGGCTCAGCACTAAACCTGCTGCAGGTGGACCGAGCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| CDS-3UTR TCA 90 bp | TTCCTGCATAGCAGAGACACACTAACTACACAACCCACACCACCATGGGCTCAGATACATCCAGAACGTTaGCTGTGGCCTCTGCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FLHSRDTLTTQPTPPWAQIHPER*LWPLLN Trigger: ATTCAGCAGAGGCCACAGTCAACGTTCTGGATGTAT...CTGAGCCCATGGTGGTGTGGGTTGTGTAGTTAGTGTGTCTCTGCTATGCAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| CDS-3UTR CCA 90 bp | TCTAAAGCAACATTTTCATATTGCCGTCAACCTAATTCACAAAGCTCCTGTGTGGACCCGGACGCTTCTTaGTCAGGATGCTGTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SKATFSYCRQPNSQSSCVDPDAS*SGCCAG Trigger: GCCTGCACAGCATCCTGACCAAGAAGCGTCCGGGTC...CACACAGGAGCTTTGTGAATTAGGTTGACGGCAATATGAAAATGTTGCTTTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| CDS-3UTR TCA 90 bp | CAGGGAAAAGCATGCAACGCGTGCGAATCCAATTCCCACTTTTCTGCACCGTGTCAAGATGATCATCATTaGAAACCAGGTCTCCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QGKACNACESNSHFSAPCQDDHH*KPGLLQ Trigger: TTGAAGGAGACCTGGTTTTCAATGATGATCATCTTG...ACACGGTGCAGAAAAGTGGGAATTGGATTCGCACGCGTTGCATGCTTTTCCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| CDS-3UTR TCA 90 bp | GCCACTGCTCTGAACCTTCATCCGATTTCCTCCCTCACTAAAAGTCGAACTTCGCAATGGCAGACAAGATaGTCATCATTGAAAACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ATALNLHPISSLTKSRTSQWQTR*SSLKTR Trigger: CCTGGTTTTCAATGATGATCATCTTGTCTGCCATTG...CGAAGTTCGACTTTTAGTGAGGGAGGAAATCGGATGAAGGTTCAGAGCAGTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| CDS-3UTR CCA 90 bp | GTTTGTATCACACAGTGTACTCCTTTGATGAGGAGGATATCAAAGGTAGTGTCACCACAGGCTTGGCCTTaGCCTTGCAGAATTGGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: VCITQCTPLMRRISKVVSPQAWP*PCRIGD Trigger: ATCGCCAATTCTGCAAGGCCAAGGCCAAGCCTGTGG...TGACACTACCTTTGATATCCTCCTCATCAAAGGAGTACACTGTGTGATACAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| CDS-3UTR CCA 90 bp | GCTAGCTACAGGCTCACTATATGTCACCATTGCCATAGATTTTTATTGAGGTCCGAGTCTCCACAGGCTTaGCCTTGGCCTTGCAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: ASYRLTICHHCHRFLLRSESPQA*PWPCRI Trigger: AATTCTGCAAGGCCAAGGCCAAGCCTGTGGAGACTC...GGACCTCAATAAAAATCTATGGCAATGGTGACATATAGTGAGCCTGTAGCTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| CDS-3UTR TCA 90 bp | CTGGTTCTATGTAGGAAGATGCCATACCACCATTCTAAATCTAGGTTCGCACACGGTACCATTGAGGGCTaGAAGGTCAGGTATACATCT | + |
|
Preference number: 4 (lower is better) Translates to: LVLCRKMPYHHSKSRFAHGTIEG*KVRYTS Trigger: AGATGTATACCTGACCTTTCAGCCCTCAATGGTACC...GTGTGCGAACCTAGATTTAGAATGGTGGTATGGCATCTTCCTACATAGAACCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| CDS-3UTR GCA 90 bp | GCTAGCTACAGGCTCACTATATGTCACCATTGCCATAGATTTTTATTGAGGTCCTTGGTCAGGATGCTGTaGAGGCTGGGTGTTACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ASYRLTICHHCHRFLLRSLVRML*RLGVTK Trigger: CTTTGTAACACCCAGCCTGCACAGCATCCTGACCAA...GGACCTCAATAAAAATCTATGGCAATGGTGACATATAGTGAGCCTGTAGCTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| CDS-3UTR CCA 90 bp | ACCCTGCAGCTAGCTACAGGCTCACTATATGTCACCATTGCCATAGATTTTTATTTGGCAGTAGGTCCCTaGAAATCTGGGTCATACCTC | + |
|
Preference number: 4 (lower is better) Translates to: TLQLATGSLYVTIAIDFYLAVGP*KSGSYL Trigger: GAGGTATGACCCAGATTTCCAGGGACCTACTGCCAA...ATAAAAATCTATGGCAATGGTGACATATAGTGAGCCTGTAGCTAGCTGCAGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| CDS-3UTR CCA 90 bp | GGGAATTGTTTGTATCACACAGTGTACTCCTTTGATGAGGAGGATATCAAAGGTGAGTCTCCACAGGCTTaGCCTTGGCCTTGCAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: GNCLYHTVYSFDEEDIKGESPQA*PWPCRI Trigger: AATTCTGCAAGGCCAAGGCCAAGCCTGTGGAGACTC...ACCTTTGATATCCTCCTCATCAAAGGAGTACACTGTGTGATACAAACAATTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| CDS-3UTR TCA 90 bp | CTGGTTCTATGTAGGAAGATGCCATACCACCATTCTAAATCTAGGTTCGCACACTGTTCTGAGCCTTTTTaGGTCTCCTGTCCAGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: LVLCRKMPYHHSKSRFAHCSEPF*VSCPGI Trigger: AATACCTGGACAGGAGACTCAAAAAGGCTCAGAACA...GTGTGCGAACCTAGATTTAGAATGGTGGTATGGCATCTTCCTACATAGAACCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| CDS-3UTR GCA 90 bp | GTTTGTATCACACAGTGTACTCCTTTGATGAGGAGGATATCAAAGGTAGTGTCACATAGAAAGCAAAGTTaGACGATGCACCGGGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VCITQCTPLMRRISKVVSHRKQS*TMHRGS Trigger: ACTGCCCCGGTGCATCGTGCAACTTTGCTTTCTATG...TGACACTACCTTTGATATCCTCCTCATCAAAGGAGTACACTGTGTGATACAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| CDS-3UTR GCA 90 bp | AAGTGCCAGCAGAAATACTGCTCTAAAGCAACATTTTCATATTGCCGTCAACCTCATAGAAAGCAAAGTTaGACGATGCACCGGGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KCQQKYCSKATFSYCRQPHRKQS*TMHRGS Trigger: ACTGCCCCGGTGCATCGTGCAACTTTGCTTTCTATG...AGGTTGACGGCAATATGAAAATGTTGCTTTAGAGCAGTATTTCTGCTGGCACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| CDS-3UTR GCA 90 bp | TCTAAAGCAACATTTTCATATTGCCGTCAACCTAATTCACAAAGCTCCTGTGTGGCTTCTTGGTCAGGATaGTGTGCAGGCTGGGTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: SKATFSYCRQPNSQSSCVASWSG*CAGWVL Trigger: TAACACCCAGCCTGCACAGCATCCTGACCAAGAAGC...CACACAGGAGCTTTGTGAATTAGGTTGACGGCAATATGAAAATGTTGCTTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| CDS-3UTR CCA 90 bp | TCTAAAGCAACATTTTCATATTGCCGTCAACCTAATTCACAAAGCTCCTGTGTGCTGTCTTGTTCTCATTaGGGGTTCCCTTCTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SKATFSYCRQPNSQSSCVLSCSH*GFPSGH Trigger: GTGGCCAGAAGGGAACCCCCAATGAGAACAAGACAG...CACACAGGAGCTTTGTGAATTAGGTTGACGGCAATATGAAAATGTTGCTTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| CDS-3UTR CCA 90 bp | GTTTGTATCACACAGTGTACTCCTTTGATGAGGAGGATATCAAAGGTAGTGTCACTTCATCCTACTTCCTaGCGTCCAGGTACCATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VCITQCTPLMRRISKVVSLHPTS*RPGTIE Trigger: CTCAATGGTACCTGGACGCCAGGAAGTAGGATGAAG...TGACACTACCTTTGATATCCTCCTCATCAAAGGAGTACACTGTGTGATACAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| CDS-3UTR TCA 90 bp | ACCCTGCAGCTAGCTACAGGCTCACTATATGTCACCATTGCCATAGATTTTTATATGTTTACTCTCCTCTaGATCCCGAAGCCATACATC | + |
|
Preference number: 4 (lower is better) Translates to: TLQLATGSLYVTIAIDFYMFTLL*IPKPYI Trigger: GATGTATGGCTTCGGGATTCAGAGGAGAGTAAACAT...ATAAAAATCTATGGCAATGGTGACATATAGTGAGCCTGTAGCTAGCTGCAGGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| CDS-3UTR GCA 90 bp | CACAAGGATATATTTCAGACTCTCAAATGCGTGGGCTATATTGATGGCCACACATCAGGTATACATCTCTaGAGAAAAGGTCTGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HKDIFQTLKCVGYIDGHTSGIHL*RKGLLG Trigger: CCCAAGCAGACCTTTTCTGCAGAGATGTATACCTGA...TGTGTGGCCATCAATATAGCCCACGCATTTGAGAGTCTGAAATATATCCTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| CDS-3UTR CCA 90 bp | ATATGCTTTCTAGGAAACCAGGAACACAAGTTGAATCACAGTTTTAGAAAGTTGGATAGGCCATTTTCCTaGGGTCACCATGGGCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ICFLGNQEHKLNHSFRKLDRPFS*GHHGPK Trigger: CTTGGGCCCATGGTGACCCCAGGAAAATGGCCTATC...CAACTTTCTAAAACTGTGATTCAACTTGTGTTCCTGGTTTCCTAGAAAGCATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGGGAGCTTTTTGGTATAAAGGTATCTAAAGTGAGTTTTCAACAAACCATCAGGATGATGGCCACTTaGATCCGAGTCCTGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QWELFGIKVSKVSFQQTIRMMAT*IRVLRK Trigger: CTTCCTCAGGACTCGGATCCAAGTGGCCATCATCCT...GATGGTTTGTTGAAAACTCACTTTAGATACCTTTATACCAAAAAGCTCCCACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| CDS-3UTR TCA 90 bp | TCTAAAGCAACATTTTCATATTGCCGTCAACCTAATTCACAAAGCTCCTGTGTGCGAGCACACCAAATATaGAGAACCAGAAGAGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: SKATFSYCRQPNSQSSCVRAHQI*RTRRGT Trigger: GGTTCCTCTTCTGGTTCTTCATATTTGGTGTGCTCG...CACACAGGAGCTTTGTGAATTAGGTTGACGGCAATATGAAAATGTTGCTTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| CDS-3UTR TCA 90 bp | GTTTGTATCACACAGTGTACTCCTTTGATGAGGAGGATATCAAAGGTAGTGTCAATGTTTACTCTCCTCTaGATCCCGAAGCCATACATC | + |
|
Preference number: 4 (lower is better) Translates to: VCITQCTPLMRRISKVVSMFTLL*IPKPYI Trigger: GATGTATGGCTTCGGGATTCAGAGGAGAGTAAACAT...TGACACTACCTTTGATATCCTCCTCATCAAAGGAGTACACTGTGTGATACAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| CDS-3UTR GCA 90 bp | GTTTGTATCACACAGTGTACTCCTTTGATGAGGAGGATATCAAAGGTAGTGTCATCAGGTATACATCTCTaGAGAAAAGGTCTGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VCITQCTPLMRRISKVVSSGIHL*RKGLLG Trigger: CCCAAGCAGACCTTTTCTGCAGAGATGTATACCTGA...TGACACTACCTTTGATATCCTCCTCATCAAAGGAGTACACTGTGTGATACAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| CDS-3UTR GCA 90 bp | GGAATTGTTTGTATCACACAGTGTACTCCTTTGATGAGGAGGATATCAAAGGTAAGCATAGTCCTGGTCTaGCCACTTCCATCTTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GIVCITQCTPLMRRISKVSIVLV*PLPSSN Trigger: GTTTGAAGATGGAAGTGGGCAGACCAGGACTATGCT...TACCTTTGATATCCTCCTCATCAAAGGAGTACACTGTGTGATACAAACAATTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| CDS-3UTR CCA 90 bp | TCTAAAGCAACATTTTCATATTGCCGTCAACCTAATTCACAAAGCTCCTGTGTGGGATGCTGTGCAGGCTaGGTGTTACAAAGTAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SKATFSYCRQPNSQSSCVGCCAG*VLQSKV Trigger: AACCTTACTTTGTAACACCCAGCCTGCACAGCATCC...CACACAGGAGCTTTGTGAATTAGGTTGACGGCAATATGAAAATGTTGCTTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| CDS-3UTR TCA 90 bp | CAGTGGGAGCTTTTTGGTATAAAGGTATCTAAAGTGAGTTTTCAACAAACCATCGGTACCATTGAGGGCTaGAAGGTCAGGTATACATCT | + |
|
Preference number: 4 (lower is better) Translates to: QWELFGIKVSKVSFQQTIGTIEG*KVRYTS Trigger: AGATGTATACCTGACCTTTCAGCCCTCAATGGTACC...GATGGTTTGTTGAAAACTCACTTTAGATACCTTTATACCAAAAAGCTCCCACTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| CDS-3UTR TCA 90 bp | CAGTGGGAGCTTTTTGGTATAAAGGTATCTAAAGTGAGTTTTCAACAAACCATCCGAGCACACCAAATATaGAGAACCAGAAGAGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: QWELFGIKVSKVSFQQTIRAHQI*RTRRGT Trigger: GGTTCCTCTTCTGGTTCTTCATATTTGGTGTGCTCG...GATGGTTTGTTGAAAACTCACTTTAGATACCTTTATACCAAAAAGCTCCCACTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| CDS-3UTR TCA 90 bp | GGGAATTGTTTGTATCACACAGTGTACTCCTTTGATGAGGAGGATATCAAAGGTCAGGTCTCCTTCAAGTaGAAGAACATGTTTACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GNCLYHTVYSFDEEDIKGQVSFK*KNMFTL Trigger: GAGAGTAAACATGTTCTTTCACTTGAAGGAGACCTG...ACCTTTGATATCCTCCTCATCAAAGGAGTACACTGTGTGATACAAACAATTCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| CDS-3UTR TCA 90 bp | GGGAATTGTTTGTATCACACAGTGTACTCCTTTGATGAGGAGGATATCAAAGGTCAATGGCAGACAAGATaGTCATCATTGAAAACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GNCLYHTVYSFDEEDIKGQWQTR*SSLKTR Trigger: CCTGGTTTTCAATGATGATCATCTTGTCTGCCATTG...ACCTTTGATATCCTCCTCATCAAAGGAGTACACTGTGTGATACAAACAATTCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| CDS-3UTR TCA 90 bp | GGAATTGTTTGTATCACACAGTGTACTCCTTTGATGAGGAGGATATCAAAGGTATGTTCTGAGCCTTTTTaGGTCTCCTGTCCAGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: GIVCITQCTPLMRRISKVCSEPF*VSCPGI Trigger: AATACCTGGACAGGAGACTCAAAAAGGCTCAGAACA...TACCTTTGATATCCTCCTCATCAAAGGAGTACACTGTGTGATACAAACAATTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| CDS-3UTR GCA 90 bp | TCACCGGCTTCAACAGTAACTATAACCATAGCAGCATATTTACAAATTCAGTACAGCATAGTCCTGGTCTaGCCACTTCCATCTTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SPASTVTITIAAYLQIQYSIVLV*PLPSSN Trigger: GTTTGAAGATGGAAGTGGGCAGACCAGGACTATGCT...GTACTGAATTTGTAAATATGCTGCTATGGTTATAGTTACTGTTGAAGCCGGTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| CDS-3UTR CCA 90 bp | ACCCTGCAGCTAGCTACAGGCTCACTATATGTCACCATTGCCATAGATTTTTATCTTAATTGGAGTAGGTaGTTACCTGAGTCACTCATT | + |
|
Preference number: 4 (lower is better) Translates to: TLQLATGSLYVTIAIDFYLNWSR*LPESLI Trigger: AATGAGTGACTCAGGTAACCACCTACTCCAATTAAG...ATAAAAATCTATGGCAATGGTGACATATAGTGAGCCTGTAGCTAGCTGCAGGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| CDS-3UTR TCA 90 bp | TTTAGAAAGTTGTTCACCGGCTTCAACAGTAACTATAACCATAGCAGCATATTTATACATCCAGAACGTTaGCTGTGGCCTCTGCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FRKLFTGFNSNYNHSSIFIHPER*LWPLLN Trigger: ATTCAGCAGAGGCCACAGTCAACGTTCTGGATGTAT...AAATATGCTGCTATGGTTATAGTTACTGTTGAAGCCGGTGAACAACTTTCTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| CDS-3UTR TCA 90 bp | TCTAAAGCAACATTTTCATATTGCCGTCAACCTAATTCACAAAGCTCCTGTGTGCAGGTCTCCTTCAAGTaGAAGAACATGTTTACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SKATFSYCRQPNSQSSCVQVSFK*KNMFTL Trigger: GAGAGTAAACATGTTCTTTCACTTGAAGGAGACCTG...CACACAGGAGCTTTGTGAATTAGGTTGACGGCAATATGAAAATGTTGCTTTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| CDS-3UTR TCA 90 bp | GAAGAAGCTAGTGACTCCTGTGGACCAATACTTCGAAAACCTTCTGGAATTACTAGATTGATAGCAAGATaGAGGTTAAAACTGGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: EEASDSCGPILRKPSGITRLIAR*RLKLGR Trigger: TCTACCCAGTTTTAACCTTCATCTTGCTATCAATCT...AGTAATTCCAGAAGGTTTTCGAAGTATTGGTCCACAGGAGTCACTAGCTTCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| CDS-3UTR TCA 90 bp | GTTTGTATCACACAGTGTACTCCTTTGATGAGGAGGATATCAAAGGTAGTGTCATCAGAATGTTTCTCATaGGCAGATAGAAAGCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: VCITQCTPLMRRISKVVSSECFS*ADRKHL Trigger: GAGATGCTTTCTATCTGCTCATGAGAAACATTCTGA...TGACACTACCTTTGATATCCTCCTCATCAAAGGAGTACACTGTGTGATACAAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| CDS-3UTR TCA 90 bp | GGGAATTGTTTGTATCACACAGTGTACTCCTTTGATGAGGAGGATATCAAAGGTCTTCCAAGAAGCAGATaGAAATGGTTTCAACACACA | + |
|
Preference number: 4 (lower is better) Translates to: GNCLYHTVYSFDEEDIKGLPRSR*KWFQHT Trigger: TGTGTGTTGAAACCATTTTCATCTGCTTCTTGGAAG...ACCTTTGATATCCTCCTCATCAAAGGAGTACACTGTGTGATACAAACAATTCCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| CDS-3UTR TCA 90 bp | GGGAATTGTTTGTATCACACAGTGTACTCCTTTGATGAGGAGGATATCAAAGGTAGATTGATAGCAAGATaGAGGTTAAAACTGGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GNCLYHTVYSFDEEDIKGRLIAR*RLKLGR Trigger: TCTACCCAGTTTTAACCTTCATCTTGCTATCAATCT...ACCTTTGATATCCTCCTCATCAAAGGAGTACACTGTGTGATACAAACAATTCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| CDS-3UTR TCA 90 bp | AAGTGCCAGCAGAAATACTGCTCTAAAGCAACATTTTCATATTGCCGTCAACCTCTTGGGTCACAAAGTTaGATATTTAACACAAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KCQQKYCSKATFSYCRQPLGSQS*IFNTKR Trigger: CCTCTTTGTGTTAAATATTCAACTTTGTGACCCAAG...AGGTTGACGGCAATATGAAAATGTTGCTTTAGAGCAGTATTTCTGCTGGCACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| CDS-3UTR CCA 90 bp | GTTTGTATCACACAGTGTACTCCTTTGATGAGGAGGATATCAAAGGTAGTGTCAATAAGGAAAAATCTCTaGGTCACAAGTTTCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VCITQCTPLMRRISKVVSIRKNL*VTSFIF Trigger: GAAGATGAAACTTGTGACCCAGAGATTTTTCCTTAT...TGACACTACCTTTGATATCCTCCTCATCAAAGGAGTACACTGTGTGATACAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| CDS-3UTR CCA 90 bp | TTTAGAAAGTTGTTCACCGGCTTCAACAGTAACTATAACCATAGCAGCATATTTTGGGTCATACCTCCTTaGGTCACAAAGTTGAATATT | + |
|
Preference number: 4 (lower is better) Translates to: FRKLFTGFNSNYNHSSIFWVIPP*VTKLNI Trigger: AATATTCAACTTTGTGACCCAAGGAGGTATGACCCA...AAATATGCTGCTATGGTTATAGTTACTGTTGAAGCCGGTGAACAACTTTCTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| CDS CCA 90 bp | AGACAGCATAAAACGTCCGTACAAGTCCTTTTGGCAGTAGGTCCCTaGAAATCTGGGTCATACCTCCTTGGGTCACCCTGGCTGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RQHKTSVQVLLAVGP*KSGSYLLGSPWLLG Trigger: CCCCAGCAGCCAGGGTGACCCAAGGAGGTATGACCCAGATTTCCAGGGACCTACTGCCAAAAGGACTTGTACGGACGTTTTATGCTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| CDS CCA 90 bp | ATCTCTGGGGACCCGGACGCTTCTTGGTCAGGATGCTGTGCAGGCTaGGTGTTACAAAGTAAGGTTTCTCTGCAGATCCATCGTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ISGDPDASWSGCCAG*VLQSKVSLQIHRSS Trigger: AGAGGAACGATGGATCTGCAGAGAAACCTTACTTTGTAACACCCAGCCTGCACAGCATCCTGACCAAGAAGCGTCCGGGTCCCCAGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| CDS-3UTR CAA 90 bp | GGGAAGGTGTGTTGGACGGATACAGTGTGGGAGGCGACACAGGCAGCAGGATATTACTGCTTCTTGATCTaGCCCTGCTCCAGCAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: GKVCWTDTVWEATQAAGYYCFLI*PCSSKM Trigger: CATTTTGCTGGAGCAGGGCAAGATCAAGAAGCAGTA...ATATCCTGCTGCCTGTGTCGCCTCCCACACTGTATCCGTCCAACACACCTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| CDS GCA 90 bp | CAAAGAGGTTGTAGACCTGGAAGGTCAGGATGTAATTGTGGTACATaGTCCTTCCGCCATAGAAAGCAAAGTTGCACGATGCACCGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QRGCRPGRSGCNCGT*SFRHRKQSCTMHRG Trigger: GCCCCGGTGCATCGTGCAACTTTGCTTTCTATGGCGGAAGGAGCATGTACCACAATTACATCCTGACCTTCCAGGTCTACAACCTCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089948.6 ENSMUST00000239250.2 |
||
| CDS-3UTR CAA 90 bp | ATTAAAACATTGTCGGCTACAGGTGTTTGCACTTGGGACCGCAGTCTGCAAAGTTCCACAGGCTTGGCCTaGGCCTTGCAGAATTGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: IKTLSATGVCTWDRSLQSSTGLA*ALQNWR Trigger: TCGCCAATTCTGCAAGGCCAAGGCCAAGCCTGTGGA...ACTTTGCAGACTGCGGTCCCAAGTGCAAACACCTGTAGCCGACAATGTTTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| CDS-3UTR CAA 90 bp | GAAGAAGCTAGTGACTCCTGTGGACCAATACTTCGAAAACCTTCTGGAATTACTGGACCCGGACGCTTCTaGGTCAGGATGCTGTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: EEASDSCGPILRKPSGITGPGRF*VRMLCR Trigger: CCTGCACAGCATCCTGACCAAGAAGCGTCCGGGTCC...AGTAATTCCAGAAGGTTTTCGAAGTATTGGTCCACAGGAGTCACTAGCTTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| CDS TCA 90 bp | TTCAAACTTCATCCTACTTCCTGGCGTCCAGGTACCATTGAGGGCTaGAAGGTCAGGTATACATCTCTGCAGAAAAGGTCTGCTTGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: FKLHPTSWRPGTIEG*KVRYTSLQKRSAWV Trigger: TACCCAAGCAGACCTTTTCTGCAGAGATGTATACCTGACCTTTCAGCCCTCAATGGTACCTGGACGCCAGGAAGTAGGATGAAGTTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089948.6 ENSMUST00000239250.2 |
||
| CDS TCA 90 bp | TTCCATCTTCAAACTTCATCCTACTTCCTGGCGTCCAGGTACCATTaGGGGCTGAAAGGTCAGGTATACATCTCTGCAGAAAAGGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FHLQTSSYFLASRYH*GLKGQVYISAEKVC Trigger: GCAGACCTTTTCTGCAGAGATGTATACCTGACCTTTCAGCCCTCAATGGTACCTGGACGCCAGGAAGTAGGATGAAGTTTGAAGATGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089948.6 ENSMUST00000239250.2 |
||
| CDS GCA 90 bp | TCTCCTGTCCAGGTATTCTACGATCACTTTAAACATCTGAACGGATaGAAGGATCAAAGATCCAAAGGCCAGAGACCCCGTGTGGTATCG | + |
|
Preference number: 5 (lower is better) Translates to: SPVQVFYDHFKHLNG*KDQRSKGQRPRVVS Trigger: CGATACCACACGGGGTCTCTGGCCTTTGGATCTTTGATCCTTGCATCCGTTCAGATGTTTAAAGTGATCGTAGAATACCTGGACAGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089948.6 ENSMUST00000239250.2 |
||
| CDS-3UTR CAA 90 bp | CAGTGGGAGCTTTTTGGTATAAAGGTATCTAAAGTGAGTTTTCAACAAACCATCCTGGGTCATACCTCCTaGGGTCACCCTGGCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QWELFGIKVSKVSFQQTILGHTS*GHPGCW Trigger: CCAGCAGCCAGGGTGACCCAAGGAGGTATGACCCAG...GATGGTTTGTTGAAAACTCACTTTAGATACCTTTATACCAAAAAGCTCCCACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| CDS TCA 90 bp | TTTTTGAGTCTCCTGTCCAGGTATTCTACGATCACTTTAAACATCTaGACGGATGCAAGGATCAAAGATCCAAAGGCCAGAGACCCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: FLSLLSRYSTITLNI*TDARIKDPKARDPV Trigger: CACGGGGTCTCTGGCCTTTGGATCTTTGATCCTTGCATCCGTTCAGATGTTTAAAGTGATCGTAGAATACCTGGACAGGAGACTCAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089948.6 ENSMUST00000239250.2 |
||
| CDS GCA 90 bp | ATTGTGGTACATGCTCCTTCCGCCATAGAAAGCAAAGTTGCACGATaGACCGGGGCAGTCTTTGGGAATGTTAGTATAAGGAAAAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: IVVHAPSAIESKVAR*TGAVFGNVSIRKNL Trigger: GAGATTTTTCCTTATACTAACATTCCCAAAGACTGCCCCGGTGCATCGTGCAACTTTGCTTTCTATGGCGGAAGGAGCATGTACCACAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089948.6 ENSMUST00000239250.2 |
||
| CDS-3UTR CAA 90 bp | CAGTGGGAGCTTTTTGGTATAAAGGTATCTAAAGTGAGTTTTCAACAAACCATCTCCACAGGCTTGGCCTaGGCCTTGCAGAATTGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: QWELFGIKVSKVSFQQTISTGLA*ALQNWR Trigger: TCGCCAATTCTGCAAGGCCAAGGCCAAGCCTGTGGA...GATGGTTTGTTGAAAACTCACTTTAGATACCTTTATACCAAAAAGCTCCCACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
||
| CDS-3UTR CAA 90 bp | GCCACTGCTCTGAACCTTCATCCGATTTCCTCCCTCACTAAAAGTCGAACTTCGGATAGAAAGCATCTCTaGTTGACTCACAGAAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ATALNLHPISSLTKSRTSDRKHL*LTHRSF Trigger: AAAACTTCTGTGAGTCAACAAGAGATGCTTTCTATC...CGAAGTTCGACTTTTAGTGAGGGAGGAAATCGGATGAAGGTTCAGAGCAGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| CDS-3UTR CAA 90 bp | CTGGTTCTATGTAGGAAGATGCCATACCACCATTCTAAATCTAGGTTCGCACACCTGGGTCATACCTCCTaGGGTCACAAAGTTGAATAT | + |
|
Preference number: 5 (lower is better) Translates to: LVLCRKMPYHHSKSRFAHLGHTS*GHKVEY Trigger: ATATTCAACTTTGTGACCCAAGGAGGTATGACCCAG...GTGTGCGAACCTAGATTTAGAATGGTGGTATGGCATCTTCCTACATAGAACCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
||
| CDS TCA 90 bp | AATTTAAAGTCGTTGGTCCATCTACAATTATTTGTAGTCTTTCTGTaGAGAGTAGGAAGGCCAAGACACCTACAATCCCAGAAACCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: NLKSLVHLQLFVVFL*RVGRPRHLQSQKPG Trigger: TCCTGGTTTCTGGGATTGTAGGTGTCTTGGCCTTCCTACTCTTCACAGAAAGACTACAAATAATTGTAGATGGACCAACGACTTTAAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089948.6 ENSMUST00000239250.2 |
||
| CDS-3UTR CAA 90 bp | GGGAATTGTTTGTATCACACAGTGTACTCCTTTGATGAGGAGGATATCAAAGGTGACTCACAGAAGTTTTaGCCATATAATGCAATCATG | + |
|
Preference number: 5 (lower is better) Translates to: GNCLYHTVYSFDEEDIKGDSQKF*PYNAIM Trigger: CATGATTGCATTATATGGCAAAAACTTCTGTGAGTC...ACCTTTGATATCCTCCTCATCAAAGGAGTACACTGTGTGATACAAACAATTCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
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| CDS-3UTR CAA 90 bp | AAGTGCCAGCAGAAATACTGCTCTAAAGCAACATTTTCATATTGCCGTCAACCTGACTCACAGAAGTTTTaGCCATATAATGCAATCATG | + |
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Preference number: 5 (lower is better) Translates to: KCQQKYCSKATFSYCRQPDSQKF*PYNAIM Trigger: CATGATTGCATTATATGGCAAAAACTTCTGTGAGTC...AGGTTGACGGCAATATGAAAATGTTGCTTTAGAGCAGTATTTCTGCTGGCACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| CDS-3UTR CAA 90 bp | GGAATTGTTTGTATCACACAGTGTACTCCTTTGATGAGGAGGATATCAAAGGTAGATAGAAAGCATCTCTaGTTGACTCACAGAAGTTTT | + |
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Preference number: 5 (lower is better) Translates to: GIVCITQCTPLMRRISKVDRKHL*LTHRSF Trigger: AAAACTTCTGTGAGTCAACAAGAGATGCTTTCTATC...TACCTTTGATATCCTCCTCATCAAAGGAGTACACTGTGTGATACAAACAATTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
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| CDS CCA 72 bp | CGTACAAGTCCTTTTGGCAGTAGGTCCCTGGAAATCTaGGTCATACCTCCTTGGGTCACCCTGGCTGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: RTSPFGSRSLEI*VIPPWVTLAAG Trigger: CCCAGCAGCCAGGGTGACCCAAGGAGGTATGACCCAGATTTCCAGGGACCTACTGCCAAAAGGACTTGTACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
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| CDS TCA 72 bp | TCTCCTCTGAATCCCGAAGCCATACATCCAGAACGTTaGCTGTGGCCTCTGCTGAATGCTGCTGTACTCCAG | + |
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Preference number: 6 (lower is better) Translates to: SPLNPEAIHPER*LWPLLNAAVLQ Trigger: CTGGAGTACAGCAGCATTCAGCAGAGGCCACAGTCAACGTTCTGGATGTATGGCTTCGGGATTCAGAGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089948.6 ENSMUST00000239250.2 |
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| CDS CCA 72 bp | AAAACGTCCGTACAAGTCCTTTTGGCAGTAGGTCCCTaGAAATCTGGGTCATACCTCCTTGGGTCACCCTGG | + |
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Preference number: 6 (lower is better) Translates to: KTSVQVLLAVGP*KSGSYLLGSPW Trigger: CCAGGGTGACCCAAGGAGGTATGACCCAGATTTCCAGGGACCTACTGCCAAAAGGACTTGTACGGACGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089948.6 |
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| CDS CCA 72 bp | GACCCGGACGCTTCTTGGTCAGGATGCTGTGCAGGCTaGGTGTTACAAAGTAAGGTTTCTCTGCAGATCCAT | + |
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Preference number: 6 (lower is better) Translates to: DPDASWSGCCAG*VLQSKVSLQIH Trigger: ATGGATCTGCAGAGAAACCTTACTTTGTAACACCCAGCCTGCACAGCATCCTGACCAAGAAGCGTCCGGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| CDS TCA 72 bp | CATCCTACTTCCTGGCGTCCAGGTACCATTGAGGGCTaGAAGGTCAGGTATACATCTCTGCAGAAAAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: HPTSWRPGTIEG*KVRYTSLQKRS Trigger: AGACCTTTTCTGCAGAGATGTATACCTGACCTTTCAGCCCTCAATGGTACCTGGACGCCAGGAAGTAGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089948.6 ENSMUST00000239250.2 |
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| CDS GCA 72 bp | CATGCTCCTTCCGCCATAGAAAGCAAAGTTGCACGATaGACCGGGGCAGTCTTTGGGAATGTTAGTATAAGG | + |
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Preference number: 6 (lower is better) Translates to: HAPSAIESKVAR*TGAVFGNVSIR Trigger: CCTTATACTAACATTCCCAAAGACTGCCCCGGTGCATCGTGCAACTTTGCTTTCTATGGCGGAAGGAGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089948.6 ENSMUST00000239250.2 |
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| CDS GCA 72 bp | GCTGTGCAGGCTGGGTGTTACAAAGTAAGGTTTCTCTaGAGATCCATCGTTCCTCTCCAGGTCTTCACAGAA | + |
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Preference number: 6 (lower is better) Translates to: AVQAGCYKVRFL*RSIVPLQVFTE Trigger: TTCTGTGAAGACCTGGAGAGGAACGATGGATCTGCAGAGAAACCTTACTTTGTAACACCCAGCCTGCACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| CDS GCA 72 bp | GTACCATTGAGGGCTGAAAGGTCAGGTATACATCTCTaGAGAAAAGGTCTGCTTGGGTACACAGCTAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: VPLRAERSGIHL*RKGLLGYTAKG Trigger: TCCCTTAGCTGTGTACCCAAGCAGACCTTTTCTGCAGAGATGTATACCTGACCTTTCAGCCCTCAATGGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089948.6 ENSMUST00000239250.2 |
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| CDS GCA 72 bp | TTCGCAGCCTCCCTGAATTCTAGCATAGTCCTGGTCTaGCCACTTCCATCTTCAAACTTCATCCTACTTCCT | + |
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Preference number: 6 (lower is better) Translates to: FAASLNSSIVLV*PLPSSNFILLP Trigger: AGGAAGTAGGATGAAGTTTGAAGATGGAAGTGGGCAGACCAGGACTATGCTAGAATTCAGGGAGGCTGCGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089948.6 ENSMUST00000239250.2 |
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| CDS CCA 72 bp | AAAACGTCCGTACAAGTCCTTTTGGCAGTAGGTCCCTaGAAATCTGGGTCATACCTCCTTGGGTCACAAAGT | + |
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Preference number: 6 (lower is better) Translates to: KTSVQVLLAVGP*KSGSYLLGSQS Trigger: ACTTTGTGACCCAAGGAGGTATGACCCAGATTTCCAGGGACCTACTGCCAAAAGGACTTGTACGGACGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239250.2 |
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| CDS CAA 90 bp | CTTCCATCTTCAAACTTCATCCTACTTCCTGGCGTCCAGGTACCATaGAGGGCTGAAAGGTCAGGTATACATCTCTGCAGAAAAGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: LPSSNFILLPGVQVP*RAERSGIHLCRKGL Trigger: CAGACCTTTTCTGCAGAGATGTATACCTGACCTTTCAGCCCTCAATGGTACCTGGACGCCAGGAAGTAGGATGAAGTTTGAAGATGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089948.6 ENSMUST00000239250.2 |
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| CDS GCA 72 bp | ACATCCAGAACGTTGACTGTGGCCTCTGCTGAATGCTaGTGTACTCCAGAAAACAGTACCATATTCCGTATC | + |
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Preference number: 6 (lower is better) Translates to: TSRTLTVASAEC*CTPENSTIFRI Trigger: GATACGGAATATGGTACTGTTTTCTGGAGTACAGCAGCATTCAGCAGAGGCCACAGTCAACGTTCTGGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089948.6 ENSMUST00000239250.2 |
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| CDS GCA 72 bp | TGTAGACCTGGAAGGTCAGGATGTAATTGTGGTACATaGTCCTTCCGCCATAGAAAGCAAAGTTGCACGATG | + |
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Preference number: 6 (lower is better) Translates to: CRPGRSGCNCGT*SFRHRKQSCTM Trigger: CATCGTGCAACTTTGCTTTCTATGGCGGAAGGAGCATGTACCACAATTACATCCTGACCTTCCAGGTCTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089948.6 ENSMUST00000239250.2 |
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| CDS CCA 72 bp | CAAAAATTGCATATCCAAGTAGGTGAGGAATCTCTCTaGGCACCTGGAGACACAGATCTGTGTGGTAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: QKLHIQVGEESL*APGDTDLCGRA Trigger: TGCTCTACCACACAGATCTGTGTCTCCAGGTGCCCAGAGAGATTCCTCACCTACTTGGATATGCAATTTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089948.6 ENSMUST00000239250.2 |
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| CDS CAA 72 bp | AAGATCAGACAGCATAAAACGTCCGTACAAGTCCTTTaGGCAGTAGGTCCCTGGAAATCTGGGTCATACCTC | + |
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Preference number: 6 (lower is better) Translates to: KIRQHKTSVQVL*AVGPWKSGSYL Trigger: GAGGTATGACCCAGATTTCCAGGGACCTACTGCCAAAAGGACTTGTACGGACGTTTTATGCTGTCTGATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089948.6 ENSMUST00000239250.2 |
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| CDS CAA 72 bp | GAGAGTCTCCACAGGCTTGGCCTTGGCCTTGCAGAATaGGCGATAGTATTCCCAGTAGTTTTTGTCTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: ESLHRLGLGLAE*AIVFPVVFVFF Trigger: AAAGAAGACAAAAACTACTGGGAATACTATCGCCAATTCTGCAAGGCCAAGGCCAAGCCTGTGGAGACTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089948.6 ENSMUST00000239250.2 |
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| CDS TCA 72 bp | AAGCCATACATCCAGAACGTTGACTGTGGCCTCTGCTaGATGCTGCTGTACTCCAGAAAACAGTACCATATT | + |
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Preference number: 6 (lower is better) Translates to: KPYIQNVDCGLC*MLLYSRKQYHI Trigger: AATATGGTACTGTTTTCTGGAGTACAGCAGCATTCAGCAGAGGCCACAGTCAACGTTCTGGATGTATGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089948.6 ENSMUST00000239250.2 |
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| CDS GCA 72 bp | CAGGTATTCTACGATCACTTTAAACATCTGAACGGATaGAAGGATCAAAGATCCAAAGGCCAGAGACCCCGT | + |
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Preference number: 6 (lower is better) Translates to: QVFYDHFKHLNG*KDQRSKGQRPR Trigger: ACGGGGTCTCTGGCCTTTGGATCTTTGATCCTTGCATCCGTTCAGATGTTTAAAGTGATCGTAGAATACCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089948.6 ENSMUST00000239250.2 |
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| CDS TCA 72 bp | CTCCTGTCCAGGTATTCTACGATCACTTTAAACATCTaGACGGATGCAAGGATCAAAGATCCAAAGGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: LLSRYSTITLNI*TDARIKDPKAR Trigger: TCTGGCCTTTGGATCTTTGATCCTTGCATCCGTTCAGATGTTTAAAGTGATCGTAGAATACCTGGACAGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089948.6 ENSMUST00000239250.2 |
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| CDS CAA 90 bp | AAGATCTCTGAGAGTCTCCACAGGCTTGGCCTTGGCCTTGCAGAATaGGCGATAGTATTCCCAGTAGTTTTTGTCTTCTTTGTTCAAAAA | + |
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Preference number: 6 (lower is better) Translates to: KISESLHRLGLGLAE*AIVFPVVFVFFVQK Trigger: TTTTTGAACAAAGAAGACAAAAACTACTGGGAATACTATCGCCAATTCTGCAAGGCCAAGGCCAAGCCTGTGGAGACTCTCAGAGATCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089948.6 ENSMUST00000239250.2 |
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| CDS TCA 72 bp | TGTCTTCTTTGTTCAAAAATTGCATATCCAAGTAGGTaGGGAATCTCTCTGGGCACCTGGAGACACAGATCT | + |
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Preference number: 6 (lower is better) Translates to: CLLCSKIAYPSR*GISLGTWRHRS Trigger: AGATCTGTGTCTCCAGGTGCCCAGAGAGATTCCTCACCTACTTGGATATGCAATTTTTGAACAAAGAAGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089948.6 ENSMUST00000239250.2 |
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| CDS TCA 72 bp | TCGTTGGTCCATCTACAATTATTTGTAGTCTTTCTGTaGAGAGTAGGAAGGCCAAGACACCTACAATCCCAG | + |
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Preference number: 6 (lower is better) Translates to: SLVHLQLFVVFL*RVGRPRHLQSQ Trigger: CTGGGATTGTAGGTGTCTTGGCCTTCCTACTCTTCACAGAAAGACTACAAATAATTGTAGATGGACCAACGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089948.6 ENSMUST00000239250.2 |
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| CDS GCA 72 bp | ATCTCTGGGTCACAAGTTTCATCTTCATATATACATTaGCCCGCTGGGACCATAACTTTGAATATTGGTACC | + |
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Preference number: 6 (lower is better) Translates to: ISGSQVSSSYIH*PAGTITLNIGT Trigger: GGTACCAATATTCAAAGTTATGGTCCCAGCGGGGCAATGTATATATGAAGATGAAACTTGTGACCCAGAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089948.6 ENSMUST00000239250.2 |
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| CDS CAA 72 bp | AATCTCTGGGTCACAAGTTTCATCTTCATATATACATaGCCCCGCTGGGACCATAACTTTGAATATTGGTAC | + |
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Preference number: 6 (lower is better) Translates to: NLWVTSFIFIYT*PRWDHNFEYWY Trigger: GTACCAATATTCAAAGTTATGGTCCCAGCGGGGCAATGTATATATGAAGATGAAACTTGTGACCCAGAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089948.6 ENSMUST00000239250.2 |
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| CDS CCA 72 bp | GCAGTCTTTGGGAATGTTAGTATAAGGAAAAATCTCTaGGTCACAAGTTTCATCTTCATATATACATTGCCC | + |
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Preference number: 6 (lower is better) Translates to: AVFGNVSIRKNL*VTSFIFIYTLP Trigger: GGGCAATGTATATATGAAGATGAAACTTGTGACCCAGAGATTTTTCCTTATACTAACATTCCCAAAGACTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089948.6 ENSMUST00000239250.2 |
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