Pregenerated sensors for SLC44A4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000007034Ensembl transcript IDs: ENSMUST00000007249.15, ENSMUST00000169230.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | GATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGCAGCAGCACCAGGGGTaGCGCCACCAGGCGCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: DSQGIDGRASVQEGCISRQQHQG*RHQAQE Trigger: CTCCTGCGCCTGGTGGCGGCACCCCTGGTGCTGCTG...CCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR GCA 90 bp | AAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGTCACGATCAGCAGCACCAGGGGTaGCGCCACCAGGCGCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: KALTAGLLYRRAAFPGHDQQHQG*RHQAQE Trigger: CTCCTGCGCCTGGTGGCGGCACCCCTGGTGCTGCTG...ATCGTGACCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR CCA 90 bp | CAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGTCACGACCGGCAAGGACACACTaGCCCAGGGCCAGTACCCAG | + |
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Preference number: 4 (lower is better) Translates to: QGIDGRASVQEGCISRSRPARTH*PRASTQ Trigger: CTGGGTACTGGCCCTGGGCCAGTGTGTCCTTGCCGG...TCGTGACCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR CCA 90 bp | ATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGTCCGGCAAGGACACACTaGCCCAGGGCCAGTACCCAG | + |
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Preference number: 4 (lower is better) Translates to: ILKALTAGLLYRRAAFPGPARTH*PRASTQ Trigger: CTGGGTACTGGCCCTGGGCCAGTGTGTCCTTGCCGG...ACCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR TCA 90 bp | CAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGTCACGAGGCGCAGGAGGAGGATaGACAGCAGACTTAGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: QGIDGRASVQEGCISRSRGAGGG*TADLVP Trigger: TGGCACTAAGTCTGCTGTTCATCCTCCTCCTGCGCC...TCGTGACCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR TCA 90 bp | GATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGGCACAAGGGACAGGATaGGGGCTCCAAACGCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: DSQGIDGRASVQEGCISRAQGTG*GLQTPV Trigger: CACTGGCGTTTGGAGCCCTCATCCTGTCCCTTGTGC...CCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR CCA 90 bp | GATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGCGCAGTAGGCCCCCGTaGAGTTTCTGGGGTAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: DSQGIDGRASVQEGCISRRSRPP*SFWGRA Trigger: TGCTCTACCCCAGAAACTCCACGGGGGCCTACTGCG...CCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007249.15 |
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| CDS-3UTR CCA 90 bp | CGTGATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCGAAGAGACGCACACCTaGGGTGTGGGGCACTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: RDSQGIDGRASVQEGCISEETHT*GVGHCR Trigger: CCTACAGTGCCCCACACCCCAGGTGTGCGTCTCTTC...GGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAATCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007249.15 |
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| CDS-3UTR TCA 90 bp | AAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGTCACGATGGCGCAGGAGGAGGATaGACAGCAGACTTAGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: KALTAGLLYRRAAFPGHDGAGGG*TADLVP Trigger: TGGCACTAAGTCTGCTGTTCATCCTCCTCCTGCGCC...ATCGTGACCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR TCA 90 bp | ATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGTGGCTCCAAACGCCAGTaGGCCAGTGTGGTAACGGAG | + |
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Preference number: 4 (lower is better) Translates to: ILKALTAGLLYRRAAFPGGSKRQ*ASVVTE Trigger: CTCCGTTACCACACTGGCTCACTGGCGTTTGGAGCC...ACCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR GCA 90 bp | ATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGTTCTGCCCCACAGCCCTaGTGGCTTCCTTCAGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: ILKALTAGLLYRRAAFPGSAPQP*WLPSAE Trigger: CTCTGCTGAAGGAAGCCAGCAGGGCTGTGGGGCAGA...ACCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR CCA 90 bp | AAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGTCACGATGTAGTGAAGCCCAGTTaGGTGATGGAGGCGCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: KALTAGLLYRRAAFPGHDVVKPS*VMEAPL Trigger: CAAGGGCGCCTCCATCACCCAACTGGGCTTCACTAC...ATCGTGACCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR CCA 90 bp | AAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGTCACGATGGGGTTGCCCGGATGTaGCCAGGTATAGAGCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: KALTAGLLYRRAAFPGHDGVARM*PGIELS Trigger: TGACAGCTCTATACCTGGCCACATCCGGGCAACCCC...ATCGTGACCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR TCA 90 bp | CGTGATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGAGGACACAGCAGATaGTGTCTGTGCAGCCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: RDSQGIDGRASVQEGCISRGHSR*CLCSPC Trigger: ACAGGGGCTGCACAGACATCATCTGCTGTGTCCTCT...GGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAATCACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007249.15 |
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| CDS-3UTR TCA 90 bp | TTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGTCACGATGAGTCTTGTGCGGATGAAGGCTaGGCTCAAAGGGAAGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: LTAGLLYRRAAFPGHDESCADEG*AQREGR Trigger: CCTACCTTCCCTTTGAGCTCAGCCTTCATCCGCACA...AGACTCATCGTGACCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR TCA 90 bp | CGTGATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCTGTGCGGATGAAGGCTaGGCTCAAAGGGAAGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: RDSQGIDGRASVQEGCISCADEG*AQREGR Trigger: CCTACCTTCCCTTTGAGCTCAGCCTTCATCCGCACA...GGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAATCACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR TCA 90 bp | TTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGTCACGATGAGTCTAACGGAGTGTGCGGATaGAGGCTGAGCTCAAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: LTAGLLYRRAAFPGHDESNGVCG*RLSSKG Trigger: TCCCTTTGAGCTCAGCCTTCATCCGCACACTCCGTT...AGACTCATCGTGACCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR GCA 90 bp | CGTGATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCGGACAGAGTCCCTTCTaGAGGCTCTCCTCCACTATC | + |
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Preference number: 4 (lower is better) Translates to: RDSQGIDGRASVQEGCISGQSPF*RLSSTI Trigger: GATAGTGGAGGAGAGCCTGCAGAAGGGACTCTGTCC...GGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAATCACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR GCA 90 bp | GATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGGGACAGAGTCCCTTCTaGAGGCTCTCCTCCACTATC | + |
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Preference number: 4 (lower is better) Translates to: DSQGIDGRASVQEGCISRGQSPF*RLSSTI Trigger: GATAGTGGAGGAGAGCCTGCAGAAGGGACTCTGTCC...CCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR CCA 90 bp | AATCGTGATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTCGCACACCTGGGGTGTaGGGCACTGTAGGCCATTCT | + |
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Preference number: 4 (lower is better) Translates to: NRDSQGIDGRASVQEGCIRTPGV*GTVGHS Trigger: AGAATGGCCTACAGTGCCCCACACCCCAGGTGTGCG...AATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAATCACGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007249.15 |
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| CDS-3UTR CCA 90 bp | ATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGTGTAGTGAAGCCCAGTTaGGTGATGGAGGCGCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: ILKALTAGLLYRRAAFPGVVKPS*VMEAPL Trigger: CAAGGGCGCCTCCATCACCCAACTGGGCTTCACTAC...ACCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR TCA 90 bp | CAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGTCACGAAGGGTAGAACATAGTTaGCATCATCTGCCCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: QGIDGRASVQEGCISRSRRVEHS*HHLPHS Trigger: GCTGTGGGGCAGATGATGTCAACTATGTTCTACCCT...TCGTGACCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR GCA 90 bp | TTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGTCACGATGAGTCTATAGTTGACATCATCTaGCCCACAGCCCTGCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: LTAGLLYRRAAFPGHDESIVDII*PTALLA Trigger: AGCCAGCAGGGCTGTGGGGCAGATGATGTCAACTAT...AGACTCATCGTGACCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR GCA 90 bp | CGTGATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCCTTTCCCCCTGTAGGTaGCTCATTCTTCTTGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: RDSQGIDGRASVQEGCISLSPCR*LILLAQ Trigger: CTGGGCAAGAAGAATGAGGCACCTACAGGGGGAAAG...GGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAATCACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR GCA 90 bp | TTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGTCACGATGAGTCTCTTTCCCCCTGTAGGTaGCTCATTCTTCTTGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LTAGLLYRRAAFPGHDESLSPCR*LILLAQ Trigger: CTGGGCAAGAAGAATGAGGCACCTACAGGGGGAAAG...AGACTCATCGTGACCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR CCA 90 bp | AAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGTCACGATGTTGATGTTGGGGAGTaGGAAACAACGTCCCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: KALTAGLLYRRAAFPGHDVDVGE*ETTSQS Trigger: GCTCTGGGACGTTGTTTCCCACTCCCCAACATCAAC...ATCGTGACCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR CCA 90 bp | CGTGATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCGTTGATGTTGGGGAGTaGGAAACAACGTCCCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: RDSQGIDGRASVQEGCISVDVGE*ETTSQS Trigger: GCTCTGGGACGTTGTTTCCCACTCCCCAACATCAAC...GGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAATCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR CCA 90 bp | TTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGTCACGATGAGTCTGCGATCCGGATCCTCTaGCGCAGGAAAATGAGCATA | + |
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Preference number: 4 (lower is better) Translates to: LTAGLLYRRAAFPGHDESAIRIL*RRKMSI Trigger: TATGCTCATTTTCCTGCGCCAGAGGATCCGGATCGC...AGACTCATCGTGACCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR CCA 90 bp | AATCGTGATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTGGGGTTGCCCGGATGTaGCCAGGTATAGAGCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: NRDSQGIDGRASVQEGCIGVARM*PGIELS Trigger: TGACAGCTCTATACCTGGCCACATCCGGGCAACCCC...AATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAATCACGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR TCA 90 bp | TTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGTCACGATGAGTCTTTCACCGACTGTCTTTaGGAACTGGAACACCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: LTAGLLYRRAAFPGHDESFTDCL*ELEHLH Trigger: GTGGAGGTGTTCCAGTTCTCAAAGACAGTCGGTGAA...AGACTCATCGTGACCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007249.15 |
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| CDS-3UTR TCA 90 bp | AATCGTGATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTAACGGAGTGTGCGGATaGAGGCTGAGCTCAAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: NRDSQGIDGRASVQEGCINGVCG*RLSSKG Trigger: TCCCTTTGAGCTCAGCCTTCATCCGCACACTCCGTT...AATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAATCACGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR TCA 90 bp | TTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGTCACGATGAGTCTACAGCAGCAGATCAGTaGCTTTATCCAGGACGACGA | + |
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Preference number: 4 (lower is better) Translates to: LTAGLLYRRAAFPGHDESTAADQ*LYPGRR Trigger: TCGTCGTCCTGGATAAAGTCACTGATCTGCTGCTGT...AGACTCATCGTGACCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR GCA 90 bp | CAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGTCACGAGTGCCTCATTCTTCTTaGCCAGAATCTTCAGGAGTG | + |
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Preference number: 4 (lower is better) Translates to: QGIDGRASVQEGCISRSRVPHSS*PESSGV Trigger: CACTCCTGAAGATTCTGGGCAAGAAGAATGAGGCAC...TCGTGACCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR CCA 90 bp | ATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGTGCGATCCGGATCCTCTaGCGCAGGAAAATGAGCATA | + |
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Preference number: 4 (lower is better) Translates to: ILKALTAGLLYRRAAFPGAIRIL*RRKMSI Trigger: TATGCTCATTTTCCTGCGCCAGAGGATCCGGATCGC...ACCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR TCA 90 bp | CAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGTCACGAGCAGCCAATAATAGTTaGGGTTGGGGTTCTCAAAGT | + |
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Preference number: 4 (lower is better) Translates to: QGIDGRASVQEGCISRSRAANNS*GWGSQS Trigger: ACTTTGAGAACCCCAACCTCAACTATTATTGGCTGC...TCGTGACCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR GCA 90 bp | AATCGTGATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTATAGTTGACATCATCTaGCCCACAGCCCTGCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: NRDSQGIDGRASVQEGCIIVDII*PTALLA Trigger: AGCCAGCAGGGCTGTGGGGCAGATGATGTCAACTAT...AATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAATCACGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR GCA 90 bp | TTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGTCACGATGAGTCTCAGAATCTTCAGGAGTaGCTTGGGCATGTAGTAAGG | + |
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Preference number: 4 (lower is better) Translates to: LTAGLLYRRAAFPGHDESQNLQE*LGHVVR Trigger: CCTTACTACATGCCCAAGGCACTCCTGAAGATTCTG...AGACTCATCGTGACCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR GCA 90 bp | CGTGATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCCAGAATCTTCAGGAGTaGCTTGGGCATGTAGTAAGG | + |
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Preference number: 4 (lower is better) Translates to: RDSQGIDGRASVQEGCISQNLQE*LGHVVR Trigger: CCTTACTACATGCCCAAGGCACTCCTGAAGATTCTG...GGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAATCACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR GCA 90 bp | CGTGATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCGTGCCTCATTCTTCTTaGCCAGAATCTTCAGGAGTG | + |
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Preference number: 4 (lower is better) Translates to: RDSQGIDGRASVQEGCISVPHSS*PESSGV Trigger: CACTCCTGAAGATTCTGGGCAAGAAGAATGAGGCAC...GGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAATCACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR CCA 90 bp | GATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGATCTGGGGACACCGCTaGAAGACAAAAGTTTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: DSQGIDGRASVQEGCISRIWGHR*KTKVSP Trigger: AGGAGAAACTTTTGTCTTCCAGCGGTGTCCCCAGAT...CCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007249.15 |
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| CDS-3UTR CCA 90 bp | CGTGATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCACAACGTCCCAGAGCTaGAGTAGAAGGAAGAAGGAA | + |
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Preference number: 4 (lower is better) Translates to: RDSQGIDGRASVQEGCISTTSQS*SRRKKE Trigger: TTCCTTCTTCCTTCTACTCCAGCTCTGGGACGTTGT...GGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAATCACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR TCA 90 bp | AATCGTGATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTACAGCAGCAGATCAGTaGCTTTATCCAGGACGACGA | + |
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Preference number: 4 (lower is better) Translates to: NRDSQGIDGRASVQEGCITAADQ*LYPGRR Trigger: TCGTCGTCCTGGATAAAGTCACTGATCTGCTGCTGT...AATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAATCACGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR TCA 90 bp | GATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGGCAGCCAATAATAGTTaGGGTTGGGGTTCTCAAAGT | + |
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Preference number: 4 (lower is better) Translates to: DSQGIDGRASVQEGCISRAANNS*GWGSQS Trigger: ACTTTGAGAACCCCAACCTCAACTATTATTGGCTGC...CCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR CCA 90 bp | GATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGATCCAGTACCAGGACTaGGCAAAATCTTCAAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: DSQGIDGRASVQEGCISRIQYQD*AKSSKI Trigger: GATCTTTGAAGATTTTGCCCAGTCCTGGTACTGGAT...CCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR CCA 90 bp | ATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGTATCCAGTACCAGGACTaGGCAAAATCTTCAAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: ILKALTAGLLYRRAAFPGIQYQD*AKSSKI Trigger: GATCTTTGAAGATTTTGCCCAGTCCTGGTACTGGAT...ACCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| 3UTR CAA 72 bp | AAATCTGTTTTCTACAAAATCGTGATTCTCAAGGCATaGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: KSVFYKIVILKA*TAGLLYRRAAF Trigger: AAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAATCACGATTTTGTAGAAAACAGATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS CCA 90 bp | ACCTCCACAGCCCATGGGGCCAGTGGGCAGGAAGAGACGCACACCTaGGGTGTGGGGCACTGTAGGCCATTCTCAGCGATGGAGATGATG | + |
|
Preference number: 5 (lower is better) Translates to: TSTAHGASGQEETHT*GVGHCRPFSAMEMM Trigger: CATCATCTCCATCGCTGAGAATGGCCTACAGTGCCCCACACCCCAGGTGTGCGTCTCTTCCTGCCCACTGGCCCCATGGGCTGTGGAGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007249.15 |
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| CDS CCA 90 bp | TATCCTTGTTGTCGCCCACGCCGCAGTAGGCCCCCGTGGAGTTTCTaGGGTAGAGCACTTGCCGAGGGTCTCCATACACCCAGGCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: YPCCRPRRSRPPWSF*GRALAEGLHTPRPQ Trigger: TTGTGGCCTGGGTGTATGGAGACCCTCGGCAAGTGCTCTACCCCAGAAACTCCACGGGGGCCTACTGCGGCGTGGGCGACAACAAGGATA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007249.15 |
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| CDS CCA 90 bp | CGTAGGGTTTATCCTTGTTGTCGCCCACGCCGCAGTAGGCCCCCGTaGAGTTTCTGGGGTAGAGCACTTGCCGAGGGTCTCCATACACCC | + |
|
Preference number: 5 (lower is better) Translates to: RRVYPCCRPRRSRPP*SFWGRALAEGLHTP Trigger: GGGTGTATGGAGACCCTCGGCAAGTGCTCTACCCCAGAAACTCCACGGGGGCCTACTGCGGCGTGGGCGACAACAAGGATAAACCCTACG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007249.15 |
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| CDS CCA 90 bp | GCCCTGCTGGCTTCCTTCAGCAGAGCGATGGCGATCCGGATCCTCTaGCGCAGGAAAATGAGCATAAGCAACAAGATGCCCTCCAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: ALLASFSRAMAIRIL*RRKMSISNKMPSRT Trigger: TGTCCTGGAGGGCATCTTGTTGCTTATGCTCATTTTCCTGCGCCAGAGGATCCGGATCGCCATCGCTCTGCTGAAGGAAGCCAGCAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR CAA 90 bp | CAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGTCACGATCTGGGGTAGAGCACTaGCCGAGGGTCTCCATACAC | + |
|
Preference number: 5 (lower is better) Translates to: QGIDGRASVQEGCISRSRSGVEH*PRVSIH Trigger: GTGTATGGAGACCCTCGGCAAGTGCTCTACCCCAGA...TCGTGACCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007249.15 |
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| CDS-3UTR CAA 90 bp | CGTGATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCGGTAGTGAAGCCCAGTaGGGTGATGGAGGCGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: RDSQGIDGRASVQEGCISGSEAQ*GDGGAL Trigger: AAGGGCGCCTCCATCACCCAACTGGGCTTCACTACC...GGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAATCACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS CCA 90 bp | AAGTCATGTTCACAGGAACGTTCTCACAGCCCGGTGTACTGGTGTTaGACGCCCAGTAGATGTACTGGGGTTGCCCGGATGTGGCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: KSCSQERSHSPVYWC*TPSRCTGVARMWPG Trigger: ACCTGGCCACATCCGGGCAACCCCAGTACATCTACTGGGCGTCCAACACCAGTACACCGGGCTGTGAGAACGTTCCTGTGAACATGACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS CCA 90 bp | GGTCACAAGTCATGTTCACAGGAACGTTCTCACAGCCCGGTGTACTaGTGTTGGACGCCCAGTAGATGTACTGGGGTTGCCCGGATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GHKSCSQERSHSPVY*CWTPSRCTGVARMW Trigger: CCACATCCGGGCAACCCCAGTACATCTACTGGGCGTCCAACACCAGTACACCGGGCTGTGAGAACGTTCCTGTGAACATGACTTGTGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR CAA 90 bp | TTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGTCACGATGAGTCTGTGATGGAGGCGCCCTaGTCCCGAAACACTTGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: LTAGLLYRRAAFPGHDESVMEAP*SRNTWY Trigger: GTACCAAGTGTTTCGGGACAAGGGCGCCTCCATCAC...AGACTCATCGTGACCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS TCA 90 bp | GCAAATGACCAGGAGGACGAAGGTGACCAGAGGGTAGAACATAGTTaGCATCATCTGCCCCACAGCCCTGCTGGCTTCCTTCAGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ANDQEDEGDQRVEHS*HHLPHSPAGFLQQS Trigger: GCTCTGCTGAAGGAAGCCAGCAGGGCTGTGGGGCAGATGATGTCAACTATGTTCTACCCTCTGGTCACCTTCGTCCTCCTGGTCATTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS GCA 90 bp | CCTCTTAGCTTGTGGTCGATATACTCCAGGATAACCCGGGCTATCTaGACAAGGGACAGGATGAGGGCTCCAAACGCCAGTGAGCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PLSLWSIYSRITRAI*TRDRMRAPNASEPV Trigger: CACTGGCTCACTGGCGTTTGGAGCCCTCATCCTGTCCCTTGTGCAGATAGCCCGGGTTATCCTGGAGTATATCGACCACAAGCTAAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR CAA 90 bp | AATCGTGATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTGGTAGTGAAGCCCAGTaGGGTGATGGAGGCGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: NRDSQGIDGRASVQEGCIGSEAQ*GDGGAL Trigger: AAGGGCGCCTCCATCACCCAACTGGGCTTCACTACC...AATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAATCACGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR CAA 90 bp | AATCGTGATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTGTGATGGAGGCGCCCTaGTCCCGAAACACTTGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: NRDSQGIDGRASVQEGCIVMEAP*SRNTWY Trigger: GTACCAAGTGTTTCGGGACAAGGGCGCCTCCATCAC...AATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAATCACGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR CAA 90 bp | GATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGCACCAGAGGCAACACTaGAAGCAGCAGATGATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: DSQGIDGRASVQEGCISRHQRQH*KQQMMQ Trigger: CTGCATCATCTGCTGCTTCAAGTGTTGCCTCTGGTG...CCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR CAA 90 bp | TTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGTCACGATGAGTCTCACCAGAGGCAACACTaGAAGCAGCAGATGATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LTAGLLYRRAAFPGHDESHQRQH*KQQMMQ Trigger: CTGCATCATCTGCTGCTTCAAGTGTTGCCTCTGGTG...AGACTCATCGTGACCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR CAA 90 bp | CAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGTCACGAGGTGCCTCATTCTTCTaGCCCAGAATCTTCAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: QGIDGRASVQEGCISRSRGASFF*PRIFRS Trigger: ACTCCTGAAGATTCTGGGCAAGAAGAATGAGGCACC...TCGTGACCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS GCA 90 bp | TCCCCCTGTAGGTGCCTCATTCTTCTTGCCCAGAATCTTCAGGAGTaGCTTGGGCATGTAGTAAGGCCGCTCCTGGGAACCATCATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SPCRCLILLAQNLQE*LGHVVRPLLGTIIS Trigger: AGAAATGATGGTTCCCAGGAGCGGCCTTACTACATGCCCAAGGCACTCCTGAAGATTCTGGGCAAGAAGAATGAGGCACCTACAGGGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR CAA 90 bp | GATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGAAACACTTGGTACTGTaGCCAGCAGTGGTAGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: DSQGIDGRASVQEGCISRKHLVL*PAVVDA Trigger: GGCATCTACCACTGCTGGCAACAGTACCAAGTGTTT...CCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR CAA 90 bp | TTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGTCACGATGAGTCTCAGGACTCCGTAGATTaGCAGGTTGAAGAGAGAACG | + |
|
Preference number: 5 (lower is better) Translates to: LTAGLLYRRAAFPGHDESQDSVD*QVEERT Trigger: CGTTCTCTCTTCAACCTGCAAATCTACGGAGTCCTG...AGACTCATCGTGACCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR CAA 90 bp | GATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGCAGGACTCCGTAGATTaGCAGGTTGAAGAGAGAACG | + |
|
Preference number: 5 (lower is better) Translates to: DSQGIDGRASVQEGCISRQDSVD*QVEERT Trigger: CGTTCTCTCTTCAACCTGCAAATCTACGGAGTCCTG...CCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR CAA 90 bp | CGTGATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCGGTGCCTCATTCTTCTaGCCCAGAATCTTCAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RDSQGIDGRASVQEGCISGASFF*PRIFRS Trigger: ACTCCTGAAGATTCTGGGCAAGAAGAATGAGGCACC...GGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAATCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR CAA 90 bp | GATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGAACGTGAAGTTGATGTaGGGGAGTGGGAAACAACGT | + |
|
Preference number: 5 (lower is better) Translates to: DSQGIDGRASVQEGCISRNVKLM*GSGKQR Trigger: ACGTTGTTTCCCACTCCCCAACATCAACTTCACGTT...CCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS-3UTR CAA 90 bp | ATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTTCCAGGTAAACACTTGGTACTGTaGCCAGCAGTGGTAGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: ILKALTAGLLYRRAAFPGKHLVL*PAVVDA Trigger: GGCATCTACCACTGCTGGCAACAGTACCAAGTGTTT...ACCTGGAAATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS CCA 90 bp | ACGGGGACAGAGTCCCTTCTGCAGGCTCTCCTCCACTATCATATCTaGGGACACCGCTGGAAGACAAAAGTTTCTCCTTTCACCATAAAC | + |
|
Preference number: 5 (lower is better) Translates to: TGTESLLQALLHYHI*GHRWKTKVSPFTIN Trigger: GTTTATGGTGAAAGGAGAAACTTTTGTCTTCCAGCGGTGTCCCCAGATATGATAGTGGAGGAGAGCCTGCAGAAGGGACTCTGTCCCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007249.15 |
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| CDS TCA 90 bp | AAGACAAAAGTTTCTCCTTTCACCATAAACTTCACCGACTGTCTTTaGGAACTGGAACACCTCCACAGCCCATGGGGCCAGTGGGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: KTKVSPFTINFTDCL*ELEHLHSPWGQWAG Trigger: TCCTGCCCACTGGCCCCATGGGCTGTGGAGGTGTTCCAGTTCTCAAAGACAGTCGGTGAAGTTTATGGTGAAAGGAGAAACTTTTGTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007249.15 |
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| CDS-3UTR CAA 90 bp | AATCGTGATTCTCAAGGCATTGACGGCAGGGCTTCTGTACAGGAGGGCTGCATTAACGTGAAGTTGATGTaGGGGAGTGGGAAACAACGT | + |
|
Preference number: 5 (lower is better) Translates to: NRDSQGIDGRASVQEGCINVKLM*GSGKQR Trigger: ACGTTGTTTCCCACTCCCCAACATCAACTTCACGTT...AATGCAGCCCTCCTGTACAGAAGCCCTGCCGTCAATGCCTTGAGAATCACGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS GCA 72 bp | AGCGAGCACCCCGACAATCAGCAGCAGCACCAGGGGTaGCGCCACCAGGCGCAGGAGGAGGATGAACAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SEHPDNQQQHQG*RHQAQEEDEQQ Trigger: CTGCTGTTCATCCTCCTCCTGCGCCTGGTGGCGGCACCCCTGGTGCTGCTGCTGATTGTCGGGGTGCTCGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS CCA 72 bp | TGTCGCCCACGCCGCAGTAGGCCCCCGTGGAGTTTCTaGGGTAGAGCACTTGCCGAGGGTCTCCATACACCC | + |
|
Preference number: 6 (lower is better) Translates to: CRPRRSRPPWSF*GRALAEGLHTP Trigger: GGGTGTATGGAGACCCTCGGCAAGTGCTCTACCCCAGAAACTCCACGGGGGCCTACTGCGGCGTGGGCGACA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007249.15 |
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| CDS CAA 72 bp | GCAGTAGGCCCCCGTGGAGTTTCTGGGGTAGAGCACTaGCCGAGGGTCTCCATACACCCAGGCCACAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: AVGPRGVSGVEH*PRVSIHPGHKP Trigger: GGGCTTGTGGCCTGGGTGTATGGAGACCCTCGGCAAGTGCTCTACCCCAGAAACTCCACGGGGGCCTACTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007249.15 |
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| CDS CCA 72 bp | TATCCTTGTTGTCGCCCACGCCGCAGTAGGCCCCCGTaGAGTTTCTGGGGTAGAGCACTTGCCGAGGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: YPCCRPRRSRPP*SFWGRALAEGL Trigger: GAGACCCTCGGCAAGTGCTCTACCCCAGAAACTCCACGGGGGCCTACTGCGGCGTGGGCGACAACAAGGATA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007249.15 |
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| CDS TCA 72 bp | CTGCACAAGGGACAGGATGAGGGCTCCAAACGCCAGTaGGCCAGTGTGGTAACGGAGTGTGCGGATGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LHKGQDEGSKRQ*ASVVTECADEG Trigger: GCCTTCATCCGCACACTCCGTTACCACACTGGCTCACTGGCGTTTGGAGCCCTCATCCTGTCCCTTGTGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS CCA 72 bp | TCACAGGAACGTTCTCACAGCCCGGTGTACTGGTGTTaGACGCCCAGTAGATGTACTGGGGTTGCCCGGATG | + |
|
Preference number: 6 (lower is better) Translates to: SQERSHSPVYWC*TPSRCTGVARM Trigger: CATCCGGGCAACCCCAGTACATCTACTGGGCGTCCAACACCAGTACACCGGGCTGTGAGAACGTTCCTGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS GCA 72 bp | CCCGAAACACTTGGTACTGTTGCCAGCAGTGGTAGATaGCATAGGCGAGCACAGCGAGCACCCCGACAATCA | + |
|
Preference number: 6 (lower is better) Translates to: PETLGTVASSGR*HRRAQRAPRQS Trigger: TGATTGTCGGGGTGCTCGCTGTGCTCGCCTATGGCATCTACCACTGCTGGCAACAGTACCAAGTGTTTCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS CCA 72 bp | CAGCGGGCCACAGGGTTCTGGGATCCTCTTAGCTTGTaGTCGATATACTCCAGGATAACCCGGGCTATCTGC | + |
|
Preference number: 6 (lower is better) Translates to: QRATGFWDPLSL*SIYSRITRAIC Trigger: GCAGATAGCCCGGGTTATCCTGGAGTATATCGACCACAAGCTAAGAGGATCCCAGAACCCTGTGGCCCGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS CCA 72 bp | GCTTCCTTCAGCAGAGCGATGGCGATCCGGATCCTCTaGCGCAGGAAAATGAGCATAAGCAACAAGATGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ASFSRAMAIRIL*RRKMSISNKMP Trigger: GGGCATCTTGTTGCTTATGCTCATTTTCCTGCGCCAGAGGATCCGGATCGCCATCGCTCTGCTGAAGGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS CCA 72 bp | TCATGTTCACAGGAACGTTCTCACAGCCCGGTGTACTaGTGTTGGACGCCCAGTAGATGTACTGGGGTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SCSQERSHSPVY*CWTPSRCTGVA Trigger: GGCAACCCCAGTACATCTACTGGGCGTCCAACACCAGTACACCGGGCTGTGAGAACGTTCCTGTGAACATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS CAA 72 bp | ATGCAGCGGGCCACAGGGTTCTGGGATCCTCTTAGCTaGTGGTCGATATACTCCAGGATAACCCGGGCTATC | + |
|
Preference number: 6 (lower is better) Translates to: MQRATGFWDPLS*WSIYSRITRAI Trigger: GATAGCCCGGGTTATCCTGGAGTATATCGACCACAAGCTAAGAGGATCCCAGAACCCTGTGGCCCGCTGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS GCA 72 bp | TTGTGGTCGATATACTCCAGGATAACCCGGGCTATCTaGACAAGGGACAGGATGAGGGCTCCAAACGCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LWSIYSRITRAI*TRDRMRAPNAS Trigger: ACTGGCGTTTGGAGCCCTCATCCTGTCCCTTGTGCAGATAGCCCGGGTTATCCTGGAGTATATCGACCACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS CCA 72 bp | CCTCATTCTTCTTGCCCAGAATCTTCAGGAGTGCCTTaGGCATGTAGTAAGGCCGCTCCTGGGAACCATCAT | + |
|
Preference number: 6 (lower is better) Translates to: PHSSCPESSGVP*ACSKAAPGNHH Trigger: ATGATGGTTCCCAGGAGCGGCCTTACTACATGCCCAAGGCACTCCTGAAGATTCTGGGCAAGAAGAATGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS CAA 90 bp | GAAGACAAAAGTTTCTCCTTTCACCATAAACTTCACCGACTGTCTTaGAGAACTGGAACACCTCCACAGCCCATGGGGCCAGTGGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: EDKSFSFHHKLHRLS*RTGTPPQPMGPVGR Trigger: CCTGCCCACTGGCCCCATGGGCTGTGGAGGTGTTCCAGTTCTCAAAGACAGTCGGTGAAGTTTATGGTGAAAGGAGAAACTTTTGTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007249.15 |
||
| CDS TCA 72 bp | GTTTCTCCTTTCACCATAAACTTCACCGACTGTCTTTaGGAACTGGAACACCTCCACAGCCCATGGGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VSPFTINFTDCL*ELEHLHSPWGQ Trigger: CTGGCCCCATGGGCTGTGGAGGTGTTCCAGTTCTCAAAGACAGTCGGTGAAGTTTATGGTGAAAGGAGAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007249.15 |
||
| CDS CAA 72 bp | GGGCACTGTAGGCCATTCTCAGCGATGGAGATGATGTaGATAGCTGCCGCACAGCTTAAGATGTCGAAGTAT | + |
|
Preference number: 6 (lower is better) Translates to: GHCRPFSAMEMM*IAAAQLKMSKY Trigger: ATACTTCGACATCTTAAGCTGTGCGGCAGCTATCAACATCATCTCCATCGCTGAGAATGGCCTACAGTGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007249.15 |
||
| CDS CAA 72 bp | TTGATCCGTAAGTCTTCAGGTAACGTGAAGTTGATGTaGGGGAGTGGGAAACAACGTCCCAGAGCTGGAGTA | + |
|
Preference number: 6 (lower is better) Translates to: LIRKSSGNVKLM*GSGKQRPRAGV Trigger: TACTCCAGCTCTGGGACGTTGTTTCCCACTCCCCAACATCAACTTCACGTTACCTGAAGACTTACGGATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS CAA 72 bp | AAATCTTCAAAGATCTTCACAGAGACATCCCGGGCATaGATGCTGTCCAGGAGGCCACTGATGCCATTAGAG | + |
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Preference number: 6 (lower is better) Translates to: KSSKIFTETSRA*MLSRRPLMPLE Trigger: CTCTAATGGCATCAGTGGCCTCCTGGACAGCATCAATGCCCGGGATGTCTCTGTGAAGATCTTTGAAGATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007249.15 ENSMUST00000169230.2 |
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| CDS CCA 72 bp | CAGGCTCTCCTCCACTATCATATCTGGGGACACCGCTaGAAGACAAAAGTTTCTCCTTTCACCATAAACTTC | + |
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Preference number: 6 (lower is better) Translates to: QALLHYHIWGHR*KTKVSPFTINF Trigger: GAAGTTTATGGTGAAAGGAGAAACTTTTGTCTTCCAGCGGTGTCCCCAGATATGATAGTGGAGGAGAGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007249.15 |
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