Pregenerated sensors for SLC44A3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039865Ensembl transcript IDs: ENSMUST00000039197.9
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGACAACTTAGAGGAACTGATTCTCTCCTTTTACCATGTGGGTCCTaGGGTATTCAGTTCCTCGGGTTGGCAACTGGCACCTTTATCCAG | + |
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Preference number: 1 (lower is better) Translates to: GQLRGTDSLLLPCGS*GIQFLGLATGTFIQ Trigger: CTGGATAAAGGTGCCAGTTGCCAACCCGAGGAACTGAATACCCCAGGACCCACATGGTAAAAGGAGAGAATCAGTTCCTCTAAGTTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| 3UTR-3UTR TCA 90 bp | TCTGAGGACAACTTAGAGGAACTGATTCTCTCCTTTTACCATGTGGGTCCTGGGAGCCTCTTCCAGTTTTaGATTACAGATGTGTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: SEDNLEELILSFYHVGPGSLFQF*ITDVCP Trigger: GGGACACACATCTGTAATTCAAAACTGGAAGAGGCT...CCCAGGACCCACATGGTAAAAGGAGAGAATCAGTTCCTCTAAGTTGTCCTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| 3UTR CCA 72 bp | TACCATGTGGGTCCTGGGGTATTCAGTTCCTCGGGTTaGCAACTGGCACCTTTATCCAGTGAGCCAACCTTA | + |
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Preference number: 3 (lower is better) Translates to: YHVGPGVFSSSG*QLAPLSSEPTL Trigger: TAAGGTTGGCTCACTGGATAAAGGTGCCAGTTGCCAACCCGAGGAACTGAATACCCCAGGACCCACATGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| 3UTR CCA 72 bp | AGAGGAACTGATTCTCTCCTTTTACCATGTGGGTCCTaGGGTATTCAGTTCCTCGGGTTGGCAACTGGCACC | + |
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Preference number: 3 (lower is better) Translates to: RGTDSLLLPCGS*GIQFLGLATGT Trigger: GGTGCCAGTTGCCAACCCGAGGAACTGAATACCCCAGGACCCACATGGTAAAAGGAGAGAATCAGTTCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| 3UTR CCA 72 bp | TGGGTCCTGGGGTATTCAGTTCCTCGGGTTGGCAACTaGCACCTTTATCCAGTGAGCCAACCTTATTTGTTT | + |
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Preference number: 3 (lower is better) Translates to: WVLGYSVPRVGN*HLYPVSQPYLF Trigger: AAACAAATAAGGTTGGCTCACTGGATAAAGGTGCCAGTTGCCAACCCGAGGAACTGAATACCCCAGGACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| 3UTR GCA 72 bp | CCTCTTCCAGTTTTGAATTACAGATGTGTGTCCCTGTaGCCAGCCAATATTGTGCCTTTTAAATTGATGCAT | + |
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Preference number: 3 (lower is better) Translates to: PLPVLNYRCVSL*PANIVPFKLMH Trigger: ATGCATCAATTTAAAAGGCACAATATTGGCTGGGCACAGGGACACACATCTGTAATTCAAAACTGGAAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR CCA 90 bp | TTGGTGGTGGTGGTGGGGCTGAGTGAGTGCACTCGGGGCAGTTCACATGTGGAGGGAAGGCGAACAACATaGCCAGAGACAGGGCGAATG | + |
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Preference number: 4 (lower is better) Translates to: LVVVVGLSECTRGSSHVEGRRTT*PETGRM Trigger: CATTCGCCCTGTCTCTGGCCATGTTGTTCGCCTTCC...CTCCACATGTGAACTGCCCCGAGTGCACTCACTCAGCCCCACCACCACCACCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR GCA 90 bp | TTACCATGTGGGTCCTGGGGTATTCAGTTCCTCGGGTTGGCAACTGGCACCTTTGGGCAGTACCAGCAGTaGCCAGGCTCAGCAGCACAG | + |
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Preference number: 4 (lower is better) Translates to: LPCGSWGIQFLGLATGTFGQYQQ*PGSAAQ Trigger: CTGTGCTGCTGAGCCTGGGCACTGCTGGTACTGCCC...AAAGGTGCCAGTTGCCAACCCGAGGAACTGAATACCCCAGGACCCACATGGTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR CCA 90 bp | CTTTTACCATGTGGGTCCTGGGGTATTCAGTTCCTCGGGTTGGCAACTGGCACCGCTTCTCAGGACAGCTaGATACACAGAGGGCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: LLPCGSWGIQFLGLATGTASQDS*IHRGLW Trigger: CCACAGCCCTCTGTGTATCCAGCTGTCCTGAGAAGC...GGTGCCAGTTGCCAACCCGAGGAACTGAATACCCCAGGACCCACATGGTAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR CCA 90 bp | TTACCATGTGGGTCCTGGGGTATTCAGTTCCTCGGGTTGGCAACTGGCACCTTTGGCACACGTCCACAGTaGCTGGAACAGCAGGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: LPCGSWGIQFLGLATGTFGTRPQ*LEQQER Trigger: CCTTTCCTGCTGTTCCAGCCACTGTGGACGTGTGCC...AAAGGTGCCAGTTGCCAACCCGAGGAACTGAATACCCCAGGACCCACATGGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR GCA 90 bp | TTGGTGGTGGTGGTGGGGCTGAGTGAGTGCACTCGGGGCAGTTCACATGTGGAGGGTCGCCATTCTCTTTaGCTTGTTTTCTCTGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: LVVVVGLSECTRGSSHVEGRHSL*LVFSAE Trigger: TTCTGCAGAGAAAACAAGGCAAAGAGAATGGCGACC...CTCCACATGTGAACTGCCCCGAGTGCACTCACTCAGCCCCACCACCACCACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR GCA 90 bp | CCATGTGGGTCCTGGGGTATTCAGTTCCTCGGGTTGGCAACTGGCACCTTTATCTCCAGAGTGTCCAGCTaGTTCTCAGGACAGCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: PCGSWGIQFLGLATGTFISRVSS*FSGQLD Trigger: ATCCAGCTGTCCTGAGAAGCAGCTGGACACTCTGGA...GATAAAGGTGCCAGTTGCCAACCCGAGGAACTGAATACCCCAGGACCCACATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR GCA 90 bp | TTGGTGGTGGTGGTGGGGCTGAGTGAGTGCACTCGGGGCAGTTCACATGTGGAGTGTGTGCGCATCTTTTaGGGATGTACAAAAGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: LVVVVGLSECTRGSSHVECVRIF*GCTKVC Trigger: ACAGACTTTTGTACATCCGCAAAAGATGCGCACACA...CTCCACATGTGAACTGCCCCGAGTGCACTCACTCAGCCCCACCACCACCACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR TCA 90 bp | TTGGTGGTGGTGGTGGGGCTGAGTGAGTGCACTCGGGGCAGTTCACATGTGGAGTTGAATTCTTGGCTATaGTTGTGTGCGCATCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: LVVVVGLSECTRGSSHVELNSWL*LCAHLL Trigger: CAAAAGATGCGCACACAATCATAGCCAAGAATTCAA...CTCCACATGTGAACTGCCCCGAGTGCACTCACTCAGCCCCACCACCACCACCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR GCA 90 bp | GAGGAACTGATTCTCTCCTTTTACCATGTGGGTCCTGGGGTATTCAGTTCCTCGATAAGGGAAAGGGCTTaGTTGGAGGAACCGGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: EELILSFYHVGPGVFSSSIRERA*LEEPGA Trigger: GGCTCCCGGTTCCTCCAAGCAAGCCCTTTCCCTTAT...CGAGGAACTGAATACCCCAGGACCCACATGGTAAAAGGAGAGAATCAGTTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR CCA 90 bp | TTACCATGTGGGTCCTGGGGTATTCAGTTCCTCGGGTTGGCAACTGGCACCTTTGGCTTATATTCCACTTaGCCACCTTCCATCACCTGG | + |
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Preference number: 4 (lower is better) Translates to: LPCGSWGIQFLGLATGTFGLYST*PPSITW Trigger: CCAGGTGATGGAAGGTGGCCAAGTGGAATATAAGCC...AAAGGTGCCAGTTGCCAACCCGAGGAACTGAATACCCCAGGACCCACATGGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR CCA 90 bp | TTGGTGGTGGTGGTGGGGCTGAGTGAGTGCACTCGGGGCAGTTCACATGTGGAGGCATCCTGGTTGAGATaGTACAGATATTTAAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: LVVVVGLSECTRGSSHVEASWLR*YRYLRR Trigger: TCTCCTTAAATATCTGTACCATCTCAACCAGGATGC...CTCCACATGTGAACTGCCCCGAGTGCACTCACTCAGCCCCACCACCACCACCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR GCA 90 bp | TTACCATGTGGGTCCTGGGGTATTCAGTTCCTCGGGTTGGCAACTGGCACCTTTAGTCATCCGCTGGCATaGAAGGATGAATTCGCTAGT | + |
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Preference number: 4 (lower is better) Translates to: LPCGSWGIQFLGLATGTFSHPLA*KDEFAS Trigger: ACTAGCGAATTCATCCTTGCATGCCAGCGGATGACT...AAAGGTGCCAGTTGCCAACCCGAGGAACTGAATACCCCAGGACCCACATGGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR TCA 90 bp | CGGGTTGGCAACTGGCACCTTTATCCAGTGAGCCAACCTTATTTGTTTGTTTGTTCTGAATTCACCTCTTaGCCAAGCACTGCGCTGCGG | + |
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Preference number: 4 (lower is better) Translates to: RVGNWHLYPVSQPYLFVCSEFTS*PSTALR Trigger: CCGCAGCGCAGTGCTTGGTCAAGAGGTGAATTCAGA...ACAAACAAACAAATAAGGTTGGCTCACTGGATAAAGGTGCCAGTTGCCAACCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR TCA 90 bp | CATGTGGGTCCTGGGGTATTCAGTTCCTCGGGTTGGCAACTGGCACCTTTATCCCCTTTCCCAGGAAAATaGCAAAGTTTCCAAAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: HVGPGVFSSSGWQLAPLSPFPGK*QSFQSS Trigger: ACTGCTTTGGAAACTTTGTCATTTTCCTGGGAAAGG...GGATAAAGGTGCCAGTTGCCAACCCGAGGAACTGAATACCCCAGGACCCACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR CCA 90 bp | TCTGAGGACAACTTAGAGGAACTGATTCTCTCCTTTTACCATGTGGGTCCTGGGATACACAGAGGGCTGTaGGACCAAGACCCCTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: SEDNLEELILSFYHVGPGIHRGL*DQDPCL Trigger: AAGACAGGGGTCTTGGTCCCACAGCCCTCTGTGTAT...CCCAGGACCCACATGGTAAAAGGAGAGAATCAGTTCCTCTAAGTTGTCCTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR CCA 90 bp | TCTGAGGACAACTTAGAGGAACTGATTCTCTCCTTTTACCATGTGGGTCCTGGGGAGAGACGAAAGGATTaGACGGGCAGGAGGGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: SEDNLEELILSFYHVGPGERRKD*TGRRVI Trigger: AATGACCCTCCTGCCCGTCCAATCCTTTCGTCTCTC...CCCAGGACCCACATGGTAAAAGGAGAGAATCAGTTCCTCTAAGTTGTCCTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR TCA 90 bp | CGGGTTGGCAACTGGCACCTTTATCCAGTGAGCCAACCTTATTTGTTTGTTTGTGGACCCAGAAGAAAATaGGGATGGCACACGTCCACA | + |
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Preference number: 4 (lower is better) Translates to: RVGNWHLYPVSQPYLFVCGPRRK*GWHTST Trigger: TGTGGACGTGTGCCATCCTCATTTTCTTCTGGGTCC...ACAAACAAACAAATAAGGTTGGCTCACTGGATAAAGGTGCCAGTTGCCAACCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR CCA 90 bp | TCTGAGGACAACTTAGAGGAACTGATTCTCTCCTTTTACCATGTGGGTCCTGGGGCTACAGTCATCCGCTaGCATGCAAGGATGAATTCG | + |
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Preference number: 4 (lower is better) Translates to: SEDNLEELILSFYHVGPGATVIR*HARMNS Trigger: CGAATTCATCCTTGCATGCCAGCGGATGACTGTAGC...CCCAGGACCCACATGGTAAAAGGAGAGAATCAGTTCCTCTAAGTTGTCCTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR CCA 90 bp | GAGGAACTGATTCTCTCCTTTTACCATGTGGGTCCTGGGGTATTCAGTTCCTCGTATCTCACAATGGGCTaGAGTTCTGTCCCCTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: EELILSFYHVGPGVFSSSYLTMG*SSVPSS Trigger: TGAAGAGGGGACAGAACTCCAGCCCATTGTGAGATA...CGAGGAACTGAATACCCCAGGACCCACATGGTAAAAGGAGAGAATCAGTTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR GCA 90 bp | TGGCAACTGGCACCTTTATCCAGTGAGCCAACCTTATTTGTTTGTTTGTTTATAGAGGAGTCTTCCTGCTaGCCCGGCCACCACCGAATA | + |
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Preference number: 4 (lower is better) Translates to: WQLAPLSSEPTLFVCLFIEESSC*PGHHRI Trigger: TATTCGGTGGTGGCCGGGGCAGCAGGAAGACTCCTC...TATAAACAAACAAACAAATAAGGTTGGCTCACTGGATAAAGGTGCCAGTTGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR GCA 90 bp | TGGCAACTGGCACCTTTATCCAGTGAGCCAACCTTATTTGTTTGTTTGTTTATAAAAGAGGAGTCTTCCTaGTGCCCCGGCCACCACCGA | + |
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Preference number: 4 (lower is better) Translates to: WQLAPLSSEPTLFVCLFIKEESS*CPGHHR Trigger: TCGGTGGTGGCCGGGGCAGCAGGAAGACTCCTCTTT...TATAAACAAACAAACAAATAAGGTTGGCTCACTGGATAAAGGTGCCAGTTGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR TCA 90 bp | GGACAACTTAGAGGAACTGATTCTCTCCTTTTACCATGTGGGTCCTGGGGTATTCAAGACCCCTGTCTTTaGCTTCAAGATTGCAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: GQLRGTDSLLLPCGSWGIQDPCL*LQDCRH Trigger: ATGCCTGCAATCTTGAAGTCAAAGACAGGGGTCTTG...AATACCCCAGGACCCACATGGTAAAAGGAGAGAATCAGTTCCTCTAAGTTGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR GCA 90 bp | GAGGAACTGATTCTCTCCTTTTACCATGTGGGTCCTGGGGTATTCAGTTCCTCGGCCACGGTGTATCGGTaGATTTTCTATAAATTTGGG | + |
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Preference number: 4 (lower is better) Translates to: EELILSFYHVGPGVFSSSATVYR*IFYKFG Trigger: CCCAAATTTATAGAAAATGCACCGATACACCGTGGC...CGAGGAACTGAATACCCCAGGACCCACATGGTAAAAGGAGAGAATCAGTTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR CCA 90 bp | GATGCATATAGACATAGTTTTAACATCTTCCGTGCTCTAGTTCACGTGAAAACACCACCTTCCATCACCTaGGCAGTACCAGCAGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: DAYRHSFNIFRALVHVKTPPSIT*AVPAVP Trigger: GGGCACTGCTGGTACTGCCCAGGTGATGGAAGGTGG...TGTTTTCACGTGAACTAGAGCACGGAAGATGTTAAAACTATGTCTATATGCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR GCA 90 bp | GGACAACTTAGAGGAACTGATTCTCTCCTTTTACCATGTGGGTCCTGGGGTATTTCTTGCCACACACGTTaGCAAAGCTGTCATATCCAA | + |
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Preference number: 4 (lower is better) Translates to: GQLRGTDSLLLPCGSWGISCHTR*QSCHIQ Trigger: TTGGATATGACAGCTTTGGCAACGTGTGTGGCAAGA...AATACCCCAGGACCCACATGGTAAAAGGAGAGAATCAGTTCCTCTAAGTTGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR CCA 90 bp | CGGGTTGGCAACTGGCACCTTTATCCAGTGAGCCAACCTTATTTGTTTGTTTGTGCTTTGTTTGTGACGTaGAGAAGCTCAACTGTCAAT | + |
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Preference number: 4 (lower is better) Translates to: RVGNWHLYPVSQPYLFVCALFVT*RSSTVN Trigger: ATTGACAGTTGAGCTTCTCCACGTCACAAACAAAGC...ACAAACAAACAAATAAGGTTGGCTCACTGGATAAAGGTGCCAGTTGCCAACCCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR CCA 90 bp | GGACAACTTAGAGGAACTGATTCTCTCCTTTTACCATGTGGGTCCTGGGGTATTCATGAAAATGACTCTTaGGATCCTTGTCACAGTGAG | + |
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Preference number: 4 (lower is better) Translates to: GQLRGTDSLLLPCGSWGIHENDS*DPCHSE Trigger: CTCACTGTGACAAGGATCCCAAGAGTCATTTTCATG...AATACCCCAGGACCCACATGGTAAAAGGAGAGAATCAGTTCCTCTAAGTTGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR TCA 90 bp | ATTGATGCATATAGACATAGTTTTAACATCTTCCGTGCTCTAGTTCACGTGAAAGACCCCCGAAAATGCTaGAGCACACCACTAGCACCT | + |
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Preference number: 4 (lower is better) Translates to: IDAYRHSFNIFRALVHVKDPRKC*STPLAP Trigger: AGGTGCTAGTGGTGTGCTTCAGCATTTTCGGGGGTC...TTTCACGTGAACTAGAGCACGGAAGATGTTAAAACTATGTCTATATGCATCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR CCA 90 bp | GATGCATATAGACATAGTTTTAACATCTTCCGTGCTCTAGTTCACGTGAAAACAATGTTGGCAAAAAGCTaGACCTCTTCCAGAGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: DAYRHSFNIFRALVHVKTMLAKS*TSSRVS Trigger: GGACACTCTGGAAGAGGTCCAGCTTTTTGCCAACAT...TGTTTTCACGTGAACTAGAGCACGGAAGATGTTAAAACTATGTCTATATGCATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR CCA 90 bp | TGGCAACTGGCACCTTTATCCAGTGAGCCAACCTTATTTGTTTGTTTGTTTATAAAGGAGATGATAATGTaGATCAGAAGGGTCGAGATG | + |
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Preference number: 4 (lower is better) Translates to: WQLAPLSSEPTLFVCLFIKEMIM*IRRVEM Trigger: CATCTCGACCCTTCTGATCCACATTATCATCTCCTT...TATAAACAAACAAACAAATAAGGTTGGCTCACTGGATAAAGGTGCCAGTTGCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR TCA 90 bp | ATTGATGCATATAGACATAGTTTTAACATCTTCCGTGCTCTAGTTCACGTGAAAGGATCCTTGTCACAGTaGGTAAAAATGACCCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: IDAYRHSFNIFRALVHVKGSLSQ*VKMTLS Trigger: TGAAAGGGTCATTTTTACTCACTGTGACAAGGATCC...TTTCACGTGAACTAGAGCACGGAAGATGTTAAAACTATGTCTATATGCATCAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR GCA 90 bp | ATTGATGCATATAGACATAGTTTTAACATCTTCCGTGCTCTAGTTCACGTGAAATTGGCTATGATTGTGTaGGCATCTTTTGCGGATGTA | + |
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Preference number: 4 (lower is better) Translates to: IDAYRHSFNIFRALVHVKLAMIV*ASFADV Trigger: TACATCCGCAAAAGATGCGCACACAATCATAGCCAA...TTTCACGTGAACTAGAGCACGGAAGATGTTAAAACTATGTCTATATGCATCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR CCA 90 bp | GATGCATATAGACATAGTTTTAACATCTTCCGTGCTCTAGTTCACGTGAAAACATTTGTCCTTGAGACTTaGCATTGTTCAAGTTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: DAYRHSFNIFRALVHVKTFVLET*HCSSCW Trigger: CCAACAACTTGAACAATGCCAAGTCTCAAGGACAAA...TGTTTTCACGTGAACTAGAGCACGGAAGATGTTAAAACTATGTCTATATGCATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS TCA 90 bp | TGCCCAGGCTCAGCAGCACAGCCACCCAGAGGACCCAGAAGAAAATaGGGATGGCACACGTCCACAGTGGCTGGAACAGCAGGAAAGGAC | + |
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Preference number: 5 (lower is better) Translates to: CPGSAAQPPRGPRRK*GWHTSTVAGTAGKD Trigger: GTCCTTTCCTGCTGTTCCAGCCACTGTGGACGTGTGCCATCCTCATTTTCTTCTGGGTCCTCTGGGTGGCTGTGCTGCTGAGCCTGGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR CAA 90 bp | CCATGTGGGTCCTGGGGTATTCAGTTCCTCGGGTTGGCAACTGGCACCTTTATCACTGGGGAGTTCTTCTaGCCACACACGTTGCCAAAG | + |
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Preference number: 5 (lower is better) Translates to: PCGSWGIQFLGLATGTFITGEFF*PHTLPK Trigger: CTTTGGCAACGTGTGTGGCAAGAAGAACTCCCCAGT...GATAAAGGTGCCAGTTGCCAACCCGAGGAACTGAATACCCCAGGACCCACATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR CAA 90 bp | TTACCATGTGGGTCCTGGGGTATTCAGTTCCTCGGGTTGGCAACTGGCACCTTTAATAAGGGAAAGGGCTaGCTTGGAGGAACCGGGAGC | + |
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Preference number: 5 (lower is better) Translates to: LPCGSWGIQFLGLATGTFNKGKG*LGGTGS Trigger: GCTCCCGGTTCCTCCAAGCAAGCCCTTTCCCTTATT...AAAGGTGCCAGTTGCCAACCCGAGGAACTGAATACCCCAGGACCCACATGGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS CCA 90 bp | TGGTTGAGATGGTACAGATATTTAAGGAGACACCAAAGCCCACAGTaGCTGCATCTGAATTCACCTCTTGACCAAGCACTGCGCTGCGGC | + |
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Preference number: 5 (lower is better) Translates to: WLRWYRYLRRHQSPQ*LHLNSPLDQALRCG Trigger: GCCGCAGCGCAGTGCTTGGTCAAGAGGTGAATTCAGATGCAGCCACTGTGGGCTTTGGTGTCTCCTTAAATATCTGTACCATCTCAACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS TCA 90 bp | GAGACGAAAGGATTGGACGGGCAGGAGGGTCATTTTGATTCCTGTTaGAATAACAAGCAACCATTGCTCCTGCTACAGTCATCCGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: ETKGLDGQEGHFDSC*NNKQPLLLLQSSAG Trigger: GCCAGCGGATGACTGTAGCAGGAGCAATGGTTGCTTGTTATTTCAACAGGAATCAAAATGACCCTCCTGCCCGTCCAATCCTTTCGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS CCA 90 bp | AAACTATACACACACAGGAAAGAGCCGTTGATGTTGGCAAAAAGCTaGACCTCTTCCAGAGTGTCCAGCTGCTTCTCAGGACAGCTGGAT | + |
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Preference number: 5 (lower is better) Translates to: KLYTHRKEPLMLAKS*TSSRVSSCFSGQLD Trigger: ATCCAGCTGTCCTGAGAAGCAGCTGGACACTCTGGAAGAGGTCCAGCTTTTTGCCAACATCAACGGCTCTTTCCTGTGTGTGTATAGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS CCA 90 bp | TCTGTCCCGTTAATGGCAGTTGCAGTGTACGCATCCTGGTTGAGATaGTACAGATATTTAAGGAGACACCAAAGCCCACAGTGGCTGCAT | + |
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Preference number: 5 (lower is better) Translates to: SVPLMAVAVYASWLR*YRYLRRHQSPQWLH Trigger: ATGCAGCCACTGTGGGCTTTGGTGTCTCCTTAAATATCTGTACCATCTCAACCAGGATGCGTACACTGCAACTGCCATTAACGGGACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS GCA 90 bp | GGCAGGAGGGTCATTTTGATTCCTGTTGAAATAACAAGCAACCATTaGTCCTGCTACAGTCATCCGCTGGCATGCAAGGATGAATTCGCT | + |
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Preference number: 5 (lower is better) Translates to: GRRVILIPVEITSNH*SCYSHPLACKDEFA Trigger: AGCGAATTCATCCTTGCATGCCAGCGGATGACTGTAGCAGGAGCAATGGTTGCTTGTTATTTCAACAGGAATCAAAATGACCCTCCTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR CAA 90 bp | GAGGAACTGATTCTCTCCTTTTACCATGTGGGTCCTGGGGTATTCAGTTCCTCGGCCATTCTCTTTGCCTaGTTTTCTCTGCAGAAACCA | + |
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Preference number: 5 (lower is better) Translates to: EELILSFYHVGPGVFSSSAILFA*FSLQKP Trigger: TGGTTTCTGCAGAGAAAACAAGGCAAAGAGAATGGC...CGAGGAACTGAATACCCCAGGACCCACATGGTAAAAGGAGAGAATCAGTTCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR CAA 90 bp | TTACCATGTGGGTCCTGGGGTATTCAGTTCCTCGGGTTGGCAACTGGCACCTTTGCATTTTCTATAAATTaGGGGTCGCCATTCTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: LPCGSWGIQFLGLATGTFAFSIN*GSPFSL Trigger: CAAAGAGAATGGCGACCCCAAATTTATAGAAAATGC...AAAGGTGCCAGTTGCCAACCCGAGGAACTGAATACCCCAGGACCCACATGGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS CCA 90 bp | GTACAAAAGTCTGTCCCGTTAATGGCAGTTGCAGTGTACGCATCCTaGTTGAGATGGTACAGATATTTAAGGAGACACCAAAGCCCACAG | + |
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Preference number: 5 (lower is better) Translates to: VQKSVPLMAVAVYAS*LRWYRYLRRHQSPQ Trigger: CTGTGGGCTTTGGTGTCTCCTTAAATATCTGTACCATCTCAACCAGGATGCGTACACTGCAACTGCCATTAACGGGACAGACTTTTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR CAA 90 bp | TTACCATGTGGGTCCTGGGGTATTCAGTTCCTCGGGTTGGCAACTGGCACCTTTTCTTTGACTTCAAGATaGCAGGCATTCATAAAGAAC | + |
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Preference number: 5 (lower is better) Translates to: LPCGSWGIQFLGLATGTFSLTSR*QAFIKN Trigger: GTTCTTTATGAATGCCTGCAATCTTGAAGTCAAAGA...AAAGGTGCCAGTTGCCAACCCGAGGAACTGAATACCCCAGGACCCACATGGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS GCA 90 bp | AGGGTCATTTTGATTCCTGTTGAAATAACAAGCAACCATTGCTCCTaGTACAGTCATCCGCTGGCATGCAAGGATGAATTCGCTAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: RVILIPVEITSNHCS*YSHPLACKDEFASP Trigger: TGGACTAGCGAATTCATCCTTGCATGCCAGCGGATGACTGTAGCAGGAGCAATGGTTGCTTGTTATTTCAACAGGAATCAAAATGACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS CCA 90 bp | TGGAACAGCAGGAAAGGACAGCTGCTGATGGCTTTGTTTGTGACGTaGAGAAGCTCAACTGTCAATTTTATCCTCTTCCTGAGGGTAAAA | + |
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Preference number: 5 (lower is better) Translates to: WNSRKGQLLMALFVT*RSSTVNFILFLRVK Trigger: TTTTACCCTCAGGAAGAGGATAAAATTGACAGTTGAGCTTCTCCACGTCACAAACAAAGCCATCAGCAGCTGTCCTTTCCTGCTGTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR CAA 90 bp | TGGCAACTGGCACCTTTATCCAGTGAGCCAACCTTATTTGTTTGTTTGTTTATAAGAGAGACGAAAGGATaGGACGGGCAGGAGGGTCAT | + |
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Preference number: 5 (lower is better) Translates to: WQLAPLSSEPTLFVCLFIRETKG*DGQEGH Trigger: ATGACCCTCCTGCCCGTCCAATCCTTTCGTCTCTCT...TATAAACAAACAAACAAATAAGGTTGGCTCACTGGATAAAGGTGCCAGTTGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR CAA 90 bp | GAGGAACTGATTCTCTCCTTTTACCATGTGGGTCCTGGGGTATTCAGTTCCTCGGCATTGTTCAAGTTGTaGGTCCGTTTTATAACACTC | + |
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Preference number: 5 (lower is better) Translates to: EELILSFYHVGPGVFSSSALFKL*VRFITL Trigger: GAGTGTTATAAAACGGACCAACAACTTGAACAATGC...CGAGGAACTGAATACCCCAGGACCCACATGGTAAAAGGAGAGAATCAGTTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS CCA 90 bp | AGTTCCTTGATGGTAGCAGAAAAGTACGAAGAGAGACGAAAGGATTaGACGGGCAGGAGGGTCATTTTGATTCCTGTTGAAATAACAAGC | + |
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Preference number: 5 (lower is better) Translates to: SSLMVAEKYEERRKD*TGRRVILIPVEITS Trigger: GCTTGTTATTTCAACAGGAATCAAAATGACCCTCCTGCCCGTCCAATCCTTTCGTCTCTCTTCGTACTTTTCTGCTACCATCAAGGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR CAA 90 bp | TGGCAACTGGCACCTTTATCCAGTGAGCCAACCTTATTTGTTTGTTTGTTTATACCAAGACCCCTGTCTTaGACTTCAAGATTGCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: WQLAPLSSEPTLFVCLFIPRPLS*TSRLQA Trigger: TGCCTGCAATCTTGAAGTCAAAGACAGGGGTCTTGG...TATAAACAAACAAACAAATAAGGTTGGCTCACTGGATAAAGGTGCCAGTTGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR CAA 90 bp | GATGCATATAGACATAGTTTTAACATCTTCCGTGCTCTAGTTCACGTGAAAACACAGCTGCTGATGGCTTaGTTTGTGACGTGGAGAAGC | + |
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Preference number: 5 (lower is better) Translates to: DAYRHSFNIFRALVHVKTQLLMA*FVTWRS Trigger: GCTTCTCCACGTCACAAACAAAGCCATCAGCAGCTG...TGTTTTCACGTGAACTAGAGCACGGAAGATGTTAAAACTATGTCTATATGCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR CAA 90 bp | TGGCAACTGGCACCTTTATCCAGTGAGCCAACCTTATTTGTTTGTTTGTTTATATTCTTGCCACACACGTaGCCAAAGCTGTCATATCCA | + |
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Preference number: 5 (lower is better) Translates to: WQLAPLSSEPTLFVCLFIFLPHT*PKLSYP Trigger: TGGATATGACAGCTTTGGCAACGTGTGTGGCAAGAA...TATAAACAAACAAACAAATAAGGTTGGCTCACTGGATAAAGGTGCCAGTTGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR CAA 90 bp | GATGCATATAGACATAGTTTTAACATCTTCCGTGCTCTAGTTCACGTGAAAACAAGGCTTATATTCCACTaGGCCACCTTCCATCACCTG | + |
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Preference number: 5 (lower is better) Translates to: DAYRHSFNIFRALVHVKTRLIFH*ATFHHL Trigger: CAGGTGATGGAAGGTGGCCAAGTGGAATATAAGCCT...TGTTTTCACGTGAACTAGAGCACGGAAGATGTTAAAACTATGTCTATATGCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR CAA 90 bp | GATGCATATAGACATAGTTTTAACATCTTCCGTGCTCTAGTTCACGTGAAAACAAAAGAGCCGTTGATGTaGGCAAAAAGCTGGACCTCT | + |
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Preference number: 5 (lower is better) Translates to: DAYRHSFNIFRALVHVKTKEPLM*AKSWTS Trigger: AGAGGTCCAGCTTTTTGCCAACATCAACGGCTCTTT...TGTTTTCACGTGAACTAGAGCACGGAAGATGTTAAAACTATGTCTATATGCATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS-3UTR CAA 90 bp | TGGCAACTGGCACCTTTATCCAGTGAGCCAACCTTATTTGTTTGTTTGTTTATAGGCAGGAGGGTCATTTaGATTCCTGTTGAAATAACA | + |
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Preference number: 5 (lower is better) Translates to: WQLAPLSSEPTLFVCLFIGRRVI*IPVEIT Trigger: TGTTATTTCAACAGGAATCAAAATGACCCTCCTGCC...TATAAACAAACAAACAAATAAGGTTGGCTCACTGGATAAAGGTGCCAGTTGCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS TCA 72 bp | TCAGCAGCACAGCCACCCAGAGGACCCAGAAGAAAATaGGGATGGCACACGTCCACAGTGGCTGGAACAGCA | + |
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Preference number: 6 (lower is better) Translates to: SAAQPPRGPRRK*GWHTSTVAGTA Trigger: TGCTGTTCCAGCCACTGTGGACGTGTGCCATCCTCATTTTCTTCTGGGTCCTCTGGGTGGCTGTGCTGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS TCA 72 bp | CCAAAGCCCACAGTGGCTGCATCTGAATTCACCTCTTaGCCAAGCACTGCGCTGCGGCTCTTTCAGAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: PKPTVAASEFTS*PSTALRLFQSA Trigger: AGCACTCTGAAAGAGCCGCAGCGCAGTGCTTGGTCAAGAGGTGAATTCAGATGCAGCCACTGTGGGCTTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS GCA 72 bp | GCCAAAGCTGTCATATCCAAAGAGGAGTCTTCCTGCTaGCCCGGCCACCACCGAATAACCCATGATGAACAC | + |
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Preference number: 6 (lower is better) Translates to: AKAVISKEESSC*PGHHRITHDEH Trigger: GTGTTCATCATGGGTTATTCGGTGGTGGCCGGGGCAGCAGGAAGACTCCTCTTTGGATATGACAGCTTTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS CCA 72 bp | ATAAGGGAAAGGGCTTGCTTGGAGGAACCGGGAGCCTaGGACACAGTGTGTCTGCACTTGAACTCTGAGTGT | + |
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Preference number: 6 (lower is better) Translates to: IRERACLEEPGA*DTVCLHLNSEC Trigger: ACACTCAGAGTTCAAGTGCAGACACACTGTGTCCCAGGCTCCCGGTTCCTCCAAGCAAGCCCTTTCCCTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS GCA 72 bp | GTTGCCAAAGCTGTCATATCCAAAGAGGAGTCTTCCTaGTGCCCCGGCCACCACCGAATAACCCATGATGAA | + |
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Preference number: 6 (lower is better) Translates to: VAKAVISKEESS*CPGHHRITHDE Trigger: TTCATCATGGGTTATTCGGTGGTGGCCGGGGCAGCAGGAAGACTCCTCTTTGGATATGACAGCTTTGGCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS CCA 72 bp | ACACACAGGAAAGAGCCGTTGATGTTGGCAAAAAGCTaGACCTCTTCCAGAGTGTCCAGCTGCTTCTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: THRKEPLMLAKS*TSSRVSSCFSG Trigger: TCCTGAGAAGCAGCTGGACACTCTGGAAGAGGTCCAGCTTTTTGCCAACATCAACGGCTCTTTCCTGTGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS CAA 72 bp | CATATACCGAATGCCGGAAAGAGGCTTATATTCCACTaGGCCACCTTCCATCACCTGGGCAGTACCAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: HIPNAGKRLIFH*ATFHHLGSTSS Trigger: ACTGCTGGTACTGCCCAGGTGATGGAAGGTGGCCAAGTGGAATATAAGCCTCTTTCCGGCATTCGGTATATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS CAA 90 bp | GTCCACAGTGGCTGGAACAGCAGGAAAGGACAGCTGCTGATGGCTTaGTTTGTGACGTGGAGAAGCTCAACTGTCAATTTTATCCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: VHSGWNSRKGQLLMA*FVTWRSSTVNFILF Trigger: GAAGAGGATAAAATTGACAGTTGAGCTTCTCCACGTCACAAACAAAGCCATCAGCAGCTGTCCTTTCCTGCTGTTCCAGCCACTGTGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS CAA 72 bp | GATACACAGAGGGCTGTGGGACCAAGACCCCTGTCTTaGACTTCAAGATTGCAGGCATTCATAAAGAACACG | + |
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Preference number: 6 (lower is better) Translates to: DTQRAVGPRPLS*TSRLQAFIKNT Trigger: CGTGTTCTTTATGAATGCCTGCAATCTTGAAGTCAAAGACAGGGGTCTTGGTCCCACAGCCCTCTGTGTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS TCA 72 bp | GGATTGGACGGGCAGGAGGGTCATTTTGATTCCTGTTaGAATAACAAGCAACCATTGCTCCTGCTACAGTCA | + |
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Preference number: 6 (lower is better) Translates to: GLDGQEGHFDSC*NNKQPLLLLQS Trigger: TGACTGTAGCAGGAGCAATGGTTGCTTGTTATTTCAACAGGAATCAAAATGACCCTCCTGCCCGTCCAATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS GCA 72 bp | TGCGGATGTACAAAAGTCTGTCCCGTTAATGGCAGTTaGAGTGTACGCATCCTGGTTGAGATGGTACAGATA | + |
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Preference number: 6 (lower is better) Translates to: CGCTKVCPVNGS*SVRILVEMVQI Trigger: TATCTGTACCATCTCAACCAGGATGCGTACACTGCAACTGCCATTAACGGGACAGACTTTTGTACATCCGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS CAA 72 bp | GTCCCGTTAATGGCAGTTGCAGTGTACGCATCCTGGTaGAGATGGTACAGATATTTAAGGAGACACCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: VPLMAVAVYASW*RWYRYLRRHQS Trigger: GCTTTGGTGTCTCCTTAAATATCTGTACCATCTCAACCAGGATGCGTACACTGCAACTGCCATTAACGGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS CCA 72 bp | AGGAAAGGACAGCTGCTGATGGCTTTGTTTGTGACGTaGAGAAGCTCAACTGTCAATTTTATCCTCTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: RKGQLLMALFVT*RSSTVNFILFL Trigger: CAGGAAGAGGATAAAATTGACAGTTGAGCTTCTCCACGTCACAAACAAAGCCATCAGCAGCTGTCCTTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS CCA 72 bp | ATGGTAGCAGAAAAGTACGAAGAGAGACGAAAGGATTaGACGGGCAGGAGGGTCATTTTGATTCCTGTTGAA | + |
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Preference number: 6 (lower is better) Translates to: MVAEKYEERRKD*TGRRVILIPVE Trigger: TTCAACAGGAATCAAAATGACCCTCCTGCCCGTCCAATCCTTTCGTCTCTCTTCGTACTTTTCTGCTACCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS CCA 72 bp | TTAATGGCAGTTGCAGTGTACGCATCCTGGTTGAGATaGTACAGATATTTAAGGAGACACCAAAGCCCACAG | + |
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Preference number: 6 (lower is better) Translates to: LMAVAVYASWLR*YRYLRRHQSPQ Trigger: CTGTGGGCTTTGGTGTCTCCTTAAATATCTGTACCATCTCAACCAGGATGCGTACACTGCAACTGCCATTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS CCA 72 bp | TCTGTCCCGTTAATGGCAGTTGCAGTGTACGCATCCTaGTTGAGATGGTACAGATATTTAAGGAGACACCAA | + |
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Preference number: 6 (lower is better) Translates to: SVPLMAVAVYAS*LRWYRYLRRHQ Trigger: TTGGTGTCTCCTTAAATATCTGTACCATCTCAACCAGGATGCGTACACTGCAACTGCCATTAACGGGACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS CAA 72 bp | ATCTCACAATGGGCTGGAGTTCTGTCCCCTCTTCATTaGGTAAAGCATCCTTTTGTCCTTGAGACTTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: ISQWAGVLSPLH*VKHPFVLETWH Trigger: ATGCCAAGTCTCAAGGACAAAAGGATGCTTTACCAAATGAAGAGGGGACAGAACTCCAGCCCATTGTGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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| CDS CCA 72 bp | CAAGTTGTTGGTCCGTTTTATAACACTCAAAAACCCTaGGTCCATAAAGTACGGTTTCTCCGACGATCCATC | + |
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Preference number: 6 (lower is better) Translates to: QVVGPFYNTQKP*VHKVRFLRRSI Trigger: GATGGATCGTCGGAGAAACCGTACTTTATGGACCCAGGGTTTTTGAGTGTTATAAAACGGACCAACAACTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039197.9 |
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