Pregenerated sensors for SLC44A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028412Ensembl transcript IDs: ENSMUST00000102911.10, ENSMUST00000107645.2, ENSMUST00000107646.9, ENSMUST00000107647.8, ENSMUST00000107651.9
Found 309 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATGGAACAGGGGCAGCAAGAGTCCATGATGCAGGGATGTCCAAGTaGGCAGAACCTGATTCCCAAGTGCAAGTCCATCATCACGTCACT | + |
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Preference number: 1 (lower is better) Translates to: HGTGAARVHDAGMSK*AEPDSQVQVHHHVT Trigger: AGTGACGTGATGATGGACTTGCACTTGGGAATCAGGTTCTGCTCACTTGGACATCCCTGCATCATGGACTCTTGCTGCCCCTGTTCCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
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| 3UTR TCA 90 bp | AGGAGTGGGGCACCTGCCCGTGTGTTCAGATTTATAGCAAGCATTTaGATAGATGGTCGTTTAACCCTAAGCTCCCGACTTGCCTTGGAA | + |
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Preference number: 1 (lower is better) Translates to: RSGAPARVFRFIASI*IDGRLTLSSRLALE Trigger: TTCCAAGGCAAGTCGGGAGCTTAGGGTTAAACGACCATCTATTCAAATGCTTGCTATAAATCTGAACACACGGGCAGGTGCCCCACTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
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| 3UTR GCA 90 bp | TACCTAAGCTGGAAATCAATACCCAGAAAGGCTAAACTTGCTGGGTaGCCCAGCTTCCTTTCAGATCAGGCACACGAATGTGTGGTGGAT | + |
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Preference number: 1 (lower is better) Translates to: YLSWKSIPRKAKLAG*PSFLSDQAHECVVD Trigger: ATCCACCACACATTCGTGTGCCTGATCTGAAAGGAAGCTGGGGCACCCAGCAAGTTTAGCCTTTCTGGGTATTGATTTCCAGCTTAGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
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| 3UTR CCA 90 bp | AGTGCAAGTCCATCATCACGTCACTTTGAAGGGACATCTCCTAAATaGCTAGCTCCTGGAATGTCTTCTGGTGTGAGACCCATCTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: SASPSSRHFEGTSPK*LAPGMSSGVRPIFQ Trigger: CTGGAAGATGGGTCTCACACCAGAAGACATTCCAGGAGCTAGCCATTTAGGAGATGTCCCTTCAAAGTGACGTGATGATGGACTTGCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
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| 3UTR TCA 90 bp | AGAGAATCCCCTGTGAGTTCTGACTTTGGGCTGATGCTCACTAGCTaGGAAGCAGGGCTTGACTCAAACATTACAAGGCCAGAAGAGAAA | + |
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Preference number: 1 (lower is better) Translates to: RESPVSSDFGLMLTS*EAGLDSNITRPEEK Trigger: TTTCTCTTCTGGCCTTGTAATGTTTGAGTCAAGCCCTGCTTCTCAGCTAGTGAGCATCAGCCCAAAGTCAGAACTCACAGGGGATTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
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| 3UTR GCA 90 bp | AGCAAGCATTTGAATAGATGGTCGTTTAACCCTAAGCTCCCGACTTaGCTTGGAAACAGAAGCAGAGCGCTGAAACTCTCAGCTTCATGC | + |
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Preference number: 1 (lower is better) Translates to: SKHLNRWSFNPKLPT*LGNRSRALKLSASC Trigger: GCATGAAGCTGAGAGTTTCAGCGCTCTGCTTCTGTTTCCAAGGCAAGTCGGGAGCTTAGGGTTAAACGACCATCTATTCAAATGCTTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
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| 3UTR CCA 90 bp | GGCACCTGCCCGTGTGTTCAGATTTATAGCAAGCATTTGAATAGATaGTCGTTTAACCCTAAGCTCCCGACTTGCCTTGGAAACAGAAGC | + |
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Preference number: 1 (lower is better) Translates to: GTCPCVQIYSKHLNR*SFNPKLPTCLGNRS Trigger: GCTTCTGTTTCCAAGGCAAGTCGGGAGCTTAGGGTTAAACGACCATCTATTCAAATGCTTGCTATAAATCTGAACACACGGGCAGGTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
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| 3UTR TCA 90 bp | ATTGAAGTAATAAGATCCTGTCTTCCGCACAGACTCAACAGCTGGTaGGTGGAGAGCCTTGTGCAAACAGCCTCCTTAGAGTCCATTCTT | + |
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Preference number: 1 (lower is better) Translates to: IEVIRSCLPHRLNSW*VESLVQTASLESIL Trigger: AAGAATGGACTCTAAGGAGGCTGTTTGCACAAGGCTCTCCACTCACCAGCTGTTGAGTCTGTGCGGAAGACAGGATCTTATTACTTCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
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| 3UTR TCA 90 bp | TTTGGCTGTTCAAGGTTGGAGAACTTTCTTGATCGCTGCTGCCATTaGAGTAATAAGATCCTGTCTTCCGCACAGACTCAACAGCTGGTG | + |
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Preference number: 1 (lower is better) Translates to: FGCSRLENFLDRCCH*SNKILSSAQTQQLV Trigger: CACCAGCTGTTGAGTCTGTGCGGAAGACAGGATCTTATTACTTCAATGGCAGCAGCGATCAAGAAAGTTCTCCAACCTTGAACAGCCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
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| 3UTR GCA 90 bp | CATTGTAGAACTCCGGATACAACGAATACCAAGGAGTGGGGCACCTaGCCGTGTGTTCAGATTTATAGCAAGCATTTGAATAGATGGTCG | + |
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Preference number: 1 (lower is better) Translates to: HCRTPDTTNTKEWGT*PCVQIYSKHLNRWS Trigger: CGACCATCTATTCAAATGCTTGCTATAAATCTGAACACACGGGCAGGTGCCCCACTCCTTGGTATTCGTTGTATCCGGAGTTCTACAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
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| 3UTR TCA 90 bp | TTAACCCTAAGCTCCCGACTTGCCTTGGAAACAGAAGCAGAGCGCTaGAACTCTCAGCTTCATGCTTCTTGTTTCTCTCTCTTTAATTCT | + |
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Preference number: 1 (lower is better) Translates to: LTLSSRLALETEAER*NSQLHASCFSLFNS Trigger: AGAATTAAAGAGAGAGAAACAAGAAGCATGAAGCTGAGAGTTTCAGCGCTCTGCTTCTGTTTCCAAGGCAAGTCGGGAGCTTAGGGTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
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| 3UTR CCA 90 bp | TCAGTTACACATTGTAGAACTCCGGATACAACGAATACCAAGGAGTaGGGCACCTGCCCGTGTGTTCAGATTTATAGCAAGCATTTGAAT | + |
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Preference number: 1 (lower is better) Translates to: SVTHCRTPDTTNTKE*GTCPCVQIYSKHLN Trigger: ATTCAAATGCTTGCTATAAATCTGAACACACGGGCAGGTGCCCCACTCCTTGGTATTCGTTGTATCCGGAGTTCTACAATGTGTAACTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
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| 3UTR CCA 90 bp | GAAATTTCCCGTAACGGGCCCACTCAGATGCTTCTCAAAGTAAAATaGCATGGCTTCTTTGATTGGAGAAAACAGACTGGAGAAATCTCT | + |
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Preference number: 1 (lower is better) Translates to: EISRNGPTQMLLKVK*HGFFDWRKQTGEIS Trigger: AGAGATTTCTCCAGTCTGTTTTCTCCAATCAAAGAAGCCATGCCATTTTACTTTGAGAAGCATCTGAGTGGGCCCGTTACGGGAAATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
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| 3UTR CCA 90 bp | TTTCTGGTGAATCATTATTTCACAATAGCTATACTCTCTCAATGCTaGCTTCCCAGATCCTGCTTACACATGCACTCTTGTGTGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: FLVNHYFTIAILSQC*LPRSCLHMHSCVCV Trigger: CACACACACACAAGAGTGCATGTGTAAGCAGGATCTGGGAAGCCAGCATTGAGAGAGTATAGCTATTGTGAAATAATGATTCACCAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
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| 3UTR TCA 90 bp | GAATCTAACATTTCCATTAAGACAATTACAATTGAAAACATTAAATaGCGGAAGTTGCCTTGTAAAAGCCACCCGTATGAAAGGCGTACA | + |
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Preference number: 1 (lower is better) Translates to: ESNISIKTITIENIK*RKLPCKSHPYERRT Trigger: TGTACGCCTTTCATACGGGTGGCTTTTACAAGGCAACTTCCGTCATTTAATGTTTTCAATTGTAATTGTCTTAATGGAAATGTTAGATTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
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| 3UTR-3UTR TCA 90 bp | CACCCTCCCCAAGACGCTTCCCATGCATATACACCGCCATACCCAGCCCAATTTATCGACTGTGTGATCTaGCTCACAACACATGATCTC | + |
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Preference number: 2 (lower is better) Translates to: HPPQDASHAYTPPYPAQFIDCVI*LTTHDL Trigger: GAGATCATGTGTTGTGAGTCAGATCACACAGTCGAT...AAATTGGGCTGGGTATGGCGGTGTATATGCATGGGAAGCGTCTTGGGGAGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
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| 3UTR-3UTR CCA 90 bp | GAAAGGCTAAACTTGCTGGGTGCCCCAGCTTCCTTTCAGATCAGGCACACGAATGTTTTGGAATGTCAATaGGGGTCCATAACCGTCGGC | + |
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Preference number: 2 (lower is better) Translates to: ERLNLLGAPASFQIRHTNVLECQ*GSITVG Trigger: GCCGACGGTTATGGACCCCCATTGACATTCCAAAAC...ATTCGTGTGCCTGATCTGAAAGGAAGCTGGGGCACCCAGCAAGTTTAGCCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
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| 3UTR-3UTR TCA 90 bp | GATTCTTTTGTGCTTCTACCACCCTCCCCAAGACGCTTCCCATGCATATACACCCTGAGAAGCAGGGCTTaGCTCAAACATTACAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: DSFVLLPPSPRRFPCIYTLRSRA*LKHYKA Trigger: GGCCTTGTAATGTTTGAGTCAAGCCCTGCTTCTCAG...GGTGTATATGCATGGGAAGCGTCTTGGGGAGGGTGGTAGAAGCACAAAAGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
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| 3UTR-3UTR GCA 90 bp | TTGCTGGGTGCCCCAGCTTCCTTTCAGATCAGGCACACGAATGTGTGGTGGATGTTAAATGACGGAAGTTaGCTTGTAAAAGCCACCCGT | + |
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Preference number: 2 (lower is better) Translates to: LLGAPASFQIRHTNVWWMLNDGS*LVKATR Trigger: ACGGGTGGCTTTTACAAGGCAACTTCCGTCATTTAA...CATCCACCACACATTCGTGTGCCTGATCTGAAAGGAAGCTGGGGCACCCAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
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| 3UTR-3UTR GCA 90 bp | GTGATTCTTTTGTGCTTCTACCACCCTCCCCAAGACGCTTCCCATGCATATACACAGACCCGGGATGAATaGAGAGAATCCCCTGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: VILLCFYHPPQDASHAYTQTRDE*RESPVS Trigger: ACTCACAGGGGATTCTCTGCATTCATCCCGGGTCTG...TGTATATGCATGGGAAGCGTCTTGGGGAGGGTGGTAGAAGCACAAAAGAATCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
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| 3UTR-3UTR CCA 90 bp | TCCCATGCATATACACCGCCATACCCAGCCCAATTTGAGACTGGGAGTGATATCTCAACAGCTGGTGAGTaGAGAGCCTTGTGCAAACAG | + |
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Preference number: 2 (lower is better) Translates to: SHAYTPPYPAQFETGSDISTAGE*RALCKQ Trigger: CTGTTTGCACAAGGCTCTCCACTCACCAGCTGTTGA...GATATCACTCCCAGTCTCAAATTGGGCTGGGTATGGCGGTGTATATGCATGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
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| 3UTR-3UTR TCA 90 bp | TGGGTGCCCCAGCTTCCTTTCAGATCAGGCACACGAATGTGTGGTGGATGCTACAATCTCTTATTTATCTaGACGCACATGCCTAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: WVPQLPFRSGTRMCGGCYNLLFI*THMPSL Trigger: CAGACTAGGCATGTGCGTTCAGATAAATAAGAGATT...GTAGCATCCACCACACATTCGTGTGCCTGATCTGAAAGGAAGCTGGGGCACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
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| 3UTR-3UTR CCA 90 bp | TGGGTGCCCCAGCTTCCTTTCAGATCAGGCACACGAATGTGTGGTGGATGCTACCATGGCTTCTTTGATTaGAGAAAACAGACTGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: WVPQLPFRSGTRMCGGCYHGFFD*RKQTGE Trigger: TTCTCCAGTCTGTTTTCTCCAATCAAAGAAGCCATG...GTAGCATCCACCACACATTCGTGTGCCTGATCTGAAAGGAAGCTGGGGCACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
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| 3UTR-3UTR TCA 90 bp | AGAAATCCCAAACGTACCCCCAAACATAAAGCACACTCACACTCGAGGGTTAACCGCACATGCCTAGTCTaGCACACTAGGACTTATGCA | + |
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Preference number: 2 (lower is better) Translates to: RNPKRTPKHKAHSHSRVNRTCLV*HTRTYA Trigger: TGCATAAGTCCTAGTGTGTCAGACTAGGCATGTGCG...GTTAACCCTCGAGTGTGAGTGTGCTTTATGTTTGGGGGTACGTTTGGGATTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
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| 3UTR-3UTR GCA 90 bp | AGAAATCCCAAACGTACCCCCAAACATAAAGCACACTCACACTCGAGGGTTAACGCTAAACTTGCTGGGTaGCCCAGCTTCCTTTCAGAT | + |
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Preference number: 2 (lower is better) Translates to: RNPKRTPKHKAHSHSRVNAKLAG*PSFLSD Trigger: ATCTGAAAGGAAGCTGGGGCACCCAGCAAGTTTAGC...GTTAACCCTCGAGTGTGAGTGTGCTTTATGTTTGGGGGTACGTTTGGGATTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
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| 3UTR-3UTR CCA 90 bp | TTGCTGGGTGCCCCAGCTTCCTTTCAGATCAGGCACACGAATGTGTGGTGGATGGTGTATATATTGTTTTaGAATGTCAATGGGGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: LLGAPASFQIRHTNVWWMVYILF*NVNGGP Trigger: TGGACCCCCATTGACATTCCAAAACAATATATACAC...CATCCACCACACATTCGTGTGCCTGATCTGAAAGGAAGCTGGGGCACCCAGCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
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| 3UTR-3UTR TCA 90 bp | ATTCTTTTGTGCTTCTACCACCCTCCCCAAGACGCTTCCCATGCATATACACCGCTTGACAAGGCTTCTTaGGGATTCAGTATTATGTCG | + |
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Preference number: 2 (lower is better) Translates to: ILLCFYHPPQDASHAYTPLDKAS*GFSIMS Trigger: CGACATAATACTGAATCCTCAAGAAGCCTTGTCAAG...CGGTGTATATGCATGGGAAGCGTCTTGGGGAGGGTGGTAGAAGCACAAAAGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
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| 3UTR-3UTR CCA 90 bp | TCATTATTTCACAATAGCTATACTCTCTCAATGCTGGCTTCCCAGATCCTGCTTGCTCCCGACTTGCCTTaGAAACAGAAGCAGAGCGCT | + |
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Preference number: 2 (lower is better) Translates to: SLFHNSYTLSMLASQILLAPDLP*KQKQSA Trigger: AGCGCTCTGCTTCTGTTTCCAAGGCAAGTCGGGAGC...AAGCAGGATCTGGGAAGCCAGCATTGAGAGAGTATAGCTATTGTGAAATAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
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| 3UTR-3UTR TCA 90 bp | AGAAATCCCAAACGTACCCCCAAACATAAAGCACACTCACACTCGAGGGTTAACGGAGTTGGTTACTTTTaGATGTCGGCTGACAAATGC | + |
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Preference number: 2 (lower is better) Translates to: RNPKRTPKHKAHSHSRVNGVGYF*MSADKC Trigger: GCATTTGTCAGCCGACATTCAAAAGTAACCAACTCC...GTTAACCCTCGAGTGTGAGTGTGCTTTATGTTTGGGGGTACGTTTGGGATTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
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| 3UTR-3UTR CCA 90 bp | CAGGGATGTCCAAGTGAGCAGAACCTGATTCCCAAGTGCAAGTCCATCATCACGCTTCTCAAAGTAAAATaGCATGGCTTCTTTGATTGG | + |
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Preference number: 2 (lower is better) Translates to: QGCPSEQNLIPKCKSIITLLKVK*HGFFDW Trigger: CCAATCAAAGAAGCCATGCCATTTTACTTTGAGAAG...CGTGATGATGGACTTGCACTTGGGAATCAGGTTCTGCTCACTTGGACATCCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
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| 3UTR CAA 90 bp | GCATCTCCTTTCCTCATCGTCAAAACGTCAATGATACCTACAAACTaGACAAGGCTTCTTGAGGATTCAGTATTATGTCGGGCACCCATC | + |
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Preference number: 2 (lower is better) Translates to: ASPFLIVKTSMIPTN*TRLLEDSVLCRAPI Trigger: GATGGGTGCCCGACATAATACTGAATCCTCAAGAAGCCTTGTCAAGTTTGTAGGTATCATTGACGTTTTGACGATGAGGAAAGGAGATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
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| 3UTR CAA 90 bp | TCCCAGATCCTGCTTACACATGCACTCTTGTGTGTGTGTGTGTGTTaGTGTGTGTGGTTTGCTGTTGTTTTTAATCCAGACTCTTATTGC | + |
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Preference number: 2 (lower is better) Translates to: SQILLTHALLCVCVC*CVWFAVVFNPDSYC Trigger: GCAATAAGAGTCTGGATTAAAAACAACAGCAAACCACACACACAAACACACACACACACACAAGAGTGCATGTGTAAGCAGGATCTGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
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| 3UTR-3UTR TCA 90 bp | ATGTCTTCTGGTGTGAGACCCATCTTCCAGGCTCTGGCCCATTCTCAATTTAGTTTCTCTGATTTTGGCTaGTTATGTGTGTGTGTGTAT | + |
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Preference number: 2 (lower is better) Translates to: MSSGVRPIFQALAHSQFSFSDFG*LCVCVY Trigger: ATACACACACACACATAATCAGCCAAAATCAGAGAA...ACTAAATTGAGAATGGGCCAGAGCCTGGAAGATGGGTCTCACACCAGAAGACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
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| 3UTR CAA 90 bp | ATGCACTCTTGTGTGTGTGTGTGTGTTTGTGTGTGTGGTTTGCTGTaGTTTTTAATCCAGACTCTTATTGCAAAAACTCTGAAGGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: MHSCVCVCVCVCGLL*FLIQTLIAKTLKAQ Trigger: CTGAGCCTTCAGAGTTTTTGCAATAAGAGTCTGGATTAAAAACAACAGCAAACCACACACACAAACACACACACACACACAAGAGTGCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
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| 3UTR-3UTR GCA 90 bp | TCATTATTTCACAATAGCTATACTCTCTCAATGCTGGCTTCCCAGATCCTGCTTCCTCAGAACATTGTATaGAATCCCATAACACCAGTC | + |
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Preference number: 2 (lower is better) Translates to: SLFHNSYTLSMLASQILLPQNIV*NPITPV Trigger: GACTGGTGTTATGGGATTGCATACAATGTTCTGAGG...AAGCAGGATCTGGGAAGCCAGCATTGAGAGAGTATAGCTATTGTGAAATAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
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| 3UTR-3UTR TCA 90 bp | AATCCAGACTCTTATTGCAAAAACTCTGAAGGCTCAGAAATATTCATGAGCTTTATGGCATGGCTTCTTTaGTTGGAGAAAACAGACTGG | + |
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Preference number: 2 (lower is better) Translates to: NPDSYCKNSEGSEIFMSFMAWLL*LEKTDW Trigger: CCAGTCTGTTTTCTCCAATCAAAGAAGCCATGCCAT...AAAGCTCATGAATATTTCTGAGCCTTCAGAGTTTTTGCAATAAGAGTCTGGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
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| 3UTR-3UTR CCA 90 bp | ATATCCATTGGGATACTACAGGGCAGTTATCTCTGTAGCAATAATAAGCAAAGCTGTAGTCAATCCATTTaGCTGTTCAAGGTTGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: ISIGILQGSYLCSNNKQSCSQSI*LFKVGE Trigger: TTCTCCAACCTTGAACAGCCAAATGGATTGACTACA...GCTTTGCTTATTATTGCTACAGAGATAACTGCCCTGTAGTATCCCAATGGATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
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| 3UTR CCA 72 bp | ATGCAGCAGGCCCCTGGTACTAGTTATCAGCCCACATaGACCCTGTATGTAGCAGAGTCAGAGAGGACAGAC | + |
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Preference number: 3 (lower is better) Translates to: MQQAPGTSYQPT*TLYVAESERTD Trigger: GTCTGTCCTCTCTGACTCTGCTACATACAGGGTCCATGTGGGCTGATAACTAGTACCAGGGGCCTGCTGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
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| 3UTR TCA 72 bp | GGGGCAGCAAGAGTCCATGATGCAGGGATGTCCAAGTaGGCAGAACCTGATTCCCAAGTGCAAGTCCATCAT | + |
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Preference number: 3 (lower is better) Translates to: GAARVHDAGMSK*AEPDSQVQVHH Trigger: ATGATGGACTTGCACTTGGGAATCAGGTTCTGCTCACTTGGACATCCCTGCATCATGGACTCTTGCTGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
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| 3UTR TCA 72 bp | ATAAGATCCTGTCTTCCGCACAGACTCAACAGCTGGTaGGTGGAGAGCCTTGTGCAAACAGCCTCCTTAGAG | + |
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Preference number: 3 (lower is better) Translates to: IRSCLPHRLNSW*VESLVQTASLE Trigger: CTCTAAGGAGGCTGTTTGCACAAGGCTCTCCACTCACCAGCTGTTGAGTCTGTGCGGAAGACAGGATCTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
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| 3UTR TCA 72 bp | AGCTCCCGACTTGCCTTGGAAACAGAAGCAGAGCGCTaGAACTCTCAGCTTCATGCTTCTTGTTTCTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: SSRLALETEAER*NSQLHASCFSL Trigger: GAGAGAGAAACAAGAAGCATGAAGCTGAGAGTTTCAGCGCTCTGCTTCTGTTTCCAAGGCAAGTCGGGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
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| 3UTR TCA 72 bp | CCTGTGAGTTCTGACTTTGGGCTGATGCTCACTAGCTaGGAAGCAGGGCTTGACTCAAACATTACAAGGCCA | + |
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Preference number: 3 (lower is better) Translates to: PVSSDFGLMLTS*EAGLDSNITRP Trigger: TGGCCTTGTAATGTTTGAGTCAAGCCCTGCTTCTCAGCTAGTGAGCATCAGCCCAAAGTCAGAACTCACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
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| 3UTR CCA 72 bp | CCATCATCACGTCACTTTGAAGGGACATCTCCTAAATaGCTAGCTCCTGGAATGTCTTCTGGTGTGAGACCC | + |
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Preference number: 3 (lower is better) Translates to: PSSRHFEGTSPK*LAPGMSSGVRP Trigger: GGGTCTCACACCAGAAGACATTCCAGGAGCTAGCCATTTAGGAGATGTCCCTTCAAAGTGACGTGATGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
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| 3UTR GCA 72 bp | TGGAAATCAATACCCAGAAAGGCTAAACTTGCTGGGTaGCCCAGCTTCCTTTCAGATCAGGCACACGAATGT | + |
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Preference number: 3 (lower is better) Translates to: WKSIPRKAKLAG*PSFLSDQAHEC Trigger: ACATTCGTGTGCCTGATCTGAAAGGAAGCTGGGGCACCCAGCAAGTTTAGCCTTTCTGGGTATTGATTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
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| 3UTR GCA 72 bp | TCTCTCAATGCTGGCTTCCCAGATCCTGCTTACACATaGACTCTTGTGTGTGTGTGTGTGTTTGTGTGTGTG | + |
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Preference number: 3 (lower is better) Translates to: SLNAGFPDPAYT*TLVCVCVFVCV Trigger: CACACACACAAACACACACACACACACAAGAGTGCATGTGTAAGCAGGATCTGGGAAGCCAGCATTGAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
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| 3UTR-3UTR CAA 90 bp | CCCAAACGTACCCCCAAACATAAAGCACACTCACACTCGAGGGTTAACACCAACCAAATACCTGAGGAGTaGGTTACTTTTGAATGTCGG | + |
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Preference number: 3 (lower is better) Translates to: PKRTPKHKAHSHSRVNTNQIPEE*VTFECR Trigger: CCGACATTCAAAAGTAACCAACTCCTCAGGTATTTG...GTTGGTGTTAACCCTCGAGTGTGAGTGTGCTTTATGTTTGGGGGTACGTTTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
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| 3UTR-3UTR CAA 90 bp | CAGGGATGTCCAAGTGAGCAGAACCTGATTCCCAAGTGCAAGTCCATCATCACGACCCCTTTCTCTCTATaGTTCCTACTTCCTTCTATA | + |
|
Preference number: 3 (lower is better) Translates to: QGCPSEQNLIPKCKSIITTPFSL*FLLPSI Trigger: TATAGAAGGAAGTAGGAACAATAGAGAGAAAGGGGT...CGTGATGATGGACTTGCACTTGGGAATCAGGTTCTGCTCACTTGGACATCCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| 3UTR GCA 72 bp | TTGAATAGATGGTCGTTTAACCCTAAGCTCCCGACTTaGCTTGGAAACAGAAGCAGAGCGCTGAAACTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LNRWSFNPKLPT*LGNRSRALKLS Trigger: TGAGAGTTTCAGCGCTCTGCTTCTGTTTCCAAGGCAAGTCGGGAGCTTAGGGTTAAACGACCATCTATTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| 3UTR GCA 72 bp | ACTCCGGATACAACGAATACCAAGGAGTGGGGCACCTaGCCGTGTGTTCAGATTTATAGCAAGCATTTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: TPDTTNTKEWGT*PCVQIYSKHLN Trigger: ATTCAAATGCTTGCTATAAATCTGAACACACGGGCAGGTGCCCCACTCCTTGGTATTCGTTGTATCCGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| 3UTR-3UTR CAA 90 bp | CCCAAACGTACCCCCAAACATAAAGCACACTCACACTCGAGGGTTAACACCAACTGTGTATATATTGTTTaGGAATGTCAATGGGGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: PKRTPKHKAHSHSRVNTNCVYIV*ECQWGS Trigger: GGACCCCCATTGACATTCCAAAACAATATATACACA...GTTGGTGTTAACCCTCGAGTGTGAGTGTGCTTTATGTTTGGGGGTACGTTTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| 3UTR-3UTR CAA 90 bp | AGAAATCCCAAACGTACCCCCAAACATAAAGCACACTCACACTCGAGGGTTAACAATGGCATGGCTTCTTaGATTGGAGAAAACAGACTG | + |
|
Preference number: 3 (lower is better) Translates to: RNPKRTPKHKAHSHSRVNNGMAS*IGENRL Trigger: CAGTCTGTTTTCTCCAATCAAAGAAGCCATGCCATT...GTTAACCCTCGAGTGTGAGTGTGCTTTATGTTTGGGGGTACGTTTGGGATTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| 3UTR GCA 72 bp | GTGAATCATTATTTCACAATAGCTATACTCTCTCAATaGTGGCTTCCCAGATCCTGCTTACACATGCACTCT | + |
|
Preference number: 3 (lower is better) Translates to: VNHYFTIAILSQ*WLPRSCLHMHS Trigger: AGAGTGCATGTGTAAGCAGGATCTGGGAAGCCAGCATTGAGAGAGTATAGCTATTGTGAAATAATGATTCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| 3UTR-3UTR CAA 90 bp | TCATTATTTCACAATAGCTATACTCTCTCAATGCTGGCTTCCCAGATCCTGCTTGTGTGTGGTTTGCTGTaGTTTTTAATCCAGACTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SLFHNSYTLSMLASQILLVCGLL*FLIQTL Trigger: AAGAGTCTGGATTAAAAACAACAGCAAACCACACAC...AAGCAGGATCTGGGAAGCCAGCATTGAGAGAGTATAGCTATTGTGAAATAATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| 3UTR TCA 72 bp | TCGAAAATCTGTGTGGCTACAAGTTACATGGTATACTaGCTTTCTCACATAATCTTCCTCTCTCACCTAGTA | + |
|
Preference number: 3 (lower is better) Translates to: SKICVATSYMVY*LSHIIFLSHLV Trigger: TACTAGGTGAGAGAGGAAGATTATGTGAGAAAGTCAGTATACCATGTAACTTGTAGCCACACAGATTTTCGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR TCA 90 bp | CTGTCTTCCGCACAGACTCAACAGCTGGTGAGTGGAGAGCCTTGTGCAAACAGCGGAACAAGGCGATGGTaGGAGCCACACGCTTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSSAQTQQLVSGEPCANSGTRRW*EPHACA Trigger: TGCGCAAGCGTGTGGCTCTCACCATCGCCTTGTTCC...GCTGTTTGCACAAGGCTCTCCACTCACCAGCTGTTGAGTCTGTGCGGAAGACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR TCA 90 bp | TGGGTGCCCCAGCTTCCTTTCAGATCAGGCACACGAATGTGTGGTGGATGCTACAGTCCCCCACTGTGTTaGTGGCAGCCACTCGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WVPQLPFRSGTRMCGGCYSPPLC*WQPLAE Trigger: CTCTGCGAGTGGCTGCCATCAACACAGTGGGGGACT...GTAGCATCCACCACACATTCGTGTGCCTGATCTGAAAGGAAGCTGGGGCACCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR CCA 90 bp | TCTTCCGCACAGACTCAACAGCTGGTGAGTGGAGAGCCTTGTGCAAACAGCCTCGCTTCCATTCTCGTTTaGAGCTCTGCGCGGCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSAQTQQLVSGEPCANSLASILV*SSARRR Trigger: CCTCCGCCGCGCAGAGCTCCAAACGAGAATGGAAGC...GAGGCTGTTTGCACAAGGCTCTCCACTCACCAGCTGTTGAGTCTGTGCGGAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
||
| CDS-3UTR GCA 90 bp | TCCCAATCACAACTGCCTGCTTTCGATGTCACAGTGTCCTTTAGGTCACACTCTTCTCGTTTGGAGCTCTaGGCGGCGGAGGCGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQSQLPAFDVTVSFRSHSSRLEL*AAEAEL Trigger: CAGCTCCGCCTCCGCCGCGCAGAGCTCCAAACGAGA...AGAGTGTGACCTAAAGGACACTGTGACATCGAAAGCAGGCAGTTGTGATTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR TCA 90 bp | CCCAATCACAACTGCCTGCTTTCGATGTCACAGTGTCCTTTAGGTCACACTCTGGGAACAAGGCGATGGTaGGAGCCACACGCTTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: PNHNCLLSMSQCPLGHTLGTRRW*EPHACA Trigger: TGCGCAAGCGTGTGGCTCTCACCATCGCCTTGTTCC...CAGAGTGTGACCTAAAGGACACTGTGACATCGAAAGCAGGCAGTTGTGATTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR TCA 90 bp | TCTTCCGCACAGACTCAACAGCTGGTGAGTGGAGAGCCTTGTGCAAACAGCCTCACAGAGGCAAGTGTATaGAGACCTTGCCAGCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: SSAQTQQLVSGEPCANSLTEASV*RPCQPR Trigger: ACGTGGCTGGCAAGGTCTTCATACACTTGCCTCTGT...GAGGCTGTTTGCACAAGGCTCTCCACTCACCAGCTGTTGAGTCTGTGCGGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR TCA 90 bp | CTGGTGAGTGGAGAGCCTTGTGCAAACAGCCTCCTTAGAGTCCATTCTTCCAATAGTCCCCCACTGTGTTaGTGGCAGCCACTCGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LVSGEPCANSLLRVHSSNSPPLC*WQPLAE Trigger: CTCTGCGAGTGGCTGCCATCAACACAGTGGGGGACT...ATTGGAAGAATGGACTCTAAGGAGGCTGTTTGCACAAGGCTCTCCACTCACCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR GCA 90 bp | TTCTTGATCGCTGCTGCCATTGAAGTAATAAGATCCTGTCTTCCGCACAGACTCTCTCGTTTGGAGCTCTaGGCGGCGGAGGCGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLIAAAIEVIRSCLPHRLSRLEL*AAEAEL Trigger: CAGCTCCGCCTCCGCCGCGCAGAGCTCCAAACGAGA...GAGTCTGTGCGGAAGACAGGATCTTATTACTTCAATGGCAGCAGCGATCAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
||
| CDS-3UTR CCA 90 bp | ATCCTGTCTTCCGCACAGACTCAACAGCTGGTGAGTGGAGAGCCTTGTGCAAACACCTTGCCAGCCACGTaGAACAAGGCGATGGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ILSSAQTQQLVSGEPCANTLPAT*NKAMVR Trigger: TCTCACCATCGCCTTGTTCCACGTGGCTGGCAAGGT...GTTTGCACAAGGCTCTCCACTCACCAGCTGTTGAGTCTGTGCGGAAGACAGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR CCA 90 bp | TGGGTGCCCCAGCTTCCTTTCAGATCAGGCACACGAATGTGTGGTGGATGCTACATCAGGCCAACCACGTaGTACCACCACATGTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: WVPQLPFRSGTRMCGGCYIRPTT*YHHMYC Trigger: GCAGTACATGTGGTGGTACCACGTGGTTGGCCTGAT...GTAGCATCCACCACACATTCGTGTGCCTGATCTGAAAGGAAGCTGGGGCACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR CCA 90 bp | TTGCTGGGTGCCCCAGCTTCCTTTCAGATCAGGCACACGAATGTGTGGTGGATGAACACATACTTCCGGTaGGTGTGGTCCAGACCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LLGAPASFQIRHTNVWWMNTYFR*VWSRPL Trigger: CAGTGGTCTGGACCACACCCACCGGAAGTATGTGTT...CATCCACCACACATTCGTGTGCCTGATCTGAAAGGAAGCTGGGGCACCCAGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR TCA 90 bp | CTGTCTTCCGCACAGACTCAACAGCTGGTGAGTGGAGAGCCTTGTGCAAACAGCCGTTCTCCACTAGAATaGCGAAGGCATCCTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSSAQTQQLVSGEPCANSRSPLE*RRHPLL Trigger: CAGCAAAGGATGCCTTCGTCATTCTAGTGGAGAACG...GCTGTTTGCACAAGGCTCTCCACTCACCAGCTGTTGAGTCTGTGCGGAAGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR GCA 90 bp | TCTACCACCCTCCCCAAGACGCTTCCCATGCATATACACCGCCATACCCAGCCCAATGAAGGATCCTTTTaGCACAGTACCGAGGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: STTLPKTLPMHIHRHTQPNEGSF*HSTEVV Trigger: TACCACCTCGGTACTGTGGCAAAAGGATCCTTCATT...GGGCTGGGTATGGCGGTGTATATGCATGGGAAGCGTCTTGGGGAGGGTGGTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
||
| CDS-3UTR GCA 90 bp | GAAAGGCTAAACTTGCTGGGTGCCCCAGCTTCCTTTCAGATCAGGCACACGAATTCCCAGCCAAACCGGTaGTGCAGACTATCAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: ERLNLLGAPASFQIRHTNSQPNR*CRLSAP Trigger: AGGTGCTGATAGTCTGCAGCACCGGTTTGGCTGGGA...ATTCGTGTGCCTGATCTGAAAGGAAGCTGGGGCACCCAGCAAGTTTAGCCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR GCA 90 bp | TTGCTGGGTGCCCCAGCTTCCTTTCAGATCAGGCACACGAATGTGTGGTGGATGGCCATGGTATGTCTGTaGAGCTACGGTCTTCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: LLGAPASFQIRHTNVWWMAMVCL*SYGLPM Trigger: CATTGGAAGACCGTAGCTGCACAGACATACCATGGC...CATCCACCACACATTCGTGTGCCTGATCTGAAAGGAAGCTGGGGCACCCAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR GCA 90 bp | ATCCTGTCTTCCGCACAGACTCAACAGCTGGTGAGTGGAGAGCCTTGTGCAAACGGTGATCAGGGCCTCTaGAAACTTGGCATAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ILSSAQTQQLVSGEPCANGDQGL*KLGIAG Trigger: TCCTGCTATGCCAAGTTTGCAGAGGCCCTGATCACC...GTTTGCACAAGGCTCTCCACTCACCAGCTGTTGAGTCTGTGCGGAAGACAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
||
| CDS-3UTR CCA 90 bp | CAGAGTCAGAGAGGACAGACCCGGGATGAATGCAGAGAATCCCCTGTGAGTTCTAACACATACTTCCGGTaGGTGTGGTCCAGACCACTG | + |
|
Preference number: 4 (lower is better) Translates to: QSQRGQTRDECRESPVSSNTYFR*VWSRPL Trigger: CAGTGGTCTGGACCACACCCACCGGAAGTATGTGTT...AGAACTCACAGGGGATTCTCTGCATTCATCCCGGGTCTGTCCTCTCTGACTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
||
| CDS-3UTR TCA 90 bp | CAGGGATGTCCAAGTGAGCAGAACCTGATTCCCAAGTGCAAGTCCATCATCACGCTGAAATGGCATAGATaGGGAGCGCCCGCAGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: QGCPSEQNLIPKCKSIITLKWHR*GAPADC Trigger: ACAATCTGCGGGCGCTCCTCATCTATGCCATTTCAG...CGTGATGATGGACTTGCACTTGGGAATCAGGTTCTGCTCACTTGGACATCCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR GCA 90 bp | CTGTCTTCCGCACAGACTCAACAGCTGGTGAGTGGAGAGCCTTGTGCAAACAGCTACCACCACATGTACTaGAAAGGCCCGGAGATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSSAQTQQLVSGEPCANSYHHMY*KGPEIL Trigger: CAAAATCTCCGGGCCTTTGCAGTACATGTGGTGGTA...GCTGTTTGCACAAGGCTCTCCACTCACCAGCTGTTGAGTCTGTGCGGAAGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR GCA 90 bp | AGTAATAAGATCCTGTCTTCCGCACAGACTCAACAGCTGGTGAGTGGAGAGCCTCAGCCAAACCGGTGCTaGAGACTATCAGCACCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SNKILSSAQTQQLVSGEPQPNRC*RLSAPC Trigger: GCAAGGTGCTGATAGTCTGCAGCACCGGTTTGGCTG...AGGCTCTCCACTCACCAGCTGTTGAGTCTGTGCGGAAGACAGGATCTTATTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR GCA 90 bp | ATTCTTTTGTGCTTCTACCACCCTCCCCAAGACGCTTCCCATGCATATACACCGTCCCAGCCAAACCGGTaGTGCAGACTATCAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: ILLCFYHPPQDASHAYTPSQPNR*CRLSAP Trigger: AGGTGCTGATAGTCTGCAGCACCGGTTTGGCTGGGA...CGGTGTATATGCATGGGAAGCGTCTTGGGGAGGGTGGTAGAAGCACAAAAGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
||
| CDS-3UTR GCA 90 bp | GATTCTTCAGTTACACATTGTAGAACTCCGGATACAACGAATACCAAGGAGTGGTCTCGTTTGGAGCTCTaGGCGGCGGAGGCGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DSSVTHCRTPDTTNTKEWSRLEL*AAEAEL Trigger: CAGCTCCGCCTCCGCCGCGCAGAGCTCCAAACGAGA...CCACTCCTTGGTATTCGTTGTATCCGGAGTTCTACAATGTGTAACTGAAGAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR CCA 90 bp | TGGGTGCCCCAGCTTCCTTTCAGATCAGGCACACGAATGTGTGGTGGATGCTACAAAGAGAAGCAGCCATaGTATGTCTGTGCAGCTACG | + |
|
Preference number: 4 (lower is better) Translates to: WVPQLPFRSGTRMCGGCYKEKQP*YVCAAT Trigger: CGTAGCTGCACAGACATACCATGGCTGCTTCTCTTT...GTAGCATCCACCACACATTCGTGTGCCTGATCTGAAAGGAAGCTGGGGCACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR CCA 90 bp | TGGGTGCCCCAGCTTCCTTTCAGATCAGGCACACGAATGTGTGGTGGATGCTACACAGGAGCACAGCGATaGAAGAATGGAATAGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: WVPQLPFRSGTRMCGGCYTGAQR*KNGIGA Trigger: TGCACCTATTCCATTCTTCCATCGCTGTGCTCCTGT...GTAGCATCCACCACACATTCGTGTGCCTGATCTGAAAGGAAGCTGGGGCACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR TCA 90 bp | CTGGTGAGTGGAGAGCCTTGTGCAAACAGCCTCCTTAGAGTCCATTCTTCCAATCTGAAATGGCATAGATaGGGAGCGCCCGCAGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: LVSGEPCANSLLRVHSSNLKWHR*GAPADC Trigger: ACAATCTGCGGGCGCTCCTCATCTATGCCATTTCAG...ATTGGAAGAATGGACTCTAAGGAGGCTGTTTGCACAAGGCTCTCCACTCACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR TCA 90 bp | TTAATTAGCTGCCCCCACTGTAGTCAATCCATTTGGCTGTTCAAGGTTGGAGAAGGAACAAGGCGATGGTaGGAGCCACACGCTTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LISCPHCSQSIWLFKVGEGTRRW*EPHACA Trigger: TGCGCAAGCGTGTGGCTCTCACCATCGCCTTGTTCC...TTCTCCAACCTTGAACAGCCAAATGGATTGACTACAGTGGGGGCAGCTAATTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR TCA 90 bp | TTGCTGGGTGCCCCAGCTTCCTTTCAGATCAGGCACACGAATGTGTGGTGGATGCGTTTTCCTTCCCTTTaGGCTGACTGTGGATATACA | + |
|
Preference number: 4 (lower is better) Translates to: LLGAPASFQIRHTNVWWMRFPSL*ADCGYT Trigger: TGTATATCCACAGTCAGCTCAAAGGGAAGGAAAACG...CATCCACCACACATTCGTGTGCCTGATCTGAAAGGAAGCTGGGGCACCCAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR TCA 90 bp | GCTGCTGCCATTGAAGTAATAAGATCCTGTCTTCCGCACAGACTCAACAGCTGGGAAGGCATCCTTTGCTaGGGTGCAGAAGTTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AAAIEVIRSCLPHRLNSWEGILC*GAEVGA Trigger: AGCACCAACTTCTGCACCTCAGCAAAGGATGCCTTC...CCAGCTGTTGAGTCTGTGCGGAAGACAGGATCTTATTACTTCAATGGCAGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR TCA 90 bp | AGTAATAAGATCCTGTCTTCCGCACAGACTCAACAGCTGGTGAGTGGAGAGCCTCAAAGAGGCAGACGATaGTCAGAGGCAGCACCCATA | + |
|
Preference number: 4 (lower is better) Translates to: SNKILSSAQTQQLVSGEPQRGRR*SEAAPI Trigger: TATGGGTGCTGCCTCTGATCATCGTCTGCCTCTTTG...AGGCTCTCCACTCACCAGCTGTTGAGTCTGTGCGGAAGACAGGATCTTATTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR GCA 90 bp | CAGAGTCAGAGAGGACAGACCCGGGATGAATGCAGAGAATCCCCTGTGAGTTCTTACCACCACATGTACTaGAAAGGCCCGGAGATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QSQRGQTRDECRESPVSSYHHMY*KGPEIL Trigger: CAAAATCTCCGGGCCTTTGCAGTACATGTGGTGGTA...AGAACTCACAGGGGATTCTCTGCATTCATCCCGGGTCTGTCCTCTCTGACTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
||
| CDS-3UTR GCA 90 bp | CAGGGATGTCCAAGTGAGCAGAACCTGATTCCCAAGTGCAAGTCCATCATCACGTGTTACCACAGCTCCTaGCACAGTCATCTGCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: QGCPSEQNLIPKCKSIITCYHSS*HSHLLT Trigger: TGTCAGCAGATGACTGTGGCAGGAGCTGTGGTAACA...CGTGATGATGGACTTGCACTTGGGAATCAGGTTCTGCTCACTTGGACATCCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR GCA 90 bp | CTGTCTTCCGCACAGACTCAACAGCTGGTGAGTGGAGAGCCTTGTGCAAACAGCACCAAAGGCAGCAAATaGAGGATTTCAGCATGCATC | + |
|
Preference number: 4 (lower is better) Translates to: LSSAQTQQLVSGEPCANSTKGSK*RISACI Trigger: GATGCATGCTGAAATCCTGCATTTGCTGCCTTTGGT...GCTGTTTGCACAAGGCTCTCCACTCACCAGCTGTTGAGTCTGTGCGGAAGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR GCA 90 bp | TCTACCACCCTCCCCAAGACGCTTCCCATGCATATACACCGCCATACCCAGCCCACCACTGTTCGGTATTaGTTCCAGTTTTGCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: STTLPKTLPMHIHRHTQPTTVRY*FQFCIS Trigger: AGAAATGCAAAACTGGAAGCAATACCGAACAGTGGT...GGGCTGGGTATGGCGGTGTATATGCATGGGAAGCGTCTTGGGGAGGGTGGTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
||
| CDS-3UTR GCA 90 bp | CCCAATCACAACTGCCTGCTTTCGATGTCACAGTGTCCTTTAGGTCACACTCTGGGTGATCAGGGCCTCTaGAAACTTGGCATAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PNHNCLLSMSQCPLGHTLGDQGL*KLGIAG Trigger: TCCTGCTATGCCAAGTTTGCAGAGGCCCTGATCACC...CAGAGTGTGACCTAAAGGACACTGTGACATCGAAAGCAGGCAGTTGTGATTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR GCA 90 bp | CCCAATCACAACTGCCTGCTTTCGATGTCACAGTGTCCTTTAGGTCACACTCTGCTGAGATGCCCCAACTaGCCCTTGCATGCTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PNHNCLLSMSQCPLGHTLLRCPN*PLHASV Trigger: AACTGAAGCATGCAAGGGGCAGTTGGGGCATCTCAG...CAGAGTGTGACCTAAAGGACACTGTGACATCGAAAGCAGGCAGTTGTGATTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR CCA 90 bp | TTTTTCCTTTCTCAGAAAACAGGGAGACTGAAGATCCCAATCACAACTGCCTGCGCTTCCATTCTCGTTTaGAGCTCTGCGCGGCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FFLSQKTGRLKIPITTACASILV*SSARRR Trigger: CCTCCGCCGCGCAGAGCTCCAAACGAGAATGGAAGC...GCAGGCAGTTGTGATTGGGATCTTCAGTCTCCCTGTTTTCTGAGAAAGGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR TCA 90 bp | GCTGCCCCCACTGTAGTCAATCCATTTGGCTGTTCAAGGTTGGAGAACTTTCTTACAGAGGCAAGTGTATaGAGACCTTGCCAGCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: AAPTVVNPFGCSRLENFLTEASV*RPCQPR Trigger: ACGTGGCTGGCAAGGTCTTCATACACTTGCCTCTGT...AAGAAAGTTCTCCAACCTTGAACAGCCAAATGGATTGACTACAGTGGGGGCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR TCA 90 bp | TCCCAATCACAACTGCCTGCTTTCGATGTCACAGTGTCCTTTAGGTCACACTCTACAGAGGCAAGTGTATaGAGACCTTGCCAGCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: SQSQLPAFDVTVSFRSHSTEASV*RPCQPR Trigger: ACGTGGCTGGCAAGGTCTTCATACACTTGCCTCTGT...AGAGTGTGACCTAAAGGACACTGTGACATCGAAAGCAGGCAGTTGTGATTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR TCA 90 bp | CTGTCTTCCGCACAGACTCAACAGCTGGTGAGTGGAGAGCCTTGTGCAAACAGCAATAAGGCGATTCACTaGTGCCAGAATAGGTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSSAQTQQLVSGEPCANSNKAIH*CQNRCE Trigger: TTCACACCTATTCTGGCATCAGTGAATCGCCTTATT...GCTGTTTGCACAAGGCTCTCCACTCACCAGCTGTTGAGTCTGTGCGGAAGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR TCA 90 bp | ATGTCTTCTGGTGTGAGACCCATCTTCCAGGCTCTGGCCCATTCTCAATTTAGTGAAGGCATCCTTTGCTaGGGTGCAGAAGTTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: MSSGVRPIFQALAHSQFSEGILC*GAEVGA Trigger: AGCACCAACTTCTGCACCTCAGCAAAGGATGCCTTC...ACTAAATTGAGAATGGGCCAGAGCCTGGAAGATGGGTCTCACACCAGAAGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR TCA 90 bp | AGTAATAAGATCCTGTCTTCCGCACAGACTCAACAGCTGGTGAGTGGAGAGCCTCGTTCTCCACTAGAATaGCGAAGGCATCCTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SNKILSSAQTQQLVSGEPRSPLE*RRHPLL Trigger: CAGCAAAGGATGCCTTCGTCATTCTAGTGGAGAACG...AGGCTCTCCACTCACCAGCTGTTGAGTCTGTGCGGAAGACAGGATCTTATTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR TCA 90 bp | GAAGAGAAAGCAACAATGAAGTTTGAAGGCGTGGCTGCAAGGCAGATTATTATCAGTCCCCCACTGTGTTaGTGGCAGCCACTCGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EEKATMKFEGVAARQIIISPPLC*WQPLAE Trigger: CTCTGCGAGTGGCTGCCATCAACACAGTGGGGGACT...GATAATAATCTGCCTTGCAGCCACGCCTTCAAACTTCATTGTTGCTTTCTCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
||
| CDS-3UTR TCA 90 bp | TTGCTGGGTGCCCCAGCTTCCTTTCAGATCAGGCACACGAATGTGTGGTGGATGTGCACCTGTTGCTACTaGAAAGCCACAAATAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: LLGAPASFQIRHTNVWWMCTCCY*KATNKS Trigger: GGATTTATTTGTGGCTTTTCAGTAGCAACAGGTGCA...CATCCACCACACATTCGTGTGCCTGATCTGAAAGGAAGCTGGGGCACCCAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR GCA 90 bp | TCCCATGCATATACACCGCCATACCCAGCCCAATTTGAGACTGGGAGTGATATCTGTTACCACAGCTCCTaGCACAGTCATCTGCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: SHAYTPPYPAQFETGSDICYHSS*HSHLLT Trigger: TGTCAGCAGATGACTGTGGCAGGAGCTGTGGTAACA...GATATCACTCCCAGTCTCAAATTGGGCTGGGTATGGCGGTGTATATGCATGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
||
| CDS-3UTR GCA 90 bp | AGTGGAGAGCCTTGTGCAAACAGCCTCCTTAGAGTCCATTCTTCCAATCTGCAGTGTTACCACAGCTCCTaGCACAGTCATCTGCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: SGEPCANSLLRVHSSNLQCYHSS*HSHLLT Trigger: TGTCAGCAGATGACTGTGGCAGGAGCTGTGGTAACA...CTGCAGATTGGAAGAATGGACTCTAAGGAGGCTGTTTGCACAAGGCTCTCCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR GCA 90 bp | CCCAATCACAACTGCCTGCTTTCGATGTCACAGTGTCCTTTAGGTCACACTCTGTGTTACCACAGCTCCTaGCACAGTCATCTGCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: PNHNCLLSMSQCPLGHTLCYHSS*HSHLLT Trigger: TGTCAGCAGATGACTGTGGCAGGAGCTGTGGTAACA...CAGAGTGTGACCTAAAGGACACTGTGACATCGAAAGCAGGCAGTTGTGATTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR GCA 90 bp | AGTAATAAGATCCTGTCTTCCGCACAGACTCAACAGCTGGTGAGTGGAGAGCCTGCCATGGTATGTCTGTaGAGCTACGGTCTTCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: SNKILSSAQTQQLVSGEPAMVCL*SYGLPM Trigger: CATTGGAAGACCGTAGCTGCACAGACATACCATGGC...AGGCTCTCCACTCACCAGCTGTTGAGTCTGTGCGGAAGACAGGATCTTATTACT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
||
| CDS-3UTR CCA 90 bp | TCCCAATCACAACTGCCTGCTTTCGATGTCACAGTGTCCTTTAGGTCACACTCTATCAGGCCAACCACGTaGTACCACCACATGTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SQSQLPAFDVTVSFRSHSIRPTT*YHHMYC Trigger: GCAGTACATGTGGTGGTACCACGTGGTTGGCCTGAT...AGAGTGTGACCTAAAGGACACTGTGACATCGAAAGCAGGCAGTTGTGATTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR TCA 90 bp | TGGAGAAAACAGACTGGAGAAATCTCTTATTTATCTGAACGCACATGCCTAGTCGGAACAAGGCGATGGTaGGAGCCACACGCTTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: WRKQTGEISYLSERTCLVGTRRW*EPHACA Trigger: TGCGCAAGCGTGTGGCTCTCACCATCGCCTTGTTCC...GACTAGGCATGTGCGTTCAGATAAATAAGAGATTTCTCCAGTCTGTTTTCTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR TCA 90 bp | ATCCTGTCTTCCGCACAGACTCAACAGCTGGTGAGTGGAGAGCCTTGTGCAAACAATAAGGCGATTCACTaGTGCCAGAATAGGTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ILSSAQTQQLVSGEPCANNKAIH*CQNRCE Trigger: TTCACACCTATTCTGGCATCAGTGAATCGCCTTATT...GTTTGCACAAGGCTCTCCACTCACCAGCTGTTGAGTCTGTGCGGAAGACAGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR TCA 90 bp | CCCAATCACAACTGCCTGCTTTCGATGTCACAGTGTCCTTTAGGTCACACTCTGTCCTTCCCTTTGAGCTaGCTGTGGATATACATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PNHNCLLSMSQCPLGHTLSFPLS*LWIYMR Trigger: CCTCATGTATATCCACAGTCAGCTCAAAGGGAAGGA...CAGAGTGTGACCTAAAGGACACTGTGACATCGAAAGCAGGCAGTTGTGATTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR TCA 90 bp | ATGTCTTCTGGTGTGAGACCCATCTTCCAGGCTCTGGCCCATTCTCAATTTAGTCGTTCTCCACTAGAATaGCGAAGGCATCCTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MSSGVRPIFQALAHSQFSRSPLE*RRHPLL Trigger: CAGCAAAGGATGCCTTCGTCATTCTAGTGGAGAACG...ACTAAATTGAGAATGGGCCAGAGCCTGGAAGATGGGTCTCACACCAGAAGACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR TCA 90 bp | AGAAATCCCAAACGTACCCCCAAACATAAAGCACACTCACACTCGAGGGTTAACCAAAGAGGCAGACGATaGTCAGAGGCAGCACCCATA | + |
|
Preference number: 4 (lower is better) Translates to: RNPKRTPKHKAHSHSRVNQRGRR*SEAAPI Trigger: TATGGGTGCTGCCTCTGATCATCGTCTGCCTCTTTG...GTTAACCCTCGAGTGTGAGTGTGCTTTATGTTTGGGGGTACGTTTGGGATTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR GCA 90 bp | GAGAGCCTTGTGCAAACAGCCTCCTTAGAGTCCATTCTTCCAATCTGCAGAGACTTGGGGGACCTTCTTTaGTTTGCATACAGCCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: ESLVQTASLESILPICRDLGDLL*FAYSHH Trigger: ATGGTGGCTGTATGCAAAGCAAAGAAGGTCCCCCAA...GTCTCTGCAGATTGGAAGAATGGACTCTAAGGAGGCTGTTTGCACAAGGCTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR GCA 90 bp | AGTAATAAGATCCTGTCTTCCGCACAGACTCAACAGCTGGTGAGTGGAGAGCCTCTGCTCAGGAATAACTaGTTCTTTGGGGGACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SNKILSSAQTQQLVSGEPLLRNN*FFGGPS Trigger: AGAAGGTCCCCCAAAGAAGCAGTTATTCCTGAGCAG...AGGCTCTCCACTCACCAGCTGTTGAGTCTGTGCGGAAGACAGGATCTTATTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR GCA 90 bp | ATCCATTTGGCTGTTCAAGGTTGGAGAACTTTCTTGATCGCTGCTGCCATTGAATCCCAGCCAAACCGGTaGTGCAGACTATCAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: IHLAVQGWRTFLIAAAIESQPNR*CRLSAP Trigger: AGGTGCTGATAGTCTGCAGCACCGGTTTGGCTGGGA...TTCAATGGCAGCAGCGATCAAGAAAGTTCTCCAACCTTGAACAGCCAAATGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR GCA 90 bp | TTAATTAGCTGCCCCCACTGTAGTCAATCCATTTGGCTGTTCAAGGTTGGAGAACCGCAGCGCCTCCTTTaGCGGCTTCTTTCATTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LISCPHCSQSIWLFKVGEPQRLL*RLLSLL Trigger: AAGCAATGAAAGAAGCCGGCAAAGGAGGCGCTGCGG...TTCTCCAACCTTGAACAGCCAAATGGATTGACTACAGTGGGGGCAGCTAATTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR GCA 90 bp | TTGCTGGGTGCCCCAGCTTCCTTTCAGATCAGGCACACGAATGTGTGGTGGATGTTATCAAGTCCAGGTTaGATGGGTCCAAAAAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: LLGAPASFQIRHTNVWWMLSSPG*MGPKRT Trigger: TGTTCTTTTTGGACCCATGCAACCTGGACTTGATAA...CATCCACCACACATTCGTGTGCCTGATCTGAAAGGAAGCTGGGGCACCCAGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR GCA 90 bp | CCCAATCACAACTGCCTGCTTTCGATGTCACAGTGTCCTTTAGGTCACACTCTGTCAGTTTTCTGGCTCTaGTCCAGGCTTTCAAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PNHNCLLSMSQCPLGHTLSVFWL*SRLSKA Trigger: AGCCTTTGAAAGCCTGGAGCAGAGCCAGAAAACTGA...CAGAGTGTGACCTAAAGGACACTGTGACATCGAAAGCAGGCAGTTGTGATTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR CCA 90 bp | TCCCAATCACAACTGCCTGCTTTCGATGTCACAGTGTCCTTTAGGTCACACTCTAACGTCCAGAAGGGCTaGAAGACTAACAGAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SQSQLPAFDVTVSFRSHSNVQKG*KTNRGK Trigger: CTTGCCTCTGTTAGTCTTCCAGCCCTTCTGGACGTT...AGAGTGTGACCTAAAGGACACTGTGACATCGAAAGCAGGCAGTTGTGATTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR CCA 90 bp | ATGTCTTCTGGTGTGAGACCCATCTTCCAGGCTCTGGCCCATTCTCAATTTAGTAACGTCCAGAAGGGCTaGAAGACTAACAGAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: MSSGVRPIFQALAHSQFSNVQKG*KTNRGK Trigger: CTTGCCTCTGTTAGTCTTCCAGCCCTTCTGGACGTT...ACTAAATTGAGAATGGGCCAGAGCCTGGAAGATGGGTCTCACACCAGAAGACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR CCA 90 bp | AGTGGAGAGCCTTGTGCAAACAGCCTCCTTAGAGTCCATTCTTCCAATCTGCAGGCTACGGTCTTCCAATaGCTTCCATTCTCGTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SGEPCANSLLRVHSSNLQATVFQ*LPFSFG Trigger: TCCAAACGAGAATGGAAGCCATTGGAAGACCGTAGC...CTGCAGATTGGAAGAATGGACTCTAAGGAGGCTGTTTGCACAAGGCTCTCCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
||
| CDS-3UTR CCA 90 bp | ATTCTTTTGTGCTTCTACCACCCTCCCCAAGACGCTTCCCATGCATATACACCGAAAGAGAAGCAGCCATaGTATGTCTGTGCAGCTACG | + |
|
Preference number: 4 (lower is better) Translates to: ILLCFYHPPQDASHAYTPKEKQP*YVCAAT Trigger: CGTAGCTGCACAGACATACCATGGCTGCTTCTCTTT...CGGTGTATATGCATGGGAAGCGTCTTGGGGAGGGTGGTAGAAGCACAAAAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
||
| CDS-3UTR CCA 90 bp | TCCCAATCACAACTGCCTGCTTTCGATGTCACAGTGTCCTTTAGGTCACACTCTCTGGTACTGGTAGCTTaGGGCAAAAGCCAGAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: SQSQLPAFDVTVSFRSHSLVLVA*GKSQRI Trigger: AATCCTCTGGCTTTTGCCCCAAGCTACCAGTACCAG...AGAGTGTGACCTAAAGGACACTGTGACATCGAAAGCAGGCAGTTGTGATTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR CCA 90 bp | TCCCAATCACAACTGCCTGCTTTCGATGTCACAGTGTCCTTTAGGTCACACTCTACAGCGATGGAAGAATaGAATAGGTGCACTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SQSQLPAFDVTVSFRSHSTAMEE*NRCTGW Trigger: CCAGCCAGTGCACCTATTCCATTCTTCCATCGCTGT...AGAGTGTGACCTAAAGGACACTGTGACATCGAAAGCAGGCAGTTGTGATTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR CCA 90 bp | CCCAATCACAACTGCCTGCTTTCGATGTCACAGTGTCCTTTAGGTCACACTCTGACAGGAGCACAGCGATaGAAGAATGGAATAGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PNHNCLLSMSQCPLGHTLTGAQR*KNGIGA Trigger: TGCACCTATTCCATTCTTCCATCGCTGTGCTCCTGT...CAGAGTGTGACCTAAAGGACACTGTGACATCGAAAGCAGGCAGTTGTGATTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| 3UTR CAA 72 bp | ATGCTGGCTTCCCAGATCCTGCTTACACATGCACTCTaGTGTGTGTGTGTGTGTTTGTGTGTGTGGTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: MLASQILLTHAL*CVCVCLCVWFA Trigger: AGCAAACCACACACACAAACACACACACACACACAAGAGTGCATGTGTAAGCAGGATCTGGGAAGCCAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR TCA 90 bp | TCAATCCATTTGGCTGTTCAAGGTTGGAGAACTTTCTTGATCGCTGCTGCCATTCTGAAATGGCATAGATaGGGAGCGCCCGCAGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: SIHLAVQGWRTFLIAAAILKWHR*GAPADC Trigger: ACAATCTGCGGGCGCTCCTCATCTATGCCATTTCAG...AATGGCAGCAGCGATCAAGAAAGTTCTCCAACCTTGAACAGCCAAATGGATTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR TCA 90 bp | TTTTTCCTTTCTCAGAAAACAGGGAGACTGAAGATCCCAATCACAACTGCCTGCCTGAAATGGCATAGATaGGGAGCGCCCGCAGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: FFLSQKTGRLKIPITTACLKWHR*GAPADC Trigger: ACAATCTGCGGGCGCTCCTCATCTATGCCATTTCAG...GCAGGCAGTTGTGATTGGGATCTTCAGTCTCCCTGTTTTCTGAGAAAGGAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR TCA 90 bp | GAGCCTTGTGCAAACAGCCTCCTTAGAGTCCATTCTTCCAATCTGCAGAGACAGCGTTTTCCTTCCCTTTaGGCTGACTGTGGATATACA | + |
|
Preference number: 4 (lower is better) Translates to: EPCANSLLRVHSSNLQRQRFPSL*ADCGYT Trigger: TGTATATCCACAGTCAGCTCAAAGGGAAGGAAAACG...CTGTCTCTGCAGATTGGAAGAATGGACTCTAAGGAGGCTGTTTGCACAAGGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR TCA 90 bp | CCCAATCACAACTGCCTGCTTTCGATGTCACAGTGTCCTTTAGGTCACACTCTGCGTTTTCCTTCCCTTTaGGCTGACTGTGGATATACA | + |
|
Preference number: 4 (lower is better) Translates to: PNHNCLLSMSQCPLGHTLRFPSL*ADCGYT Trigger: TGTATATCCACAGTCAGCTCAAAGGGAAGGAAAACG...CAGAGTGTGACCTAAAGGACACTGTGACATCGAAAGCAGGCAGTTGTGATTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR TCA 90 bp | TGGAGAACTTTCTTGATCGCTGCTGCCATTGAAGTAATAAGATCCTGTCTTCCGGAAGGCATCCTTTGCTaGGGTGCAGAAGTTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WRTFLIAAAIEVIRSCLPEGILC*GAEVGA Trigger: AGCACCAACTTCTGCACCTCAGCAAAGGATGCCTTC...CGGAAGACAGGATCTTATTACTTCAATGGCAGCAGCGATCAAGAAAGTTCTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR TCA 90 bp | TCAATCCATTTGGCTGTTCAAGGTTGGAGAACTTTCTTGATCGCTGCTGCCATTCAAAGAGGCAGACGATaGTCAGAGGCAGCACCCATA | + |
|
Preference number: 4 (lower is better) Translates to: SIHLAVQGWRTFLIAAAIQRGRR*SEAAPI Trigger: TATGGGTGCTGCCTCTGATCATCGTCTGCCTCTTTG...AATGGCAGCAGCGATCAAGAAAGTTCTCCAACCTTGAACAGCCAAATGGATTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR GCA 90 bp | GCTGCCCCCACTGTAGTCAATCCATTTGGCTGTTCAAGGTTGGAGAACTTTCTTTTGGGGGACCTTCTTTaGTTTGCATACAGCCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: AAPTVVNPFGCSRLENFLLGDLL*FAYSHH Trigger: ATGGTGGCTGTATGCAAAGCAAAGAAGGTCCCCCAA...AAGAAAGTTCTCCAACCTTGAACAGCCAAATGGATTGACTACAGTGGGGGCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR GCA 90 bp | ATGTCTTCTGGTGTGAGACCCATCTTCCAGGCTCTGGCCCATTCTCAATTTAGTTTGGGGGACCTTCTTTaGTTTGCATACAGCCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: MSSGVRPIFQALAHSQFSLGDLL*FAYSHH Trigger: ATGGTGGCTGTATGCAAAGCAAAGAAGGTCCCCCAA...ACTAAATTGAGAATGGGCCAGAGCCTGGAAGATGGGTCTCACACCAGAAGACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR GCA 90 bp | TCCCAATCACAACTGCCTGCTTTCGATGTCACAGTGTCCTTTAGGTCACACTCTTACCACCACATGTACTaGAAAGGCCCGGAGATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SQSQLPAFDVTVSFRSHSYHHMY*KGPEIL Trigger: CAAAATCTCCGGGCCTTTGCAGTACATGTGGTGGTA...AGAGTGTGACCTAAAGGACACTGTGACATCGAAAGCAGGCAGTTGTGATTGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR GCA 90 bp | AGTGGAGAGCCTTGTGCAAACAGCCTCCTTAGAGTCCATTCTTCCAATCTGCAGAATGAAGGATCCTTTTaGCACAGTACCGAGGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SGEPCANSLLRVHSSNLQNEGSF*HSTEVV Trigger: TACCACCTCGGTACTGTGGCAAAAGGATCCTTCATT...CTGCAGATTGGAAGAATGGACTCTAAGGAGGCTGTTTGCACAAGGCTCTCCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR GCA 90 bp | AGTAATAAGATCCTGTCTTCCGCACAGACTCAACAGCTGGTGAGTGGAGAGCCTTGCAGGATTTCAGCATaGATCGTGCACAAGCGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SNKILSSAQTQQLVSGEPCRISA*IVHKRF Trigger: AAAACGCTTGTGCACGATGCATGCTGAAATCCTGCA...AGGCTCTCCACTCACCAGCTGTTGAGTCTGTGCGGAAGACAGGATCTTATTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR GCA 90 bp | CTGGTGAGTGGAGAGCCTTGTGCAAACAGCCTCCTTAGAGTCCATTCTTCCAATTGCAGGATTTCAGCATaGATCGTGCACAAGCGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LVSGEPCANSLLRVHSSNCRISA*IVHKRF Trigger: AAAACGCTTGTGCACGATGCATGCTGAAATCCTGCA...ATTGGAAGAATGGACTCTAAGGAGGCTGTTTGCACAAGGCTCTCCACTCACCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR GCA 90 bp | CCCAATCACAACTGCCTGCTTTCGATGTCACAGTGTCCTTTAGGTCACACTCTGACCAAAGGCAGCAAATaGAGGATTTCAGCATGCATC | + |
|
Preference number: 4 (lower is better) Translates to: PNHNCLLSMSQCPLGHTLTKGSK*RISACI Trigger: GATGCATGCTGAAATCCTGCATTTGCTGCCTTTGGT...CAGAGTGTGACCTAAAGGACACTGTGACATCGAAAGCAGGCAGTTGTGATTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR GCA 90 bp | GAAGAGAAAGCAACAATGAAGTTTGAAGGCGTGGCTGCAAGGCAGATTATTATCCCGCAGCGCCTCCTTTaGCGGCTTCTTTCATTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: EEKATMKFEGVAARQIIIPQRLL*RLLSLL Trigger: AAGCAATGAAAGAAGCCGGCAAAGGAGGCGCTGCGG...GATAATAATCTGCCTTGCAGCCACGCCTTCAAACTTCATTGTTGCTTTCTCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
||
| CDS-3UTR GCA 90 bp | GATTCTTCAGTTACACATTGTAGAACTCCGGATACAACGAATACCAAGGAGTGGCCGCAGCGCCTCCTTTaGCGGCTTCTTTCATTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DSSVTHCRTPDTTNTKEWPQRLL*RLLSLL Trigger: AAGCAATGAAAGAAGCCGGCAAAGGAGGCGCTGCGG...CCACTCCTTGGTATTCGTTGTATCCGGAGTTCTACAATGTGTAACTGAAGAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR CCA 90 bp | AAGATCCTGTCTTCCGCACAGACTCAACAGCTGGTGAGTGGAGAGCCTTGTGCATCACCATCAGGATCATaGACAGAACTAGTGATAACA | + |
|
Preference number: 4 (lower is better) Translates to: KILSSAQTQQLVSGEPCASPSGS*TELVIT Trigger: TGTTATCACTAGTTCTGTCCATGATCCTGATGGTGA...TGCACAAGGCTCTCCACTCACCAGCTGTTGAGTCTGTGCGGAAGACAGGATCTT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR CCA 90 bp | GTCAATCCATTTGGCTGTTCAAGGTTGGAGAACTTTCTTGATCGCTGCTGCCATAACGTCCAGAAGGGCTaGAAGACTAACAGAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VNPFGCSRLENFLDRCCHNVQKG*KTNRGK Trigger: CTTGCCTCTGTTAGTCTTCCAGCCCTTCTGGACGTT...ATGGCAGCAGCGATCAAGAAAGTTCTCCAACCTTGAACAGCCAAATGGATTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR CCA 90 bp | TCAATCCATTTGGCTGTTCAAGGTTGGAGAACTTTCTTGATCGCTGCTGCCATTATCAGGCCAACCACGTaGTACCACCACATGTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SIHLAVQGWRTFLIAAAIIRPTT*YHHMYC Trigger: GCAGTACATGTGGTGGTACCACGTGGTTGGCCTGAT...AATGGCAGCAGCGATCAAGAAAGTTCTCCAACCTTGAACAGCCAAATGGATTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR CCA 90 bp | ATCCATTTGGCTGTTCAAGGTTGGAGAACTTTCTTGATCGCTGCTGCCATTGAAATCAGGCCAACCACGTaGTACCACCACATGTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: IHLAVQGWRTFLIAAAIEIRPTT*YHHMYC Trigger: GCAGTACATGTGGTGGTACCACGTGGTTGGCCTGAT...TTCAATGGCAGCAGCGATCAAGAAAGTTCTCCAACCTTGAACAGCCAAATGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR CCA 90 bp | GAAAGGCTAAACTTGCTGGGTGCCCCAGCTTCCTTTCAGATCAGGCACACGAATCTACCATTTCGTAAATaGACAGGAAGCAATGAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: ERLNLLGAPASFQIRHTNLPFRK*TGSNER Trigger: TCGCTCATTGCTTCCTGTCCATTTACGAAATGGTAG...ATTCGTGTGCCTGATCTGAAAGGAAGCTGGGGCACCCAGCAAGTTTAGCCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR CCA 90 bp | TTTTTCCTTTCTCAGAAAACAGGGAGACTGAAGATCCCAATCACAACTGCCTGCAACACATACTTCCGGTaGGTGTGGTCCAGACCACTG | + |
|
Preference number: 4 (lower is better) Translates to: FFLSQKTGRLKIPITTACNTYFR*VWSRPL Trigger: CAGTGGTCTGGACCACACCCACCGGAAGTATGTGTT...GCAGGCAGTTGTGATTGGGATCTTCAGTCTCCCTGTTTTCTGAGAAAGGAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR CCA 90 bp | GAAAGGCTAAACTTGCTGGGTGCCCCAGCTTCCTTTCAGATCAGGCACACGAATATCTCTGCAAACTTCTaGACGTCACTCAAGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ERLNLLGAPASFQIRHTNISANF*TSLKVF Trigger: GAAAACCTTGAGTGACGTCCAGAAGTTTGCAGAGAT...ATTCGTGTGCCTGATCTGAAAGGAAGCTGGGGCACCCAGCAAGTTTAGCCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR CCA 90 bp | AGAAATCCCAAACGTACCCCCAAACATAAAGCACACTCACACTCGAGGGTTAACACAGCGATGGAAGAATaGAATAGGTGCACTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RNPKRTPKHKAHSHSRVNTAMEE*NRCTGW Trigger: CCAGCCAGTGCACCTATTCCATTCTTCCATCGCTGT...GTTAACCCTCGAGTGTGAGTGTGCTTTATGTTTGGGGGTACGTTTGGGATTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR TCA 90 bp | TTCTTGATCGCTGCTGCCATTGAAGTAATAAGATCCTGTCTTCCGCACAGACTCAGTGAACACTGTCGCTaGAATGGCATAGATGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FLIAAAIEVIRSCLPHRLSEHCR*NGIDEE Trigger: CTCCTCATCTATGCCATTTCAGCGACAGTGTTCACT...GAGTCTGTGCGGAAGACAGGATCTTATTACTTCAATGGCAGCAGCGATCAAGAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR TCA 90 bp | CCCAATCACAACTGCCTGCTTTCGATGTCACAGTGTCCTTTAGGTCACACTCTGAATAAGGCGATTCACTaGTGCCAGAATAGGTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PNHNCLLSMSQCPLGHTLNKAIH*CQNRCE Trigger: TTCACACCTATTCTGGCATCAGTGAATCGCCTTATT...CAGAGTGTGACCTAAAGGACACTGTGACATCGAAAGCAGGCAGTTGTGATTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR GCA 90 bp | TCCCAATCACAACTGCCTGCTTTCGATGTCACAGTGTCCTTTAGGTCACACTCTTGCAGGATTTCAGCATaGATCGTGCACAAGCGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SQSQLPAFDVTVSFRSHSCRISA*IVHKRF Trigger: AAAACGCTTGTGCACGATGCATGCTGAAATCCTGCA...AGAGTGTGACCTAAAGGACACTGTGACATCGAAAGCAGGCAGTTGTGATTGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR GCA 90 bp | TCATTATTTCACAATAGCTATACTCTCTCAATGCTGGCTTCCCAGATCCTGCTTCAGCCAAACCGGTGCTaGAGACTATCAGCACCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLFHNSYTLSMLASQILLQPNRC*RLSAPC Trigger: GCAAGGTGCTGATAGTCTGCAGCACCGGTTTGGCTG...AAGCAGGATCTGGGAAGCCAGCATTGAGAGAGTATAGCTATTGTGAAATAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR GCA 90 bp | TTTTTCCTTTCTCAGAAAACAGGGAGACTGAAGATCCCAATCACAACTGCCTGCGCCATGGTATGTCTGTaGAGCTACGGTCTTCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: FFLSQKTGRLKIPITTACAMVCL*SYGLPM Trigger: CATTGGAAGACCGTAGCTGCACAGACATACCATGGC...GCAGGCAGTTGTGATTGGGATCTTCAGTCTCCCTGTTTTCTGAGAAAGGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR GCA 90 bp | CAGGGATGTCCAAGTGAGCAGAACCTGATTCCCAAGTGCAAGTCCATCATCACGACCACTGTTCGGTATTaGTTCCAGTTTTGCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QGCPSEQNLIPKCKSIITTTVRY*FQFCIS Trigger: AGAAATGCAAAACTGGAAGCAATACCGAACAGTGGT...CGTGATGATGGACTTGCACTTGGGAATCAGGTTCTGCTCACTTGGACATCCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR GCA 90 bp | TCCCAATCACAACTGCCTGCTTTCGATGTCACAGTGTCCTTTAGGTCACACTCTCAGGCTTTCAAAGGCTaGATGCAAACCTGGTTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SQSQLPAFDVTVSFRSHSQAFKG*MQTWFK Trigger: CTTAAACCAGGTTTGCATGCAGCCTTTGAAAGCCTG...AGAGTGTGACCTAAAGGACACTGTGACATCGAAAGCAGGCAGTTGTGATTGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR CCA 90 bp | GAAAGGCTAAACTTGCTGGGTGCCCCAGCTTCCTTTCAGATCAGGCACACGAATTCACCATCAGGATCATaGACAGAACTAGTGATAACA | + |
|
Preference number: 4 (lower is better) Translates to: ERLNLLGAPASFQIRHTNSPSGS*TELVIT Trigger: TGTTATCACTAGTTCTGTCCATGATCCTGATGGTGA...ATTCGTGTGCCTGATCTGAAAGGAAGCTGGGGCACCCAGCAAGTTTAGCCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR CCA 90 bp | TTAATTAGCTGCCCCCACTGTAGTCAATCCATTTGGCTGTTCAAGGTTGGAGAAAACGTCCAGAAGGGCTaGAAGACTAACAGAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LISCPHCSQSIWLFKVGENVQKG*KTNRGK Trigger: CTTGCCTCTGTTAGTCTTCCAGCCCTTCTGGACGTT...TTCTCCAACCTTGAACAGCCAAATGGATTGACTACAGTGGGGGCAGCTAATTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR CCA 90 bp | GAGCCTTGTGCAAACAGCCTCCTTAGAGTCCATTCTTCCAATCTGCAGAGACAGCTACCATTTCGTAAATaGACAGGAAGCAATGAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: EPCANSLLRVHSSNLQRQLPFRK*TGSNER Trigger: TCGCTCATTGCTTCCTGTCCATTTACGAAATGGTAG...CTGTCTCTGCAGATTGGAAGAATGGACTCTAAGGAGGCTGTTTGCACAAGGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR CCA 90 bp | CATTTGGCTGTTCAAGGTTGGAGAACTTTCTTGATCGCTGCTGCCATTGAAGTAACAGCGATGGAAGAATaGAATAGGTGCACTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HLAVQGWRTFLIAAAIEVTAMEE*NRCTGW Trigger: CCAGCCAGTGCACCTATTCCATTCTTCCATCGCTGT...TACTTCAATGGCAGCAGCGATCAAGAAAGTTCTCCAACCTTGAACAGCCAAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
||
| CDS-3UTR CCA 90 bp | GTCAATCCATTTGGCTGTTCAAGGTTGGAGAACTTTCTTGATCGCTGCTGCCATGGGCCTCTGCAAACTTaGCATAGCAGGAAATGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VNPFGCSRLENFLDRCCHGPLQT*HSRKCS Trigger: TGAACATTTCCTGCTATGCCAAGTTTGCAGAGGCCC...ATGGCAGCAGCGATCAAGAAAGTTCTCCAACCTTGAACAGCCAAATGGATTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
||
| CDS-3UTR TCA 90 bp | TGGAGAAAACAGACTGGAGAAATCTCTTATTTATCTGAACGCACATGCCTAGTCACAGAGGCAAGTGTATaGAGACCTTGCCAGCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: WRKQTGEISYLSERTCLVTEASV*RPCQPR Trigger: ACGTGGCTGGCAAGGTCTTCATACACTTGCCTCTGT...GACTAGGCATGTGCGTTCAGATAAATAAGAGATTTCTCCAGTCTGTTTTCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR TCA 90 bp | ATGTCTTCTGGTGTGAGACCCATCTTCCAGGCTCTGGCCCATTCTCAATTTAGTAATAAGGCGATTCACTaGTGCCAGAATAGGTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: MSSGVRPIFQALAHSQFSNKAIH*CQNRCE Trigger: TTCACACCTATTCTGGCATCAGTGAATCGCCTTATT...ACTAAATTGAGAATGGGCCAGAGCCTGGAAGATGGGTCTCACACCAGAAGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR TCA 90 bp | ATCCATTTGGCTGTTCAAGGTTGGAGAACTTTCTTGATCGCTGCTGCCATTGAATCCTTCCCTTTGAGCTaGCTGTGGATATACATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IHLAVQGWRTFLIAAAIESFPLS*LWIYMR Trigger: CCTCATGTATATCCACAGTCAGCTCAAAGGGAAGGA...TTCAATGGCAGCAGCGATCAAGAAAGTTCTCCAACCTTGAACAGCCAAATGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR TCA 90 bp | TCCCAATCACAACTGCCTGCTTTCGATGTCACAGTGTCCTTTAGGTCACACTCTTGCACCTGTTGCTACTaGAAAGCCACAAATAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: SQSQLPAFDVTVSFRSHSCTCCY*KATNKS Trigger: GGATTTATTTGTGGCTTTTCAGTAGCAACAGGTGCA...AGAGTGTGACCTAAAGGACACTGTGACATCGAAAGCAGGCAGTTGTGATTGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR TCA 90 bp | GTCAATCCATTTGGCTGTTCAAGGTTGGAGAACTTTCTTGATCGCTGCTGCCATATAGTGCTGAGCCATTaGTCTCTGCAAACTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VNPFGCSRLENFLDRCCHIVLSH*SLQTSG Trigger: TCCAGAAGTTTGCAGAGATCAATGGCTCAGCACTAT...ATGGCAGCAGCGATCAAGAAAGTTCTCCAACCTTGAACAGCCAAATGGATTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
||
| CDS-3UTR TCA 90 bp | GAAAGGCTAAACTTGCTGGGTGCCCCAGCTTCCTTTCAGATCAGGCACACGAATAAAGCCAGAGGATTTTaGAGTCAGAGTATATTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ERLNLLGAPASFQIRHTNKARGF*SQSIFR Trigger: TCTGAATATACTCTGACTTCAAAATCCTCTGGCTTT...ATTCGTGTGCCTGATCTGAAAGGAAGCTGGGGCACCCAGCAAGTTTAGCCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR GCA 90 bp | TTTTTCCTTTCTCAGAAAACAGGGAGACTGAAGATCCCAATCACAACTGCCTGCTTGGGGGACCTTCTTTaGTTTGCATACAGCCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: FFLSQKTGRLKIPITTACLGDLL*FAYSHH Trigger: ATGGTGGCTGTATGCAAAGCAAAGAAGGTCCCCCAA...GCAGGCAGTTGTGATTGGGATCTTCAGTCTCCCTGTTTTCTGAGAAAGGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR GCA 90 bp | TTCTTGATCGCTGCTGCCATTGAAGTAATAAGATCCTGTCTTCCGCACAGACTCACCAAAGGCAGCAAATaGAGGATTTCAGCATGCATC | + |
|
Preference number: 4 (lower is better) Translates to: FLIAAAIEVIRSCLPHRLTKGSK*RISACI Trigger: GATGCATGCTGAAATCCTGCATTTGCTGCCTTTGGT...GAGTCTGTGCGGAAGACAGGATCTTATTACTTCAATGGCAGCAGCGATCAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR GCA 90 bp | ATATCCATTGGGATACTACAGGGCAGTTATCTCTGTAGCAATAATAAGCAAAGCCAGCCAAACCGGTGCTaGAGACTATCAGCACCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ISIGILQGSYLCSNNKQSQPNRC*RLSAPC Trigger: GCAAGGTGCTGATAGTCTGCAGCACCGGTTTGGCTG...GCTTTGCTTATTATTGCTACAGAGATAACTGCCCTGTAGTATCCCAATGGATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
||
| CDS-3UTR GCA 90 bp | CCCAATCACAACTGCCTGCTTTCGATGTCACAGTGTCCTTTAGGTCACACTCTGTTATCAAGTCCAGGTTaGATGGGTCCAAAAAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: PNHNCLLSMSQCPLGHTLLSSPG*MGPKRT Trigger: TGTTCTTTTTGGACCCATGCAACCTGGACTTGATAA...CAGAGTGTGACCTAAAGGACACTGTGACATCGAAAGCAGGCAGTTGTGATTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR CCA 90 bp | GAGAGCCTTGTGCAAACAGCCTCCTTAGAGTCCATTCTTCCAATCTGCAGAGACTCACCATCAGGATCATaGACAGAACTAGTGATAACA | + |
|
Preference number: 4 (lower is better) Translates to: ESLVQTASLESILPICRDSPSGS*TELVIT Trigger: TGTTATCACTAGTTCTGTCCATGATCCTGATGGTGA...GTCTCTGCAGATTGGAAGAATGGACTCTAAGGAGGCTGTTTGCACAAGGCTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR CCA 90 bp | AATCCAGACTCTTATTGCAAAAACTCTGAAGGCTCAGAAATATTCATGAGCTTTGCTTCCATTCTCGTTTaGAGCTCTGCGCGGCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NPDSYCKNSEGSEIFMSFASILV*SSARRR Trigger: CCTCCGCCGCGCAGAGCTCCAAACGAGAATGGAAGC...AAAGCTCATGAATATTTCTGAGCCTTCAGAGTTTTTGCAATAAGAGTCTGGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR CCA 90 bp | TTTTTCCTTTCTCAGAAAACAGGGAGACTGAAGATCCCAATCACAACTGCCTGCGCTACGGTCTTCCAATaGCTTCCATTCTCGTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FFLSQKTGRLKIPITTACATVFQ*LPFSFG Trigger: TCCAAACGAGAATGGAAGCCATTGGAAGACCGTAGC...GCAGGCAGTTGTGATTGGGATCTTCAGTCTCCCTGTTTTCTGAGAAAGGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR CCA 90 bp | TTTTTCCTTTCTCAGAAAACAGGGAGACTGAAGATCCCAATCACAACTGCCTGCAAAGAGAAGCAGCCATaGTATGTCTGTGCAGCTACG | + |
|
Preference number: 4 (lower is better) Translates to: FFLSQKTGRLKIPITTACKEKQP*YVCAAT Trigger: CGTAGCTGCACAGACATACCATGGCTGCTTCTCTTT...GCAGGCAGTTGTGATTGGGATCTTCAGTCTCCCTGTTTTCTGAGAAAGGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR CCA 90 bp | CAAGGTTGGAGAACTTTCTTGATCGCTGCTGCCATTGAAGTAATAAGATCCTGTCTGGTACTGGTAGCTTaGGGCAAAAGCCAGAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: QGWRTFLIAAAIEVIRSCLVLVA*GKSQRI Trigger: AATCCTCTGGCTTTTGCCCCAAGCTACCAGTACCAG...ACAGGATCTTATTACTTCAATGGCAGCAGCGATCAAGAAAGTTCTCCAACCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
||
| CDS-3UTR CCA 90 bp | CATTTGGCTGTTCAAGGTTGGAGAACTTTCTTGATCGCTGCTGCCATTGAAGTAACAGGAGCACAGCGATaGAAGAATGGAATAGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HLAVQGWRTFLIAAAIEVTGAQR*KNGIGA Trigger: TGCACCTATTCCATTCTTCCATCGCTGTGCTCCTGT...TACTTCAATGGCAGCAGCGATCAAGAAAGTTCTCCAACCTTGAACAGCCAAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
||
| CDS-3UTR CCA 90 bp | TTTTTCCTTTCTCAGAAAACAGGGAGACTGAAGATCCCAATCACAACTGCCTGCGGGCCTCTGCAAACTTaGCATAGCAGGAAATGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FFLSQKTGRLKIPITTACGPLQT*HSRKCS Trigger: TGAACATTTCCTGCTATGCCAAGTTTGCAGAGGCCC...GCAGGCAGTTGTGATTGGGATCTTCAGTCTCCCTGTTTTCTGAGAAAGGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR CCA 90 bp | TTTTTCCTTTCTCAGAAAACAGGGAGACTGAAGATCCCAATCACAACTGCCTGCCATGCTTCAGTTTTCTaGCTCTGCTCCAGGCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FFLSQKTGRLKIPITTACHASVF*LCSRLS Trigger: TGAAAGCCTGGAGCAGAGCCAGAAAACTGAAGCATG...GCAGGCAGTTGTGATTGGGATCTTCAGTCTCCCTGTTTTCTGAGAAAGGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR TCA 90 bp | GAAGAGAAAGCAACAATGAAGTTTGAAGGCGTGGCTGCAAGGCAGATTATTATCTCCTTCCCTTTGAGCTaGCTGTGGATATACATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EEKATMKFEGVAARQIIISFPLS*LWIYMR Trigger: CCTCATGTATATCCACAGTCAGCTCAAAGGGAAGGA...GATAATAATCTGCCTTGCAGCCACGCCTTCAAACTTCATTGTTGCTTTCTCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
||
| CDS-3UTR TCA 90 bp | TTAATTAGCTGCCCCCACTGTAGTCAATCCATTTGGCTGTTCAAGGTTGGAGAACGTTTTCCTTCCCTTTaGGCTGACTGTGGATATACA | + |
|
Preference number: 4 (lower is better) Translates to: LISCPHCSQSIWLFKVGERFPSL*ADCGYT Trigger: TGTATATCCACAGTCAGCTCAAAGGGAAGGAAAACG...TTCTCCAACCTTGAACAGCCAAATGGATTGACTACAGTGGGGGCAGCTAATTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR TCA 90 bp | TTTTTCCTTTCTCAGAAAACAGGGAGACTGAAGATCCCAATCACAACTGCCTGCATAGTGCTGAGCCATTaGTCTCTGCAAACTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FFLSQKTGRLKIPITTACIVLSH*SLQTSG Trigger: TCCAGAAGTTTGCAGAGATCAATGGCTCAGCACTAT...GCAGGCAGTTGTGATTGGGATCTTCAGTCTCCCTGTTTTCTGAGAAAGGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR GCA 90 bp | TTTTTCCTTTCTCAGAAAACAGGGAGACTGAAGATCCCAATCACAACTGCCTGCAATGAAGGATCCTTTTaGCACAGTACCGAGGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: FFLSQKTGRLKIPITTACNEGSF*HSTEVV Trigger: TACCACCTCGGTACTGTGGCAAAAGGATCCTTCATT...GCAGGCAGTTGTGATTGGGATCTTCAGTCTCCCTGTTTTCTGAGAAAGGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR GCA 90 bp | TCCCAATCACAACTGCCTGCTTTCGATGTCACAGTGTCCTTTAGGTCACACTCTACCACTGTTCGGTATTaGTTCCAGTTTTGCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SQSQLPAFDVTVSFRSHSTTVRY*FQFCIS Trigger: AGAAATGCAAAACTGGAAGCAATACCGAACAGTGGT...AGAGTGTGACCTAAAGGACACTGTGACATCGAAAGCAGGCAGTTGTGATTGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR CCA 90 bp | TTCTTGATCGCTGCTGCCATTGAAGTAATAAGATCCTGTCTTCCGCACAGACTCATCTCTGCAAACTTCTaGACGTCACTCAAGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FLIAAAIEVIRSCLPHRLISANF*TSLKVF Trigger: GAAAACCTTGAGTGACGTCCAGAAGTTTGCAGAGAT...GAGTCTGTGCGGAAGACAGGATCTTATTACTTCAATGGCAGCAGCGATCAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
||
| CDS-3UTR CCA 90 bp | TCATTATTTCACAATAGCTATACTCTCTCAATGCTGGCTTCCCAGATCCTGCTTCTGGTACTGGTAGCTTaGGGCAAAAGCCAGAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: SLFHNSYTLSMLASQILLLVLVA*GKSQRI Trigger: AATCCTCTGGCTTTTGCCCCAAGCTACCAGTACCAG...AAGCAGGATCTGGGAAGCCAGCATTGAGAGAGTATAGCTATTGTGAAATAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR TCA 90 bp | TGGAGAAAACAGACTGGAGAAATCTCTTATTTATCTGAACGCACATGCCTAGTCTCCTTCCCTTTGAGCTaGCTGTGGATATACATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: WRKQTGEISYLSERTCLVSFPLS*LWIYMR Trigger: CCTCATGTATATCCACAGTCAGCTCAAAGGGAAGGA...GACTAGGCATGTGCGTTCAGATAAATAAGAGATTTCTCCAGTCTGTTTTCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR TCA 90 bp | ATCCATTTGGCTGTTCAAGGTTGGAGAACTTTCTTGATCGCTGCTGCCATTGAATGCACCTGTTGCTACTaGAAAGCCACAAATAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: IHLAVQGWRTFLIAAAIECTCCY*KATNKS Trigger: GGATTTATTTGTGGCTTTTCAGTAGCAACAGGTGCA...TTCAATGGCAGCAGCGATCAAGAAAGTTCTCCAACCTTGAACAGCCAAATGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
||
| CDS-3UTR TCA 90 bp | GATTCTTCAGTTACACATTGTAGAACTCCGGATACAACGAATACCAAGGAGTGGATAGTGCTGAGCCATTaGTCTCTGCAAACTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: DSSVTHCRTPDTTNTKEWIVLSH*SLQTSG Trigger: TCCAGAAGTTTGCAGAGATCAATGGCTCAGCACTAT...CCACTCCTTGGTATTCGTTGTATCCGGAGTTCTACAATGTGTAACTGAAGAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR GCA 90 bp | TCATTATTTCACAATAGCTATACTCTCTCAATGCTGGCTTCCCAGATCCTGCTTTACCACCACATGTACTaGAAAGGCCCGGAGATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLFHNSYTLSMLASQILLYHHMY*KGPEIL Trigger: CAAAATCTCCGGGCCTTTGCAGTACATGTGGTGGTA...AAGCAGGATCTGGGAAGCCAGCATTGAGAGAGTATAGCTATTGTGAAATAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR GCA 90 bp | GATTCTTCAGTTACACATTGTAGAACTCCGGATACAACGAATACCAAGGAGTGGAATGAAGGATCCTTTTaGCACAGTACCGAGGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: DSSVTHCRTPDTTNTKEWNEGSF*HSTEVV Trigger: TACCACCTCGGTACTGTGGCAAAAGGATCCTTCATT...CCACTCCTTGGTATTCGTTGTATCCGGAGTTCTACAATGTGTAACTGAAGAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR CCA 90 bp | TGGAGAACTTTCTTGATCGCTGCTGCCATTGAAGTAATAAGATCCTGTCTTCCGCTACCATTTCGTAAATaGACAGGAAGCAATGAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: WRTFLIAAAIEVIRSCLPLPFRK*TGSNER Trigger: TCGCTCATTGCTTCCTGTCCATTTACGAAATGGTAG...CGGAAGACAGGATCTTATTACTTCAATGGCAGCAGCGATCAAGAAAGTTCTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR CCA 90 bp | TGGAGAAAACAGACTGGAGAAATCTCTTATTTATCTGAACGCACATGCCTAGTCGCTACGGTCTTCCAATaGCTTCCATTCTCGTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: WRKQTGEISYLSERTCLVATVFQ*LPFSFG Trigger: TCCAAACGAGAATGGAAGCCATTGGAAGACCGTAGC...GACTAGGCATGTGCGTTCAGATAAATAAGAGATTTCTCCAGTCTGTTTTCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR CCA 90 bp | TCAATCCATTTGGCTGTTCAAGGTTGGAGAACTTTCTTGATCGCTGCTGCCATTCAAGTCCAGGTTGCATaGGTCCAAAAAGAACACATA | + |
|
Preference number: 4 (lower is better) Translates to: SIHLAVQGWRTFLIAAAIQVQVA*VQKEHI Trigger: TATGTGTTCTTTTTGGACCCATGCAACCTGGACTTG...AATGGCAGCAGCGATCAAGAAAGTTCTCCAACCTTGAACAGCCAAATGGATTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
||
| CDS-3UTR CCA 90 bp | TTTTTCCTTTCTCAGAAAACAGGGAGACTGAAGATCCCAATCACAACTGCCTGCCAAGTCCAGGTTGCATaGGTCCAAAAAGAACACATA | + |
|
Preference number: 4 (lower is better) Translates to: FFLSQKTGRLKIPITTACQVQVA*VQKEHI Trigger: TATGTGTTCTTTTTGGACCCATGCAACCTGGACTTG...GCAGGCAGTTGTGATTGGGATCTTCAGTCTCCCTGTTTTCTGAGAAAGGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR CCA 90 bp | TTTTTCCTTTCTCAGAAAACAGGGAGACTGAAGATCCCAATCACAACTGCCTGCATCTCTGCAAACTTCTaGACGTCACTCAAGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FFLSQKTGRLKIPITTACISANF*TSLKVF Trigger: GAAAACCTTGAGTGACGTCCAGAAGTTTGCAGAGAT...GCAGGCAGTTGTGATTGGGATCTTCAGTCTCCCTGTTTTCTGAGAAAGGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR CCA 90 bp | TCATTATTTCACAATAGCTATACTCTCTCAATGCTGGCTTCCCAGATCCTGCTTGGGCCTCTGCAAACTTaGCATAGCAGGAAATGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLFHNSYTLSMLASQILLGPLQT*HSRKCS Trigger: TGAACATTTCCTGCTATGCCAAGTTTGCAGAGGCCC...AAGCAGGATCTGGGAAGCCAGCATTGAGAGAGTATAGCTATTGTGAAATAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| 3UTR CAA 72 bp | CCTTTGAAAGGAAGCACATTAGCAAATAGCTGCTCGTaGAGCCCTCAGAACATTGTATGCAATCCCATAACA | + |
|
Preference number: 4 (lower is better) Translates to: PLKGSTLANSCS*SPQNIVCNPIT Trigger: TGTTATGGGATTGCATACAATGTTCTGAGGGCTCAACGAGCAGCTATTTGCTAATGTGCTTCCTTTCAAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR GCA 90 bp | AATCCAGACTCTTATTGCAAAAACTCTGAAGGCTCAGAAATATTCATGAGCTTTGGTGATCAGGGCCTCTaGAAACTTGGCATAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NPDSYCKNSEGSEIFMSFGDQGL*KLGIAG Trigger: TCCTGCTATGCCAAGTTTGCAGAGGCCCTGATCACC...AAAGCTCATGAATATTTCTGAGCCTTCAGAGTTTTTGCAATAAGAGTCTGGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR CCA 90 bp | TTTTTCCTTTCTCAGAAAACAGGGAGACTGAAGATCCCAATCACAACTGCCTGCTCACCATCAGGATCATaGACAGAACTAGTGATAACA | + |
|
Preference number: 4 (lower is better) Translates to: FFLSQKTGRLKIPITTACSPSGS*TELVIT Trigger: TGTTATCACTAGTTCTGTCCATGATCCTGATGGTGA...GCAGGCAGTTGTGATTGGGATCTTCAGTCTCCCTGTTTTCTGAGAAAGGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| 3UTR CAA 72 bp | TCAATCCATTTGGCTGTTCAAGGTTGGAGAACTTTCTaGATCGCTGCTGCCATTGAAGTAATAAGATCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SIHLAVQGWRTF*IAAAIEVIRSC Trigger: ACAGGATCTTATTACTTCAATGGCAGCAGCGATCAAGAAAGTTCTCCAACCTTGAACAGCCAAATGGATTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR TCA 90 bp | TTAATTAGCTGCCCCCACTGTAGTCAATCCATTTGGCTGTTCAAGGTTGGAGAAAAAGCCAGAGGATTTTaGAGTCAGAGTATATTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LISCPHCSQSIWLFKVGEKARGF*SQSIFR Trigger: TCTGAATATACTCTGACTTCAAAATCCTCTGGCTTT...TTCTCCAACCTTGAACAGCCAAATGGATTGACTACAGTGGGGGCAGCTAATTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
||
| CDS-3UTR TCA 90 bp | TTTTTCCTTTCTCAGAAAACAGGGAGACTGAAGATCCCAATCACAACTGCCTGCAAAGCCAGAGGATTTTaGAGTCAGAGTATATTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FFLSQKTGRLKIPITTACKARGF*SQSIFR Trigger: TCTGAATATACTCTGACTTCAAAATCCTCTGGCTTT...GCAGGCAGTTGTGATTGGGATCTTCAGTCTCCCTGTTTTCTGAGAAAGGAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR GCA 90 bp | GAAGAGAAAGCAACAATGAAGTTTGAAGGCGTGGCTGCAAGGCAGATTATTATCTTATCAAGTCCAGGTTaGATGGGTCCAAAAAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: EEKATMKFEGVAARQIIILSSPG*MGPKRT Trigger: TGTTCTTTTTGGACCCATGCAACCTGGACTTGATAA...GATAATAATCTGCCTTGCAGCCACGCCTTCAAACTTCATTGTTGCTTTCTCTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
||
| CDS-3UTR CCA 90 bp | TCATTATTTCACAATAGCTATACTCTCTCAATGCTGGCTTCCCAGATCCTGCTTCAAGTCCAGGTTGCATaGGTCCAAAAAGAACACATA | + |
|
Preference number: 4 (lower is better) Translates to: SLFHNSYTLSMLASQILLQVQVA*VQKEHI Trigger: TATGTGTTCTTTTTGGACCCATGCAACCTGGACTTG...AAGCAGGATCTGGGAAGCCAGCATTGAGAGAGTATAGCTATTGTGAAATAATGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| 3UTR CAA 72 bp | TTCCTCATCGTCAAAACGTCAATGATACCTACAAACTaGACAAGGCTTCTTGAGGATTCAGTATTATGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: FLIVKTSMIPTN*TRLLEDSVLCR Trigger: CCGACATAATACTGAATCCTCAAGAAGCCTTGTCAAGTTTGTAGGTATCATTGACGTTTTGACGATGAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
||
| CDS-3UTR GCA 90 bp | AATCCAGACTCTTATTGCAAAAACTCTGAAGGCTCAGAAATATTCATGAGCTTTTGCAGGATTTCAGCATaGATCGTGCACAAGCGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NPDSYCKNSEGSEIFMSFCRISA*IVHKRF Trigger: AAAACGCTTGTGCACGATGCATGCTGAAATCCTGCA...AAAGCTCATGAATATTTCTGAGCCTTCAGAGTTTTTGCAATAAGAGTCTGGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR GCA 90 bp | AATCCAGACTCTTATTGCAAAAACTCTGAAGGCTCAGAAATATTCATGAGCTTTACCAAAGGCAGCAAATaGAGGATTTCAGCATGCATC | + |
|
Preference number: 4 (lower is better) Translates to: NPDSYCKNSEGSEIFMSFTKGSK*RISACI Trigger: GATGCATGCTGAAATCCTGCATTTGCTGCCTTTGGT...AAAGCTCATGAATATTTCTGAGCCTTCAGAGTTTTTGCAATAAGAGTCTGGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| 3UTR CAA 72 bp | TGTGTGTGTGTGTGTGTTTGTGTGTGTGGTTTGCTGTaGTTTTTAATCCAGACTCTTATTGCAAAAACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVCGLL*FLIQTLIAKTL Trigger: CAGAGTTTTTGCAATAAGAGTCTGGATTAAAAACAACAGCAAACCACACACACAAACACACACACACACACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR CAA 90 bp | TCTTCCGCACAGACTCAACAGCTGGTGAGTGGAGAGCCTTGTGCAAACAGCCTCGGCTTCCATTCTCGTTaGGAGCTCTGCGCGGCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSAQTQQLVSGEPCANSLGFHSR*ELCAAE Trigger: CTCCGCCGCGCAGAGCTCCAAACGAGAATGGAAGCC...GAGGCTGTTTGCACAAGGCTCTCCACTCACCAGCTGTTGAGTCTGTGCGGAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
||
| CDS CCA 90 bp | AAAGAGAAGCAGCCATGGTATGTCTGTGCAGCTACGGTCTTCCAATaGCTTCCATTCTCGTTTGGAGCTCTGCGCGGCGGAGGCGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: KEKQPWYVCAATVFQ*LPFSFGALRGGGGA Trigger: AGCTCCGCCTCCGCCGCGCAGAGCTCCAAACGAGAATGGAAGCCATTGGAAGACCGTAGCTGCACAGACATACCATGGCTGCTTCTCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102911.10 ENSMUST00000107646.9 ENSMUST00000107647.8 ENSMUST00000107651.9 |
||
| CDS-3UTR CAA 90 bp | AAGATCCTGTCTTCCGCACAGACTCAACAGCTGGTGAGTGGAGAGCCTTGTGCAAAGTCCCCCACTGTGTaGATGGCAGCCACTCGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KILSSAQTQQLVSGEPCAKSPTV*MAATRR Trigger: TCTGCGAGTGGCTGCCATCAACACAGTGGGGGACTT...TGCACAAGGCTCTCCACTCACCAGCTGTTGAGTCTGTGCGGAAGACAGGATCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR CAA 90 bp | ATCCTGTCTTCCGCACAGACTCAACAGCTGGTGAGTGGAGAGCCTTGTGCAAACTCCGCAGCGCCTCCTTaGCCGGCTTCTTTCATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ILSSAQTQQLVSGEPCANSAAPP*PASFIA Trigger: AGCAATGAAAGAAGCCGGCAAAGGAGGCGCTGCGGA...GTTTGCACAAGGCTCTCCACTCACCAGCTGTTGAGTCTGTGCGGAAGACAGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR CAA 90 bp | CCCAATCACAACTGCCTGCTTTCGATGTCACAGTGTCCTTTAGGTCACACTCTGGGCTTCCATTCTCGTTaGGAGCTCTGCGCGGCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PNHNCLLSMSQCPLGHTLGFHSR*ELCAAE Trigger: CTCCGCCGCGCAGAGCTCCAAACGAGAATGGAAGCC...CAGAGTGTGACCTAAAGGACACTGTGACATCGAAAGCAGGCAGTTGTGATTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR CAA 90 bp | CCCAAACGTACCCCCAAACATAAAGCACACTCACACTCGAGGGTTAACACCAACGGCTTCCATTCTCGTTaGGAGCTCTGCGCGGCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PKRTPKHKAHSHSRVNTNGFHSR*ELCAAE Trigger: CTCCGCCGCGCAGAGCTCCAAACGAGAATGGAAGCC...GTTGGTGTTAACCCTCGAGTGTGAGTGTGCTTTATGTTTGGGGGTACGTTTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR CAA 90 bp | CAGGGATGTCCAAGTGAGCAGAACCTGATTCCCAAGTGCAAGTCCATCATCACGAAGTCCCCCACTGTGTaGATGGCAGCCACTCGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: QGCPSEQNLIPKCKSIITKSPTV*MAATRR Trigger: TCTGCGAGTGGCTGCCATCAACACAGTGGGGGACTT...CGTGATGATGGACTTGCACTTGGGAATCAGGTTCTGCTCACTTGGACATCCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR CAA 90 bp | TTGCTGGGTGCCCCAGCTTCCTTTCAGATCAGGCACACGAATGTGTGGTGGATGCAGACTATCAGCACCTaGCCTAGGAACAGCATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LLGAPASFQIRHTNVWWMQTIST*PRNSMK Trigger: CTTCATGCTGTTCCTAGGCAAGGTGCTGATAGTCTG...CATCCACCACACATTCGTGTGCCTGATCTGAAAGGAAGCTGGGGCACCCAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR CAA 90 bp | GAGAGCCTTGTGCAAACAGCCTCCTTAGAGTCCATTCTTCCAATCTGCAGAGACTCCGCAGCGCCTCCTTaGCCGGCTTCTTTCATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ESLVQTASLESILPICRDSAAPP*PASFIA Trigger: AGCAATGAAAGAAGCCGGCAAAGGAGGCGCTGCGGA...GTCTCTGCAGATTGGAAGAATGGACTCTAAGGAGGCTGTTTGCACAAGGCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR CAA 90 bp | GCTGCTGCCATTGAAGTAATAAGATCCTGTCTTCCGCACAGACTCAACAGCTGGGTGAGAGCCACACGCTaGCGCATAACCAGCATGATC | + |
|
Preference number: 5 (lower is better) Translates to: AAAIEVIRSCLPHRLNSWVRATR*RITSMI Trigger: GATCATGCTGGTTATGCGCAAGCGTGTGGCTCTCAC...CCAGCTGTTGAGTCTGTGCGGAAGACAGGATCTTATTACTTCAATGGCAGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR CAA 90 bp | CCCAATCACAACTGCCTGCTTTCGATGTCACAGTGTCCTTTAGGTCACACTCTGGTGAGAGCCACACGCTaGCGCATAACCAGCATGATC | + |
|
Preference number: 5 (lower is better) Translates to: PNHNCLLSMSQCPLGHTLVRATR*RITSMI Trigger: GATCATGCTGGTTATGCGCAAGCGTGTGGCTCTCAC...CAGAGTGTGACCTAAAGGACACTGTGACATCGAAAGCAGGCAGTTGTGATTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR CAA 90 bp | ATCCTGTCTTCCGCACAGACTCAACAGCTGGTGAGTGGAGAGCCTTGTGCAAACGTACTCCACGAAGCCTaGCTCATTCTGAACAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: ILSSAQTQQLVSGEPCANVLHEA*LILNST Trigger: AGTGCTGTTCAGAATGAGCAAGGCTTCGTGGAGTAC...GTTTGCACAAGGCTCTCCACTCACCAGCTGTTGAGTCTGTGCGGAAGACAGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR CAA 90 bp | GAAAGGCTAAACTTGCTGGGTGCCCCAGCTTCCTTTCAGATCAGGCACACGAATTTTGGGGGACCTTCTTaGCTTTGCATACAGCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: ERLNLLGAPASFQIRHTNFGGPS*LCIQPP Trigger: TGGTGGCTGTATGCAAAGCAAAGAAGGTCCCCCAAA...ATTCGTGTGCCTGATCTGAAAGGAAGCTGGGGCACCCAGCAAGTTTAGCCTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR CAA 90 bp | ATGTCTTCTGGTGTGAGACCCATCTTCCAGGCTCTGGCCCATTCTCAATTTAGTGTGAGAGCCACACGCTaGCGCATAACCAGCATGATC | + |
|
Preference number: 5 (lower is better) Translates to: MSSGVRPIFQALAHSQFSVRATR*RITSMI Trigger: GATCATGCTGGTTATGCGCAAGCGTGTGGCTCTCAC...ACTAAATTGAGAATGGGCCAGAGCCTGGAAGATGGGTCTCACACCAGAAGACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR CAA 90 bp | GAAAGGCTAAACTTGCTGGGTGCCCCAGCTTCCTTTCAGATCAGGCACACGAATGTACTCCACGAAGCCTaGCTCATTCTGAACAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: ERLNLLGAPASFQIRHTNVLHEA*LILNST Trigger: AGTGCTGTTCAGAATGAGCAAGGCTTCGTGGAGTAC...ATTCGTGTGCCTGATCTGAAAGGAAGCTGGGGCACCCAGCAAGTTTAGCCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR CAA 90 bp | ATCCTGTCTTCCGCACAGACTCAACAGCTGGTGAGTGGAGAGCCTTGTGCAAACACCATCCTGGGGATTTaGACGAGGGTGATAATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ILSSAQTQQLVSGEPCANTILGI*TRVIMK Trigger: CTTCATTATCACCCTCGTCAAAATCCCCAGGATGGT...GTTTGCACAAGGCTCTCCACTCACCAGCTGTTGAGTCTGTGCGGAAGACAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR CAA 90 bp | CTGTCTTCCGCACAGACTCAACAGCTGGTGAGTGGAGAGCCTTGTGCAAACAGCCAGAAGTTGGTGCTATaGATAGCTGTGGCTGTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: LSSAQTQQLVSGEPCANSQKLVL*IAVAVY Trigger: ATACACAGCCACAGCTATCAATAGCACCAACTTCTG...GCTGTTTGCACAAGGCTCTCCACTCACCAGCTGTTGAGTCTGTGCGGAAGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR CAA 90 bp | CTGTCTTCCGCACAGACTCAACAGCTGGTGAGTGGAGAGCCTTGTGCAAACAGCCCATACTGTGTAATCTaGCTGGTAGTTGAGCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LSSAQTQQLVSGEPCANSPYCVI*LVVEQH Trigger: ATGCTGCTCAACTACCAGCAAGATTACACAGTATGG...GCTGTTTGCACAAGGCTCTCCACTCACCAGCTGTTGAGTCTGTGCGGAAGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR CAA 90 bp | AGTGGAGAGCCTTGTGCAAACAGCCTCCTTAGAGTCCATTCTTCCAATCTGCAGTTTGGGGGACCTTCTTaGCTTTGCATACAGCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: SGEPCANSLLRVHSSNLQFGGPS*LCIQPP Trigger: TGGTGGCTGTATGCAAAGCAAAGAAGGTCCCCCAAA...CTGCAGATTGGAAGAATGGACTCTAAGGAGGCTGTTTGCACAAGGCTCTCCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR CAA 90 bp | GAGCCTTGTGCAAACAGCCTCCTTAGAGTCCATTCTTCCAATCTGCAGAGACAGTTTGGGGGACCTTCTTaGCTTTGCATACAGCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: EPCANSLLRVHSSNLQRQFGGPS*LCIQPP Trigger: TGGTGGCTGTATGCAAAGCAAAGAAGGTCCCCCAAA...CTGTCTCTGCAGATTGGAAGAATGGACTCTAAGGAGGCTGTTTGCACAAGGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR CAA 90 bp | CCCAATCACAACTGCCTGCTTTCGATGTCACAGTGTCCTTTAGGTCACACTCTGTTTGGGGGACCTTCTTaGCTTTGCATACAGCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: PNHNCLLSMSQCPLGHTLFGGPS*LCIQPP Trigger: TGGTGGCTGTATGCAAAGCAAAGAAGGTCCCCCAAA...CAGAGTGTGACCTAAAGGACACTGTGACATCGAAAGCAGGCAGTTGTGATTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR CAA 90 bp | CTGGTGAGTGGAGAGCCTTGTGCAAACAGCCTCCTTAGAGTCCATTCTTCCAATGCTGAGGTGCAGAAGTaGGTGCTATTGATAGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LVSGEPCANSLLRVHSSNAEVQK*VLLIAV Trigger: CACAGCTATCAATAGCACCAACTTCTGCACCTCAGC...ATTGGAAGAATGGACTCTAAGGAGGCTGTTTGCACAAGGCTCTCCACTCACCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR CAA 90 bp | TCAATCCATTTGGCTGTTCAAGGTTGGAGAACTTTCTTGATCGCTGCTGCCATTAAGTCCCCCACTGTGTaGATGGCAGCCACTCGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SIHLAVQGWRTFLIAAAIKSPTV*MAATRR Trigger: TCTGCGAGTGGCTGCCATCAACACAGTGGGGGACTT...AATGGCAGCAGCGATCAAGAAAGTTCTCCAACCTTGAACAGCCAAATGGATTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR CAA 90 bp | TCCCATGCATATACACCGCCATACCCAGCCCAATTTGAGACTGGGAGTGATATCATCCTGACACTAGTCTaGCTGCTGCACCTGTTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: SHAYTPPYPAQFETGSDIILTLV*LLHLLL Trigger: TAGCAACAGGTGCAGCAGCAAGACTAGTGTCAGGAT...GATATCACTCCCAGTCTCAAATTGGGCTGGGTATGGCGGTGTATATGCATGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
||
| CDS-3UTR CAA 90 bp | CCCAATCACAACTGCCTGCTTTCGATGTCACAGTGTCCTTTAGGTCACACTCTGATCCTGACACTAGTCTaGCTGCTGCACCTGTTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: PNHNCLLSMSQCPLGHTLILTLV*LLHLLL Trigger: TAGCAACAGGTGCAGCAGCAAGACTAGTGTCAGGAT...CAGAGTGTGACCTAAAGGACACTGTGACATCGAAAGCAGGCAGTTGTGATTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR CAA 90 bp | CCCAAACGTACCCCCAAACATAAAGCACACTCACACTCGAGGGTTAACACCAACATCCTGACACTAGTCTaGCTGCTGCACCTGTTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: PKRTPKHKAHSHSRVNTNILTLV*LLHLLL Trigger: TAGCAACAGGTGCAGCAGCAAGACTAGTGTCAGGAT...GTTGGTGTTAACCCTCGAGTGTGAGTGTGCTTTATGTTTGGGGGTACGTTTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR CAA 90 bp | ATCCTGTCTTCCGCACAGACTCAACAGCTGGTGAGTGGAGAGCCTTGTGCAAACGACCACTGTTCGGTATaGCTTCCAGTTTTGCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: ILSSAQTQQLVSGEPCANDHCSV*LPVLHF Trigger: GAAATGCAAAACTGGAAGCAATACCGAACAGTGGTC...GTTTGCACAAGGCTCTCCACTCACCAGCTGTTGAGTCTGTGCGGAAGACAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
||
| CDS TCA 90 bp | CATAACCAGCATGATCAGGAAGAGAATGACAGTGAACACTGTCGCTaGAATGGCATAGATGAGGAGCGCCCGCAGATTGTCCTCAGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: HNQHDQEENDSEHCR*NGIDEERPQIVLSY Trigger: ATAGCTGAGGACAATCTGCGGGCGCTCCTCATCTATGCCATTTCAGCGACAGTGTTCACTGTCATTCTCTTCCTGATCATGCTGGTTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 ENSMUST00000107646.9 ENSMUST00000107647.8 ENSMUST00000107651.9 |
||
| CDS GCA 90 bp | TCCCAATGCAGAAGAGAACAAAGAGAAGCAGCCATGGTATGTCTGTaGAGCTACGGTCTTCCAATGGCTTCCATTCTCGTTTGGAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SQCRREQREAAMVCL*SYGLPMASILVWSS Trigger: AGAGCTCCAAACGAGAATGGAAGCCATTGGAAGACCGTAGCTGCACAGACATACCATGGCTGCTTCTCTTTGTTCTCTTCTGCATTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102911.10 ENSMUST00000107646.9 ENSMUST00000107647.8 ENSMUST00000107651.9 |
||
| CDS-3UTR CAA 90 bp | TGGAGAACTTTCTTGATCGCTGCTGCCATTGAAGTAATAAGATCCTGTCTTCCGGTGAGAGCCACACGCTaGCGCATAACCAGCATGATC | + |
|
Preference number: 5 (lower is better) Translates to: WRTFLIAAAIEVIRSCLPVRATR*RITSMI Trigger: GATCATGCTGGTTATGCGCAAGCGTGTGGCTCTCAC...CGGAAGACAGGATCTTATTACTTCAATGGCAGCAGCGATCAAGAAAGTTCTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR CAA 90 bp | TCCCAATCACAACTGCCTGCTTTCGATGTCACAGTGTCCTTTAGGTCACACTCTGTACTCCACGAAGCCTaGCTCATTCTGAACAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: SQSQLPAFDVTVSFRSHSVLHEA*LILNST Trigger: AGTGCTGTTCAGAATGAGCAAGGCTTCGTGGAGTAC...AGAGTGTGACCTAAAGGACACTGTGACATCGAAAGCAGGCAGTTGTGATTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR CAA 90 bp | CCCAATCACAACTGCCTGCTTTCGATGTCACAGTGTCCTTTAGGTCACACTCTGACCATCCTGGGGATTTaGACGAGGGTGATAATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PNHNCLLSMSQCPLGHTLTILGI*TRVIMK Trigger: CTTCATTATCACCCTCGTCAAAATCCCCAGGATGGT...CAGAGTGTGACCTAAAGGACACTGTGACATCGAAAGCAGGCAGTTGTGATTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR CAA 90 bp | CAGGGATGTCCAAGTGAGCAGAACCTGATTCCCAAGTGCAAGTCCATCATCACGCCATACTGTGTAATCTaGCTGGTAGTTGAGCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: QGCPSEQNLIPKCKSIITPYCVI*LVVEQH Trigger: ATGCTGCTCAACTACCAGCAAGATTACACAGTATGG...CGTGATGATGGACTTGCACTTGGGAATCAGGTTCTGCTCACTTGGACATCCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR CAA 90 bp | GATTCTTCAGTTACACATTGTAGAACTCCGGATACAACGAATACCAAGGAGTGGTCCGCAGCGCCTCCTTaGCCGGCTTCTTTCATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: DSSVTHCRTPDTTNTKEWSAAPP*PASFIA Trigger: AGCAATGAAAGAAGCCGGCAAAGGAGGCGCTGCGGA...CCACTCCTTGGTATTCGTTGTATCCGGAGTTCTACAATGTGTAACTGAAGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR CAA 90 bp | TCCCATGCATATACACCGCCATACCCAGCCCAATTTGAGACTGGGAGTGATATCTTGCTGCTGCACCTGTaGCTACTGAAAAGCCACAAA | + |
|
Preference number: 5 (lower is better) Translates to: SHAYTPPYPAQFETGSDILLLHL*LLKSHK Trigger: TTTGTGGCTTTTCAGTAGCAACAGGTGCAGCAGCAA...GATATCACTCCCAGTCTCAAATTGGGCTGGGTATGGCGGTGTATATGCATGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
||
| CDS CCA 90 bp | CAGTGCTATAGACTTGATCTTCCTGTTTATCAAGTCCAGGTTGCATaGGTCCAAAAAGAACACATACTTCCGGTGGGTGTGGTCCAGACC | + |
|
Preference number: 5 (lower is better) Translates to: QCYRLDLPVYQVQVA*VQKEHILPVGVVQT Trigger: GGTCTGGACCACACCCACCGGAAGTATGTGTTCTTTTTGGACCCATGCAACCTGGACTTGATAAACAGGAAGATCAAGTCTATAGCACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000102911.10 ENSMUST00000107646.9 ENSMUST00000107647.8 ENSMUST00000107651.9 |
||
| CDS-3UTR CAA 90 bp | CTGGTGAGTGGAGAGCCTTGTGCAAACAGCCTCCTTAGAGTCCATTCTTCCAATCAGAAGTTGGTGCTATaGATAGCTGTGGCTGTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: LVSGEPCANSLLRVHSSNQKLVL*IAVAVY Trigger: ATACACAGCCACAGCTATCAATAGCACCAACTTCTG...ATTGGAAGAATGGACTCTAAGGAGGCTGTTTGCACAAGGCTCTCCACTCACCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR CAA 90 bp | GCTGCTGCCATTGAAGTAATAAGATCCTGTCTTCCGCACAGACTCAACAGCTGGCCAGGGCTCCCATCATaGTATTTTGTATCAATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: AAAIEVIRSCLPHRLNSWPGLPS*YFVSMA Trigger: TGCCATTGATACAAAATACAATGATGGGAGCCCTGG...CCAGCTGTTGAGTCTGTGCGGAAGACAGGATCTTATTACTTCAATGGCAGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR CAA 90 bp | ATGTCTTCTGGTGTGAGACCCATCTTCCAGGCTCTGGCCCATTCTCAATTTAGTTTGCTGCTGCACCTGTaGCTACTGAAAAGCCACAAA | + |
|
Preference number: 5 (lower is better) Translates to: MSSGVRPIFQALAHSQFSLLLHL*LLKSHK Trigger: TTTGTGGCTTTTCAGTAGCAACAGGTGCAGCAGCAA...ACTAAATTGAGAATGGGCCAGAGCCTGGAAGATGGGTCTCACACCAGAAGACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR CAA 90 bp | CCCAATCACAACTGCCTGCTTTCGATGTCACAGTGTCCTTTAGGTCACACTCTGGACCACTGTTCGGTATaGCTTCCAGTTTTGCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: PNHNCLLSMSQCPLGHTLDHCSV*LPVLHF Trigger: GAAATGCAAAACTGGAAGCAATACCGAACAGTGGTC...CAGAGTGTGACCTAAAGGACACTGTGACATCGAAAGCAGGCAGTTGTGATTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR CAA 90 bp | TGGGTGCCCCAGCTTCCTTTCAGATCAGGCACACGAATGTGTGGTGGATGCTACAAAAGCCAGAGGATTTaGAAGTCAGAGTATATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: WVPQLPFRSGTRMCGGCYKSQRI*KSEYIQ Trigger: CTGAATATACTCTGACTTCAAAATCCTCTGGCTTTT...GTAGCATCCACCACACATTCGTGTGCCTGATCTGAAAGGAAGCTGGGGCACCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS GCA 90 bp | GGTTTAAGTAGCTCAGGCACTTTTCAAGACACCAAAGGCAGCAAATaGAGGATTTCAGCATGCATCGTGCACAAGCGTTTTCCTTCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GLSSSGTFQDTKGSK*RISACIVHKRFPSL Trigger: AAGGGAAGGAAAACGCTTGTGCACGATGCATGCTGAAATCCTGCATTTGCTGCCTTTGGTGTCTTGAAAAGTGCCTGAGCTACTTAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 ENSMUST00000107646.9 ENSMUST00000107647.8 ENSMUST00000107651.9 |
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| CDS GCA 90 bp | ACTCAAGGTTTTCAACTCCTGTCGAGGACATGCTGCTACGCACAGTaGTATAGACTTGATCTTCCTGTTTATCAAGTCCAGGTTGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: TQGFQLLSRTCCYAQ*YRLDLPVYQVQVAW Trigger: CCATGCAACCTGGACTTGATAAACAGGAAGATCAAGTCTATAGCACTGTGCGTAGCAGCATGTCCTCGACAGGAGTTGAAAACCTTGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102911.10 ENSMUST00000107646.9 ENSMUST00000107647.8 ENSMUST00000107651.9 |
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| CDS GCA 90 bp | CATGCTTCAGTTTTCTGGCTCTGCTCCAGGCTTTCAAAGGCTGCATaGAAACCTGGTTTAAGTAGCTCAGGCACTTTTCAAGACACCAAA | + |
|
Preference number: 5 (lower is better) Translates to: HASVFWLCSRLSKAA*KPGLSSSGTFQDTK Trigger: TTTGGTGTCTTGAAAAGTGCCTGAGCTACTTAAACCAGGTTTGCATGCAGCCTTTGAAAGCCTGGAGCAGAGCCAGAAAACTGAAGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS CCA 90 bp | AATAAATCCCATCCCAATGCAGAAGAGAACAAAGAGAAGCAGCCATaGTATGTCTGTGCAGCTACGGTCTTCCAATGGCTTCCATTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: NKSHPNAEENKEKQP*YVCAATVFQWLPFS Trigger: CGAGAATGGAAGCCATTGGAAGACCGTAGCTGCACAGACATACCATGGCTGCTTCTCTTTGTTCTCTTCTGCATTGGGATGGGATTTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102911.10 ENSMUST00000107646.9 ENSMUST00000107647.8 ENSMUST00000107651.9 |
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| CDS-3UTR CAA 90 bp | TTAATTAGCTGCCCCCACTGTAGTCAATCCATTTGGCTGTTCAAGGTTGGAGAAGCTGAGGTGCAGAAGTaGGTGCTATTGATAGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LISCPHCSQSIWLFKVGEAEVQK*VLLIAV Trigger: CACAGCTATCAATAGCACCAACTTCTGCACCTCAGC...TTCTCCAACCTTGAACAGCCAAATGGATTGACTACAGTGGGGGCAGCTAATTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR CAA 90 bp | TGGAGAACTTTCTTGATCGCTGCTGCCATTGAAGTAATAAGATCCTGTCTTCCGCAGACTATCAGCACCTaGCCTAGGAACAGCATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: WRTFLIAAAIEVIRSCLPQTIST*PRNSMK Trigger: CTTCATGCTGTTCCTAGGCAAGGTGCTGATAGTCTG...CGGAAGACAGGATCTTATTACTTCAATGGCAGCAGCGATCAAGAAAGTTCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR CAA 90 bp | TTAATTAGCTGCCCCCACTGTAGTCAATCCATTTGGCTGTTCAAGGTTGGAGAACAGACTATCAGCACCTaGCCTAGGAACAGCATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LISCPHCSQSIWLFKVGEQTIST*PRNSMK Trigger: CTTCATGCTGTTCCTAGGCAAGGTGCTGATAGTCTG...TTCTCCAACCTTGAACAGCCAAATGGATTGACTACAGTGGGGGCAGCTAATTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
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| CDS GCA 90 bp | CAAATTCCGTTTATCCCTAGTAAAGTAGTATGTTACCACAGCTCCTaGCACAGTCATCTGCTGACAGGCGAGAATGAACTCACTGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: QIPFIPSKVVCYHSS*HSHLLTGENELTDP Trigger: TGGATCAGTGAGTTCATTCTCGCCTGTCAGCAGATGACTGTGGCAGGAGCTGTGGTAACATACTACTTTACTAGGGATAAACGGAATTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 ENSMUST00000107646.9 ENSMUST00000107647.8 ENSMUST00000107651.9 |
||
| CDS-3UTR CAA 90 bp | GTCAATCCATTTGGCTGTTCAAGGTTGGAGAACTTTCTTGATCGCTGCTGCCATGGAATAACTGCTTCTTaGGGGGACCTTCTTTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VNPFGCSRLENFLDRCCHGITAS*GDLLCF Trigger: AAAGCAAAGAAGGTCCCCCAAAGAAGCAGTTATTCC...ATGGCAGCAGCGATCAAGAAAGTTCTCCAACCTTGAACAGCCAAATGGATTGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR CAA 90 bp | TCAATCCATTTGGCTGTTCAAGGTTGGAGAACTTTCTTGATCGCTGCTGCCATTACCATCCTGGGGATTTaGACGAGGGTGATAATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SIHLAVQGWRTFLIAAAITILGI*TRVIMK Trigger: CTTCATTATCACCCTCGTCAAAATCCCCAGGATGGT...AATGGCAGCAGCGATCAAGAAAGTTCTCCAACCTTGAACAGCCAAATGGATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR CAA 90 bp | GATTCTTCAGTTACACATTGTAGAACTCCGGATACAACGAATACCAAGGAGTGGGCTGAGGTGCAGAAGTaGGTGCTATTGATAGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: DSSVTHCRTPDTTNTKEWAEVQK*VLLIAV Trigger: CACAGCTATCAATAGCACCAACTTCTGCACCTCAGC...CCACTCCTTGGTATTCGTTGTATCCGGAGTTCTACAATGTGTAACTGAAGAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR CAA 90 bp | TTTTTCCTTTCTCAGAAAACAGGGAGACTGAAGATCCCAATCACAACTGCCTGCTTGCTGCTGCACCTGTaGCTACTGAAAAGCCACAAA | + |
|
Preference number: 5 (lower is better) Translates to: FFLSQKTGRLKIPITTACLLLHL*LLKSHK Trigger: TTTGTGGCTTTTCAGTAGCAACAGGTGCAGCAGCAA...GCAGGCAGTTGTGATTGGGATCTTCAGTCTCCCTGTTTTCTGAGAAAGGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR CAA 90 bp | TCCCAATCACAACTGCCTGCTTTCGATGTCACAGTGTCCTTTAGGTCACACTCTCTGTGTAAGACACTATaGTCACTGACAAAGGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: SQSQLPAFDVTVSFRSHSLCKTL*SLTKVI Trigger: GATCACCTTTGTCAGTGACAATAGTGTCTTACACAG...AGAGTGTGACCTAAAGGACACTGTGACATCGAAAGCAGGCAGTTGTGATTGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS GCA 90 bp | AAACTTCTGGACGTCACTCAAGGTTTTCAACTCCTGTCGAGGACATaGTGCTACGCACAGTGCTATAGACTTGATCTTCCTGTTTATCAA | + |
|
Preference number: 5 (lower is better) Translates to: KLLDVTQGFQLLSRT*CYAQCYRLDLPVYQ Trigger: TTGATAAACAGGAAGATCAAGTCTATAGCACTGTGCGTAGCAGCATGTCCTCGACAGGAGTTGAAAACCTTGAGTGACGTCCAGAAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102911.10 ENSMUST00000107646.9 ENSMUST00000107647.8 ENSMUST00000107651.9 |
||
| CDS-3UTR CAA 90 bp | GATTCTTCAGTTACACATTGTAGAACTCCGGATACAACGAATACCAAGGAGTGGACCATCCTGGGGATTTaGACGAGGGTGATAATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: DSSVTHCRTPDTTNTKEWTILGI*TRVIMK Trigger: CTTCATTATCACCCTCGTCAAAATCCCCAGGATGGT...CCACTCCTTGGTATTCGTTGTATCCGGAGTTCTACAATGTGTAACTGAAGAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR CAA 90 bp | ATCCATTTGGCTGTTCAAGGTTGGAGAACTTTCTTGATCGCTGCTGCCATTGAACCATACTGTGTAATCTaGCTGGTAGTTGAGCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: IHLAVQGWRTFLIAAAIEPYCVI*LVVEQH Trigger: ATGCTGCTCAACTACCAGCAAGATTACACAGTATGG...TTCAATGGCAGCAGCGATCAAGAAAGTTCTCCAACCTTGAACAGCCAAATGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR CAA 90 bp | TCAATCCATTTGGCTGTTCAAGGTTGGAGAACTTTCTTGATCGCTGCTGCCATTCCAGGGCTCCCATCATaGTATTTTGTATCAATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SIHLAVQGWRTFLIAAAIPGLPS*YFVSMA Trigger: TGCCATTGATACAAAATACAATGATGGGAGCCCTGG...AATGGCAGCAGCGATCAAGAAAGTTCTCCAACCTTGAACAGCCAAATGGATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 |
||
| CDS-3UTR CAA 90 bp | CCCAATCACAACTGCCTGCTTTCGATGTCACAGTGTCCTTTAGGTCACACTCTGAAAAGCCAGAGGATTTaGAAGTCAGAGTATATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PNHNCLLSMSQCPLGHTLKSQRI*KSEYIQ Trigger: CTGAATATACTCTGACTTCAAAATCCTCTGGCTTTT...CAGAGTGTGACCTAAAGGACACTGTGACATCGAAAGCAGGCAGTTGTGATTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS-3UTR CAA 90 bp | CCCAATCACAACTGCCTGCTTTCGATGTCACAGTGTCCTTTAGGTCACACTCTGCCCAATATAATTTCTTaGCTGGTCATTACTCCACTA | + |
|
Preference number: 5 (lower is better) Translates to: PNHNCLLSMSQCPLGHTLPNIIS*LVITPL Trigger: TAGTGGAGTAATGACCAGCAAAGAAATTATATTGGG...CAGAGTGTGACCTAAAGGACACTGTGACATCGAAAGCAGGCAGTTGTGATTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
||
| CDS CCA 90 bp | CAATGGCAAAACACAAGAACAATACATCCACTACCATTTCGTAAATaGACAGGAAGCAATGAGCGACTAGGAAAGCAAAGAGGCAGACGA | + |
|
Preference number: 5 (lower is better) Translates to: QWQNTRTIHPLPFRK*TGSNERLGKQRGRR Trigger: TCGTCTGCCTCTTTGCTTTCCTAGTCGCTCATTGCTTCCTGTCCATTTACGAAATGGTAGTGGATGTATTGTTCTTGTGTTTTGCCATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 ENSMUST00000107647.8 ENSMUST00000107651.9 |
||
| CDS-3UTR CAA 90 bp | ATATCCATTGGGATACTACAGGGCAGTTATCTCTGTAGCAATAATAAGCAAAGCGTACTCCACGAAGCCTaGCTCATTCTGAACAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: ISIGILQGSYLCSNNKQSVLHEA*LILNST Trigger: AGTGCTGTTCAGAATGAGCAAGGCTTCGTGGAGTAC...GCTTTGCTTATTATTGCTACAGAGATAACTGCCCTGTAGTATCCCAATGGATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
||
| CDS-3UTR CAA 90 bp | GATTCTTCAGTTACACATTGTAGAACTCCGGATACAACGAATACCAAGGAGTGGCCAGGGCTCCCATCATaGTATTTTGTATCAATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: DSSVTHCRTPDTTNTKEWPGLPS*YFVSMA Trigger: TGCCATTGATACAAAATACAATGATGGGAGCCCTGG...CCACTCCTTGGTATTCGTTGTATCCGGAGTTCTACAATGTGTAACTGAAGAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR CAA 90 bp | GATTCTTCAGTTACACATTGTAGAACTCCGGATACAACGAATACCAAGGAGTGGGACCACTGTTCGGTATaGCTTCCAGTTTTGCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: DSSVTHCRTPDTTNTKEWDHCSV*LPVLHF Trigger: GAAATGCAAAACTGGAAGCAATACCGAACAGTGGTC...CCACTCCTTGGTATTCGTTGTATCCGGAGTTCTACAATGTGTAACTGAAGAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
||
| CDS-3UTR CAA 90 bp | TGGAGAACTTTCTTGATCGCTGCTGCCATTGAAGTAATAAGATCCTGTCTTCCGCTGTGTAAGACACTATaGTCACTGACAAAGGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: WRTFLIAAAIEVIRSCLPLCKTL*SLTKVI Trigger: GATCACCTTTGTCAGTGACAATAGTGTCTTACACAG...CGGAAGACAGGATCTTATTACTTCAATGGCAGCAGCGATCAAGAAAGTTCTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
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| CDS-3UTR CAA 90 bp | TCATTATTTCACAATAGCTATACTCTCTCAATGCTGGCTTCCCAGATCCTGCTTCAGAAGTTGGTGCTATaGATAGCTGTGGCTGTGTAT | + |
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Preference number: 5 (lower is better) Translates to: SLFHNSYTLSMLASQILLQKLVL*IAVAVY Trigger: ATACACAGCCACAGCTATCAATAGCACCAACTTCTG...AAGCAGGATCTGGGAAGCCAGCATTGAGAGAGTATAGCTATTGTGAAATAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
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| CDS-3UTR CAA 90 bp | TCATTATTTCACAATAGCTATACTCTCTCAATGCTGGCTTCCCAGATCCTGCTTCTGTGTAAGACACTATaGTCACTGACAAAGGTGATC | + |
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Preference number: 5 (lower is better) Translates to: SLFHNSYTLSMLASQILLLCKTL*SLTKVI Trigger: GATCACCTTTGTCAGTGACAATAGTGTCTTACACAG...AAGCAGGATCTGGGAAGCCAGCATTGAGAGAGTATAGCTATTGTGAAATAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
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| CDS-3UTR CAA 90 bp | TGGAGAACTTTCTTGATCGCTGCTGCCATTGAAGTAATAAGATCCTGTCTTCCGCCCAATATAATTTCTTaGCTGGTCATTACTCCACTA | + |
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Preference number: 5 (lower is better) Translates to: WRTFLIAAAIEVIRSCLPPNIIS*LVITPL Trigger: TAGTGGAGTAATGACCAGCAAAGAAATTATATTGGG...CGGAAGACAGGATCTTATTACTTCAATGGCAGCAGCGATCAAGAAAGTTCTCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
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| CDS-3UTR CAA 90 bp | GATTCTTCAGTTACACATTGTAGAACTCCGGATACAACGAATACCAAGGAGTGGCCCAATATAATTTCTTaGCTGGTCATTACTCCACTA | + |
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Preference number: 5 (lower is better) Translates to: DSSVTHCRTPDTTNTKEWPNIIS*LVITPL Trigger: TAGTGGAGTAATGACCAGCAAAGAAATTATATTGGG...CCACTCCTTGGTATTCGTTGTATCCGGAGTTCTACAATGTGTAACTGAAGAATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107651.9 |
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| CDS CCA 90 bp | TATAGAATTCTCGGCCAGGGCTCCCATCATTGTATTTTGTATCAATaGCAAAACACAAGAACAATACATCCACTACCATTTCGTAAATGG | + |
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Preference number: 5 (lower is better) Translates to: YRILGQGSHHCILYQ*QNTRTIHPLPFRKW Trigger: CCATTTACGAAATGGTAGTGGATGTATTGTTCTTGTGTTTTGCCATTGATACAAAATACAATGATGGGAGCCCTGGCCGAGAATTCTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 ENSMUST00000107647.8 ENSMUST00000107651.9 |
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| CDS-3UTR CAA 90 bp | TCTCTGAGCATCTCCTTTCCTCATCGTCAAAACGTCAATGATACCTACAAACTTAAAAGCCAGAGGATTTaGAAGTCAGAGTATATTCAG | + |
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Preference number: 5 (lower is better) Translates to: SLSISFPHRQNVNDTYKLKSQRI*KSEYIQ Trigger: CTGAATATACTCTGACTTCAAAATCCTCTGGCTTTT...AAGTTTGTAGGTATCATTGACGTTTTGACGATGAGGAAAGGAGATGCTCAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102911.10 |
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| CDS CCA 72 bp | AACAGAGGCAAGTGTATGAAGACCTTGCCAGCCACGTaGAACAAGGCGATGGTGAGAGCCACACGCTTGCGC | + |
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Preference number: 6 (lower is better) Translates to: NRGKCMKTLPAT*NKAMVRATRLR Trigger: GCGCAAGCGTGTGGCTCTCACCATCGCCTTGTTCCACGTGGCTGGCAAGGTCTTCATACACTTGCCTCTGTT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 ENSMUST00000107646.9 ENSMUST00000107647.8 ENSMUST00000107651.9 |
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| CDS CCA 72 bp | CAGCCATGGTATGTCTGTGCAGCTACGGTCTTCCAATaGCTTCCATTCTCGTTTGGAGCTCTGCGCGGCGGA | + |
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Preference number: 6 (lower is better) Translates to: QPWYVCAATVFQ*LPFSFGALRGG Trigger: TCCGCCGCGCAGAGCTCCAAACGAGAATGGAAGCCATTGGAAGACCGTAGCTGCACAGACATACCATGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102911.10 ENSMUST00000107646.9 ENSMUST00000107647.8 ENSMUST00000107651.9 |
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| CDS CAA 72 bp | ACCTTGCCTAGGAACAGCATGAAGTCCCCCACTGTGTaGATGGCAGCCACTCGCAGAGCGTTCTCCACTAGA | + |
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Preference number: 6 (lower is better) Translates to: TLPRNSMKSPTV*MAATRRAFSTR Trigger: TCTAGTGGAGAACGCTCTGCGAGTGGCTGCCATCAACACAGTGGGGGACTTCATGCTGTTCCTAGGCAAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 ENSMUST00000107647.8 ENSMUST00000107651.9 |
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| CDS GCA 72 bp | CCCAACTGCCCCTTGCATGCTTCAGTTTTCTGGCTCTaGTCCAGGCTTTCAAAGGCTGCATGCAAACCTGGT | + |
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Preference number: 6 (lower is better) Translates to: PNCPLHASVFWL*SRLSKAACKPG Trigger: ACCAGGTTTGCATGCAGCCTTTGAAAGCCTGGAGCAGAGCCAGAAAACTGAAGCATGCAAGGGGCAGTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
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| CDS CAA 72 bp | GCCACGTGGAACAAGGCGATGGTGAGAGCCACACGCTaGCGCATAACCAGCATGATCAGGAAGAGAATGACA | + |
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Preference number: 6 (lower is better) Translates to: ATWNKAMVRATR*RITSMIRKRMT Trigger: TGTCATTCTCTTCCTGATCATGCTGGTTATGCGCAAGCGTGTGGCTCTCACCATCGCCTTGTTCCACGTGGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 ENSMUST00000107646.9 ENSMUST00000107647.8 ENSMUST00000107651.9 |
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| CDS CAA 90 bp | ACCTTGCCAGCCACGTGGAACAAGGCGATGGTGAGAGCCACACGCTaGCGCATAACCAGCATGATCAGGAAGAGAATGACAGTGAACACT | + |
|
Preference number: 6 (lower is better) Translates to: TLPATWNKAMVRATR*RITSMIRKRMTVNT Trigger: AGTGTTCACTGTCATTCTCTTCCTGATCATGCTGGTTATGCGCAAGCGTGTGGCTCTCACCATCGCCTTGTTCCACGTGGCTGGCAAGGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 ENSMUST00000107646.9 ENSMUST00000107647.8 ENSMUST00000107651.9 |
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| CDS CAA 90 bp | ACTATCAGCACCTTGCCTAGGAACAGCATGAAGTCCCCCACTGTGTaGATGGCAGCCACTCGCAGAGCGTTCTCCACTAGAATGACGAAG | + |
|
Preference number: 6 (lower is better) Translates to: TISTLPRNSMKSPTV*MAATRRAFSTRMTK Trigger: CTTCGTCATTCTAGTGGAGAACGCTCTGCGAGTGGCTGCCATCAACACAGTGGGGGACTTCATGCTGTTCCTAGGCAAGGTGCTGATAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 ENSMUST00000107647.8 ENSMUST00000107651.9 |
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| CDS GCA 72 bp | CAAATCAGGCCAACCACGTGGTACCACCACATGTACTaGAAAGGCCCGGAGATTTTGTACTCCACGAAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: QIRPTTWYHHMY*KGPEILYSTKP Trigger: AGGCTTCGTGGAGTACAAAATCTCCGGGCCTTTGCAGTACATGTGGTGGTACCACGTGGTTGGCCTGATTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 ENSMUST00000107646.9 ENSMUST00000107647.8 ENSMUST00000107651.9 |
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| CDS CAA 72 bp | CTGCAAAGGCCCGGAGATTTTGTACTCCACGAAGCCTaGCTCATTCTGAACAGCACTGCCAGTAGTGCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: LQRPGDFVLHEA*LILNSTASSAK Trigger: CTTGGCACTACTGGCAGTGCTGTTCAGAATGAGCAAGGCTTCGTGGAGTACAAAATCTCCGGGCCTTTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 ENSMUST00000107646.9 ENSMUST00000107647.8 ENSMUST00000107651.9 |
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| CDS CAA 90 bp | CCACATGTACTGCAAAGGCCCGGAGATTTTGTACTCCACGAAGCCTaGCTCATTCTGAACAGCACTGCCAGTAGTGCCAAGGAAGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PHVLQRPGDFVLHEA*LILNSTASSAKEEK Trigger: CTTCTCTTCCTTGGCACTACTGGCAGTGCTGTTCAGAATGAGCAAGGCTTCGTGGAGTACAAAATCTCCGGGCCTTTGCAGTACATGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 ENSMUST00000107646.9 ENSMUST00000107647.8 ENSMUST00000107651.9 |
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| CDS CAA 90 bp | AAAGAGGCAGACGATGATCAGAGGCAGCACCCATACTGTGTAATCTaGCTGGTAGTTGAGCAGCATAATCCCAGCCAAACCGGTGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: KEADDDQRQHPYCVI*LVVEQHNPSQTGAA Trigger: TGCAGCACCGGTTTGGCTGGGATTATGCTGCTCAACTACCAGCAAGATTACACAGTATGGGTGCTGCCTCTGATCATCGTCTGCCTCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 ENSMUST00000107647.8 ENSMUST00000107651.9 |
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| CDS TCA 72 bp | CATGATCAGGAAGAGAATGACAGTGAACACTGTCGCTaGAATGGCATAGATGAGGAGCGCCCGCAGATTGTC | + |
|
Preference number: 6 (lower is better) Translates to: HDQEENDSEHCR*NGIDEERPQIV Trigger: GACAATCTGCGGGCGCTCCTCATCTATGCCATTTCAGCGACAGTGTTCACTGTCATTCTCTTCCTGATCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 ENSMUST00000107646.9 ENSMUST00000107647.8 ENSMUST00000107651.9 |
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| CDS GCA 72 bp | CCAAAGGCAGCAAATGCAGGATTTCAGCATGCATCGTaGACAAGCGTTTTCCTTCCCTTTGAGCTGACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: PKAANAGFQHAS*TSVFLPFELTV Trigger: CACAGTCAGCTCAAAGGGAAGGAAAACGCTTGTGCACGATGCATGCTGAAATCCTGCATTTGCTGCCTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 ENSMUST00000107646.9 ENSMUST00000107647.8 ENSMUST00000107651.9 |
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| CDS GCA 72 bp | CTTCCGGTGGGTGTGGTCCAGACCACTGTTCGGTATTaGTTCCAGTTTTGCATTTCTCTGCCCACAGATATT | + |
|
Preference number: 6 (lower is better) Translates to: LPVGVVQTTVRY*FQFCISLPTDI Trigger: AATATCTGTGGGCAGAGAAATGCAAAACTGGAAGCAATACCGAACAGTGGTCTGGACCACACCCACCGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102911.10 ENSMUST00000107646.9 ENSMUST00000107647.8 ENSMUST00000107651.9 |
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| CDS CAA 72 bp | GACGATGATCAGAGGCAGCACCCATACTGTGTAATCTaGCTGGTAGTTGAGCAGCATAATCCCAGCCAAACC | + |
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Preference number: 6 (lower is better) Translates to: DDDQRQHPYCVI*LVVEQHNPSQT Trigger: GGTTTGGCTGGGATTATGCTGCTCAACTACCAGCAAGATTACACAGTATGGGTGCTGCCTCTGATCATCGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 ENSMUST00000107647.8 ENSMUST00000107651.9 |
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| CDS GCA 72 bp | TGCTCAGGAATAACTGCTTCTTTGGGGGACCTTCTTTaGTTTGCATACAGCCACCATAATACACCCGTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: CSGITASLGDLL*FAYSHHNTPVP Trigger: TGGCACGGGTGTATTATGGTGGCTGTATGCAAAGCAAAGAAGGTCCCCCAAAGAAGCAGTTATTCCTGAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 ENSMUST00000107646.9 ENSMUST00000107647.8 ENSMUST00000107651.9 |
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| CDS CCA 72 bp | CATGGGTCCAAAAAGAACACATACTTCCGGTGGGTGTaGTCCAGACCACTGTTCGGTATTGCTTCCAGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: HGSKKNTYFRWV*SRPLFGIASSF Trigger: AAAACTGGAAGCAATACCGAACAGTGGTCTGGACCACACCCACCGGAAGTATGTGTTCTTTTTGGACCCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000102911.10 ENSMUST00000107646.9 ENSMUST00000107647.8 ENSMUST00000107651.9 |
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| CDS CAA 72 bp | TGTCGAGGACATGCTGCTACGCACAGTGCTATAGACTaGATCTTCCTGTTTATCAAGTCCAGGTTGCATGGG | + |
|
Preference number: 6 (lower is better) Translates to: CRGHAATHSAID*IFLFIKSRLHG Trigger: CCCATGCAACCTGGACTTGATAAACAGGAAGATCAAGTCTATAGCACTGTGCGTAGCAGCATGTCCTCGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102911.10 ENSMUST00000107646.9 ENSMUST00000107647.8 ENSMUST00000107651.9 |
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| CDS CAA 90 bp | ACGCACAGTGCTATAGACTTGATCTTCCTGTTTATCAAGTCCAGGTaGCATGGGTCCAAAAAGAACACATACTTCCGGTGGGTGTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: THSAIDLIFLFIKSR*HGSKKNTYFRWVWS Trigger: GGACCACACCCACCGGAAGTATGTGTTCTTTTTGGACCCATGCAACCTGGACTTGATAAACAGGAAGATCAAGTCTATAGCACTGTGCGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000102911.10 ENSMUST00000107646.9 ENSMUST00000107647.8 ENSMUST00000107651.9 |
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| CDS CAA 90 bp | TTCAACTCCTGTCGAGGACATGCTGCTACGCACAGTGCTATAGACTaGATCTTCCTGTTTATCAAGTCCAGGTTGCATGGGTCCAAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: FNSCRGHAATHSAID*IFLFIKSRLHGSKK Trigger: CTTTTTGGACCCATGCAACCTGGACTTGATAAACAGGAAGATCAAGTCTATAGCACTGTGCGTAGCAGCATGTCCTCGACAGGAGTTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000102911.10 ENSMUST00000107646.9 ENSMUST00000107647.8 ENSMUST00000107651.9 |
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| CDS TCA 72 bp | ACCATAATACACCCGTGCCACCAAGTGAACCCAGTATaGCCAGAACTGTTAGAATCCACACTAGCACTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TIIHPCHQVNPV*PELLESTLALL Trigger: CAAGAGTGCTAGTGTGGATTCTAACAGTTCTGGTCATACTGGGTTCACTTGGTGGCACGGGTGTATTATGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 ENSMUST00000107646.9 ENSMUST00000107647.8 ENSMUST00000107651.9 |
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| CDS GCA 72 bp | AGCTCAGGCACTTTTCAAGACACCAAAGGCAGCAAATaGAGGATTTCAGCATGCATCGTGCACAAGCGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SSGTFQDTKGSK*RISACIVHKRF Trigger: AAAACGCTTGTGCACGATGCATGCTGAAATCCTGCATTTGCTGCCTTTGGTGTCTTGAAAAGTGCCTGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 ENSMUST00000107646.9 ENSMUST00000107647.8 ENSMUST00000107651.9 |
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| CDS GCA 72 bp | AGAAGAGAACAAAGAGAAGCAGCCATGGTATGTCTGTaGAGCTACGGTCTTCCAATGGCTTCCATTCTCGTT | + |
|
Preference number: 6 (lower is better) Translates to: RREQREAAMVCL*SYGLPMASILV Trigger: AACGAGAATGGAAGCCATTGGAAGACCGTAGCTGCACAGACATACCATGGCTGCTTCTCTTTGTTCTCTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102911.10 ENSMUST00000107646.9 ENSMUST00000107647.8 ENSMUST00000107651.9 |
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| CDS GCA 72 bp | GTGGTCCAGACCACTGTTCGGTATTGCTTCCAGTTTTaGATTTCTCTGCCCACAGATATTTCCATAGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: VVQTTVRYCFQF*ISLPTDISIAV Trigger: GACAGCTATGGAAATATCTGTGGGCAGAGAAATGCAAAACTGGAAGCAATACCGAACAGTGGTCTGGACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102911.10 ENSMUST00000107646.9 ENSMUST00000107647.8 ENSMUST00000107651.9 |
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| CDS GCA 72 bp | GTTTTCTGGCTCTGCTCCAGGCTTTCAAAGGCTGCATaGAAACCTGGTTTAAGTAGCTCAGGCACTTTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: VFWLCSRLSKAA*KPGLSSSGTFQ Trigger: TTGAAAAGTGCCTGAGCTACTTAAACCAGGTTTGCATGCAGCCTTTGAAAGCCTGGAGCAGAGCCAGAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107646.9 |
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| CDS GCA 72 bp | ATTGTCCTCAGCTATCTGAAGCTGCTCAGGAATAACTaGTTCTTTGGGGGACCTTCTTTGCTTTGCATACAG | + |
|
Preference number: 6 (lower is better) Translates to: IVLSYLKLLRNN*FFGGPSLLCIQ Trigger: CTGTATGCAAAGCAAAGAAGGTCCCCCAAAGAAGCAGTTATTCCTGAGCAGCTTCAGATAGCTGAGGACAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 ENSMUST00000107646.9 ENSMUST00000107647.8 ENSMUST00000107651.9 |
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| CDS GCA 72 bp | TTTATCCCTAGTAAAGTAGTATGTTACCACAGCTCCTaGCACAGTCATCTGCTGACAGGCGAGAATGAACTC | + |
|
Preference number: 6 (lower is better) Translates to: FIPSKVVCYHSS*HSHLLTGENEL Trigger: GAGTTCATTCTCGCCTGTCAGCAGATGACTGTGGCAGGAGCTGTGGTAACATACTACTTTACTAGGGATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 ENSMUST00000107646.9 ENSMUST00000107647.8 ENSMUST00000107651.9 |
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| CDS GCA 72 bp | TTTCAACTCCTGTCGAGGACATGCTGCTACGCACAGTaGTATAGACTTGATCTTCCTGTTTATCAAGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: FQLLSRTCCYAQ*YRLDLPVYQVQ Trigger: CTGGACTTGATAAACAGGAAGATCAAGTCTATAGCACTGTGCGTAGCAGCATGTCCTCGACAGGAGTTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102911.10 ENSMUST00000107646.9 ENSMUST00000107647.8 ENSMUST00000107651.9 |
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| CDS CCA 72 bp | AGACTTGATCTTCCTGTTTATCAAGTCCAGGTTGCATaGGTCCAAAAAGAACACATACTTCCGGTGGGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: RLDLPVYQVQVA*VQKEHILPVGV Trigger: CACACCCACCGGAAGTATGTGTTCTTTTTGGACCCATGCAACCTGGACTTGATAAACAGGAAGATCAAGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000102911.10 ENSMUST00000107646.9 ENSMUST00000107647.8 ENSMUST00000107651.9 |
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| CDS CAA 72 bp | GTCATTACTCCACTAATCAGCCTGTGTAAGACACTATaGTCACTGACAAAGGTGATCAGGGCCTCTGCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: VITPLISLCKTL*SLTKVIRASAN Trigger: GTTTGCAGAGGCCCTGATCACCTTTGTCAGTGACAATAGTGTCTTACACAGGCTGATTAGTGGAGTAATGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102911.10 ENSMUST00000107646.9 ENSMUST00000107647.8 ENSMUST00000107651.9 |
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| CDS CAA 72 bp | AGATATTTCCATAGCTGTCGTATCCTGACACTAGTCTaGCTGCTGCACCTGTTGCTACTGAAAAGCCACAAA | + |
|
Preference number: 6 (lower is better) Translates to: RYFHSCRILTLV*LLHLLLLKSHK Trigger: TTTGTGGCTTTTCAGTAGCAACAGGTGCAGCAGCAAGACTAGTGTCAGGATACGACAGCTATGGAAATATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102911.10 ENSMUST00000107646.9 ENSMUST00000107647.8 ENSMUST00000107651.9 |
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| CDS CCA 72 bp | AACACAAGAACAATACATCCACTACCATTTCGTAAATaGACAGGAAGCAATGAGCGACTAGGAAAGCAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: NTRTIHPLPFRK*TGSNERLGKQR Trigger: TCTTTGCTTTCCTAGTCGCTCATTGCTTCCTGTCCATTTACGAAATGGTAGTGGATGTATTGTTCTTGTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 ENSMUST00000107647.8 ENSMUST00000107651.9 |
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| CDS CAA 90 bp | CTTTGTCCATATAGAATTCTCGGCCAGGGCTCCCATCATTGTATTTaGTATCAATGGCAAAACACAAGAACAATACATCCACTACCATTT | + |
|
Preference number: 6 (lower is better) Translates to: LCPYRILGQGSHHCI*YQWQNTRTIHPLPF Trigger: AAATGGTAGTGGATGTATTGTTCTTGTGTTTTGCCATTGATACAAAATACAATGATGGGAGCCCTGGCCGAGAATTCTATATGGACAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102911.10 ENSMUST00000107645.2 ENSMUST00000107647.8 ENSMUST00000107651.9 |
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| CDS CAA 90 bp | ATGGACAGAACTAGTGATAACAAGCAAAGTCCCAATATAATTTCTTaGCTGGTCATTACTCCACTAATCAGCCTGTGTAAGACACTATTG | + |
|
Preference number: 6 (lower is better) Translates to: MDRTSDNKQSPNIIS*LVITPLISLCKTLL Trigger: CAATAGTGTCTTACACAGGCTGATTAGTGGAGTAATGACCAGCAAAGAAATTATATTGGGACTTTGCTTGTTATCACTAGTTCTGTCCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102911.10 ENSMUST00000107646.9 ENSMUST00000107647.8 ENSMUST00000107651.9 |
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