Pregenerated sensors for SLC43A3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027074Ensembl transcript IDs: ENSMUST00000090726.6, ENSMUST00000138719.8, ENSMUST00000141650.8
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAAAACTCATCTAAATCTTTGCTTTGGGTTGGTGTGAAGGCTGCTTaGCCACTGAAATTTCCACTCATCTTGGAAATCAAAAGTCCTAGG | + |
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Preference number: 1 (lower is better) Translates to: KNSSKSLLWVGVKAA*PLKFPLILEIKSPR Trigger: CCTAGGACTTTTGATTTCCAAGATGAGTGGAAATTTCAGTGGCCAAGCAGCCTTCACACCAACCCAAAGCAAAGATTTAGATGAGTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| 3UTR-3UTR TCA 90 bp | TGCAGTATCCATGGAGGGACTGCAGTTACAGTTTGTGAGCCACTATGTGGGTGCCCCTGTCCCTTGCAATaGGCTCTGCTGTGGCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: CSIHGGTAVTVCEPLCGCPCPLQ*ALLWPC Trigger: ACAGGGCCACAGCAGAGCTCATTGCAAGGGACAGGG...GCACCCACATAGTGGCTCACAAACTGTAACTGCAGTCCCTCCATGGATACTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| 3UTR-3UTR GCA 90 bp | TGCAGTATCCATGGAGGGACTGCAGTTACAGTTTGTGAGCCACTATGTGGGTGCTATCTCCCTGTCCCTTaGAATGAGCTCTGCTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: CSIHGGTAVTVCEPLCGCYLPVP*NELCCG Trigger: GCCACAGCAGAGCTCATTGCAAGGGACAGGGAGATA...GCACCCACATAGTGGCTCACAAACTGTAACTGCAGTCCCTCCATGGATACTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| 3UTR CAA 90 bp | TGCTGTGGCCCTGTGCAGGGAGTAACTAAAAACTCATCTAAATCTTaGCTTTGGGTTGGTGTGAAGGCTGCTTGGCCACTGAAATTTCCA | + |
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Preference number: 2 (lower is better) Translates to: CCGPVQGVTKNSSKS*LWVGVKAAWPLKFP Trigger: TGGAAATTTCAGTGGCCAAGCAGCCTTCACACCAACCCAAAGCAAAGATTTAGATGAGTTTTTAGTTACTCCCTGCACAGGGCCACAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| 3UTR-3UTR TCA 90 bp | TCCATGGAGGGACTGCAGTTACAGTTTGTGAGCCACTATGTGGGTGCTAAAAATGCTGCCCTAAGTCAATaGATAGCCCTTTTCCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: SMEGLQLQFVSHYVGAKNAALSQ*IALFLK Trigger: CTTCAGGAAAAGGGCTATTCATTGACTTAGGGCAGC...ATTTTTAGCACCCACATAGTGGCTCACAAACTGTAACTGCAGTCCCTCCATGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| 3UTR-3UTR CCA 90 bp | GCAGTATCCATGGAGGGACTGCAGTTACAGTTTGTGAGCCACTATGTGGGTGCTGTTTGTTTCTTGTGGTaGCAGTGGTTTAAGAAAAAC | + |
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Preference number: 2 (lower is better) Translates to: AVSMEGLQLQFVSHYVGAVCFLW*QWFKKN Trigger: GTTTTTCTTAAACCACTGCCACCACAAGAAACAAAC...AGCACCCACATAGTGGCTCACAAACTGTAACTGCAGTCCCTCCATGGATACTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| 3UTR-3UTR CCA 90 bp | TCACAGGCAAGATACAAAGTGTTGTCCAAAATCTTTCTGGCTAGCCAGTCAGTTGGTGTGAAGGCTGCTTaGCCACTGAAATTTCCACTC | + |
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Preference number: 2 (lower is better) Translates to: SQARYKVLSKIFLASQSVGVKAA*PLKFPL Trigger: GAGTGGAAATTTCAGTGGCCAAGCAGCCTTCACACC...AACTGACTGGCTAGCCAGAAAGATTTTGGACAACACTTTGTATCTTGCCTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| 3UTR CAA 90 bp | AGCTGCCCTAAGTCAATGAATAGCCCTTTTCCTGAAGAGGAGACATaGCTCACAGGCAAGATACAAAGTGTTGTCCAAAATCTTTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: SCPKSMNSPFPEEET*LTGKIQSVVQNLSG Trigger: GCCAGAAAGATTTTGGACAACACTTTGTATCTTGCCTGTGAGCAATGTCTCCTCTTCAGGAAAAGGGCTATTCATTGACTTAGGGCAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| 3UTR-3UTR CCA 90 bp | TCCATGGAGGGACTGCAGTTACAGTTTGTGAGCCACTATGTGGGTGCTAAAAATTCTAAATCTTTGCTTTaGGTTGGTGTGAAGGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: SMEGLQLQFVSHYVGAKNSKSLL*VGVKAA Trigger: AGCAGCCTTCACACCAACCCAAAGCAAAGATTTAGA...ATTTTTAGCACCCACATAGTGGCTCACAAACTGTAACTGCAGTCCCTCCATGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| 3UTR-3UTR TCA 90 bp | TCCATGGAGGGACTGCAGTTACAGTTTGTGAGCCACTATGTGGGTGCTAAAAATATCAAAAGTCCTAGGTaGCATTTGAGTGCCTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: SMEGLQLQFVSHYVGAKNIKSPR*HLSALF Trigger: AAACAAGGCACTCAAATGTCACCTAGGACTTTTGAT...ATTTTTAGCACCCACATAGTGGCTCACAAACTGTAACTGCAGTCCCTCCATGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| 3UTR-3UTR CCA 90 bp | TCACAGGCAAGATACAAAGTGTTGTCCAAAATCTTTCTGGCTAGCCAGTCAGTTTTCTTGTGGTGGCAGTaGTTTAAGAAAAACTATGAC | + |
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Preference number: 2 (lower is better) Translates to: SQARYKVLSKIFLASQSVFLWWQ*FKKNYD Trigger: GTCATAGTTTTTCTTAAACCACTGCCACCACAAGAA...AACTGACTGGCTAGCCAGAAAGATTTTGGACAACACTTTGTATCTTGCCTGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| 3UTR-3UTR CCA 90 bp | CATCTCTCCAACCCCAAGCTAATTATATATAAAAGCTGCCCTAAGTCAATGAATTTGGTTTGTTTCTTGTaGTGGCAGTGGTTTAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: HLSNPKLIIYKSCPKSMNLVCFL*WQWFKK Trigger: TTTCTTAAACCACTGCCACCACAAGAAACAAACCAA...ATTCATTGACTTAGGGCAGCTTTTATATATAATTAGCTTGGGGTTGGAGAGATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| 3UTR TCA 72 bp | GTTGGATCCCAAGTCCTTTGGGGTAGCATGACTCTGTaGCATATCTCCCTGTCCCTTGCAATGAGCTCTGCT | + |
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Preference number: 3 (lower is better) Translates to: VGSQVLWGSMTL*HISLSLAMSSA Trigger: AGCAGAGCTCATTGCAAGGGACAGGGAGATATGTCACAGAGTCATGCTACCCCAAAGGACTTGGGATCCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| 3UTR GCA 72 bp | TCTGTGACATATCTCCCTGTCCCTTGCAATGAGCTCTaGTGTGGCCCTGTGCAGGGAGTAACTAAAAACTCA | + |
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Preference number: 3 (lower is better) Translates to: SVTYLPVPCNEL*CGPVQGVTKNS Trigger: TGAGTTTTTAGTTACTCCCTGCACAGGGCCACAGCAGAGCTCATTGCAAGGGACAGGGAGATATGTCACAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| 3UTR CCA 72 bp | CACAGGCAAGATACAAAGTGTTGTCCAAAATCTTTCTaGCTAGCCAGTCAGTTGGATCCCAAGTCCTTTGGG | + |
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Preference number: 3 (lower is better) Translates to: HRQDTKCCPKSF*LASQLDPKSFG Trigger: CCCAAAGGACTTGGGATCCAACTGACTGGCTAGCCAGAAAGATTTTGGACAACACTTTGTATCTTGCCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| 3UTR GCA 72 bp | TTCTTGTGGTGGCAGTGGTTTAAGAAAAACTATGACTaGCGATTACAGTTCTCCTGGGGAGGCAGTCTTTGT | + |
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Preference number: 3 (lower is better) Translates to: FLWWQWFKKNYD*RLQFSWGGSLC Trigger: ACAAAGACTGCCTCCCCAGGAGAACTGTAATCGGCAGTCATAGTTTTTCTTAAACCACTGCCACCACAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| 3UTR-3UTR CAA 90 bp | GAGGAGACATTGCTCACAGGCAAGATACAAAGTGTTGTCCAAAATCTTTCTGGCAACTCATCTAAATCTTaGCTTTGGGTTGGTGTGAAG | + |
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Preference number: 3 (lower is better) Translates to: EETLLTGKIQSVVQNLSGNSSKS*LWVGVK Trigger: CTTCACACCAACCCAAAGCAAAGATTTAGATGAGTT...GCCAGAAAGATTTTGGACAACACTTTGTATCTTGCCTGTGAGCAATGTCTCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| 3UTR CCA 72 bp | TTTAAGAAAAACTATGACTGCCGATTACAGTTCTCCTaGGGAGGCAGTCTTTGTAGATACTGGATCATCAAA | + |
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Preference number: 3 (lower is better) Translates to: FKKNYDCRLQFS*GGSLCRYWIIK Trigger: TTTGATGATCCAGTATCTACAAAGACTGCCTCCCCAGGAGAACTGTAATCGGCAGTCATAGTTTTTCTTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| CDS-3UTR GCA 90 bp | GCAGTATCCATGGAGGGACTGCAGTTACAGTTTGTGAGCCACTATGTGGGTGCTTGCTGCTGCTCCTGCTaGTGCTGCTGTTCTGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: AVSMEGLQLQFVSHYVGACCCSC*CCCSGP Trigger: TGGACCAGAACAGCAGCAGCAGCAGGAGCAGCAGCA...AGCACCCACATAGTGGCTCACAAACTGTAACTGCAGTCCCTCCATGGATACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| CDS-3UTR CCA 90 bp | TGCAGTATCCATGGAGGGACTGCAGTTACAGTTTGTGAGCCACTATGTGGGTGCCTCCCACTGCGAGCATaGGCATGGCTAGGAAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: CSIHGGTAVTVCEPLCGCLPLRA*AWLGRA Trigger: TGCTCTTCCTAGCCATGCCCATGCTCGCAGTGGGAG...GCACCCACATAGTGGCTCACAAACTGTAACTGCAGTCCCTCCATGGATACTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| CDS-3UTR GCA 90 bp | GCAGTATCCATGGAGGGACTGCAGTTACAGTTTGTGAGCCACTATGTGGGTGCTTGCTCCTGCTGCTGCTaGTGTTCTGGTCCAGAGTTC | + |
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Preference number: 4 (lower is better) Translates to: AVSMEGLQLQFVSHYVGACSCCC*CSGPEF Trigger: GAACTCTGGACCAGAACAGCAGCAGCAGCAGGAGCA...AGCACCCACATAGTGGCTCACAAACTGTAACTGCAGTCCCTCCATGGATACTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| CDS-3UTR GCA 90 bp | CTTTGGGTTGGTGTGAAGGCTGCTTGGCCACTGAAATTTCCACTCATCTTGGAATGCTGCTCCTGCTGCTaGTGCTGTTCTGGTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LWVGVKAAWPLKFPLILECCSCC*CCSGPE Trigger: CTCTGGACCAGAACAGCAGCAGCAGCAGGAGCAGCA...TTCCAAGATGAGTGGAAATTTCAGTGGCCAAGCAGCCTTCACACCAACCCAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| CDS-3UTR TCA 90 bp | TGCAGTATCCATGGAGGGACTGCAGTTACAGTTTGTGAGCCACTATGTGGGTGCCGCCAAAGAACTGGGTaGTGGCAAAGGCATTTGTGT | + |
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Preference number: 4 (lower is better) Translates to: CSIHGGTAVTVCEPLCGCRQRTG*WQRHLC Trigger: ACACAAATGCCTTTGCCATCACCCAGTTCTTTGGCG...GCACCCACATAGTGGCTCACAAACTGTAACTGCAGTCCCTCCATGGATACTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| CDS-3UTR TCA 90 bp | CTTTGGGTTGGTGTGAAGGCTGCTTGGCCACTGAAATTTCCACTCATCTTGGAAAGGGAAATGCCAGCGTaGGGAAGGCAGCATTGCATC | + |
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Preference number: 4 (lower is better) Translates to: LWVGVKAAWPLKFPLILEREMPA*GRQHCI Trigger: GATGCAATGCTGCCTTCCTCACGCTGGCATTTCCCT...TTCCAAGATGAGTGGAAATTTCAGTGGCCAAGCAGCCTTCACACCAACCCAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| CDS-3UTR GCA 90 bp | GCAAGATACAAAGTGTTGTCCAAAATCTTTCTGGCTAGCCAGTCAGTTGGATCCGAGTGTTGCTCGTGTTaGTCCTGCTGCTGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: ARYKVLSKIFLASQSVGSECCSC*SCCCCC Trigger: GCAGCAGCAGCAGCAGGAGCAACACGAGCAACACTC...GGATCCAACTGACTGGCTAGCCAGAAAGATTTTGGACAACACTTTGTATCTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| CDS-3UTR GCA 90 bp | GAGGAGACATTGCTCACAGGCAAGATACAAAGTGTTGTCCAAAATCTTTCTGGCGAGCGGCTGACCACTTaGAGGATGAAGGTGGCGTAC | + |
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Preference number: 4 (lower is better) Translates to: EETLLTGKIQSVVQNLSGERLTT*RMKVAY Trigger: GTACGCCACCTTCATCCTGCAAGTGGTCAGCCGCTC...GCCAGAAAGATTTTGGACAACACTTTGTATCTTGCCTGTGAGCAATGTCTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| CDS-3UTR CCA 90 bp | GCAAGATACAAAGTGTTGTCCAAAATCTTTCTGGCTAGCCAGTCAGTTGGATCCCTGCGAGCATGGGCATaGCTAGGAAGAGCAGCATGG | + |
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Preference number: 4 (lower is better) Translates to: ARYKVLSKIFLASQSVGSLRAWA*LGRAAW Trigger: CCATGCTGCTCTTCCTAGCCATGCCCATGCTCGCAG...GGATCCAACTGACTGGCTAGCCAGAAAGATTTTGGACAACACTTTGTATCTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| CDS-3UTR TCA 90 bp | GCAAGATACAAAGTGTTGTCCAAAATCTTTCTGGCTAGCCAGTCAGTTGGATCCGACGAGGAACACTGCTaGGGAGGAGTCAAATGCTCC | + |
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Preference number: 4 (lower is better) Translates to: ARYKVLSKIFLASQSVGSDEEHC*GGVKCS Trigger: GGAGCATTTGACTCCTCCTCAGCAGTGTTCCTCGTC...GGATCCAACTGACTGGCTAGCCAGAAAGATTTTGGACAACACTTTGTATCTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| CDS-3UTR TCA 90 bp | TCCATGGAGGGACTGCAGTTACAGTTTGTGAGCCACTATGTGGGTGCTAAAAATCGTACTGTAGCTGCATaGCAGGAATGGAGGCACACA | + |
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Preference number: 4 (lower is better) Translates to: SMEGLQLQFVSHYVGAKNRTVAA*QEWRHT Trigger: TGTGTGCCTCCATTCCTGTCATGCAGCTACAGTACG...ATTTTTAGCACCCACATAGTGGCTCACAAACTGTAACTGCAGTCCCTCCATGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| CDS-3UTR TCA 90 bp | GCAAGATACAAAGTGTTGTCCAAAATCTTTCTGGCTAGCCAGTCAGTTGGATCCCAGAGACACAATAGCTaGCAAGGCCATCACCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: ARYKVLSKIFLASQSVGSQRHNS*QGHHQP Trigger: GGGCTGGTGATGGCCTTGTCAGCTATTGTGTCTCTG...GGATCCAACTGACTGGCTAGCCAGAAAGATTTTGGACAACACTTTGTATCTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| CDS-3UTR CCA 90 bp | TCTTGTGGTGGCAGTGGTTTAAGAAAAACTATGACTGCCGATTACAGTTCTCCTCCAGTGAAGGCACCATaGAGCAGAGAGCCACAGCCT | + |
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Preference number: 4 (lower is better) Translates to: SCGGSGLRKTMTADYSSPPVKAP*SREPQP Trigger: AGGCTGTGGCTCTCTGCTCCATGGTGCCTTCACTGG...AGGAGAACTGTAATCGGCAGTCATAGTTTTTCTTAAACCACTGCCACCACAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| CDS-3UTR CCA 90 bp | CCTCTGGAAGAGCAGCCAGTGCTCTTAAGAGTTAAGCCATCTCTCCAACCCCAATACACCAGGAAGGGATaGACCAATGTCAGGAAAATG | + |
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Preference number: 4 (lower is better) Translates to: PLEEQPVLLRVKPSLQPQYTRKG*TNVRKM Trigger: CATTTTCCTGACATTGGTCCATCCCTTCCTGGTGTA...TTGGGGTTGGAGAGATGGCTTAACTCTTAAGAGCACTGGCTGCTCTTCCAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| CDS-3UTR TCA 90 bp | TCCATGGAGGGACTGCAGTTACAGTTTGTGAGCCACTATGTGGGTGCTAAAAATCATTTGTGTAGGCACTaGCTTCCACTTTGTCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: SMEGLQLQFVSHYVGAKNHLCRH*LPLCPH Trigger: GTGGGGACAAAGTGGAAGTCAGTGCCTACACAAATG...ATTTTTAGCACCCACATAGTGGCTCACAAACTGTAACTGCAGTCCCTCCATGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| CDS-3UTR GCA 90 bp | CCTCTGGAAGAGCAGCCAGTGCTCTTAAGAGTTAAGCCATCTCTCCAACCCCAAACCTGTCCTTTTGGCTaGCTTCTGATACTTCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: PLEEQPVLLRVKPSLQPQTCPFG*LLILLF Trigger: AAACAGAAGTATCAGAAGGCAGCCAAAAGGACAGGT...TTGGGGTTGGAGAGATGGCTTAACTCTTAAGAGCACTGGCTGCTCTTCCAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| CDS-3UTR CCA 90 bp | GAGGAGACATTGCTCACAGGCAAGATACAAAGTGTTGTCCAAAATCTTTCTGGCGTAGTTGGGAGGCAGTaGGTAGGGGATATGTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: EETLLTGKIQSVVQNLSGVVGRQ*VGDMSL Trigger: AAGGGACATATCCCCTACCCACTGCCTCCCAACTAC...GCCAGAAAGATTTTGGACAACACTTTGTATCTTGCCTGTGAGCAATGTCTCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| CDS-3UTR TCA 90 bp | GAGGAGACATTGCTCACAGGCAAGATACAAAGTGTTGTCCAAAATCTTTCTGGCCAGGGTAAAGATGAGTaGGAACTTCTCATCCTGCGC | + |
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Preference number: 4 (lower is better) Translates to: EETLLTGKIQSVVQNLSGQGKDE*ELLILR Trigger: GCGCAGGATGAGAAGTTCTCACTCATCTTTACCCTG...GCCAGAAAGATTTTGGACAACACTTTGTATCTTGCCTGTGAGCAATGTCTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| CDS-3UTR CCA 90 bp | AAGAGGAGACATTGCTCACAGGCAAGATACAAAGTGTTGTCCAAAATCTTTCTGAGCCATAGCTGTAGTTaGGAGGCAGTGGGTAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: KRRHCSQARYKVLSKIFLSHSCS*EAVGRG Trigger: TCCCCTACCCACTGCCTCCCAACTACAGCTATGGCT...CAGAAAGATTTTGGACAACACTTTGTATCTTGCCTGTGAGCAATGTCTCCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| 3UTR CAA 72 bp | CCTGTGCAGGGAGTAACTAAAAACTCATCTAAATCTTaGCTTTGGGTTGGTGTGAAGGCTGCTTGGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: PVQGVTKNSSKS*LWVGVKAAWPL Trigger: CAGTGGCCAAGCAGCCTTCACACCAACCCAAAGCAAAGATTTAGATGAGTTTTTAGTTACTCCCTGCACAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| CDS-3UTR CCA 90 bp | GCAAGATACAAAGTGTTGTCCAAAATCTTTCTGGCTAGCCAGTCAGTTGGATCCCCTGTTACATTGCTCTaGAGCAAGCAGTCCTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: ARYKVLSKIFLASQSVGSPVTLL*SKQSCS Trigger: TGAACAGGACTGCTTGCTCCAGAGCAATGTAACAGG...GGATCCAACTGACTGGCTAGCCAGAAAGATTTTGGACAACACTTTGTATCTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| CDS-3UTR CCA 90 bp | GAGGAGACATTGCTCACAGGCAAGATACAAAGTGTTGTCCAAAATCTTTCTGGCCAGAGTTCTCTTCCTTaGGTGGCAGACATTCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: EETLLTGKIQSVVQNLSGQSSLP*VADIPL Trigger: CAAAGGAATGTCTGCCACCCAAGGAAGAGAACTCTG...GCCAGAAAGATTTTGGACAACACTTTGTATCTTGCCTGTGAGCAATGTCTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| 3UTR CAA 72 bp | AAGAGGAGACATTGCTCACAGGCAAGATACAAAGTGTaGTCCAAAATCTTTCTGGCTAGCCAGTCAGTTGGA | + |
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Preference number: 4 (lower is better) Translates to: KRRHCSQARYKV*SKIFLASQSVG Trigger: TCCAACTGACTGGCTAGCCAGAAAGATTTTGGACAACACTTTGTATCTTGCCTGTGAGCAATGTCTCCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| CDS-3UTR TCA 90 bp | AAGAGGAGACATTGCTCACAGGCAAGATACAAAGTGTTGTCCAAAATCTTTCTGGAACACAAACAACAGTaGAGTCCAGCCAAAGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: KRRHCSQARYKVLSKIFLEHKQQ*SPAKED Trigger: GTCCTCTTTGGCTGGACTTCACTGTTGTTTGTGTTC...CAGAAAGATTTTGGACAACACTTTGTATCTTGCCTGTGAGCAATGTCTCCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| CDS-3UTR TCA 90 bp | AAGAGGAGACATTGCTCACAGGCAAGATACAAAGTGTTGTCCAAAATCTTTCTGCTTTTGGCTGCCTTCTaGTACTTCTGTTTAAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: KRRHCSQARYKVLSKIFLLLAAF*YFCLRR Trigger: CCGCCTTAAACAGAAGTATCAGAAGGCAGCCAAAAG...CAGAAAGATTTTGGACAACACTTTGTATCTTGCCTGTGAGCAATGTCTCCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| CDS-3UTR CCA 90 bp | AAGAGGAGACATTGCTCACAGGCAAGATACAAAGTGTTGTCCAAAATCTTTCTGAGCACGCCAAAGAACTaGGTGATGGCAAAGGCATTT | + |
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Preference number: 4 (lower is better) Translates to: KRRHCSQARYKVLSKIFLSTPKN*VMAKAF Trigger: AAATGCCTTTGCCATCACCCAGTTCTTTGGCGTGCT...CAGAAAGATTTTGGACAACACTTTGTATCTTGCCTGTGAGCAATGTCTCCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| CDS-3UTR GCA 90 bp | CATCTCTCCAACCCCAAGCTAATTATATATAAAAGCTGCCCTAAGTCAATGAATAAAGTACGCGCAATGTaGCAGACACTGCAGACAGAC | + |
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Preference number: 4 (lower is better) Translates to: HLSNPKLIIYKSCPKSMNKVRAM*QTLQTD Trigger: GTCTGTCTGCAGTGTCTGGCACATTGCGCGTACTTT...ATTCATTGACTTAGGGCAGCTTTTATATATAATTAGCTTGGGGTTGGAGAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| CDS-3UTR TCA 90 bp | GTGCAGGGAGTAACTAAAAACTCATCTAAATCTTTGCTTTGGGTTGGTGTGAAGCTGTTCACAGGGCTCTaGAAAGTAGTTTTCTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: VQGVTKNSSKSLLWVGVKLFTGL*KVVFCF Trigger: AAAGCAGAAAACTACTTTTCAGAGCCCTGTGAACAG...CTTCACACCAACCCAAAGCAAAGATTTAGATGAGTTTTTAGTTACTCCCTGCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| CDS-3UTR GCA 90 bp | AAGAGGAGACATTGCTCACAGGCAAGATACAAAGTGTTGTCCAAAATCTTTCTGGGTTTCGTGTTCAGCTaGTTTATTCTCTTTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KRRHCSQARYKVLSKIFLGFVFS*FILFLA Trigger: AGCAAGAAAGAGAATAAAGCAGCTGAACACGAAACC...CAGAAAGATTTTGGACAACACTTTGTATCTTGCCTGTGAGCAATGTCTCCTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS-3UTR GCA 90 bp | CATCTCTCCAACCCCAAGCTAATTATATATAAAAGCTGCCCTAAGTCAATGAATAAGAGCTTTCCAAAATaGTCTGAGGGAAATGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HLSNPKLIIYKSCPKSMNKSFPK*SEGNAS Trigger: GCTGGCATTTCCCTCAGAGCATTTTGGAAAGCTCTT...ATTCATTGACTTAGGGCAGCTTTTATATATAATTAGCTTGGGGTTGGAGAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS-3UTR CCA 90 bp | CATCTCTCCAACCCCAAGCTAATTATATATAAAAGCTGCCCTAAGTCAATGAATAGGAACCTGTCCTTTTaGCTGCCTTCTGATACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HLSNPKLIIYKSCPKSMNRNLSF*LPSDTS Trigger: AGAAGTATCAGAAGGCAGCCAAAAGGACAGGTTCCT...ATTCATTGACTTAGGGCAGCTTTTATATATAATTAGCTTGGGGTTGGAGAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS-3UTR CCA 90 bp | CATCTCTCCAACCCCAAGCTAATTATATATAAAAGCTGCCCTAAGTCAATGAATCCAATGTCAGGAAAATaGCAAGCCCCATCGATACAT | + |
|
Preference number: 4 (lower is better) Translates to: HLSNPKLIIYKSCPKSMNPMSGK*QAPSIH Trigger: ATGTATCGATGGGGCTTGCCATTTTCCTGACATTGG...ATTCATTGACTTAGGGCAGCTTTTATATATAATTAGCTTGGGGTTGGAGAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| 3UTR CAA 72 bp | AAGTCAATGAATAGCCCTTTTCCTGAAGAGGAGACATaGCTCACAGGCAAGATACAAAGTGTTGTCCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KSMNSPFPEEET*LTGKIQSVVQN Trigger: ATTTTGGACAACACTTTGTATCTTGCCTGTGAGCAATGTCTCCTCTTCAGGAAAAGGGCTATTCATTGACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS-3UTR GCA 90 bp | CATCTCTCCAACCCCAAGCTAATTATATATAAAAGCTGCCCTAAGTCAATGAATGAGAACTTCTCATCCTaGGCTTTTAAATCAGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HLSNPKLIIYKSCPKSMNENFSS*AFKSEG Trigger: GCCTTCTGATTTAAAAGCGCAGGATGAGAAGTTCTC...ATTCATTGACTTAGGGCAGCTTTTATATATAATTAGCTTGGGGTTGGAGAGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS TCA 90 bp | GGCACACAGGGCAAAGCCCAGGGACAGCAGAGACGTCAGAGCCAGTaGAGGCACCATGGAGCAGAGAGCCACAGCCTCAGACGAGGAACC | + |
|
Preference number: 5 (lower is better) Translates to: GTQGKAQGQQRRQSQ*RHHGAESHSLRRGT Trigger: GGTTCCTCGTCTGAGGCTGTGGCTCTCTGCTCCATGGTGCCTTCACTGGCTCTGACGTCTCTGCTGTCCCTGGGCTTTGCCCTGTGTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS GCA 90 bp | CGAGAGAGCGCGCAGCGTCGAAAAGAGTGTTGCTCGTGTTGCTCCTaGTGCTGCTGCTGCTGCTGCTGCTGCTCCTGCTGCTGCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RESAQRRKECCSCCS*CCCCCCCCSCCCCC Trigger: ACAGCAGCAGCAGCAGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGCAACACGAGCAACACTCTTTTCGACGCTGCGCGCTCTCTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS GCA 90 bp | GCGCAGCGTCGAAAAGAGTGTTGCTCGTGTTGCTCCTGCTGCTGCTaGTGCTGCTGCTGCTGCTCCTGCTGCTGCTGCTGTTCTGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: AQRRKECCSCCSCCC*CCCCCSCCCCCSGP Trigger: TGGACCAGAACAGCAGCAGCAGCAGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGCAACACGAGCAACACTCTTTTCGACGCTGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS GCA 90 bp | AGCGCGCAGCGTCGAAAAGAGTGTTGCTCGTGTTGCTCCTGCTGCTaGTGCTGCTGCTGCTGCTGCTCCTGCTGCTGCTGCTGTTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SAQRRKECCSCCSCC*CCCCCCSCCCCCSG Trigger: ACCAGAACAGCAGCAGCAGCAGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGCAACACGAGCAACACTCTTTTCGACGCTGCGCGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS GCA 90 bp | GAGAGCGCGCAGCGTCGAAAAGAGTGTTGCTCGTGTTGCTCCTGCTaGTGCTGCTGCTGCTGCTGCTGCTCCTGCTGCTGCTGCTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ESAQRRKECCSCCSC*CCCCCCCSCCCCCS Trigger: AGAACAGCAGCAGCAGCAGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGCAACACGAGCAACACTCTTTTCGACGCTGCGCGCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS GCA 90 bp | TGCTCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTCCTGCTGCTGCTaGTGTTCTGGTCCAGAGTTCTCTTCCTTGGGTGGCAGACATTCC | + |
|
Preference number: 5 (lower is better) Translates to: CSCCCCCCCCCSCCC*CSGPEFSSLGGRHS Trigger: GGAATGTCTGCCACCCAAGGAAGAGAACTCTGGACCAGAACAGCAGCAGCAGCAGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS GCA 90 bp | CAGCGTCGAAAAGAGTGTTGCTCGTGTTGCTCCTGCTGCTGCTGCTaGTGCTGCTGCTGCTCCTGCTGCTGCTGCTGTTCTGGTCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QRRKECCSCCSCCCC*CCCCSCCCCCSGPE Trigger: CTCTGGACCAGAACAGCAGCAGCAGCAGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGCAACACGAGCAACACTCTTTTCGACGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS GCA 90 bp | GAGTGTTGCTCGTGTTGCTCCTGCTGCTGCTGCTGCTGCTGCTGCTaGTCCTGCTGCTGCTGCTGTTCTGGTCCAGAGTTCTCTTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ECCSCCSCCCCCCCC*SCCCCCSGPEFSSL Trigger: CAAGGAAGAGAACTCTGGACCAGAACAGCAGCAGCAGCAGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGCAACACGAGCAACACTC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS GCA 90 bp | CGTCGAAAAGAGTGTTGCTCGTGTTGCTCCTGCTGCTGCTGCTGCTaGTGCTGCTGCTCCTGCTGCTGCTGCTGTTCTGGTCCAGAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RRKECCSCCSCCCCC*CCCSCCCCCSGPEF Trigger: GAACTCTGGACCAGAACAGCAGCAGCAGCAGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGCAACACGAGCAACACTCTTTTCGACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS GCA 90 bp | AAGGAGCGGCTGACCACTTGCAGGATGAAGGTGGCGTACTGTAGCTaGATGACAGGAATGGAGGCACACAGGGCAAAGCCCAGGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: KERLTTCRMKVAYCS*MTGMEAHRAKPRDS Trigger: GCTGTCCCTGGGCTTTGCCCTGTGTGCCTCCATTCCTGTCATGCAGCTACAGTACGCCACCTTCATCCTGCAAGTGGTCAGCCGCTCCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS GCA 90 bp | AAAGAGTGTTGCTCGTGTTGCTCCTGCTGCTGCTGCTGCTGCTGCTaGTGCTCCTGCTGCTGCTGCTGTTCTGGTCCAGAGTTCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KECCSCCSCCCCCCC*CSCCCCCSGPEFSS Trigger: GGAAGAGAACTCTGGACCAGAACAGCAGCAGCAGCAGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGCAACACGAGCAACACTCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS GCA 90 bp | CGAAAAGAGTGTTGCTCGTGTTGCTCCTGCTGCTGCTGCTGCTGCTaGTGCTGCTCCTGCTGCTGCTGCTGTTCTGGTCCAGAGTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RKECCSCCSCCCCCC*CCSCCCCCSGPEFS Trigger: AGAGAACTCTGGACCAGAACAGCAGCAGCAGCAGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGCAACACGAGCAACACTCTTTTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS CCA 90 bp | AGCACCAAACCTGGAGCACAAGCCATAGCTGTAGTTGGGAGGCAGTaGGTAGGGGATATGTCCCTTGGGCATCAGAAGGAAAGTACGCGC | + |
|
Preference number: 5 (lower is better) Translates to: STKPGAQAIAVVGRQ*VGDMSLGHQKESTR Trigger: GCGCGTACTTTCCTTCTGATGCCCAAGGGACATATCCCCTACCCACTGCCTCCCAACTACAGCTATGGCTTGTGCTCCAGGTTTGGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS CCA 90 bp | GCTGCTCCTGCTGCTGCTGCTGTTCTGGTCCAGAGTTCTCTTCCTTaGGTGGCAGACATTCCTTTGACCGCAGCTCCTTGGTTTCGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: AAPAAAAVLVQSSLP*VADIPLTAAPWFRV Trigger: AACACGAAACCAAGGAGCTGCGGTCAAAGGAATGTCTGCCACCCAAGGAAGAGAACTCTGGACCAGAACAGCAGCAGCAGCAGGAGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS GCA 90 bp | AGGAAGGCAGCATTGCATCCATACAGGAAGGAGCGGCTGACCACTTaGAGGATGAAGGTGGCGTACTGTAGCTGCATGACAGGAATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RKAALHPYRKERLTT*RMKVAYCSCMTGME Trigger: CTCCATTCCTGTCATGCAGCTACAGTACGCCACCTTCATCCTGCAAGTGGTCAGCCGCTCCTTCCTGTATGGATGCAATGCTGCCTTCCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS TCA 90 bp | AGAGCCACAGCCTCAGACGAGGAACCTGTCCTTTTGGCTGCCTTCTaGTACTTCTGTTTAAGGCGGTCCATGAGTAAGCCATTCCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RATASDEEPVLLAAF*YFCLRRSMSKPFQG Trigger: CCCCTGGAATGGCTTACTCATGGACCGCCTTAAACAGAAGTATCAGAAGGCAGCCAAAAGGACAGGTTCCTCGTCTGAGGCTGTGGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS-3UTR CAA 90 bp | GGCAGTGGTTTAAGAAAAACTATGACTGCCGATTACAGTTCTCCTGGGGAGGCAGAAGGCCCTGTTACATaGCTCTGGAGCAAGCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GSGLRKTMTADYSSPGEAEGPVT*LWSKQS Trigger: GGACTGCTTGCTCCAGAGCAATGTAACAGGGCCTTC...TGCCTCCCCAGGAGAACTGTAATCGGCAGTCATAGTTTTTCTTAAACCACTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS-3UTR CAA 90 bp | TCACAGGCAAGATACAAAGTGTTGTCCAAAATCTTTCTGGCTAGCCAGTCAGTTGGAGCGGCTGACCACTaGCAGGATGAAGGTGGCGTA | + |
|
Preference number: 5 (lower is better) Translates to: SQARYKVLSKIFLASQSVGAADH*QDEGGV Trigger: TACGCCACCTTCATCCTGCAAGTGGTCAGCCGCTCC...AACTGACTGGCTAGCCAGAAAGATTTTGGACAACACTTTGTATCTTGCCTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS-3UTR CAA 90 bp | CCTCTGGAAGAGCAGCCAGTGCTCTTAAGAGTTAAGCCATCTCTCCAACCCCAATTGGTGAGTAGAGAGTaGAGAGTACCAATGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PLEEQPVLLRVKPSLQPQLVSRE*RVPMKR Trigger: CCTCTTCATTGGTACTCTCAACTCTCTACTCACCAA...TTGGGGTTGGAGAGATGGCTTAACTCTTAAGAGCACTGGCTGCTCTTCCAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS-3UTR CAA 90 bp | GAGGAGACATTGCTCACAGGCAAGATACAAAGTGTTGTCCAAAATCTTTCTGGCGTGAGGAAGGCAGCATaGCATCCATACAGGAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: EETLLTGKIQSVVQNLSGVRKAA*HPYRKE Trigger: CTCCTTCCTGTATGGATGCAATGCTGCCTTCCTCAC...GCCAGAAAGATTTTGGACAACACTTTGTATCTTGCCTGTGAGCAATGTCTCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS GCA 90 bp | TTCATGAAGGATGCCAGGGTAAAGATGAGTGAGAACTTCTCATCCTaGGCTTTTAAATCAGAAGGCCCTGTTACATTGCTCTGGAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: FMKDARVKMSENFSS*AFKSEGPVTLLWSK Trigger: CTTGCTCCAGAGCAATGTAACAGGGCCTTCTGATTTAAAAGCGCAGGATGAGAAGTTCTCACTCATCTTTACCCTGGCATCCTTCATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090726.6 ENSMUST00000138719.8 ENSMUST00000141650.8 |
||
| CDS-3UTR CAA 90 bp | CATCTCTCCAACCCCAAGCTAATTATATATAAAAGCTGCCCTAAGTCAATGAATCTCTCAGGGGAGACTTaGAACAGGGGGAACTGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: HLSNPKLIIYKSCPKSMNLSGET*NRGNCS Trigger: GCTACAGTTCCCCCTGTTCAAAGTCTCCCCTGAGAG...ATTCATTGACTTAGGGCAGCTTTTATATATAATTAGCTTGGGGTTGGAGAGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS-3UTR CAA 90 bp | TCACAGGCAAGATACAAAGTGTTGTCCAAAATCTTTCTGGCTAGCCAGTCAGTTGCTTTATTCTCTTTCTaGCTAGCACCAAACCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SQARYKVLSKIFLASQSVALFSF*LAPNLE Trigger: CTCCAGGTTTGGTGCTAGCAAGAAAGAGAATAAAGC...AACTGACTGGCTAGCCAGAAAGATTTTGGACAACACTTTGTATCTTGCCTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS-3UTR CAA 90 bp | AAGAGGAGACATTGCTCACAGGCAAGATACAAAGTGTTGTCCAAAATCTTTCTGTTCCCAATCTGTAGGTaGGTGATAAGGAACAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: KRRHCSQARYKVLSKIFLFPICR*VIRNRI Trigger: AATCCTGTTCCTTATCACCAACCTACAGATTGGGAA...CAGAAAGATTTTGGACAACACTTTGTATCTTGCCTGTGAGCAATGTCTCCTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS GCA 72 bp | GCGCAGCGTCGAAAAGAGTGTTGCTCGTGTTGCTCCTaGTGCTGCTGCTGCTGCTGCTGCTGCTCCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: AQRRKECCSCCS*CCCCCCCCSCC Trigger: GCAGCAGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGCAACACGAGCAACACTCTTTTCGACGCTGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS CAA 90 bp | GAATCGACGAGAGAGCGCGCAGCGTCGAAAAGAGTGTTGCTCGTGTaGCTCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTCCTGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ESTRERAASKRVLLV*LLLLLLLLLLLLLL Trigger: CAGCAGCAGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGCAACACGAGCAACACTCTTTTCGACGCTGCGCGCTCTCTCGTCGATTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS GCA 72 bp | TGCTGCTGCTGCTGCTGCTGCTGCTCCTGCTGCTGCTaGTGTTCTGGTCCAGAGTTCTCTTCCTTGGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: CCCCCCCCSCCC*CSGPEFSSLGG Trigger: GCCACCCAAGGAAGAGAACTCTGGACCAGAACAGCAGCAGCAGCAGGAGCAGCAGCAGCAGCAGCAGCAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS GCA 72 bp | TGTTGCTCGTGTTGCTCCTGCTGCTGCTGCTGCTGCTaGTGCTGCTCCTGCTGCTGCTGCTGTTCTGGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: CCSCCSCCCCCC*CCSCCCCCSGP Trigger: TGGACCAGAACAGCAGCAGCAGCAGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGCAACACGAGCAACA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS GCA 72 bp | GAGTGTTGCTCGTGTTGCTCCTGCTGCTGCTGCTGCTaGTGCTGCTGCTCCTGCTGCTGCTGCTGTTCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: ECCSCCSCCCCC*CCCSCCCCCSG Trigger: ACCAGAACAGCAGCAGCAGCAGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGCAACACGAGCAACACTC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS CAA 72 bp | AGAGAGCGCGCAGCGTCGAAAAGAGTGTTGCTCGTGTaGCTCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RERAASKRVLLV*LLLLLLLLLLL Trigger: GAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGCAACACGAGCAACACTCTTTTCGACGCTGCGCGCTCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS CAA 90 bp | GTGCAAGATGAATCGACGAGAGAGCGCGCAGCGTCGAAAAGAGTGTaGCTCGTGTTGCTCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: VQDESTRERAASKRV*LVLLLLLLLLLLLL Trigger: GAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGCAACACGAGCAACACTCTTTTCGACGCTGCGCGCTCTCTCGTCGATTCATCTTGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS GCA 72 bp | CTGACCACTTGCAGGATGAAGGTGGCGTACTGTAGCTaGATGACAGGAATGGAGGCACACAGGGCAAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LTTCRMKVAYCS*MTGMEAHRAKP Trigger: GGGCTTTGCCCTGTGTGCCTCCATTCCTGTCATGCAGCTACAGTACGCCACCTTCATCCTGCAAGTGGTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS CCA 72 bp | GCTGCTGCTGCTGTTCTGGTCCAGAGTTCTCTTCCTTaGGTGGCAGACATTCCTTTGACCGCAGCTCCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: AAAAVLVQSSLP*VADIPLTAAPW Trigger: CCAAGGAGCTGCGGTCAAAGGAATGTCTGCCACCCAAGGAAGAGAACTCTGGACCAGAACAGCAGCAGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS CAA 72 bp | TGCTCTGAGGGAAATGCCAGCGTGAGGAAGGCAGCATaGCATCCATACAGGAAGGAGCGGCTGACCACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: CSEGNASVRKAA*HPYRKERLTTC Trigger: GCAAGTGGTCAGCCGCTCCTTCCTGTATGGATGCAATGCTGCCTTCCTCACGCTGGCATTTCCCTCAGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS CAA 90 bp | TGCTGCTCCTGCTGCTGCTGCTGTTCTGGTCCAGAGTTCTCTTCCTaGGGTGGCAGACATTCCTTTGACCGCAGCTCCTTGGTTTCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: CCSCCCCCSGPEFSS*GGRHSFDRSSLVSC Trigger: ACACGAAACCAAGGAGCTGCGGTCAAAGGAATGTCTGCCACCCAAGGAAGAGAACTCTGGACCAGAACAGCAGCAGCAGCAGGAGCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS CCA 72 bp | CCTGGAGCACAAGCCATAGCTGTAGTTGGGAGGCAGTaGGTAGGGGATATGTCCCTTGGGCATCAGAAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: PGAQAIAVVGRQ*VGDMSLGHQKE Trigger: TTCCTTCTGATGCCCAAGGGACATATCCCCTACCCACTGCCTCCCAACTACAGCTATGGCTTGTGCTCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS CAA 72 bp | TGCTGCTGCTGCTGTTCTGGTCCAGAGTTCTCTTCCTaGGGTGGCAGACATTCCTTTGACCGCAGCTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: CCCCCSGPEFSS*GGRHSFDRSSL Trigger: CAAGGAGCTGCGGTCAAAGGAATGTCTGCCACCCAAGGAAGAGAACTCTGGACCAGAACAGCAGCAGCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS GCA 72 bp | GCATTGCATCCATACAGGAAGGAGCGGCTGACCACTTaGAGGATGAAGGTGGCGTACTGTAGCTGCATGACA | + |
|
Preference number: 6 (lower is better) Translates to: ALHPYRKERLTT*RMKVAYCSCMT Trigger: TGTCATGCAGCTACAGTACGCCACCTTCATCCTGCAAGTGGTCAGCCGCTCCTTCCTGTATGGATGCAATGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS GCA 72 bp | AGCCACAGCCTCAGACGAGGAACCTGTCCTTTTGGCTaGCTTCTGATACTTCTGTTTAAGGCGGTCCATGAG | + |
|
Preference number: 6 (lower is better) Translates to: SHSLRRGTCPFG*LLILLFKAVHE Trigger: CTCATGGACCGCCTTAAACAGAAGTATCAGAAGGCAGCCAAAAGGACAGGTTCCTCGTCTGAGGCTGTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS CAA 90 bp | TTTCCAAAATGCTCTGAGGGAAATGCCAGCGTGAGGAAGGCAGCATaGCATCCATACAGGAAGGAGCGGCTGACCACTTGCAGGATGAAG | + |
|
Preference number: 6 (lower is better) Translates to: FPKCSEGNASVRKAA*HPYRKERLTTCRMK Trigger: CTTCATCCTGCAAGTGGTCAGCCGCTCCTTCCTGTATGGATGCAATGCTGCCTTCCTCACGCTGGCATTTCCCTCAGAGCATTTTGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS TCA 72 bp | GCCTCAGACGAGGAACCTGTCCTTTTGGCTGCCTTCTaGTACTTCTGTTTAAGGCGGTCCATGAGTAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ASDEEPVLLAAF*YFCLRRSMSKP Trigger: TGGCTTACTCATGGACCGCCTTAAACAGAAGTATCAGAAGGCAGCCAAAAGGACAGGTTCCTCGTCTGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS TCA 72 bp | AGAGCTTTCCAAAATGCTCTGAGGGAAATGCCAGCGTaGGGAAGGCAGCATTGCATCCATACAGGAAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RAFQNALREMPA*GRQHCIHTGRS Trigger: GCTCCTTCCTGTATGGATGCAATGCTGCCTTCCTCACGCTGGCATTTCCCTCAGAGCATTTTGGAAAGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
||
| CDS GCA 72 bp | CATCCTGCGCTTTTAAATCAGAAGGCCCTGTTACATTaGTCTGGAGCAAGCAGTCCTGTTCACAGGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: HPALLNQKALLH*SGASSPVHRAL Trigger: CAGAGCCCTGTGAACAGGACTGCTTGCTCCAGAGCAATGTAACAGGGCCTTCTGATTTAAAAGCGCAGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090726.6 ENSMUST00000138719.8 ENSMUST00000141650.8 |
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| CDS CCA 72 bp | GGTACACCAGGAAGGGATGGACCAATGTCAGGAAAATaGCAAGCCCCATCGATACATACACAGCGTTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: GTPGRDGPMSGK*QAPSIHTQRCS Trigger: AGAGCAACGCTGTGTATGTATCGATGGGGCTTGCCATTTTCCTGACATTGGTCCATCCCTTCCTGGTGTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| CDS CCA 72 bp | CCTTGGGTGGCAGACATTCCTTTGACCGCAGCTCCTTaGTTTCGTGTTCAGCTGCTTTATTCTCTTTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: PWVADIPLTAAP*FRVQLLYSLSC Trigger: GCAAGAAAGAGAATAAAGCAGCTGAACACGAAACCAAGGAGCTGCGGTCAAAGGAATGTCTGCCACCCAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| CDS CAA 90 bp | GAGTTCTCTTCCTTGGGTGGCAGACATTCCTTTGACCGCAGCTCCTaGGTTTCGTGTTCAGCTGCTTTATTCTCTTTCTTGCTAGCACCA | + |
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Preference number: 6 (lower is better) Translates to: EFSSLGGRHSFDRSS*VSCSAALFSFLLAP Trigger: TGGTGCTAGCAAGAAAGAGAATAAAGCAGCTGAACACGAAACCAAGGAGCTGCGGTCAAAGGAATGTCTGCCACCCAAGGAAGAGAACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| CDS TCA 72 bp | CTGCTCGTAAAGCAGCTTAATGACGAGGAACACTGCTaGGGAGGAGTCAAATGCTCCATTGTAGAGGGTGAT | + |
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Preference number: 6 (lower is better) Translates to: LLVKQLNDEEHC*GGVKCSIVEGD Trigger: ATCACCCTCTACAATGGAGCATTTGACTCCTCCTCAGCAGTGTTCCTCGTCATTAAGCTGCTTTACGAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| CDS CCA 72 bp | TGCGCTTTTAAATCAGAAGGCCCTGTTACATTGCTCTaGAGCAAGCAGTCCTGTTCACAGGGCTCTGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: CAFKSEGPVTLL*SKQSCSQGSEK Trigger: CTTTTCAGAGCCCTGTGAACAGGACTGCTTGCTCCAGAGCAATGTAACAGGGCCTTCTGATTTAAAAGCGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090726.6 ENSMUST00000138719.8 ENSMUST00000141650.8 |
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| CDS CAA 72 bp | TCCTTGGGTGGCAGACATTCCTTTGACCGCAGCTCCTaGGTTTCGTGTTCAGCTGCTTTATTCTCTTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SLGGRHSFDRSS*VSCSAALFSFL Trigger: CAAGAAAGAGAATAAAGCAGCTGAACACGAAACCAAGGAGCTGCGGTCAAAGGAATGTCTGCCACCCAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| CDS CAA 72 bp | ATCGATACATACACAGCGTTGCTCTCAGGGGAGACTTaGAACAGGGGGAACTGTAGCAGAGACACAATAGCT | + |
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Preference number: 6 (lower is better) Translates to: IDTYTALLSGET*NRGNCSRDTIA Trigger: AGCTATTGTGTCTCTGCTACAGTTCCCCCTGTTCAAAGTCTCCCCTGAGAGCAACGCTGTGTATGTATCGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090726.6 |
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| CDS GCA 72 bp | GATGCCAGGGTAAAGATGAGTGAGAACTTCTCATCCTaGGCTTTTAAATCAGAAGGCCCTGTTACATTGCTC | + |
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Preference number: 6 (lower is better) Translates to: DARVKMSENFSS*AFKSEGPVTLL Trigger: GAGCAATGTAACAGGGCCTTCTGATTTAAAAGCGCAGGATGAGAAGTTCTCACTCATCTTTACCCTGGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090726.6 ENSMUST00000138719.8 ENSMUST00000141650.8 |
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| CDS TCA 72 bp | ATTGCTCTGGAGCAAGCAGTCCTGTTCACAGGGCTCTaGAAAGTAGTTTTCTGCTTTGAACACAAACAACAG | + |
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Preference number: 6 (lower is better) Translates to: IALEQAVLFTGL*KVVFCFEHKQQ Trigger: CTGTTGTTTGTGTTCAAAGCAGAAAACTACTTTTCAGAGCCCTGTGAACAGGACTGCTTGCTCCAGAGCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090726.6 ENSMUST00000138719.8 ENSMUST00000141650.8 |
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