Pregenerated sensors for SLC43A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027075Ensembl transcript IDs: ENSMUST00000028469.14, ENSMUST00000111624.8, ENSMUST00000111625.2, ENSMUST00000121114.8, ENSMUST00000146816.8
Found 203 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TACAGCCAGCCCCTCAGTCCTTCTCCTGCAGGAAAGGATGCAATATaGATGTGCGTAACATATATGTGTGCACACTTGGCGGCTGGAATC | + |
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Preference number: 1 (lower is better) Translates to: YSQPLSPSPAGKDAI*MCVTYMCAHLAAGI Trigger: GATTCCAGCCGCCAAGTGTGCACACATATATGTTACGCACATGCATATTGCATCCTTTCCTGCAGGAGAAGGACTGAGGGGCTGGCTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| 3UTR GCA 90 bp | TCCTGCAGGAAAGGATGCAATATGCATGTGCGTAACATATATGTGTaGACACTTGGCGGCTGGAATCTTAGTGTGGTCTGTTCACTGATC | + |
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Preference number: 1 (lower is better) Translates to: SCRKGCNMHVRNIYV*TLGGWNLSVVCSLI Trigger: GATCAGTGAACAGACCACACTAAGATTCCAGCCGCCAAGTGTGCACACATATATGTTACGCACATGCATATTGCATCCTTTCCTGCAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| 3UTR-3UTR GCA 90 bp | TCTAAGACCTGTAAGAAACAGCATCAGGGAGGGAACCCGCCCTCCAGCCCCCACCGTAACATATATGTGTaGACACTTGGCGGCTGGAAT | + |
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Preference number: 2 (lower is better) Translates to: SKTCKKQHQGGNPPSSPHRNIYV*TLGGWN Trigger: ATTCCAGCCGCCAAGTGTGCACACATATATGTTACG...GTGGGGGCTGGAGGGCGGGTTCCCTCCCTGATGCTGTTTCTTACAGGTCTTAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| 3UTR-3UTR GCA 90 bp | CTAAGACCTGTAAGAAACAGCATCAGGGAGGGAACCCGCCCTCCAGCCCCCACATCCTGCAGGAAAGGATaGAATATGCATGTGCGTAAC | + |
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Preference number: 2 (lower is better) Translates to: LRPVRNSIREGTRPPAPTSCRKG*NMHVRN Trigger: GTTACGCACATGCATATTGCATCCTTTCCTGCAGGA...TGTGGGGGCTGGAGGGCGGGTTCCCTCCCTGATGCTGTTTCTTACAGGTCTTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGGTCTGTTCACTGATCCCATGAGTTTTCAGAAGGCAACTCCACAGAGGCTCGGCACTGTCTTCAGTTaGTGGATAGCTTGGTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: CGLFTDPMSFQKATPQRLGTVFS*WIAWLG Trigger: CCCCAACCAAGCTATCCATCAACTGAAGACAGTGCC...GAGCCTCTGTGGAGTTGCCTTCTGAAAACTCATGGGATCAGTGAACAGACCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCTTTTTATTTCCTCTAAGACCTGTAAGAAACAGCATCAGGGAGGGAACCCGGGCACTGTCTTCAGTTaGTGGATAGCTTGGTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: SLFISSKTCKKQHQGGNPGTVFS*WIAWLG Trigger: CCCCAACCAAGCTATCCATCAACTGAAGACAGTGCC...CGGGTTCCCTCCCTGATGCTGTTTCTTACAGGTCTTAGAGGAAATAAAAAGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCTTTTTATTTCCTCTAAGACCTGTAAGAAACAGCATCAGGGAGGGAACCCGTGTTCACTGATCCCATaGGTTTTCAGAAGGCAACTC | + |
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Preference number: 2 (lower is better) Translates to: SLFISSKTCKKQHQGGNPCSLIP*VFRRQL Trigger: GAGTTGCCTTCTGAAAACTCATGGGATCAGTGAACA...CGGGTTCCCTCCCTGATGCTGTTTCTTACAGGTCTTAGAGGAAATAAAAAGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| 3UTR CCA 72 bp | CACACTTTCTTTTCAAAGACGATGGCCCAATACCACTaGAACGGGCACTGTCTTCAGTTGATGGATAGCTTG | + |
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Preference number: 3 (lower is better) Translates to: HTFFSKTMAQYH*NGHCLQLMDSL Trigger: CAAGCTATCCATCAACTGAAGACAGTGCCCGTTCCAGTGGTATTGGGCCATCGTCTTTGAAAAGAAAGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| 3UTR GCA 72 bp | AAAGGATGCAATATGCATGTGCGTAACATATATGTGTaGACACTTGGCGGCTGGAATCTTAGTGTGGTCTGT | + |
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Preference number: 3 (lower is better) Translates to: KGCNMHVRNIYV*TLGGWNLSVVC Trigger: ACAGACCACACTAAGATTCCAGCCGCCAAGTGTGCACACATATATGTTACGCACATGCATATTGCATCCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| CDS-3UTR CCA 90 bp | TCTAAGACCTGTAAGAAACAGCATCAGGGAGGGAACCCGCCCTCCAGCCCCCACCGCCCTCCTCCAGGCTaGGGGACTTCTGACTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SKTCKKQHQGGNPPSSPHRPPPG*GTSDSA Trigger: GGCTGAGTCAGAAGTCCCCCAGCCTGGAGGAGGGCG...GTGGGGGCTGGAGGGCGGGTTCCCTCCCTGATGCTGTTTCTTACAGGTCTTAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| CDS-3UTR TCA 90 bp | CCCACACCCCATCCTGGATACAGCCAGCCCCTCAGTCCTTCTCCTGCAGGAAAGGCCCAAAGCGGTCCATaGGAATTCCCAGAGGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: PTPHPGYSQPLSPSPAGKAQSGP*EFPEAV Trigger: CACTGCCTCTGGGAATTCTCATGGACCGCTTTGGGC...CTTTCCTGCAGGAGAAGGACTGAGGGGCTGGCTGTATCCAGGATGGGGTGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| CDS-3UTR GCA 90 bp | AGAAAGCCACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGCCTGTCCTCCCCATCCACCAGCGCCTaGGGTACGCCTGCTTCAGCG | + |
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Preference number: 4 (lower is better) Translates to: RKPQAIPFGLSGLDCLSSPSTSA*GTPASA Trigger: CGCTGAAGCAGGCGTACCGCAGGCGCTGGTGGATGG...GGAGGACAGGCAGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTGGCTTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| CDS-3UTR GCA 90 bp | CCCGGCTCTATGAACACGATGCAGGTAGAAAGCCACAGGCCATTCCCTTCGGTTCCATCCACCAGCGCCTaGGGTACGCCTGCTTCAGCG | + |
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Preference number: 4 (lower is better) Translates to: PGSMNTMQVESHRPFPSVPSTSA*GTPASA Trigger: CGCTGAAGCAGGCGTACCGCAGGCGCTGGTGGATGG...AACCGAAGGGAATGGCCTGTGGCTTTCTACCTGCATCGTGTTCATAGAGCCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| CDS-3UTR GCA 90 bp | TCTAAGACCTGTAAGAAACAGCATCAGGGAGGGAACCCGCCCTCCAGCCCCCACCAGAAGGGATCTCCATaGAGGGGTCCCACCATGGCC | + |
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Preference number: 4 (lower is better) Translates to: SKTCKKQHQGGNPPSSPHQKGSP*RGPTMA Trigger: GGCCATGGTGGGACCCCTGCATGGAGATCCCTTCTG...GTGGGGGCTGGAGGGCGGGTTCCCTCCCTGATGCTGTTTCTTACAGGTCTTAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| CDS-3UTR CCA 90 bp | CACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGCCTGTCCTCCAAGTCTCCGCCCTCCTCCAGGCTaGGGGACTTCTGACTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: HRPFPSVYQALTACPPSLRPPPG*GTSDSA Trigger: GGCTGAGTCAGAAGTCCCCCAGCCTGGAGGAGGGCG...GAGACTTGGAGGACAGGCAGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| CDS-3UTR TCA 90 bp | CCCACACCCCATCCTGGATACAGCCAGCCCCTCAGTCCTTCTCCTGCAGGAAAGAGAAGCGGTCACCTGTaGCCTTGTGGTCCAAGGCTA | + |
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Preference number: 4 (lower is better) Translates to: PTPHPGYSQPLSPSPAGKRSGHL*PCGPRL Trigger: TAGCCTTGGACCACAAGGTCACAGGTGACCGCTTCT...CTTTCCTGCAGGAGAAGGACTGAGGGGCTGGCTGTATCCAGGATGGGGTGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| CDS-3UTR TCA 90 bp | TCTAAGACCTGTAAGAAACAGCATCAGGGAGGGAACCCGCCCTCCAGCCCCCACGAGACCTCCACAGGCTaGGTGGAAGAAACCGCGAAC | + |
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Preference number: 4 (lower is better) Translates to: SKTCKKQHQGGNPPSSPHETSTG*VEETAN Trigger: GTTCGCGGTTTCTTCCACTCAGCCTGTGGAGGTCTC...GTGGGGGCTGGAGGGCGGGTTCCCTCCCTGATGCTGTTTCTTACAGGTCTTAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| CDS-3UTR CCA 90 bp | CCCGGCTCTATGAACACGATGCAGGTAGAAAGCCACAGGCCATTCCCTTCGGTTTCAGCGTGGGAGCCATaGTGGCCGAGACTCTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: PGSMNTMQVESHRPFPSVSAWEP*WPRLCP Trigger: GGGACAGAGTCTCGGCCACCATGGCTCCCACGCTGA...AACCGAAGGGAATGGCCTGTGGCTTTCTACCTGCATCGTGTTCATAGAGCCGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028469.14 |
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| CDS-3UTR TCA 90 bp | CCCACACCCCATCCTGGATACAGCCAGCCCCTCAGTCCTTCTCCTGCAGGAAAGCACAGTTCAAAAAGATaGGACAGGCCAGGCCAGACC | + |
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Preference number: 4 (lower is better) Translates to: PTPHPGYSQPLSPSPAGKHSSKR*DRPGQT Trigger: GGTCTGGCCTGGCCTGTCTCATCTTTTTGAACTGTG...CTTTCCTGCAGGAGAAGGACTGAGGGGCTGGCTGTATCCAGGATGGGGTGTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| CDS-3UTR TCA 90 bp | CTAAGACCTGTAAGAAACAGCATCAGGGAGGGAACCCGCCCTCCAGCCCCCACAAGAAGCGGTCACCTGTaGCCTTGTGGTCCAAGGCTA | + |
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Preference number: 4 (lower is better) Translates to: LRPVRNSIREGTRPPAPTRSGHL*PCGPRL Trigger: TAGCCTTGGACCACAAGGTCACAGGTGACCGCTTCT...TGTGGGGGCTGGAGGGCGGGTTCCCTCCCTGATGCTGTTTCTTACAGGTCTTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| CDS-3UTR TCA 90 bp | CCCACACCCCATCCTGGATACAGCCAGCCCCTCAGTCCTTCTCCTGCAGGAAAGCACCCATATAGAAGATaGCCCGAAGCTGGGTCATGC | + |
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Preference number: 4 (lower is better) Translates to: PTPHPGYSQPLSPSPAGKHPYRR*PEAGSC Trigger: GCATGACCCAGCTTCGGGTCATCTTCTATATGGGTG...CTTTCCTGCAGGAGAAGGACTGAGGGGCTGGCTGTATCCAGGATGGGGTGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| CDS-3UTR GCA 90 bp | AGAAAGCCACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGCCTGTCCTCCCAGAAGGGATCTCCATaGAGGGGTCCCACCATGGCC | + |
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Preference number: 4 (lower is better) Translates to: RKPQAIPFGLSGLDCLSSQKGSP*RGPTMA Trigger: GGCCATGGTGGGACCCCTGCATGGAGATCCCTTCTG...GGAGGACAGGCAGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTGGCTTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| CDS-3UTR GCA 90 bp | CCCGGCTCTATGAACACGATGCAGGTAGAAAGCCACAGGCCATTCCCTTCGGTTCAGAAGGGATCTCCATaGAGGGGTCCCACCATGGCC | + |
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Preference number: 4 (lower is better) Translates to: PGSMNTMQVESHRPFPSVQKGSP*RGPTMA Trigger: GGCCATGGTGGGACCCCTGCATGGAGATCCCTTCTG...AACCGAAGGGAATGGCCTGTGGCTTTCTACCTGCATCGTGTTCATAGAGCCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| CDS-3UTR CCA 90 bp | GTGTGGAGAAAGGGCAGCCCCACACTTTCTTTTCAAAGACGATGGCCCAATACCCGCCCTCCTCCAGGCTaGGGGACTTCTGACTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: VWRKGSPTLSFQRRWPNTRPPPG*GTSDSA Trigger: GGCTGAGTCAGAAGTCCCCCAGCCTGGAGGAGGGCG...GGTATTGGGCCATCGTCTTTGAAAAGAAAGTGTGGGGCTGCCCTTTCTCCACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| CDS-3UTR CCA 90 bp | CCCACACCCCATCCTGGATACAGCCAGCCCCTCAGTCCTTCTCCTGCAGGAAAGCCTCCACAGGCTGAGTaGAAGAAACCGCGAACTATG | + |
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Preference number: 4 (lower is better) Translates to: PTPHPGYSQPLSPSPAGKPPQAE*KKPRTM Trigger: CATAGTTCGCGGTTTCTTCCACTCAGCCTGTGGAGG...CTTTCCTGCAGGAGAAGGACTGAGGGGCTGGCTGTATCCAGGATGGGGTGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| CDS-3UTR CCA 90 bp | GCAGGTAGAAAGCCACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGCCTGTCAGCGTGGGAGCCATaGTGGCCGAGACTCTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: AGRKPQAIPFGLSGLDCLSAWEP*WPRLCR Trigger: TCTGCAGAGTCTCGGCCACCATGGCTCCCACGCTGA...CAGGCAGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTGGCTTTCTACCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111625.2 |
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| CDS-3UTR TCA 90 bp | GCAGGTAGAAAGCCACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGCCTGGCCCAAAGCGGTCCATaGGAATTCCCAGAGGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: AGRKPQAIPFGLSGLDCLAQSGP*EFPEAV Trigger: CACTGCCTCTGGGAATTCTCATGGACCGCTTTGGGC...CAGGCAGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTGGCTTTCTACCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| CDS-3UTR GCA 90 bp | TGTGGAGAAAGGGCAGCCCCACACTTTCTTTTCAAAGACGATGGCCCAATACCACCATCCACCAGCGCCTaGGGTACGCCTGCTTCAGCG | + |
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Preference number: 4 (lower is better) Translates to: CGERAAPHFLFKDDGPIPPSTSA*GTPASA Trigger: CGCTGAAGCAGGCGTACCGCAGGCGCTGGTGGATGG...TGGTATTGGGCCATCGTCTTTGAAAAGAAAGTGTGGGGCTGCCCTTTCTCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| CDS-3UTR CCA 90 bp | CTAAGACCTGTAAGAAACAGCATCAGGGAGGGAACCCGCCCTCCAGCCCCCACACATCTTGGGTGGTATTaGTCCTGTTCTCAGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: LRPVRNSIREGTRPPAPTHLGWY*SCSQLG Trigger: GCCCAGCTGAGAACAGGACCAATACCACCCAAGATG...TGTGGGGGCTGGAGGGCGGGTTCCCTCCCTGATGCTGTTTCTTACAGGTCTTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| CDS-3UTR CCA 90 bp | TGTGGTCTGTTCACTGATCCCATGAGTTTTCAGAAGGCAACTCCACAGAGGCTCCGCCCTCCTCCAGGCTaGGGGACTTCTGACTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: CGLFTDPMSFQKATPQRLRPPPG*GTSDSA Trigger: GGCTGAGTCAGAAGTCCCCCAGCCTGGAGGAGGGCG...GAGCCTCTGTGGAGTTGCCTTCTGAAAACTCATGGGATCAGTGAACAGACCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| CDS-3UTR CCA 90 bp | GGGCAGCCCCACACTTTCTTTTCAAAGACGATGGCCCAATACCACTGGAACGGGGGCTCCACAGGAAAATaGGGGAGCAGAGGCTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: GQPHTFFSKTMAQYHWNGGSTGK*GSRGSC Trigger: GCAAGAGCCTCTGCTCCCCCATTTTCCTGTGGAGCC...CCCGTTCCAGTGGTATTGGGCCATCGTCTTTGAAAAGAAAGTGTGGGGCTGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| CDS-3UTR CCA 90 bp | TCTAAGACCTGTAAGAAACAGCATCAGGGAGGGAACCCGCCCTCCAGCCCCCACCCTCCACAGGCTGAGTaGAAGAAACCGCGAACTATG | + |
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Preference number: 4 (lower is better) Translates to: SKTCKKQHQGGNPPSSPHPPQAE*KKPRTM Trigger: CATAGTTCGCGGTTTCTTCCACTCAGCCTGTGGAGG...GTGGGGGCTGGAGGGCGGGTTCCCTCCCTGATGCTGTTTCTTACAGGTCTTAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| CDS-3UTR TCA 90 bp | GGGCAGCCCCACACTTTCTTTTCAAAGACGATGGCCCAATACCACTGGAACGGGAGAAGCGGTCACCTGTaGCCTTGTGGTCCAAGGCTA | + |
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Preference number: 4 (lower is better) Translates to: GQPHTFFSKTMAQYHWNGRSGHL*PCGPRL Trigger: TAGCCTTGGACCACAAGGTCACAGGTGACCGCTTCT...CCCGTTCCAGTGGTATTGGGCCATCGTCTTTGAAAAGAAAGTGTGGGGCTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| CDS-3UTR TCA 90 bp | GCAGGTAGAAAGCCACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGCCTGTTCAGGAGTCTCCTCTaGGGTACCAGGGATATCCGG | + |
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Preference number: 4 (lower is better) Translates to: AGRKPQAIPFGLSGLDCLFRSLL*GTRDIR Trigger: CCGGATATCCCTGGTACCTCAGAGGAGACTCCTGAA...CAGGCAGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTGGCTTTCTACCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| CDS-3UTR TCA 90 bp | CCCGGCTCTATGAACACGATGCAGGTAGAAAGCCACAGGCCATTCCCTTCGGTTTTCAGGAGTCTCCTCTaGGGTACCAGGGATATCCGG | + |
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Preference number: 4 (lower is better) Translates to: PGSMNTMQVESHRPFPSVFRSLL*GTRDIR Trigger: CCGGATATCCCTGGTACCTCAGAGGAGACTCCTGAA...AACCGAAGGGAATGGCCTGTGGCTTTCTACCTGCATCGTGTTCATAGAGCCGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| CDS-3UTR TCA 90 bp | CACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGCCTGTCCTCCAAGTCTCTTCAGGAGTCTCCTCTaGGGTACCAGGGATATCCGG | + |
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Preference number: 4 (lower is better) Translates to: HRPFPSVYQALTACPPSLFRSLL*GTRDIR Trigger: CCGGATATCCCTGGTACCTCAGAGGAGACTCCTGAA...GAGACTTGGAGGACAGGCAGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| CDS-3UTR TCA 90 bp | AGAAAGCCACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGCCTGTCCTCCTTCAGGAGTCTCCTCTaGGGTACCAGGGATATCCGG | + |
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Preference number: 4 (lower is better) Translates to: RKPQAIPFGLSGLDCLSSFRSLL*GTRDIR Trigger: CCGGATATCCCTGGTACCTCAGAGGAGACTCCTGAA...GGAGGACAGGCAGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTGGCTTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| CDS-3UTR TCA 90 bp | CACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGCCTGTCCTCCAAGTCTCGGGTCATGCCCATGGTaGCAAGGCTCCACAGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: HRPFPSVYQALTACPPSLGSCPW*QGSTGK Trigger: TTTTCCTGTGGAGCCTTGTCACCATGGGCATGACCC...GAGACTTGGAGGACAGGCAGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| CDS-3UTR TCA 90 bp | AGAAAGCCACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGCCTGTCCTCCGGGTCATGCCCATGGTaGCAAGGCTCCACAGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: RKPQAIPFGLSGLDCLSSGSCPW*QGSTGK Trigger: TTTTCCTGTGGAGCCTTGTCACCATGGGCATGACCC...GGAGGACAGGCAGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTGGCTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| CDS-3UTR TCA 90 bp | CCCACACCCCATCCTGGATACAGCCAGCCCCTCAGTCCTTCTCCTGCAGGAAAGTGCCACCAGTCACAATaGACTCCAGGATCTTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PTPHPGYSQPLSPSPAGKCHQSQ*TPGSCS Trigger: TGAACAAGATCCTGGAGTTCATTGTGACTGGTGGCA...CTTTCCTGCAGGAGAAGGACTGAGGGGCTGGCTGTATCCAGGATGGGGTGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR GCA 90 bp | AGAAAGCCACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGCCTGTCCTCCGGCAGGAAAGGCTTCTaGAGGCCAGTTGAGAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RKPQAIPFGLSGLDCLSSGRKGF*RPVEST Trigger: TGTGCTCTCAACTGGCCTGCAGAAGCCTTTCCTGCC...GGAGGACAGGCAGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTGGCTTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | CCCACACCCCATCCTGGATACAGCCAGCCCCTCAGTCCTTCTCCTGCAGGAAAGAGAAACCGCGAACTATaGTATGCAGGACAAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PTPHPGYSQPLSPSPAGKRNREL*YAGQRP Trigger: TGGCCTTTGTCCTGCATACCATAGTTCGCGGTTTCT...CTTTCCTGCAGGAGAAGGACTGAGGGGCTGGCTGTATCCAGGATGGGGTGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | CCCACACCCCATCCTGGATACAGCCAGCCCCTCAGTCCTTCTCCTGCAGGAAAGATTGAGCACCTTCTGTaGGTCTACCAAATTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PTPHPGYSQPLSPSPAGKIEHLL*VYQIGG Trigger: GCCACCAATTTGGTAGACCCACAGAAGGTGCTCAAT...CTTTCCTGCAGGAGAAGGACTGAGGGGCTGGCTGTATCCAGGATGGGGTGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| 3UTR CAA 72 bp | GAAAGCCACAGGCCATTCCCTTCGGTTTATCAGGCCTaGACTGCCTGTCCTCCAAGTCTCTTGGCCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ESHRPFPSVYQA*TACPPSLLASG Trigger: TCCTGAGGCCAAGAGACTTGGAGGACAGGCAGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTGGCTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR TCA 90 bp | AAGGGCAGCCCCACACTTTCTTTTCAAAGACGATGGCCCAATACCACTGGAACGGCCCAAAGCGGTCCATaGGAATTCCCAGAGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KGSPTLSFQRRWPNTTGTAQSGP*EFPEAV Trigger: CACTGCCTCTGGGAATTCTCATGGACCGCTTTGGGC...CGTTCCAGTGGTATTGGGCCATCGTCTTTGAAAAGAAAGTGTGGGGCTGCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR TCA 90 bp | AGAAAGCCACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGCCTGTCCTCCCACCCATATAGAAGATaGCCCGAAGCTGGGTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: RKPQAIPFGLSGLDCLSSHPYRR*PEAGSC Trigger: GCATGACCCAGCTTCGGGTCATCTTCTATATGGGTG...GGAGGACAGGCAGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTGGCTTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR TCA 90 bp | CTAAGACCTGTAAGAAACAGCATCAGGGAGGGAACCCGCCCTCCAGCCCCCACATGCCACCAGTCACAATaGACTCCAGGATCTTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LRPVRNSIREGTRPPAPTCHQSQ*TPGSCS Trigger: TGAACAAGATCCTGGAGTTCATTGTGACTGGTGGCA...TGTGGGGGCTGGAGGGCGGGTTCCCTCCCTGATGCTGTTTCTTACAGGTCTTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR TCA 90 bp | GTGTGGAGAAAGGGCAGCCCCACACTTTCTTTTCAAAGACGATGGCCCAATACCGAGACCTCCACAGGCTaGGTGGAAGAAACCGCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VWRKGSPTLSFQRRWPNTETSTG*VEETAN Trigger: GTTCGCGGTTTCTTCCACTCAGCCTGTGGAGGTCTC...GGTATTGGGCCATCGTCTTTGAAAAGAAAGTGTGGGGCTGCCCTTTCTCCACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR TCA 90 bp | AGAAAGCCACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGCCTGTCCTCCGCACTGATGAGAGACTaGAGACCTGTCAGTGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RKPQAIPFGLSGLDCLSSALMRD*RPVSVP Trigger: TGGGACACTGACAGGTCTTCAGTCTCTCATCAGTGC...GGAGGACAGGCAGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTGGCTTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR TCA 90 bp | GGGCAGCCCCACACTTTCTTTTCAAAGACGATGGCCCAATACCACTGGAACGGGGCACTGATGAGAGACTaGAGACCTGTCAGTGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GQPHTFFSKTMAQYHWNGALMRD*RPVSVP Trigger: TGGGACACTGACAGGTCTTCAGTCTCTCATCAGTGC...CCCGTTCCAGTGGTATTGGGCCATCGTCTTTGAAAAGAAAGTGTGGGGCTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGTAGAAAGCCACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGCCTGCATTCTCATTCAGGGTaGCCTCCGTTGGAGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: AGRKPQAIPFGLSGLDCLHSHSG*PPLEHP Trigger: TGGATGCTCCAACGGAGGGCACCCTGAATGAGAATG...CAGGCAGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTGGCTTTCTACCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR GCA 90 bp | CTAAGACCTGTAAGAAACAGCATCAGGGAGGGAACCCGCCCTCCAGCCCCCACAATGAAGAGTAGCTGTTaGAGCAGAGCAAACACGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRPVRNSIREGTRPPAPTMKSSC*SRANTA Trigger: TGCCGTGTTTGCTCTGCTGCAACAGCTACTCTTCAT...TGTGGGGGCTGGAGGGCGGGTTCCCTCCCTGATGCTGTTTCTTACAGGTCTTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGTCTGTTCACTGATCCCATGAGTTTTCAGAAGGCAACTCCACAGAGGCTCCAGAAGGGATCTCCATaGAGGGGTCCCACCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CGLFTDPMSFQKATPQRLQKGSP*RGPTMA Trigger: GGCCATGGTGGGACCCCTGCATGGAGATCCCTTCTG...GAGCCTCTGTGGAGTTGCCTTCTGAAAACTCATGGGATCAGTGAACAGACCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | GGGCAGCCCCACACTTTCTTTTCAAAGACGATGGCCCAATACCACTGGAACGGGCAGCTGGGCACAGGCTaGAATAGAAGCCTTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GQPHTFFSKTMAQYHWNGQLGTG*NRSLPS Trigger: AGAAGGAAGGCTTCTATTCCAGCCTGTGCCCAGCTG...CCCGTTCCAGTGGTATTGGGCCATCGTCTTTGAAAAGAAAGTGTGGGGCTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGCCACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGCCTGTCCTCCACAGCTGGGCACAGGCTaGAATAGAAGCCTTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ESHRPFPSVYQALTACPPQLGTG*NRSLPS Trigger: AGAAGGAAGGCTTCTATTCCAGCCTGTGCCCAGCTG...TGGAGGACAGGCAGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTGGCTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | GGGCAGCCCCACACTTTCTTTTCAAAGACGATGGCCCAATACCACTGGAACGGGGGTCCTGTTCTCAGCTaGGCACAGGCTGGAATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GQPHTFFSKTMAQYHWNGGPVLS*AQAGIE Trigger: TTCTATTCCAGCCTGTGCCCAGCTGAGAACAGGACC...CCCGTTCCAGTGGTATTGGGCCATCGTCTTTGAAAAGAAAGTGTGGGGCTGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAGCCACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGCCTGTCCTCCCATCTTGGGTGGTATTaGTCCTGTTCTCAGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RKPQAIPFGLSGLDCLSSHLGWY*SCSQLG Trigger: GCCCAGCTGAGAACAGGACCAATACCACCCAAGATG...GGAGGACAGGCAGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTGGCTTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | CCCGGCTCTATGAACACGATGCAGGTAGAAAGCCACAGGCCATTCCCTTCGGTTGCCGCTGACCCACAATaGTTACATGGGTGTAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PGSMNTMQVESHRPFPSVAADPQ*LHGCRS Trigger: GCTTCTACACCCATGTAACCATTGTGGGTCAGCGGC...AACCGAAGGGAATGGCCTGTGGCTTTCTACCTGCATCGTGTTCATAGAGCCGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGCAGCCCCACACTTTCTTTTCAAAGACGATGGCCCAATACCACTGGAACGGGCTCCACAGGAAAATaGGGGAGCAGAGGCTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KGSPTLSFQRRWPNTTGTGSTGK*GSRGSC Trigger: GCAAGAGCCTCTGCTCCCCCATTTTCCTGTGGAGCC...CGTTCCAGTGGTATTGGGCCATCGTCTTTGAAAAGAAAGTGTGGGGCTGCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGCCACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGCCTGTCCTCCAAAGATGACCCGAAGCTaGGTCATGCCCATGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: ESHRPFPSVYQALTACPPKMTRS*VMPMVT Trigger: TGTCACCATGGGCATGACCCAGCTTCGGGTCATCTT...TGGAGGACAGGCAGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTGGCTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | CCCGGCTCTATGAACACGATGCAGGTAGAAAGCCACAGGCCATTCCCTTCGGTTAAGATGACCCGAAGCTaGGTCATGCCCATGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: PGSMNTMQVESHRPFPSVKMTRS*VMPMVT Trigger: TGTCACCATGGGCATGACCCAGCTTCGGGTCATCTT...AACCGAAGGGAATGGCCTGTGGCTTTCTACCTGCATCGTGTTCATAGAGCCGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTCCTCTAAGACCTGTAAGAAACAGCATCAGGGAGGGAACCCGCCCTCCAGCGTGGGAGCCATGGTaGCCGAGACTCTGCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LFPLRPVRNSIREGTRPPAWEPW*PRLCRE Trigger: TTCTCTGCAGAGTCTCGGCCACCATGGCTCCCACGC...TGGAGGGCGGGTTCCCTCCCTGATGCTGTTTCTTACAGGTCTTAGAGGAAATAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111625.2 |
||
| CDS-3UTR TCA 90 bp | TTATTTCCTCTAAGACCTGTAAGAAACAGCATCAGGGAGGGAACCCGCCCTCCAGAGACCTCCACAGGCTaGGTGGAAGAAACCGCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LFPLRPVRNSIREGTRPPETSTG*VEETAN Trigger: GTTCGCGGTTTCTTCCACTCAGCCTGTGGAGGTCTC...TGGAGGGCGGGTTCCCTCCCTGATGCTGTTTCTTACAGGTCTTAGAGGAAATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR GCA 90 bp | ACGATGCAGGTAGAAAGCCACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGGCAGGAAAGGCTTCTaGAGGCCAGTTGAGAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: TMQVESHRPFPSVYQALTGRKGF*RPVEST Trigger: TGTGCTCTCAACTGGCCTGCAGAAGCCTTTCCTGCC...AGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTGGCTTTCTACCTGCATCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR GCA 90 bp | AAGGGCAGCCCCACACTTTCTTTTCAAAGACGATGGCCCAATACCACTGGAACGTGGTGGCCGAGACTCTaGAGAGAAACAGAGCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KGSPTLSFQRRWPNTTGTWWPRL*RETERS Trigger: TGAGCGCTCTGTTTCTCTGCAGAGTCTCGGCCACCA...CGTTCCAGTGGTATTGGGCCATCGTCTTTGAAAAGAAAGTGTGGGGCTGCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111625.2 |
||
| CDS-3UTR CCA 90 bp | GCAGGTAGAAAGCCACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGCCTGAAACTTCAGTGTCCCTaGAGGCCAAGGCCATTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AGRKPQAIPFGLSGLDCLKLQCP*RPRPLE Trigger: CTCTAATGGCCTTGGCCTCCAGGGACACTGAAGTTT...CAGGCAGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTGGCTTTCTACCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | CCCGGCTCTATGAACACGATGCAGGTAGAAAGCCACAGGCCATTCCCTTCGGTTTCACCTGTGACCTTGTaGTCCAAGGCTAACCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: PGSMNTMQVESHRPFPSVSPVTL*SKANPM Trigger: CATTGGGTTAGCCTTGGACCACAAGGTCACAGGTGA...AACCGAAGGGAATGGCCTGTGGCTTTCTACCTGCATCGTGTTCATAGAGCCGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | CACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGCCTGTCCTCCAAGTCTCTCACCTGTGACCTTGTaGTCCAAGGCTAACCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: HRPFPSVYQALTACPPSLSPVTL*SKANPM Trigger: CATTGGGTTAGCCTTGGACCACAAGGTCACAGGTGA...GAGACTTGGAGGACAGGCAGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGTCTGTTCACTGATCCCATGAGTTTTCAGAAGGCAACTCCACAGAGGCTCGGCTCCACAGGAAAATaGGGGAGCAGAGGCTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CGLFTDPMSFQKATPQRLGSTGK*GSRGSC Trigger: GCAAGAGCCTCTGCTCCCCCATTTTCCTGTGGAGCC...GAGCCTCTGTGGAGTTGCCTTCTGAAAACTCATGGGATCAGTGAACAGACCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGCCACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGCCTGTCCTCCAGGTCTACCAAATTGGTaGCATACTCTCTCTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ESHRPFPSVYQALTACPPGLPNW*HTLSAG Trigger: GCCTGCAGAGAGAGTATGCCACCAATTTGGTAGACC...TGGAGGACAGGCAGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTGGCTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR TCA 90 bp | CACTTTCTTTTCAAAGACGATGGCCCAATACCACTGGAACGGGCACTGTCTTCAGCCCAAAGCGGTCCATaGGAATTCCCAGAGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: HFLFKDDGPIPLERALSSAQSGP*EFPEAV Trigger: CACTGCCTCTGGGAATTCTCATGGACCGCTTTGGGC...TGAAGACAGTGCCCGTTCCAGTGGTATTGGGCCATCGTCTTTGAAAAGAAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR TCA 90 bp | TGTGGAGAAAGGGCAGCCCCACACTTTCTTTTCAAAGACGATGGCCCAATACCAGGGTCATGCCCATGGTaGCAAGGCTCCACAGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: CGERAAPHFLFKDDGPIPGSCPW*QGSTGK Trigger: TTTTCCTGTGGAGCCTTGTCACCATGGGCATGACCC...TGGTATTGGGCCATCGTCTTTGAAAAGAAAGTGTGGGGCTGCCCTTTCTCCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR TCA 90 bp | CACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGCCTGTCCTCCAAGTCTCTGCCACCAGTCACAATaGACTCCAGGATCTTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HRPFPSVYQALTACPPSLCHQSQ*TPGSCS Trigger: TGAACAAGATCCTGGAGTTCATTGTGACTGGTGGCA...GAGACTTGGAGGACAGGCAGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR TCA 90 bp | CACTTTCTTTTCAAAGACGATGGCCCAATACCACTGGAACGGGCACTGTCTTCAGAGACCTCCACAGGCTaGGTGGAAGAAACCGCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HFLFKDDGPIPLERALSSETSTG*VEETAN Trigger: GTTCGCGGTTTCTTCCACTCAGCCTGTGGAGGTCTC...TGAAGACAGTGCCCGTTCCAGTGGTATTGGGCCATCGTCTTTGAAAAGAAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGTAGAAAGCCACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGCCTGTCCACCTTCTGTCTCTaGTCATTTGTCTCACGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AGRKPQAIPFGLSGLDCLSTFCL*SFVSRS Trigger: GGAACGTGAGACAAATGAGCAGAGACAGAAGGTGGA...CAGGCAGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTGGCTTTCTACCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR GCA 90 bp | CACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGCCTGTCCTCCAAGTCTCTCCACCTTCTGTCTCTaGTCATTTGTCTCACGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HRPFPSVYQALTACPPSLSTFCL*SFVSRS Trigger: GGAACGTGAGACAAATGAGCAGAGACAGAAGGTGGA...GAGACTTGGAGGACAGGCAGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR GCA 90 bp | ACGATGCAGGTAGAAAGCCACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTCATTCTCATTCAGGGTaGCCTCCGTTGGAGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: TMQVESHRPFPSVYQALTHSHSG*PPLEHP Trigger: TGGATGCTCCAACGGAGGGCACCCTGAATGAGAATG...AGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTGGCTTTCTACCTGCATCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR GCA 90 bp | AAGGGCAGCCCCACACTTTCTTTTCAAAGACGATGGCCCAATACCACTGGAACGCATTCTCATTCAGGGTaGCCTCCGTTGGAGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: KGSPTLSFQRRWPNTTGTHSHSG*PPLEHP Trigger: TGGATGCTCCAACGGAGGGCACCCTGAATGAGAATG...CGTTCCAGTGGTATTGGGCCATCGTCTTTGAAAAGAAAGTGTGGGGCTGCCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGCAGCCCCACACTTTCTTTTCAAAGACGATGGCCCAATACCACTGGAACGGGTCCTGTTCTCAGCTaGGCACAGGCTGGAATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KGSPTLSFQRRWPNTTGTGPVLS*AQAGIE Trigger: TTCTATTCCAGCCTGTGCCCAGCTGAGAACAGGACC...CGTTCCAGTGGTATTGGGCCATCGTCTTTGAAAAGAAAGTGTGGGGCTGCCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | ACGATGCAGGTAGAAAGCCACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGGTCCTGTTCTCAGCTaGGCACAGGCTGGAATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TMQVESHRPFPSVYQALTGPVLS*AQAGIE Trigger: TTCTATTCCAGCCTGTGCCCAGCTGAGAACAGGACC...AGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTGGCTTTCTACCTGCATCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | TATAAATCCACAGAACCCGGCTCTATGAACACGATGCAGGTAGAAAGCCACAGGGGCTCCACAGGAAAATaGGGGAGCAGAGGCTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: YKSTEPGSMNTMQVESHRGSTGK*GSRGSC Trigger: GCAAGAGCCTCTGCTCCCCCATTTTCCTGTGGAGCC...CCTGTGGCTTTCTACCTGCATCGTGTTCATAGAGCCGGGTTCTGTGGATTTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAGCCACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGCCTGTCCTCCAGAAACCGCGAACTATaGTATGCAGGACAAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RKPQAIPFGLSGLDCLSSRNREL*YAGQRP Trigger: TGGCCTTTGTCCTGCATACCATAGTTCGCGGTTTCT...GGAGGACAGGCAGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTGGCTTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | CCCGGCTCTATGAACACGATGCAGGTAGAAAGCCACAGGCCATTCCCTTCGGTTATTGAGCACCTTCTGTaGGTCTACCAAATTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGSMNTMQVESHRPFPSVIEHLL*VYQIGG Trigger: GCCACCAATTTGGTAGACCCACAGAAGGTGCTCAAT...AACCGAAGGGAATGGCCTGTGGCTTTCTACCTGCATCGTGTTCATAGAGCCGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR TCA 90 bp | TATAAATCCACAGAACCCGGCTCTATGAACACGATGCAGGTAGAAAGCCACAGGAGAAGCGGTCACCTGTaGCCTTGTGGTCCAAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: YKSTEPGSMNTMQVESHRRSGHL*PCGPRL Trigger: TAGCCTTGGACCACAAGGTCACAGGTGACCGCTTCT...CCTGTGGCTTTCTACCTGCATCGTGTTCATAGAGCCGGGTTCTGTGGATTTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR TCA 90 bp | CACTTTCTTTTCAAAGACGATGGCCCAATACCACTGGAACGGGCACTGTCTTCAGGGTCATGCCCATGGTaGCAAGGCTCCACAGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: HFLFKDDGPIPLERALSSGSCPW*QGSTGK Trigger: TTTTCCTGTGGAGCCTTGTCACCATGGGCATGACCC...TGAAGACAGTGCCCGTTCCAGTGGTATTGGGCCATCGTCTTTGAAAAGAAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR GCA 90 bp | AAGGGCAGCCCCACACTTTCTTTTCAAAGACGATGGCCCAATACCACTGGAACGGGGAGCAGAGGCTCTTaGGAAAAGGGACAGACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KGSPTLSFQRRWPNTTGTGSRGS*EKGQTF Trigger: AAAAGTCTGTCCCTTTTCGCAAGAGCCTCTGCTCCC...CGTTCCAGTGGTATTGGGCCATCGTCTTTGAAAAGAAAGTGTGGGGCTGCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR GCA 90 bp | ACGATGCAGGTAGAAAGCCACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGGGAGCAGAGGCTCTTaGGAAAAGGGACAGACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TMQVESHRPFPSVYQALTGSRGS*EKGQTF Trigger: AAAAGTCTGTCCCTTTTCGCAAGAGCCTCTGCTCCC...AGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTGGCTTTCTACCTGCATCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGTCTGTTCACTGATCCCATGAGTTTTCAGAAGGCAACTCCACAGAGGCTCCATTCTCATTCAGGGTaGCCTCCGTTGGAGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: CGLFTDPMSFQKATPQRLHSHSG*PPLEHP Trigger: TGGATGCTCCAACGGAGGGCACCCTGAATGAGAATG...GAGCCTCTGTGGAGTTGCCTTCTGAAAACTCATGGGATCAGTGAACAGACCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGAGAAAGGGCAGCCCCACACTTTCTTTTCAAAGACGATGGCCCAATACCACAGCTGGGCACAGGCTaGAATAGAAGCCTTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CGERAAPHFLFKDDGPIPQLGTG*NRSLPS Trigger: AGAAGGAAGGCTTCTATTCCAGCCTGTGCCCAGCTG...TGGTATTGGGCCATCGTCTTTGAAAAGAAAGTGTGGGGCTGCCCTTTCTCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | ACGATGCAGGTAGAAAGCCACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTTCACCTGTGACCTTGTaGTCCAAGGCTAACCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: TMQVESHRPFPSVYQALTSPVTL*SKANPM Trigger: CATTGGGTTAGCCTTGGACCACAAGGTCACAGGTGA...AGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTGGCTTTCTACCTGCATCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTCCTCTAAGACCTGTAAGAAACAGCATCAGGGAGGGAACCCGCCCTCCAGCCGCTGACCCACAATaGTTACATGGGTGTAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LFPLRPVRNSIREGTRPPAADPQ*LHGCRS Trigger: GCTTCTACACCCATGTAACCATTGTGGGTCAGCGGC...TGGAGGGCGGGTTCCCTCCCTGATGCTGTTTCTTACAGGTCTTAGAGGAAATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGAGAAAGGGCAGCCCCACACTTTCTTTTCAAAGACGATGGCCCAATACCAGCCGCTGACCCACAATaGTTACATGGGTGTAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CGERAAPHFLFKDDGPIPAADPQ*LHGCRS Trigger: GCTTCTACACCCATGTAACCATTGTGGGTCAGCGGC...TGGTATTGGGCCATCGTCTTTGAAAAGAAAGTGTGGGGCTGCCCTTTCTCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGTCTGTTCACTGATCCCATGAGTTTTCAGAAGGCAACTCCACAGAGGCTCAAGATGACCCGAAGCTaGGTCATGCCCATGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: CGLFTDPMSFQKATPQRLKMTRS*VMPMVT Trigger: TGTCACCATGGGCATGACCCAGCTTCGGGTCATCTT...GAGCCTCTGTGGAGTTGCCTTCTGAAAACTCATGGGATCAGTGAACAGACCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTCCTCTAAGACCTGTAAGAAACAGCATCAGGGAGGGAACCCGCCCTCCACCTCCACAGGCTGAGTaGAAGAAACCGCGAACTATG | + |
|
Preference number: 4 (lower is better) Translates to: LFPLRPVRNSIREGTRPPPPQAE*KKPRTM Trigger: CATAGTTCGCGGTTTCTTCCACTCAGCCTGTGGAGG...TGGAGGGCGGGTTCCCTCCCTGATGCTGTTTCTTACAGGTCTTAGAGGAAATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR TCA 90 bp | CACTTTCTTTTCAAAGACGATGGCCCAATACCACTGGAACGGGCACTGTCTTCACACCCATATAGAAGATaGCCCGAAGCTGGGTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: HFLFKDDGPIPLERALSSHPYRR*PEAGSC Trigger: GCATGACCCAGCTTCGGGTCATCTTCTATATGGGTG...TGAAGACAGTGCCCGTTCCAGTGGTATTGGGCCATCGTCTTTGAAAAGAAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR TCA 90 bp | GTGTGGAGAAAGGGCAGCCCCACACTTTCTTTTCAAAGACGATGGCCCAATACCGACACAACAGCTGCATaGCTCCAAAGATGGAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VWRKGSPTLSFQRRWPNTDTTAA*LQRWKS Trigger: ACTCTTCCATCTTTGGAGTCATGCAGCTGTTGTGTC...GGTATTGGGCCATCGTCTTTGAAAAGAAAGTGTGGGGCTGCCCTTTCTCCACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR TCA 90 bp | CACTTTCTTTTCAAAGACGATGGCCCAATACCACTGGAACGGGCACTGTCTTCAGCACTGATGAGAGACTaGAGACCTGTCAGTGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HFLFKDDGPIPLERALSSALMRD*RPVSVP Trigger: TGGGACACTGACAGGTCTTCAGTCTCTCATCAGTGC...TGAAGACAGTGCCCGTTCCAGTGGTATTGGGCCATCGTCTTTGAAAAGAAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR GCA 90 bp | TTATTTCCTCTAAGACCTGTAAGAAACAGCATCAGGGAGGGAACCCGCCCTCCAGGGAGCAGAGGCTCTTaGGAAAAGGGACAGACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LFPLRPVRNSIREGTRPPGSRGS*EKGQTF Trigger: AAAAGTCTGTCCCTTTTCGCAAGAGCCTCTGCTCCC...TGGAGGGCGGGTTCCCTCCCTGATGCTGTTTCTTACAGGTCTTAGAGGAAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGGAGAAAGGGCAGCCCCACACTTTCTTTTCAAAGACGATGGCCCAATACCATGAAGAGTAGCTGTTaGAGCAGAGCAAACACGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VWRKGSPTLSFQRRWPNTMKSSC*SRANTA Trigger: TGCCGTGTTTGCTCTGCTGCAACAGCTACTCTTCAT...GGTATTGGGCCATCGTCTTTGAAAAGAAAGTGTGGGGCTGCCCTTTCTCCACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | TATAAATCCACAGAACCCGGCTCTATGAACACGATGCAGGTAGAAAGCCACAGGCATCTTGGGTGGTATTaGTCCTGTTCTCAGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YKSTEPGSMNTMQVESHRHLGWY*SCSQLG Trigger: GCCCAGCTGAGAACAGGACCAATACCACCCAAGATG...CCTGTGGCTTTCTACCTGCATCGTGTTCATAGAGCCGGGTTCTGTGGATTTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTCCTCTAAGACCTGTAAGAAACAGCATCAGGGAGGGAACCCGCCCTCCAAAACTTCAGTGTCCCTaGAGGCCAAGGCCATTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LFPLRPVRNSIREGTRPPKLQCP*RPRPLE Trigger: CTCTAATGGCCTTGGCCTCCAGGGACACTGAAGTTT...TGGAGGGCGGGTTCCCTCCCTGATGCTGTTTCTTACAGGTCTTAGAGGAAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | ACGATGCAGGTAGAAAGCCACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTAGAAACCGCGAACTATaGTATGCAGGACAAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TMQVESHRPFPSVYQALTRNREL*YAGQRP Trigger: TGGCCTTTGTCCTGCATACCATAGTTCGCGGTTTCT...AGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTGGCTTTCTACCTGCATCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTCCTCTAAGACCTGTAAGAAACAGCATCAGGGAGGGAACCCGCCCTCCAGGTCTACCAAATTGGTaGCATACTCTCTCTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LFPLRPVRNSIREGTRPPGLPNW*HTLSAG Trigger: GCCTGCAGAGAGAGTATGCCACCAATTTGGTAGACC...TGGAGGGCGGGTTCCCTCCCTGATGCTGTTTCTTACAGGTCTTAGAGGAAATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR TCA 90 bp | TCCCTTTTTATTTCCTCTAAGACCTGTAAGAAACAGCATCAGGGAGGGAACCCGCACCCATATAGAAGATaGCCCGAAGCTGGGTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: SLFISSKTCKKQHQGGNPHPYRR*PEAGSC Trigger: GCATGACCCAGCTTCGGGTCATCTTCTATATGGGTG...CGGGTTCCCTCCCTGATGCTGTTTCTTACAGGTCTTAGAGGAAATAAAAAGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR TCA 90 bp | TGTGGAGAAAGGGCAGCCCCACACTTTCTTTTCAAAGACGATGGCCCAATACCAGACACAACAGCTGCATaGCTCCAAAGATGGAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CGERAAPHFLFKDDGPIPDTTAA*LQRWKS Trigger: ACTCTTCCATCTTTGGAGTCATGCAGCTGTTGTGTC...TGGTATTGGGCCATCGTCTTTGAAAAGAAAGTGTGGGGCTGCCCTTTCTCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR TCA 90 bp | TGTGGTCTGTTCACTGATCCCATGAGTTTTCAGAAGGCAACTCCACAGAGGCTCGACACAACAGCTGCATaGCTCCAAAGATGGAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CGLFTDPMSFQKATPQRLDTTAA*LQRWKS Trigger: ACTCTTCCATCTTTGGAGTCATGCAGCTGTTGTGTC...GAGCCTCTGTGGAGTTGCCTTCTGAAAACTCATGGGATCAGTGAACAGACCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR GCA 90 bp | TATAAATCCACAGAACCCGGCTCTATGAACACGATGCAGGTAGAAAGCCACAGGGGGAGCAGAGGCTCTTaGGAAAAGGGACAGACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: YKSTEPGSMNTMQVESHRGSRGS*EKGQTF Trigger: AAAAGTCTGTCCCTTTTCGCAAGAGCCTCTGCTCCC...CCTGTGGCTTTCTACCTGCATCGTGTTCATAGAGCCGGGTTCTGTGGATTTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGTCTGTTCACTGATCCCATGAGTTTTCAGAAGGCAACTCCACAGAGGCTCATGAAGAGTAGCTGTTaGAGCAGAGCAAACACGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CGLFTDPMSFQKATPQRLMKSSC*SRANTA Trigger: TGCCGTGTTTGCTCTGCTGCAACAGCTACTCTTCAT...GAGCCTCTGTGGAGTTGCCTTCTGAAAACTCATGGGATCAGTGAACAGACCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGAGAAAGGGCAGCCCCACACTTTCTTTTCAAAGACGATGGCCCAATACCAATGAAGAGTAGCTGTTaGAGCAGAGCAAACACGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CGERAAPHFLFKDDGPIPMKSSC*SRANTA Trigger: TGCCGTGTTTGCTCTGCTGCAACAGCTACTCTTCAT...TGGTATTGGGCCATCGTCTTTGAAAAGAAAGTGTGGGGCTGCCCTTTCTCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | CCCGGCTCTATGAACACGATGCAGGTAGAAAGCCACAGGCCATTCCCTTCGGTTTGCCAGGAATATCAATaGAGACAAAACTTCAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGSMNTMQVESHRPFPSVCQEYQ*RQNFSV Trigger: GACACTGAAGTTTTGTCTCCATTGATATTCCTGGCA...AACCGAAGGGAATGGCCTGTGGCTTTCTACCTGCATCGTGTTCATAGAGCCGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | CACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGCCTGTCCTCCAAGTCTCTGCCAGGAATATCAATaGAGACAAAACTTCAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: HRPFPSVYQALTACPPSLCQEYQ*RQNFSV Trigger: GACACTGAAGTTTTGTCTCCATTGATATTCCTGGCA...GAGACTTGGAGGACAGGCAGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | GGGCAGCCCCACACTTTCTTTTCAAAGACGATGGCCCAATACCACTGGAACGGGTGCCAGGAATATCAATaGAGACAAAACTTCAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GQPHTFFSKTMAQYHWNGCQEYQ*RQNFSV Trigger: GACACTGAAGTTTTGTCTCCATTGATATTCCTGGCA...CCCGTTCCAGTGGTATTGGGCCATCGTCTTTGAAAAGAAAGTGTGGGGCTGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTCCTCTAAGACCTGTAAGAAACAGCATCAGGGAGGGAACCCGCCCTCCAAGAAACCGCGAACTATaGTATGCAGGACAAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFPLRPVRNSIREGTRPPRNREL*YAGQRP Trigger: TGGCCTTTGTCCTGCATACCATAGTTCGCGGTTTCT...TGGAGGGCGGGTTCCCTCCCTGATGCTGTTTCTTACAGGTCTTAGAGGAAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | TCCCTTTTTATTTCCTCTAAGACCTGTAAGAAACAGCATCAGGGAGGGAACCCGCCTCCACAGGCTGAGTaGAAGAAACCGCGAACTATG | + |
|
Preference number: 4 (lower is better) Translates to: SLFISSKTCKKQHQGGNPPPQAE*KKPRTM Trigger: CATAGTTCGCGGTTTCTTCCACTCAGCCTGTGGAGG...CGGGTTCCCTCCCTGATGCTGTTTCTTACAGGTCTTAGAGGAAATAAAAAGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | TATAAATCCACAGAACCCGGCTCTATGAACACGATGCAGGTAGAAAGCCACAGGGGTCTACCAAATTGGTaGCATACTCTCTCTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: YKSTEPGSMNTMQVESHRGLPNW*HTLSAG Trigger: GCCTGCAGAGAGAGTATGCCACCAATTTGGTAGACC...CCTGTGGCTTTCTACCTGCATCGTGTTCATAGAGCCGGGTTCTGTGGATTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGAGAAAGGGCAGCCCCACACTTTCTTTTCAAAGACGATGGCCCAATACCAATTGAGCACCTTCTGTaGGTCTACCAAATTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CGERAAPHFLFKDDGPIPIEHLL*VYQIGG Trigger: GCCACCAATTTGGTAGACCCACAGAAGGTGCTCAAT...TGGTATTGGGCCATCGTCTTTGAAAAGAAAGTGTGGGGCTGCCCTTTCTCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR TCA 90 bp | CCTTCTCCTGCAGGAAAGGATGCAATATGCATGTGCGTAACATATATGTGTGCAGCACTGATGAGAGACTaGAGACCTGTCAGTGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSPAGKDAICMCVTYMCAALMRD*RPVSVP Trigger: TGGGACACTGACAGGTCTTCAGTCTCTCATCAGTGC...TGCACACATATATGTTACGCACATGCATATTGCATCCTTTCCTGCAGGAGAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR GCA 90 bp | TATAAATCCACAGAACCCGGCTCTATGAACACGATGCAGGTAGAAAGCCACAGGTCCACCTTCTGTCTCTaGTCATTTGTCTCACGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: YKSTEPGSMNTMQVESHRSTFCL*SFVSRS Trigger: GGAACGTGAGACAAATGAGCAGAGACAGAAGGTGGA...CCTGTGGCTTTCTACCTGCATCGTGTTCATAGAGCCGGGTTCTGTGGATTTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | CCTTCTCCTGCAGGAAAGGATGCAATATGCATGTGCGTAACATATATGTGTGCACAGCTGGGCACAGGCTaGAATAGAAGCCTTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PSPAGKDAICMCVTYMCAQLGTG*NRSLPS Trigger: AGAAGGAAGGCTTCTATTCCAGCCTGTGCCCAGCTG...TGCACACATATATGTTACGCACATGCATATTGCATCCTTTCCTGCAGGAGAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | CCTTCTCCTGCAGGAAAGGATGCAATATGCATGTGCGTAACATATATGTGTGCAAAGATGACCCGAAGCTaGGTCATGCCCATGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: PSPAGKDAICMCVTYMCAKMTRS*VMPMVT Trigger: TGTCACCATGGGCATGACCCAGCTTCGGGTCATCTT...TGCACACATATATGTTACGCACATGCATATTGCATCCTTTCCTGCAGGAGAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | CACTTTCTTTTCAAAGACGATGGCCCAATACCACTGGAACGGGCACTGTCTTCAATTGAGCACCTTCTGTaGGTCTACCAAATTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HFLFKDDGPIPLERALSSIEHLL*VYQIGG Trigger: GCCACCAATTTGGTAGACCCACAGAAGGTGCTCAAT...TGAAGACAGTGCCCGTTCCAGTGGTATTGGGCCATCGTCTTTGAAAAGAAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR GCA 90 bp | TCCCTTTTTATTTCCTCTAAGACCTGTAAGAAACAGCATCAGGGAGGGAACCCGTCCACCTTCTGTCTCTaGTCATTTGTCTCACGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLFISSKTCKKQHQGGNPSTFCL*SFVSRS Trigger: GGAACGTGAGACAAATGAGCAGAGACAGAAGGTGGA...CGGGTTCCCTCCCTGATGCTGTTTCTTACAGGTCTTAGAGGAAATAAAAAGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | CCTTCTCCTGCAGGAAAGGATGCAATATGCATGTGCGTAACATATATGTGTGCAAAACTTCAGTGTCCCTaGAGGCCAAGGCCATTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PSPAGKDAICMCVTYMCAKLQCP*RPRPLE Trigger: CTCTAATGGCCTTGGCCTCCAGGGACACTGAAGTTT...TGCACACATATATGTTACGCACATGCATATTGCATCCTTTCCTGCAGGAGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CCA 90 bp | CCTTCTCCTGCAGGAAAGGATGCAATATGCATGTGCGTAACATATATGTGTGCATCACCTGTGACCTTGTaGTCCAAGGCTAACCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: PSPAGKDAICMCVTYMCASPVTL*SKANPM Trigger: CATTGGGTTAGCCTTGGACCACAAGGTCACAGGTGA...TGCACACATATATGTTACGCACATGCATATTGCATCCTTTCCTGCAGGAGAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR TCA 90 bp | CCTTCTCCTGCAGGAAAGGATGCAATATGCATGTGCGTAACATATATGTGTGCATGCCACCAGTCACAATaGACTCCAGGATCTTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PSPAGKDAICMCVTYMCACHQSQ*TPGSCS Trigger: TGAACAAGATCCTGGAGTTCATTGTGACTGGTGGCA...TGCACACATATATGTTACGCACATGCATATTGCATCCTTTCCTGCAGGAGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS CCA 90 bp | CCATCCACCAGCGCCTGCGGTACGCCTGCTTCAGCGTGGGAGCCATaGTGGCCGAGACTCTGTCCCCGACAAACTTGCCTCCCGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PSTSACGTPASAWEP*WPRLCPRQTCLPQL Trigger: CAGCTGCGGGAGGCAAGTTTGTCGGGGACAGAGTCTCGGCCACCATGGCTCCCACGCTGAAGCAGGCGTACCGCAGGCGCTGGTGGATGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028469.14 |
||
| CDS CCA 90 bp | TCCACCAGCGCCTGCGGTACGCCTGCTTCAGCGTGGGAGCCATGGTaGCCGAGACTCTGTCCCCGACAAACTTGCCTCCCGCAGCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: STSACGTPASAWEPW*PRLCPRQTCLPQLL Trigger: CAACAGCTGCGGGAGGCAAGTTTGTCGGGGACAGAGTCTCGGCCACCATGGCTCCCACGCTGAAGCAGGCGTACCGCAGGCGCTGGTGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028469.14 |
||
| CDS CCA 90 bp | CGGTGCAAGCCATCCACCAGCGCCTGCGGTACGCCTGCTTCAGCGTaGGAGCCATGGTGGCCGAGACTCTGTCCCCGACAAACTTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RCKPSTSACGTPASA*EPWWPRLCPRQTCL Trigger: GAGGCAAGTTTGTCGGGGACAGAGTCTCGGCCACCATGGCTCCCACGCTGAAGCAGGCGTACCGCAGGCGCTGGTGGATGGCTTGCACCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028469.14 |
||
| CDS CCA 90 bp | CGGTGCAAGCCATCCACCAGCGCCTGCGGTACGCCTGCTTCAGCGTaGGAGCCATGGTGGCCGAGACTCTGCAGAGAAACAGAGCGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RCKPSTSACGTPASA*EPWWPRLCRETERS Trigger: TGAGCGCTCTGTTTCTCTGCAGAGTCTCGGCCACCATGGCTCCCACGCTGAAGCAGGCGTACCGCAGGCGCTGGTGGATGGCTTGCACCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111625.2 |
||
| CDS GCA 90 bp | TGCGGTACGCCTGCTTCAGCGTGGGAGCCATGGTGGCCGAGACTCTaGAGAGAAACAGAGCGCTCAGAGAAGGGCTTCCTAGCGGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: CGTPASAWEPWWPRL*RETERSEKGFLAAL Trigger: AAGGGCCGCTAGGAAGCCCTTCTCTGAGCGCTCTGTTTCTCTGCAGAGTCTCGGCCACCATGGCTCCCACGCTGAAGCAGGCGTACCGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111625.2 |
||
| CDS-3UTR CAA 90 bp | CTAAGACCTGTAAGAAACAGCATCAGGGAGGGAACCCGCCCTCCAGCCCCCACATCAGGGTGCCCTCCGTaGGAGCATCCACACAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LRPVRNSIREGTRPPAPTSGCPP*EHPHSP Trigger: AGGACTGTGTGGATGCTCCAACGGAGGGCACCCTGA...TGTGGGGGCTGGAGGGCGGGTTCCCTCCCTGATGCTGTTTCTTACAGGTCTTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | TCTAAGACCTGTAAGAAACAGCATCAGGGAGGGAACCCGCCCTCCAGCCCCCACTCAGGGTGCCCTCCGTaGGAGCATCCACACAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SKTCKKQHQGGNPPSSPHSGCPP*EHPHSP Trigger: AGGACTGTGTGGATGCTCCAACGGAGGGCACCCTGA...GTGGGGGCTGGAGGGCGGGTTCCCTCCCTGATGCTGTTTCTTACAGGTCTTAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | CCCACACCCCATCCTGGATACAGCCAGCCCCTCAGTCCTTCTCCTGCAGGAAAGCCCACAAGCAGGATGTaGGTCAGGGTGAAGGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: PTPHPGYSQPLSPSPAGKPTSRM*VRVKAL Trigger: CAATGCCTTCACCCTGACCAACATCCTGCTTGTGGG...CTTTCCTGCAGGAGAAGGACTGAGGGGCTGGCTGTATCCAGGATGGGGTGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS GCA 90 bp | ATGGAGACAAAACTTCAGTGTCCCTGGAGGCCAAGGCCATTAGAGTaGAGGATGCGGCAAAGCAGGCACTGCCCACCAGTCGAAGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: METKLQCPWRPRPLE*RMRQSRHCPPVEEA Trigger: GGCCTCTTCGACTGGTGGGCAGTGCCTGCTTTGCCGCATCCTGCACTCTAATGGCCTTGGCCTCCAGGGACACTGAAGTTTTGTCTCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 ENSMUST00000146816.8 |
||
| CDS-3UTR CAA 90 bp | CCCGGCTCTATGAACACGATGCAGGTAGAAAGCCACAGGCCATTCCCTTCGGTTTCAGGGTGCCCTCCGTaGGAGCATCCACACAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PGSMNTMQVESHRPFPSVSGCPP*EHPHSP Trigger: AGGACTGTGTGGATGCTCCAACGGAGGGCACCCTGA...AACCGAAGGGAATGGCCTGTGGCTTTCTACCTGCATCGTGTTCATAGAGCCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | GAAAGCCACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGCCTGTCCTCCATCAGGGTGCCCTCCGTaGGAGCATCCACACAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ESHRPFPSVYQALTACPPSGCPP*EHPHSP Trigger: AGGACTGTGTGGATGCTCCAACGGAGGGCACCCTGA...TGGAGGACAGGCAGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTGGCTTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | CTAAGACCTGTAAGAAACAGCATCAGGGAGGGAACCCGCCCTCCAGCCCCCACAGGCATTGGTGAGCTTTaGTACCTTGCGGTAGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LRPVRNSIREGTRPPAPTGIGEL*YLAVAW Trigger: CCACGCTACCGCAAGGTACAAAAGCTCACCAATGCC...TGTGGGGGCTGGAGGGCGGGTTCCCTCCCTGATGCTGTTTCTTACAGGTCTTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS GCA 90 bp | AACGAGAGAAGTAGGAGGCCCAGGTTCACCCAGAAGGGATCTCCATaGAGGGGTCCCACCATGGCCATGAAGAGTAGCTGTTGCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: NERSRRPRFTQKGSP*RGPTMAMKSSCCSR Trigger: TCTGCTGCAACAGCTACTCTTCATGGCCATGGTGGGACCCCTGCATGGAGATCCCTTCTGGGTGAACCTGGGCCTCCTACTTCTCTCGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | CCCACACCCCATCCTGGATACAGCCAGCCCCTCAGTCCTTCTCCTGCAGGAAAGAAATTCCCAAACATGTaGGGCAGCGTGAGTGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: PTPHPGYSQPLSPSPAGKKFPNM*GSVSEV Trigger: TACCTCACTCACGCTGCCCAACATGTTTGGGAATTT...CTTTCCTGCAGGAGAAGGACTGAGGGGCTGGCTGTATCCAGGATGGGGTGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | GCAGGTAGAAAGCCACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGCCTGGGGGAGCAGAGGCTCTaGCGAAAAGGGACAGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: AGRKPQAIPFGLSGLDCLGEQRL*RKGTDF Trigger: AAAGTCTGTCCCTTTTCGCAAGAGCCTCTGCTCCCC...CAGGCAGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTGGCTTTCTACCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | GAAAGCCACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGCCTGTCCTCCAGCATCCACACAGTCCTaGATGCGCCAGTCCATGATG | + |
|
Preference number: 5 (lower is better) Translates to: ESHRPFPSVYQALTACPPASTQS*MRQSMM Trigger: CATCATGGACTGGCGCATCAAGGACTGTGTGGATGC...TGGAGGACAGGCAGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTGGCTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | GCAGGTAGAAAGCCACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGCCTGGGCATTGGTGAGCTTTaGTACCTTGCGGTAGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: AGRKPQAIPFGLSGLDCLGIGEL*YLAVAW Trigger: CCACGCTACCGCAAGGTACAAAAGCTCACCAATGCC...CAGGCAGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTGGCTTTCTACCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | CACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGCCTGTCCTCCAAGTCTCCCCACAAGCAGGATGTaGGTCAGGGTGAAGGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: HRPFPSVYQALTACPPSLPTSRM*VRVKAL Trigger: CAATGCCTTCACCCTGACCAACATCCTGCTTGTGGG...GAGACTTGGAGGACAGGCAGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | GAAAGCCACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGCCTGTCCTCCATGCAGGTGTAAGTTCTaGATGAGGCAGGCGATGCCG | + |
|
Preference number: 5 (lower is better) Translates to: ESHRPFPSVYQALTACPPCRCKF*MRQAMP Trigger: CGGCATCGCCTGCCTCATCAAGAACTTACACCTGCA...TGGAGGACAGGCAGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTGGCTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | TCTAAGACCTGTAAGAAACAGCATCAGGGAGGGAACCCGCCCTCCAGCCCCCACTGTGGGTCTACCAAATaGGTGGCATACTCTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SKTCKKQHQGGNPPSSPHCGSTK*VAYSLC Trigger: GCAGAGAGAGTATGCCACCAATTTGGTAGACCCACA...GTGGGGGCTGGAGGGCGGGTTCCCTCCCTGATGCTGTTTCTTACAGGTCTTAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | CTAAGACCTGTAAGAAACAGCATCAGGGAGGGAACCCGCCCTCCAGCCCCCACATTTGTCTCACGTTCCTaGCCACCAGTCACAATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LRPVRNSIREGTRPPAPTFVSRS*PPVTMN Trigger: GTTCATTGTGACTGGTGGCAAGGAACGTGAGACAAA...TGTGGGGGCTGGAGGGCGGGTTCCCTCCCTGATGCTGTTTCTTACAGGTCTTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS CCA 90 bp | AGGACAGTGCCAGGAATATCAATGGAGACAAAACTTCAGTGTCCCTaGAGGCCAAGGCCATTAGAGTGCAGGATGCGGCAAAGCAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RTVPGISMETKLQCP*RPRPLECRMRQSRH Trigger: GTGCCTGCTTTGCCGCATCCTGCACTCTAATGGCCTTGGCCTCCAGGGACACTGAAGTTTTGTCTCCATTGATATTCCTGGCACTGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | GTGTGGAGAAAGGGCAGCCCCACACTTTCTTTTCAAAGACGATGGCCCAATACCGGGGAGCAGAGGCTCTaGCGAAAAGGGACAGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: VWRKGSPTLSFQRRWPNTGEQRL*RKGTDF Trigger: AAAGTCTGTCCCTTTTCGCAAGAGCCTCTGCTCCCC...GGTATTGGGCCATCGTCTTTGAAAAGAAAGTGTGGGGCTGCCCTTTCTCCACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS TCA 90 bp | AAAATGATTGGACGGGAACACAGCAGCGTAGAGACCTCCACAGGCTaGGTGGAAGAAACCGCGAACTATGGTATGCAGGACAAAGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KMIGREHSSVETSTG*VEETANYGMQDKGQ Trigger: CTGGCCTTTGTCCTGCATACCATAGTTCGCGGTTTCTTCCACTCAGCCTGTGGAGGTCTCTACGCTGCTGTGTTCCCGTCCAATCATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | GAAAGCCACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGCCTGTCCTCCACTGATGCTGTTCATCTaGGGTGGTATTGGTCCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ESHRPFPSVYQALTACPPLMLFI*GGIGPV Trigger: AACAGGACCAATACCACCCAAGATGAACAGCATCAG...TGGAGGACAGGCAGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTGGCTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | CACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGCCTGTCCTCCAAGTCTCCTGATGCTGTTCATCTaGGGTGGTATTGGTCCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: HRPFPSVYQALTACPPSLLMLFI*GGIGPV Trigger: AACAGGACCAATACCACCCAAGATGAACAGCATCAG...GAGACTTGGAGGACAGGCAGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | ACGATGCAGGTAGAAAGCCACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTCCTGCTGGTCACAGCTaGTCCACTGATGCTGTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: TMQVESHRPFPSVYQALTPAGHS*STDAVH Trigger: ATGAACAGCATCAGTGGACAAGCTGTGACCAGCAGG...AGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTGGCTTTCTACCTGCATCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | GAAAGCCACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGCCTGTCCTCCAAAATTCCCAAACATGTaGGGCAGCGTGAGTGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: ESHRPFPSVYQALTACPPKFPNM*GSVSEV Trigger: TACCTCACTCACGCTGCCCAACATGTTTGGGAATTT...TGGAGGACAGGCAGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTGGCTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGAGAAAGGGCAGCCCCACACTTTCTTTTCAAAGACGATGGCCCAATACCAGCATCCACACAGTCCTaGATGCGCCAGTCCATGATG | + |
|
Preference number: 5 (lower is better) Translates to: CGERAAPHFLFKDDGPIPASTQS*MRQSMM Trigger: CATCATGGACTGGCGCATCAAGGACTGTGTGGATGC...TGGTATTGGGCCATCGTCTTTGAAAAGAAAGTGTGGGGCTGCCCTTTCTCCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | TTATTTCCTCTAAGACCTGTAAGAAACAGCATCAGGGAGGGAACCCGCCCTCCAGGCATTGGTGAGCTTTaGTACCTTGCGGTAGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LFPLRPVRNSIREGTRPPGIGEL*YLAVAW Trigger: CCACGCTACCGCAAGGTACAAAAGCTCACCAATGCC...TGGAGGGCGGGTTCCCTCCCTGATGCTGTTTCTTACAGGTCTTAGAGGAAATAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGTCTGTTCACTGATCCCATGAGTTTTCAGAAGGCAACTCCACAGAGGCTCCCCACAAGCAGGATGTaGGTCAGGGTGAAGGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: CGLFTDPMSFQKATPQRLPTSRM*VRVKAL Trigger: CAATGCCTTCACCCTGACCAACATCCTGCTTGTGGG...GAGCCTCTGTGGAGTTGCCTTCTGAAAACTCATGGGATCAGTGAACAGACCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS CCA 90 bp | GAAGGCATTGATGGCATTGGTGAGCTTTTGTACCTTGCGGTAGCGTaGTCTAGTGAACTTGGTGCTAGCCCCATCTCTGGCATCTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: EGIDGIGELLYLAVA*SSELGASPISGISK Trigger: TTTGGAGATGCCAGAGATGGGGCTAGCACCAAGTTCACTAGACCACGCTACCGCAAGGTACAAAAGCTCACCAATGCCATCAATGCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGTCTGTTCACTGATCCCATGAGTTTTCAGAAGGCAACTCCACAGAGGCTCCCTGCTGGTCACAGCTaGTCCACTGATGCTGTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: CGLFTDPMSFQKATPQRLPAGHS*STDAVH Trigger: ATGAACAGCATCAGTGGACAAGCTGTGACCAGCAGG...GAGCCTCTGTGGAGTTGCCTTCTGAAAACTCATGGGATCAGTGAACAGACCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | CACTTTCTTTTCAAAGACGATGGCCCAATACCACTGGAACGGGCACTGTCTTCAGGGGAGCAGAGGCTCTaGCGAAAAGGGACAGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: HFLFKDDGPIPLERALSSGEQRL*RKGTDF Trigger: AAAGTCTGTCCCTTTTCGCAAGAGCCTCTGCTCCCC...TGAAGACAGTGCCCGTTCCAGTGGTATTGGGCCATCGTCTTTGAAAAGAAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | TATAAATCCACAGAACCCGGCTCTATGAACACGATGCAGGTAGAAAGCCACAGGGGCATTGGTGAGCTTTaGTACCTTGCGGTAGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: YKSTEPGSMNTMQVESHRGIGEL*YLAVAW Trigger: CCACGCTACCGCAAGGTACAAAAGCTCACCAATGCC...CCTGTGGCTTTCTACCTGCATCGTGTTCATAGAGCCGGGTTCTGTGGATTTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | CACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTGCCTGTCCTCCAAGTCTCAAGGCATTGATGGCATaGGTGAGCTTTTGTACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: HRPFPSVYQALTACPPSLKALMA*VSFCTL Trigger: CAAGGTACAAAAGCTCACCAATGCCATCAATGCCTT...GAGACTTGGAGGACAGGCAGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | CCCGGCTCTATGAACACGATGCAGGTAGAAAGCCACAGGCCATTCCCTTCGGTTAAGGCATTGATGGCATaGGTGAGCTTTTGTACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PGSMNTMQVESHRPFPSVKALMA*VSFCTL Trigger: CAAGGTACAAAAGCTCACCAATGCCATCAATGCCTT...AACCGAAGGGAATGGCCTGTGGCTTTCTACCTGCATCGTGTTCATAGAGCCGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | CACTTTCTTTTCAAAGACGATGGCCCAATACCACTGGAACGGGCACTGTCTTCACCCACAAGCAGGATGTaGGTCAGGGTGAAGGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: HFLFKDDGPIPLERALSSPTSRM*VRVKAL Trigger: CAATGCCTTCACCCTGACCAACATCCTGCTTGTGGG...TGAAGACAGTGCCCGTTCCAGTGGTATTGGGCCATCGTCTTTGAAAAGAAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | TATAAATCCACAGAACCCGGCTCTATGAACACGATGCAGGTAGAAAGCCACAGGTGCAGGTGTAAGTTCTaGATGAGGCAGGCGATGCCG | + |
|
Preference number: 5 (lower is better) Translates to: YKSTEPGSMNTMQVESHRCRCKF*MRQAMP Trigger: CGGCATCGCCTGCCTCATCAAGAACTTACACCTGCA...CCTGTGGCTTTCTACCTGCATCGTGTTCATAGAGCCGGGTTCTGTGGATTTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | CACTTTCTTTTCAAAGACGATGGCCCAATACCACTGGAACGGGCACTGTCTTCATGCAGGTGTAAGTTCTaGATGAGGCAGGCGATGCCG | + |
|
Preference number: 5 (lower is better) Translates to: HFLFKDDGPIPLERALSSCRCKF*MRQAMP Trigger: CGGCATCGCCTGCCTCATCAAGAACTTACACCTGCA...TGAAGACAGTGCCCGTTCCAGTGGTATTGGGCCATCGTCTTTGAAAAGAAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | AAGGGCAGCCCCACACTTTCTTTTCAAAGACGATGGCCCAATACCACTGGAACGTGTGGGTCTACCAAATaGGTGGCATACTCTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KGSPTLSFQRRWPNTTGTCGSTK*VAYSLC Trigger: GCAGAGAGAGTATGCCACCAATTTGGTAGACCCACA...CGTTCCAGTGGTATTGGGCCATCGTCTTTGAAAAGAAAGTGTGGGGCTGCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | GTGTGGAGAAAGGGCAGCCCCACACTTTCTTTTCAAAGACGATGGCCCAATACCTGTGGGTCTACCAAATaGGTGGCATACTCTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VWRKGSPTLSFQRRWPNTCGSTK*VAYSLC Trigger: GCAGAGAGAGTATGCCACCAATTTGGTAGACCCACA...GGTATTGGGCCATCGTCTTTGAAAAGAAAGTGTGGGGCTGCCCTTTCTCCACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | AAGGGCAGCCCCACACTTTCTTTTCAAAGACGATGGCCCAATACCACTGGAACGAAATTCCCAAACATGTaGGGCAGCGTGAGTGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: KGSPTLSFQRRWPNTTGTKFPNM*GSVSEV Trigger: TACCTCACTCACGCTGCCCAACATGTTTGGGAATTT...CGTTCCAGTGGTATTGGGCCATCGTCTTTGAAAAGAAAGTGTGGGGCTGCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGTCTGTTCACTGATCCCATGAGTTTTCAGAAGGCAACTCCACAGAGGCTCGCTTCTGCAGGCCAGTaGAGAGCACAGTTCAAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: CGLFTDPMSFQKATPQRLASAGQ*RAQFKK Trigger: CTTTTTGAACTGTGCTCTCAACTGGCCTGCAGAAGC...GAGCCTCTGTGGAGTTGCCTTCTGAAAACTCATGGGATCAGTGAACAGACCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | ACGATGCAGGTAGAAAGCCACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTTTTGTCTCACGTTCCTaGCCACCAGTCACAATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: TMQVESHRPFPSVYQALTFVSRS*PPVTMN Trigger: GTTCATTGTGACTGGTGGCAAGGAACGTGAGACAAA...AGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTGGCTTTCTACCTGCATCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | TCCCTTTTTATTTCCTCTAAGACCTGTAAGAAACAGCATCAGGGAGGGAACCCGGCATCCACACAGTCCTaGATGCGCCAGTCCATGATG | + |
|
Preference number: 5 (lower is better) Translates to: SLFISSKTCKKQHQGGNPASTQS*MRQSMM Trigger: CATCATGGACTGGCGCATCAAGGACTGTGTGGATGC...CGGGTTCCCTCCCTGATGCTGTTTCTTACAGGTCTTAGAGGAAATAAAAAGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | TTATTTCCTCTAAGACCTGTAAGAAACAGCATCAGGGAGGGAACCCGCCCTCCATGTGGGTCTACCAAATaGGTGGCATACTCTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LFPLRPVRNSIREGTRPPCGSTK*VAYSLC Trigger: GCAGAGAGAGTATGCCACCAATTTGGTAGACCCACA...TGGAGGGCGGGTTCCCTCCCTGATGCTGTTTCTTACAGGTCTTAGAGGAAATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | CACTTTCTTTTCAAAGACGATGGCCCAATACCACTGGAACGGGCACTGTCTTCAGCTTCTGCAGGCCAGTaGAGAGCACAGTTCAAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: HFLFKDDGPIPLERALSSASAGQ*RAQFKK Trigger: CTTTTTGAACTGTGCTCTCAACTGGCCTGCAGAAGC...TGAAGACAGTGCCCGTTCCAGTGGTATTGGGCCATCGTCTTTGAAAAGAAAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGTCTGTTCACTGATCCCATGAGTTTTCAGAAGGCAACTCCACAGAGGCTCTTTGTCTCACGTTCCTaGCCACCAGTCACAATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: CGLFTDPMSFQKATPQRLFVSRS*PPVTMN Trigger: GTTCATTGTGACTGGTGGCAAGGAACGTGAGACAAA...GAGCCTCTGTGGAGTTGCCTTCTGAAAACTCATGGGATCAGTGAACAGACCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | CCTTCTCCTGCAGGAAAGGATGCAATATGCATGTGCGTAACATATATGTGTGCAGCATCCACACAGTCCTaGATGCGCCAGTCCATGATG | + |
|
Preference number: 5 (lower is better) Translates to: PSPAGKDAICMCVTYMCAASTQS*MRQSMM Trigger: CATCATGGACTGGCGCATCAAGGACTGTGTGGATGC...TGCACACATATATGTTACGCACATGCATATTGCATCCTTTCCTGCAGGAGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | ACGATGCAGGTAGAAAGCCACAGGCCATTCCCTTCGGTTTATCAGGCCTTGACTAAGGCATTGATGGCATaGGTGAGCTTTTGTACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TMQVESHRPFPSVYQALTKALMA*VSFCTL Trigger: CAAGGTACAAAAGCTCACCAATGCCATCAATGCCTT...AGTCAAGGCCTGATAAACCGAAGGGAATGGCCTGTGGCTTTCTACCTGCATCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | CCTTCTCCTGCAGGAAAGGATGCAATATGCATGTGCGTAACATATATGTGTGCATGCAGGTGTAAGTTCTaGATGAGGCAGGCGATGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PSPAGKDAICMCVTYMCACRCKF*MRQAMP Trigger: CGGCATCGCCTGCCTCATCAAGAACTTACACCTGCA...TGCACACATATATGTTACGCACATGCATATTGCATCCTTTCCTGCAGGAGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | CACTTTCTTTTCAAAGACGATGGCCCAATACCACTGGAACGGGCACTGTCTTCACTGATGCTGTTCATCTaGGGTGGTATTGGTCCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: HFLFKDDGPIPLERALSSLMLFI*GGIGPV Trigger: AACAGGACCAATACCACCCAAGATGAACAGCATCAG...TGAAGACAGTGCCCGTTCCAGTGGTATTGGGCCATCGTCTTTGAAAAGAAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | CACTTTCTTTTCAAAGACGATGGCCCAATACCACTGGAACGGGCACTGTCTTCAAAATTCCCAAACATGTaGGGCAGCGTGAGTGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: HFLFKDDGPIPLERALSSKFPNM*GSVSEV Trigger: TACCTCACTCACGCTGCCCAACATGTTTGGGAATTT...TGAAGACAGTGCCCGTTCCAGTGGTATTGGGCCATCGTCTTTGAAAAGAAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | TCCCTTTTTATTTCCTCTAAGACCTGTAAGAAACAGCATCAGGGAGGGAACCCGGCTTCTGCAGGCCAGTaGAGAGCACAGTTCAAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SLFISSKTCKKQHQGGNPASAGQ*RAQFKK Trigger: CTTTTTGAACTGTGCTCTCAACTGGCCTGCAGAAGC...CGGGTTCCCTCCCTGATGCTGTTTCTTACAGGTCTTAGAGGAAATAAAAAGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGTCTGTTCACTGATCCCATGAGTTTTCAGAAGGCAACTCCACAGAGGCTCAAGGCATTGATGGCATaGGTGAGCTTTTGTACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CGLFTDPMSFQKATPQRLKALMA*VSFCTL Trigger: CAAGGTACAAAAGCTCACCAATGCCATCAATGCCTT...GAGCCTCTGTGGAGTTGCCTTCTGAAAACTCATGGGATCAGTGAACAGACCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS-3UTR CAA 90 bp | CCTTCTCCTGCAGGAAAGGATGCAATATGCATGTGCGTAACATATATGTGTGCATTTGTCTCACGTTCCTaGCCACCAGTCACAATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PSPAGKDAICMCVTYMCAFVSRS*PPVTMN Trigger: GTTCATTGTGACTGGTGGCAAGGAACGTGAGACAAA...TGCACACATATATGTTACGCACATGCATATTGCATCCTTTCCTGCAGGAGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS CCA 72 bp | CCATCCACCAGCGCCTGCGGTACGCCTGCTTCAGCGTaGGAGCCATGGTGGCCGAGACTCTGTCCCCGACAA | + |
|
Preference number: 6 (lower is better) Translates to: PSTSACGTPASA*EPWWPRLCPRQ Trigger: TTGTCGGGGACAGAGTCTCGGCCACCATGGCTCCCACGCTGAAGCAGGCGTACCGCAGGCGCTGGTGGATGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028469.14 |
||
| CDS CCA 72 bp | CCATCCACCAGCGCCTGCGGTACGCCTGCTTCAGCGTaGGAGCCATGGTGGCCGAGACTCTGCAGAGAAACA | + |
|
Preference number: 6 (lower is better) Translates to: PSTSACGTPASA*EPWWPRLCRET Trigger: TGTTTCTCTGCAGAGTCTCGGCCACCATGGCTCCCACGCTGAAGCAGGCGTACCGCAGGCGCTGGTGGATGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111625.2 |
||
| CDS GCA 72 bp | AGGCCATTAGAGTGCAGGATGCGGCAAAGCAGGCACTaGCCACCAGTCGAAGAGGCCTGGGCCCAAAGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: RPLECRMRQSRH*PPVEEAWAQSG Trigger: ACCGCTTTGGGCCCAGGCCTCTTCGACTGGTGGGCAGTGCCTGCTTTGCCGCATCCTGCACTCTAATGGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 ENSMUST00000146816.8 |
||
| CDS TCA 72 bp | GGACGGGAACACAGCAGCGTAGAGACCTCCACAGGCTaGGTGGAAGAAACCGCGAACTATGGTATGCAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: GREHSSVETSTG*VEETANYGMQD Trigger: GTCCTGCATACCATAGTTCGCGGTTTCTTCCACTCAGCCTGTGGAGGTCTCTACGCTGCTGTGTTCCCGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS CCA 72 bp | GGTCACAGCTTGTCCACTGATGCTGTTCATCTTGGGTaGTATTGGTCCTGTTCTCAGCTGGGCACAGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GHSLSTDAVHLG*YWSCSQLGTGW Trigger: CCAGCCTGTGCCCAGCTGAGAACAGGACCAATACCACCCAAGATGAACAGCATCAGTGGACAAGCTGTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 ENSMUST00000146816.8 |
||
| CDS CAA 72 bp | ATGAGGCAGGCGATGCCGAAACCCACAAGCAGGATGTaGGTCAGGGTGAAGGCATTGATGGCATTGGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: MRQAMPKPTSRM*VRVKALMALVS Trigger: GCTCACCAATGCCATCAATGCCTTCACCCTGACCAACATCCTGCTTGTGGGTTTCGGCATCGCCTGCCTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS CAA 72 bp | TGCAGGACAAAGGCCAGCAACTGCAGGTGTAAGTTCTaGATGAGGCAGGCGATGCCGAAACCCACAAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: CRTKASNCRCKF*MRQAMPKPTSR Trigger: CCTGCTTGTGGGTTTCGGCATCGCCTGCCTCATCAAGAACTTACACCTGCAGTTGCTGGCCTTTGTCCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS CCA 72 bp | TCCAAAGGAAGCATTCTCATTCAGGGTGCCCTCCGTTaGAGCATCCACACAGTCCTTGATGCGCCAGTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SKGSILIQGALR*SIHTVLDAPVH Trigger: ATGGACTGGCGCATCAAGGACTGTGTGGATGCTCCAACGGAGGGCACCCTGAATGAGAATGCTTCCTTTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS CCA 72 bp | GATGGCATTGGTGAGCTTTTGTACCTTGCGGTAGCGTaGTCTAGTGAACTTGGTGCTAGCCCCATCTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: DGIGELLYLAVA*SSELGASPISG Trigger: GCCAGAGATGGGGCTAGCACCAAGTTCACTAGACCACGCTACCGCAAGGTACAAAAGCTCACCAATGCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS CCA 72 bp | GACCTCCACAGGCTGAGTGGAAGAAACCGCGAACTATaGTATGCAGGACAAAGGCCAGCAACTGCAGGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: DLHRLSGRNREL*YAGQRPATAGV Trigger: TACACCTGCAGTTGCTGGCCTTTGTCCTGCATACCATAGTTCGCGGTTTCTTCCACTCAGCCTGTGGAGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS CAA 90 bp | CAGGATGTTGGTCAGGGTGAAGGCATTGATGGCATTGGTGAGCTTTaGTACCTTGCGGTAGCGTGGTCTAGTGAACTTGGTGCTAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: QDVGQGEGIDGIGEL*YLAVAWSSELGASP Trigger: GGGGCTAGCACCAAGTTCACTAGACCACGCTACCGCAAGGTACAAAAGCTCACCAATGCCATCAATGCCTTCACCCTGACCAACATCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS GCA 72 bp | CCACAGGCTGAGTGGAAGAAACCGCGAACTATGGTATaGAGGACAAAGGCCAGCAACTGCAGGTGTAAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: PQAEWKKPRTMV*RTKASNCRCKF Trigger: GAACTTACACCTGCAGTTGCTGGCCTTTGTCCTGCATACCATAGTTCGCGGTTTCTTCCACTCAGCCTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS CAA 90 bp | ACTATGGTATGCAGGACAAAGGCCAGCAACTGCAGGTGTAAGTTCTaGATGAGGCAGGCGATGCCGAAACCCACAAGCAGGATGTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: TMVCRTKASNCRCKF*MRQAMPKPTSRMLV Trigger: GACCAACATCCTGCTTGTGGGTTTCGGCATCGCCTGCCTCATCAAGAACTTACACCTGCAGTTGCTGGCCTTTGTCCTGCATACCATAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS CAA 90 bp | AAGTTCTTGATGAGGCAGGCGATGCCGAAACCCACAAGCAGGATGTaGGTCAGGGTGAAGGCATTGATGGCATTGGTGAGCTTTTGTACC | + |
|
Preference number: 6 (lower is better) Translates to: KFLMRQAMPKPTSRM*VRVKALMALVSFCT Trigger: GGTACAAAAGCTCACCAATGCCATCAATGCCTTCACCCTGACCAACATCCTGCTTGTGGGTTTCGGCATCGCCTGCCTCATCAAGAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS CCA 72 bp | AGCTTGTCCACTGATGCTGTTCATCTTGGGTGGTATTaGTCCTGTTCTCAGCTGGGCACAGGCTGGAATAGA | + |
|
Preference number: 6 (lower is better) Translates to: SLSTDAVHLGWY*SCSQLGTGWNR Trigger: TCTATTCCAGCCTGTGCCCAGCTGAGAACAGGACCAATACCACCCAAGATGAACAGCATCAGTGGACAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 ENSMUST00000146816.8 |
||
| CDS CAA 72 bp | GGTCAGGGTGAAGGCATTGATGGCATTGGTGAGCTTTaGTACCTTGCGGTAGCGTGGTCTAGTGAACTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GQGEGIDGIGEL*YLAVAWSSELG Trigger: ACCAAGTTCACTAGACCACGCTACCGCAAGGTACAAAAGCTCACCAATGCCATCAATGCCTTCACCCTGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
||
| CDS TCA 72 bp | TTGAGCATCTTTTCCTGCTGGTCACAGCTTGTCCACTaGTGCTGTTCATCTTGGGTGGTATTGGTCCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: LSIFSCWSQLVH*CCSSWVVLVLF Trigger: GAACAGGACCAATACCACCCAAGATGAACAGCATCAGTGGACAAGCTGTGACCAGCAGGAAAAGATGCTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 ENSMUST00000146816.8 |
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| CDS CCA 72 bp | AGCAAATCCATTCAAGGACAGTGCCAGGAATATCAATaGAGACAAAACTTCAGTGTCCCTGGAGGCCAAGGC | + |
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Preference number: 6 (lower is better) Translates to: SKSIQGQCQEYQ*RQNFSVPGGQG Trigger: GCCTTGGCCTCCAGGGACACTGAAGTTTTGTCTCCATTGATATTCCTGGCACTGTCCTTGAATGGATTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| CDS CCA 72 bp | CTATGTAGCCACCTTCGAAGTATTGAGCACCTTCTGTaGGTCTACCAAATTGGTGGCATACTCTCTCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: LCSHLRSIEHLL*VYQIGGILSLQ Trigger: CTGCAGAGAGAGTATGCCACCAATTTGGTAGACCCACAGAAGGTGCTCAATACTTCGAAGGTGGCTACATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| CDS CAA 72 bp | AGGGCCATGAAAGTGGATCGCAAATTCCCAAACATGTaGGGCAGCGTGAGTGAGGTAAACGTTAAGCAGATG | + |
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Preference number: 6 (lower is better) Translates to: RAMKVDRKFPNM*GSVSEVNVKQM Trigger: CATCTGCTTAACGTTTACCTCACTCACGCTGCCCAACATGTTTGGGAATTTGCGATCCACTTTCATGGCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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| CDS CAA 90 bp | CCAATCATGAGGGCCATGAAAGTGGATCGCAAATTCCCAAACATGTaGGGCAGCGTGAGTGAGGTAAACGTTAAGCAGATGCCAGCAAAT | + |
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Preference number: 6 (lower is better) Translates to: PIMRAMKVDRKFPNM*GSVSEVNVKQMPAN Trigger: ATTTGCTGGCATCTGCTTAACGTTTACCTCACTCACGCTGCCCAACATGTTTGGGAATTTGCGATCCACTTTCATGGCCCTCATGATTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028469.14 ENSMUST00000111624.8 ENSMUST00000111625.2 ENSMUST00000121114.8 |
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