Pregenerated sensors for SLC41A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034591Ensembl transcript IDs: ENSMUST00000039956.6, ENSMUST00000154926.2
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACGCACTCCATCTTGGGCCCACAAACACAGCTCAGCACACCTTCTaGTTTAATCACGGTTTTCTAAATCGGATCAACCTTTTTCAACAC | + |
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Preference number: 1 (lower is better) Translates to: HALHLGPTNTAQHTF*FNHGFLNRINLFQH Trigger: GTGTTGAAAAAGGTTGATCCGATTTAGAAAACCGTGATTAAAGCAGAAGGTGTGCTGAGCTGTGTTTGTGGGCCCAAGATGGAGTGCGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| 3UTR GCA 90 bp | TTTGCACATCTGGGGGTGGGACACACATGTGAAGAGTCTGTTCCCTaGATAGCTGTGAAATCTTACAAATGTCACTCCTCTGTATTTCCC | + |
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Preference number: 1 (lower is better) Translates to: FAHLGVGHTCEESVP*IAVKSYKCHSSVFP Trigger: GGGAAATACAGAGGAGTGACATTTGTAAGATTTCACAGCTATGCAGGGAACAGACTCTTCACATGTGTGTCCCACCCCCAGATGTGCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| 3UTR TCA 90 bp | ACAAATTCCTTAAAAAGTACATTAAGGCCATTTACGGAGTCAGGGTaGACTGCAGACTACCCTGGCATAAGTTACAGGACAGATGAAGAG | + |
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Preference number: 1 (lower is better) Translates to: TNSLKSTLRPFTESG*TADYPGISYRTDEE Trigger: CTCTTCATCTGTCCTGTAACTTATGCCAGGGTAGTCTGCAGTTCACCCTGACTCCGTAAATGGCCTTAATGTACTTTTTAAGGAATTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| 3UTR CCA 90 bp | GGCTGTGTGTATAATGTGCCTGGTAAGTTAGTGGGAAACCAGTTTTaGAAAGCAGGGTTTGTGTGGTATAAAAATATTATTCATTTACCT | + |
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Preference number: 1 (lower is better) Translates to: GCVYNVPGKLVGNQF*KAGFVWYKNIIHLP Trigger: AGGTAAATGAATAATATTTTTATACCACACAAACCCTGCTTTCCAAAACTGGTTTCCCACTAACTTACCAGGCACATTATACACACAGCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| 3UTR CAA 90 bp | TCTCGGGCCTGTCCCTCACACATGCGCACACGCACGCACTCCATCTaGGGCCCACAAACACAGCTCAGCACACCTTCTGCTTTAATCACG | + |
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Preference number: 2 (lower is better) Translates to: SRACPSHMRTRTHSI*GPQTQLSTPSALIT Trigger: CGTGATTAAAGCAGAAGGTGTGCTGAGCTGTGTTTGTGGGCCCAAGATGGAGTGCGTGCGTGTGCGCATGTGTGAGGGACAGGCCCGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| 3UTR-3UTR TCA 90 bp | AACCTTAGCTCCCAGGGAGGAAGGCCTAATGAACACTTAGGGACGTTCAGCTGGAAGTTACAGGACAGATaGAGAGCTTTGGGGAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: NLSSQGGRPNEHLGTFSWKLQDR*RALGRG Trigger: GCCCCTCCCCAAAGCTCTTCATCTGTCCTGTAACTT...CCAGCTGAACGTCCCTAAGTGTTCATTAGGCCTTCCTCCCTGGGAGCTAAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| 3UTR-3UTR TCA 90 bp | AAGCTACCTGCTAGTTCTTCACCAGCACAACCTCGCCATGACAATCAACGTCATTTTACGGAGTCAGGGTaGACTGCAGACTACCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: KLPASSSPAQPRHDNQRHFTESG*TADYPG Trigger: GCCAGGGTAGTCTGCAGTTCACCCTGACTCCGTAAA...ATGACGTTGATTGTCATGGCGAGGTTGTGCTGGTGAAGAACTAGCAGGTAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| 3UTR-3UTR CCA 90 bp | AAGCTACCTGCTAGTTCTTCACCAGCACAACCTCGCCATGACAATCAACGTCATACAGATGAAGAGCTTTaGGGAGGGGCAGCAATGGCT | + |
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Preference number: 2 (lower is better) Translates to: KLPASSSPAQPRHDNQRHTDEEL*GGAAMA Trigger: AGCCATTGCTGCCCCTCCCCAAAGCTCTTCATCTGT...ATGACGTTGATTGTCATGGCGAGGTTGTGCTGGTGAAGAACTAGCAGGTAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| 3UTR-3UTR GCA 90 bp | AACTTAAACTTTATGCTTATTTTGTCAGAATGGTCACTCCGTGACACTAACTCTAGGGGCAGCAATGGCTaGCTGTATCCTTCCCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: NLNFMLILSEWSLRDTNSRGSNG*LYPSPV Trigger: CACAGGGGAAGGATACAGGCAGCCATTGCTGCCCCT...AGAGTTAGTGTCACGGAGTGACCATTCTGACAAAATAAGCATAAAGTTTAAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| 3UTR-3UTR TCA 90 bp | CTTACATACTTACACAGAGACTTTCAAAGATCTGTAATTAACAGTGCATATCCCTGGCACTCTGTAGTGTaGCACAGCTGTAAGACAAGG | + |
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Preference number: 2 (lower is better) Translates to: LTYLHRDFQRSVINSAYPWHSVV*HSCKTR Trigger: CCTTGTCTTACAGCTGTGTCACACTACAGAGTGCCA...GGGATATGCACTGTTAATTACAGATCTTTGAAAGTCTCTGTGTAAGTATGTAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| 3UTR CCA 72 bp | GTCCCTCACACATGCGCACACGCACGCACTCCATCTTaGGCCCACAAACACAGCTCAGCACACCTTCTGCTT | + |
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Preference number: 3 (lower is better) Translates to: VPHTCAHARTPS*AHKHSSAHLLL Trigger: AAGCAGAAGGTGTGCTGAGCTGTGTTTGTGGGCCCAAGATGGAGTGCGTGCGTGTGCGCATGTGTGAGGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| 3UTR-3UTR CAA 90 bp | GGCCTGTCCCTCACACATGCGCACACGCACGCACTCCATCTTGGGCCCACAAACGTAAAAGTGAGCTGGTaGTTATGTTCAGTGGGAGGG | + |
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Preference number: 3 (lower is better) Translates to: GLSLTHAHTHALHLGPTNVKVSW*LCSVGG Trigger: CCCTCCCACTGAACATAACAACCAGCTCACTTTTAC...GTTTGTGGGCCCAAGATGGAGTGCGTGCGTGTGCGCATGTGTGAGGGACAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| 3UTR GCA 72 bp | GATAAAACACAGACAGGAGTCTCCATTCAACCCACCTaGCAGGCGAGGCTGTCAGCACCACACACGGTAGCT | + |
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Preference number: 3 (lower is better) Translates to: DKTQTGVSIQPT*QARLSAPHTVA Trigger: AGCTACCGTGTGTGGTGCTGACAGCCTCGCCTGGCAGGTGGGTTGAATGGAGACTCCTGTCTGTGTTTTATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| 3UTR TCA 72 bp | AACTGCAGACTACCCTGGCATAAGTTACAGGACAGATaGAGAGCTTTGGGGAGGGGCAGCAATGGCTGCCTG | + |
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Preference number: 3 (lower is better) Translates to: NCRLPWHKLQDR*RALGRGSNGCL Trigger: CAGGCAGCCATTGCTGCCCCTCCCCAAAGCTCTTCATCTGTCCTGTAACTTATGCCAGGGTAGTCTGCAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| 3UTR TCA 72 bp | TGGCCCCCGTCACATCAGTCATGGCACTCTGTAGTGTaGCACAGCTGTAAGACAAGGCTAACACTCCCTTGC | + |
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Preference number: 3 (lower is better) Translates to: WPPSHQSWHSVV*HSCKTRLTLPC Trigger: GCAAGGGAGTGTTAGCCTTGTCTTACAGCTGTGTCACACTACAGAGTGCCATGACTGATGTGACGGGGGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| 3UTR CCA 72 bp | TACCCTGGCATAAGTTACAGGACAGATGAAGAGCTTTaGGGAGGGGCAGCAATGGCTGCCTGTATCCTTCCC | + |
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Preference number: 3 (lower is better) Translates to: YPGISYRTDEEL*GGAAMAACILP Trigger: GGGAAGGATACAGGCAGCCATTGCTGCCCCTCCCCAAAGCTCTTCATCTGTCCTGTAACTTATGCCAGGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| 3UTR GCA 72 bp | CACGGTAGCTCACACATCTTCCCGTGCTTAGGAATATaGCTAACACTGCCAACCAGGCTAACACTGGGGCTT | + |
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Preference number: 3 (lower is better) Translates to: HGSSHIFPCLGI*LTLPTRLTLGL Trigger: AAGCCCCAGTGTTAGCCTGGTTGGCAGTGTTAGGCATATTCCTAAGCACGGGAAGATGTGTGAGCTACCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| 3UTR-3UTR CAA 90 bp | ACACGCACGCACTCCATCTTGGGCCCACAAACACAGCTCAGCACACCTTCTGCTAAGGCTAACACTCCCTaGCCTCTAACTGTGCATTAT | + |
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Preference number: 3 (lower is better) Translates to: TRTHSILGPQTQLSTPSAKANTP*PLTVHY Trigger: ATAATGCACAGTTAGAGGCAAGGGAGTGTTAGCCTT...AGCAGAAGGTGTGCTGAGCTGTGTTTGTGGGCCCAAGATGGAGTGCGTGCGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| 3UTR-3UTR CAA 90 bp | CCCACCACTGACAGACGTTTAAAAGATGCATTTGGCTACATCACAGACAATCTCAGTGGGAAACCAGTTTaGGAAAGCAGGGTTTGTGTG | + |
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Preference number: 3 (lower is better) Translates to: PTTDRRLKDAFGYITDNLSGKPV*ESRVCV Trigger: CACACAAACCCTGCTTTCCAAAACTGGTTTCCCACT...GAGATTGTCTGTGATGTAGCCAAATGCATCTTTTAAACGTCTGTCAGTGGTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| 3UTR GCA 72 bp | CATCTTGGGCCCACAAACACAGCTCAGCACACCTTCTaGTTTAATCACGGTTTTCTAAATCGGATCAACCTT | + |
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Preference number: 3 (lower is better) Translates to: HLGPTNTAQHTF*FNHGFLNRINL Trigger: AAGGTTGATCCGATTTAGAAAACCGTGATTAAAGCAGAAGGTGTGCTGAGCTGTGTTTGTGGGCCCAAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| 3UTR GCA 72 bp | TTAACGGCCTTGAACGATTGCCGGGCAATTTTAAAGTaGTTACTACTGAATAGCCAGGGGTTAGGTGCTTAC | + |
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Preference number: 3 (lower is better) Translates to: LTALNDCRAILK*LLLNSQGLGAY Trigger: GTAAGCACCTAACCCCTGGCTATTCAGTAGTAAGCACTTTAAAATTGCCCGGCAATCGTTCAAGGCCGTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| 3UTR TCA 72 bp | TTAAAAAGTACATTAAGGCCATTTACGGAGTCAGGGTaGACTGCAGACTACCCTGGCATAAGTTACAGGACA | + |
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Preference number: 3 (lower is better) Translates to: LKSTLRPFTESG*TADYPGISYRT Trigger: TGTCCTGTAACTTATGCCAGGGTAGTCTGCAGTTCACCCTGACTCCGTAAATGGCCTTAATGTACTTTTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| 3UTR-3UTR CAA 90 bp | AACTTAAACTTTATGCTTATTTTGTCAGAATGGTCACTCCGTGACACTAACTCTCACAAATACCATTCATaGTGGTTTCGGCACAAATTC | + |
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Preference number: 3 (lower is better) Translates to: NLNFMLILSEWSLRDTNSHKYHS*WFRHKF Trigger: GAATTTGTGCCGAAACCACAATGAATGGTATTTGTG...AGAGTTAGTGTCACGGAGTGACCATTCTGACAAAATAAGCATAAAGTTTAAGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| 3UTR CCA 72 bp | TATAATGTGCCTGGTAAGTTAGTGGGAAACCAGTTTTaGAAAGCAGGGTTTGTGTGGTATAAAAATATTATT | + |
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Preference number: 3 (lower is better) Translates to: YNVPGKLVGNQF*KAGFVWYKNII Trigger: AATAATATTTTTATACCACACAAACCCTGCTTTCCAAAACTGGTTTCCCACTAACTTACCAGGCACATTATA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR CCA 90 bp | ATGCGCACACGCACGCACTCCATCTTGGGCCCACAAACACAGCTCAGCACACCTACTTGGGGCTGCAGCTaGCTGGAGTGTGCCCACTGC | + |
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Preference number: 4 (lower is better) Translates to: MRTRTHSILGPQTQLSTPTWGCS*LECAHC Trigger: GCAGTGGGCACACTCCAGCCAGCTGCAGCCCCAAGT...AGGTGTGCTGAGCTGTGTTTGTGGGCCCAAGATGGAGTGCGTGCGTGTGCGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR GCA 90 bp | AACCTTAGCTCCCAGGGAGGAAGGCCTAATGAACACTTAGGGACGTTCAGCTGGCAGCTGGCTGGAGTGTaGCCACTGCTGCTGCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: NLSSQGGRPNEHLGTFSWQLAGV*PLLLLW Trigger: CCACAGCAGCAGCAGTGGGCACACTCCAGCCAGCTG...CCAGCTGAACGTCCCTAAGTGTTCATTAGGCCTTCCTCCCTGGGAGCTAAGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| 3UTR CAA 72 bp | TGTCCCTCACACATGCGCACACGCACGCACTCCATCTaGGGCCCACAAACACAGCTCAGCACACCTTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: CPSHMRTRTHSI*GPQTQLSTPSA Trigger: AGCAGAAGGTGTGCTGAGCTGTGTTTGTGGGCCCAAGATGGAGTGCGTGCGTGTGCGCATGTGTGAGGGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR CCA 90 bp | ACACGCACGCACTCCATCTTGGGCCCACAAACACAGCTCAGCACACCTTCTGCTCCACTGCTGCTGCTGTaGAAGGCTTGCTCTGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: TRTHSILGPQTQLSTPSAPLLLL*KACSEN Trigger: GTTCTCAGAGCAAGCCTTCCACAGCAGCAGCAGTGG...AGCAGAAGGTGTGCTGAGCTGTGTTTGTGGGCCCAAGATGGAGTGCGTGCGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR TCA 90 bp | ACTACTTTGTCTCTGTCTTTCTCGGGCCTGTCCCTCACACATGCGCACACGCACGTGGAAGGCTTGCTCTaGGAACTCGTGGTAGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: TTLSLSFSGLSLTHAHTHVEGLL*ELVVVQ Trigger: CTGGACTACCACGAGTTCTCAGAGCAAGCCTTCCAC...GTGCGTGTGCGCATGTGTGAGGGACAGGCCCGAGAAAGACAGAGACAAAGTAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR CCA 90 bp | AAGCTACCTGCTAGTTCTTCACCAGCACAACCTCGCCATGACAATCAACGTCATGGGGCTGCAGCTGGCTaGAGTGTGCCCACTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: KLPASSSPAQPRHDNQRHGAAAG*SVPTAA Trigger: AGCAGCAGTGGGCACACTCCAGCCAGCTGCAGCCCC...ATGACGTTGATTGTCATGGCGAGGTTGTGCTGGTGAAGAACTAGCAGGTAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR CCA 90 bp | GGCCTGTCCCTCACACATGCGCACACGCACGCACTCCATCTTGGGCCCACAAACATGAGCCAGAGAAAATaGAAGCTTAAGGCCAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: GLSLTHAHTHALHLGPTNMSQRK*KLKASR Trigger: TCTGCTGGCCTTAAGCTTCCATTTTCTCTGGCTCAT...GTTTGTGGGCCCAAGATGGAGTGCGTGCGTGTGCGCATGTGTGAGGGACAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR GCA 90 bp | ATGCGCACACGCACGCACTCCATCTTGGGCCCACAAACACAGCTCAGCACACCTCGTTGTCAGGGTTTATaGCAGTCTTCTTGGAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: MRTRTHSILGPQTQLSTPRCQGL*QSSWSQ Trigger: TTGGCTCCAAGAAGACTGGCATAAACCCTGACAACG...AGGTGTGCTGAGCTGTGTTTGTGGGCCCAAGATGGAGTGCGTGCGTGTGCGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR CCA 90 bp | AACCTTAGCTCCCAGGGAGGAAGGCCTAATGAACACTTAGGGACGTTCAGCTGGCATAGTCATCGTACTTaGGGCTGCAGCTGGCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: NLSSQGGRPNEHLGTFSWHSHRT*GCSWLE Trigger: CTCCAGCCAGCTGCAGCCCCAAGTACGATGACTATG...CCAGCTGAACGTCCCTAAGTGTTCATTAGGCCTTCCTCCCTGGGAGCTAAGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR CCA 90 bp | ACGCACTCCATCTTGGGCCCACAAACACAGCTCAGCACACCTTCTGCTTTAATCCCTGTAACATGGCGGTaGTTTCCGAAGCCTCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: THSILGPQTQLSTPSALIPVTWR*FPKPPS Trigger: GGAGGGAGGCTTCGGAAACCACCGCCATGTTACAGG...GATTAAAGCAGAAGGTGTGCTGAGCTGTGTTTGTGGGCCCAAGATGGAGTGCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR CCA 90 bp | ACACGCACGCACTCCATCTTGGGCCCACAAACACAGCTCAGCACACCTTCTGCTCACTGTCCTGGTAGCTaGGTGCTTGGCAGCTATTAT | + |
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Preference number: 4 (lower is better) Translates to: TRTHSILGPQTQLSTPSAHCPGS*VLGSYY Trigger: ATAATAGCTGCCAAGCACCCAGCTACCAGGACAGTG...AGCAGAAGGTGTGCTGAGCTGTGTTTGTGGGCCCAAGATGGAGTGCGTGCGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR TCA 90 bp | GAATGGTCACTCCGTGACACTAACTCTCCAAAGGAGAGATCCTGTAATTCATTCGACAGGCTCCCAGCCTaGGTGGAGCACTGTCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: EWSLRDTNSPKERSCNSFDRLPA*VEHCPG Trigger: ACCAGGACAGTGCTCCACTCAGGCTGGGAGCCTGTC...GAATGAATTACAGGATCTCTCCTTTGGAGAGTTAGTGTCACGGAGTGACCATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR GCA 90 bp | ACTACTTTGTCTCTGTCTTTCTCGGGCCTGTCCCTCACACATGCGCACACGCACGTCCTGGTAGCTGGGTaGTTGGCAGCTATTATAATC | + |
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Preference number: 4 (lower is better) Translates to: TTLSLSFSGLSLTHAHTHVLVAG*LAAIII Trigger: GATTATAATAGCTGCCAAGCACCCAGCTACCAGGAC...GTGCGTGTGCGCATGTGTGAGGGACAGGCCCGAGAAAGACAGAGACAAAGTAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR TCA 90 bp | GAATGGTCACTCCGTGACACTAACTCTCCAAAGGAGAGATCCTGTAATTCATTCCGATCCACAGCAGGGTaGACACCTGCAGCACAGCAG | + |
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Preference number: 4 (lower is better) Translates to: EWSLRDTNSPKERSCNSFRSTAG*TPAAQQ Trigger: CTGCTGTGCTGCAGGTGTTCACCCTGCTGTGGATCG...GAATGAATTACAGGATCTCTCCTTTGGAGAGTTAGTGTCACGGAGTGACCATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR CCA 90 bp | CCCACCACTGACAGACGTTTAAAAGATGCATTTGGCTACATCACAGACAATCTCGGCTCCCAGCCTGAGTaGAGCACTGTCCTGGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: PTTDRRLKDAFGYITDNLGSQPE*STVLVA Trigger: AGCTACCAGGACAGTGCTCCACTCAGGCTGGGAGCC...GAGATTGTCTGTGATGTAGCCAAATGCATCTTTTAAACGTCTGTCAGTGGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR TCA 90 bp | GAATGGTCACTCCGTGACACTAACTCTCCAAAGGAGAGATCCTGTAATTCATTCGCTCTGATCTCTTGCTaGAGGTCTGTGCTGCACCCG | + |
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Preference number: 4 (lower is better) Translates to: EWSLRDTNSPKERSCNSFALISC*RSVLHP Trigger: CGGGTGCAGCACAGACCTTCAGCAAGAGATCAGAGC...GAATGAATTACAGGATCTCTCCTTTGGAGAGTTAGTGTCACGGAGTGACCATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR TCA 90 bp | ACTACTTTGTCTCTGTCTTTCTCGGGCCTGTCCCTCACACATGCGCACACGCACCAGGAGTACAAACCCTaGCTTATCCAAGCTAATATG | + |
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Preference number: 4 (lower is better) Translates to: TTLSLSFSGLSLTHAHTHQEYKP*LIQANM Trigger: CATATTAGCTTGGATAAGTCAGGGTTTGTACTCCTG...GTGCGTGTGCGCATGTGTGAGGGACAGGCCCGAGAAAGACAGAGACAAAGTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR GCA 90 bp | TATAATGTGCCTGGTAAGTTAGTGGGAAACCAGTTTTGGAAAGCAGGGTTTGTGCATCGTACTTGGGGCTaGAGCTGGCTGGAGTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: YNVPGKLVGNQFWKAGFVHRTWG*SWLECA Trigger: GGCACACTCCAGCCAGCTGCAGCCCCAAGTACGATG...CACAAACCCTGCTTTCCAAAACTGGTTTCCCACTAACTTACCAGGCACATTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR GCA 90 bp | GAATGGTCACTCCGTGACACTAACTCTCCAAAGGAGAGATCCTGTAATTCATTCAGCAGGGTGAACACCTaGAGCACAGCAGCAAACAGG | + |
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Preference number: 4 (lower is better) Translates to: EWSLRDTNSPKERSCNSFSRVNT*STAANR Trigger: CCTGTTTGCTGCTGTGCTGCAGGTGTTCACCCTGCT...GAATGAATTACAGGATCTCTCCTTTGGAGAGTTAGTGTCACGGAGTGACCATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR CCA 90 bp | AACCTTAGCTCCCAGGGAGGAAGGCCTAATGAACACTTAGGGACGTTCAGCTGGGTAATACTTCCCTTCTaGAATCCAGCCCAGTATGAT | + |
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Preference number: 4 (lower is better) Translates to: NLSSQGGRPNEHLGTFSWVILPF*NPAQYD Trigger: ATCATACTGGGCTGGATTCCAGAAGGGAAGTATTAC...CCAGCTGAACGTCCCTAAGTGTTCATTAGGCCTTCCTCCCTGGGAGCTAAGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR GCA 90 bp | ATGCCTAACACTGCCAACCAGGCTAACACTGGGGCTTACTCTGCATACTCTTTGCTATGTCCAAAACCATaGCAGCAGAAACCGTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: MPNTANQANTGAYSAYSLLCPKP*QQKPFQ Trigger: TTGGAACGGTTTCTGCTGGCATGGTTTTGGACATAG...CAAAGAGTATGCAGAGTAAGCCCCAGTGTTAGCCTGGTTGGCAGTGTTAGGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR TCA 90 bp | AGAATAAACAAATCTACTAAAGGGTTAGCTGTTGAGAACTCGCTGAGCAGAGATGCAGTAGAGATGCGATaGAGGCCGTTGCCACACTGC | + |
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Preference number: 4 (lower is better) Translates to: RINKSTKGLAVENSLSRDAVEMR*RPLPHC Trigger: GCAGTGTGGCAACGGCCTTCATCGCATCTCTACTGC...ATCTCTGCTCAGCGAGTTCTCAACAGCTAACCCTTTAGTAGATTTGTTTATTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR TCA 90 bp | CCCACCACTGACAGACGTTTAAAAGATGCATTTGGCTACATCACAGACAATCTCGAAATCCTGCTAGCCTaGATGGCCACCAAATTGCCA | + |
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Preference number: 4 (lower is better) Translates to: PTTDRRLKDAFGYITDNLEILLA*MATKLP Trigger: TGGCAATTTGGTGGCCATTCAGGCTAGCAGGATTTC...GAGATTGTCTGTGATGTAGCCAAATGCATCTTTTAAACGTCTGTCAGTGGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR TCA 90 bp | GAATGGTCACTCCGTGACACTAACTCTCCAAAGGAGAGATCCTGTAATTCATTCCATCTCGGTCTCCAATaGGCCAGAGAAAATGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: EWSLRDTNSPKERSCNSFHLGLQ*ARENGS Trigger: GCTTCCATTTTCTCTGGCTCATTGGAGACCGAGATG...GAATGAATTACAGGATCTCTCCTTTGGAGAGTTAGTGTCACGGAGTGACCATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR CCA 90 bp | ATGCCTAACACTGCCAACCAGGCTAACACTGGGGCTTACTCTGCATACTCTTTGAATCCCAACCAAGTTTaGGTCAGATACAGTTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: MPNTANQANTGAYSAYSLNPNQV*VRYSCV Trigger: GACACAACTGTATCTGACCCAAACTTGGTTGGGATT...CAAAGAGTATGCAGAGTAAGCCCCAGTGTTAGCCTGGTTGGCAGTGTTAGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR CCA 90 bp | AAGCTACCTGCTAGTTCTTCACCAGCACAACCTCGCCATGACAATCAACGTCATGATCCCGTTGATAACTaGCGTGTAAACAACAATCCC | + |
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Preference number: 4 (lower is better) Translates to: KLPASSSPAQPRHDNQRHDPVDN*RVNNNP Trigger: GGGATTGTTGTTTACACGCCAGTTATCAACGGGATC...ATGACGTTGATTGTCATGGCGAGGTTGTGCTGGTGAAGAACTAGCAGGTAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR CCA 90 bp | TATAATGTGCCTGGTAAGTTAGTGGGAAACCAGTTTTGGAAAGCAGGGTTTGTGTTTCTCCAGAAGCGATaGACCATCCAGTCGGCGATC | + |
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Preference number: 4 (lower is better) Translates to: YNVPGKLVGNQFWKAGFVFLQKR*TIQSAI Trigger: GATCGCCGACTGGATGGTCCATCGCTTCTGGAGAAA...CACAAACCCTGCTTTCCAAAACTGGTTTCCCACTAACTTACCAGGCACATTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR GCA 90 bp | GAATGGTCACTCCGTGACACTAACTCTCCAAAGGAGAGATCCTGTAATTCATTCGTAGTTCTCCGGGGATaGTATGTAAATGGAGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: EWSLRDTNSPKERSCNSFVVLRG*YVNGGR Trigger: CCTACCTCCATTTACATAGCATCCCCGGAGAACTAC...GAATGAATTACAGGATCTCTCCTTTGGAGAGTTAGTGTCACGGAGTGACCATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR TCA 90 bp | GAATGGTCACTCCGTGACACTAACTCTCCAAAGGAGAGATCCTGTAATTCATTCGAAGTATGGAATGGCTaGGGTAATACTTCCCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: EWSLRDTNSPKERSCNSFEVWNG*GNTSLL Trigger: CAGAAGGGAAGTATTACCTCAGCCATTCCATACTTC...GAATGAATTACAGGATCTCTCCTTTGGAGAGTTAGTGTCACGGAGTGACCATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR CCA 90 bp | CCCACCACTGACAGACGTTTAAAAGATGCATTTGGCTACATCACAGACAATCTCAAAAGCCAACCACTGTaGCCTGAACCTGCTTTAAAG | + |
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Preference number: 4 (lower is better) Translates to: PTTDRRLKDAFGYITDNLKSQPL*PEPALK Trigger: CTTTAAAGCAGGTTCAGGCCACAGTGGTTGGCTTTT...GAGATTGTCTGTGATGTAGCCAAATGCATCTTTTAAACGTCTGTCAGTGGTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR GCA 90 bp | AACTTAAACTTTATGCTTATTTTGTCAGAATGGTCACTCCGTGACACTAACTCTAGGCCGTTGCCACACTaGTGGAGCACAGAAGTATGG | + |
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Preference number: 4 (lower is better) Translates to: NLNFMLILSEWSLRDTNSRPLPH*WSTEVW Trigger: CCATACTTCTGTGCTCCAGCAGTGTGGCAACGGCCT...AGAGTTAGTGTCACGGAGTGACCATTCTGACAAAATAAGCATAAAGTTTAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR CCA 90 bp | AGAATAAACAAATCTACTAAAGGGTTAGCTGTTGAGAACTCGCTGAGCAGAGATCCGTTGCCACACTGCTaGAGCACAGAAGTATGGAAT | + |
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Preference number: 4 (lower is better) Translates to: RINKSTKGLAVENSLSRDPLPHC*STEVWN Trigger: ATTCCATACTTCTGTGCTCCAGCAGTGTGGCAACGG...ATCTCTGCTCAGCGAGTTCTCAACAGCTAACCCTTTAGTAGATTTGTTTATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR CCA 90 bp | TATAATGTGCCTGGTAAGTTAGTGGGAAACCAGTTTTGGAAAGCAGGGTTTGTGAAGAGCAGGAGAACCTaGGCAGACTTATTGTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: YNVPGKLVGNQFWKAGFVKSRRT*ADLLFT Trigger: AGTGAACAATAAGTCTGCCCAGGTTCTCCTGCTCTT...CACAAACCCTGCTTTCCAAAACTGGTTTCCCACTAACTTACCAGGCACATTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR CCA 90 bp | TATAATGTGCCTGGTAAGTTAGTGGGAAACCAGTTTTGGAAAGCAGGGTTTGTGGATGGAGAAACTGTCTaGGTCCTTTCCTTTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YNVPGKLVGNQFWKAGFVDGETV*VLSFSP Trigger: TGGAGAAAAGGAAAGGACCCAGACAGTTTCTCCATC...CACAAACCCTGCTTTCCAAAACTGGTTTCCCACTAACTTACCAGGCACATTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR TCA 90 bp | GAATGGTCACTCCGTGACACTAACTCTCCAAAGGAGAGATCCTGTAATTCATTCAAGCCAAGTTGCCAATaGTTAGATTCCACTTCTCAA | + |
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Preference number: 4 (lower is better) Translates to: EWSLRDTNSPKERSCNSFKPSCQ*LDSTSQ Trigger: TTGAGAAGTGGAATCTAATCATTGGCAACTTGGCTT...GAATGAATTACAGGATCTCTCCTTTGGAGAGTTAGTGTCACGGAGTGACCATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR GCA 90 bp | GAATGGTCACTCCGTGACACTAACTCTCCAAAGGAGAGATCCTGTAATTCATTCACCATTATTATTCCCTaGAGTAGAGATGCGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EWSLRDTNSPKERSCNSFTIIIP*SRDAMK Trigger: CTTCATCGCATCTCTACTGCAGGGAATAATAATGGT...GAATGAATTACAGGATCTCTCCTTTGGAGAGTTAGTGTCACGGAGTGACCATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR CCA 90 bp | CCCACCACTGACAGACGTTTAAAAGATGCATTTGGCTACATCACAGACAATCTCTCCTTTGGAATCCTCTaGCTTGTTTCCACAATAACA | + |
|
Preference number: 4 (lower is better) Translates to: PTTDRRLKDAFGYITDNLSFGIL*LVSTIT Trigger: TGTTATTGTGGAAACAAGCCAGAGGATTCCAAAGGA...GAGATTGTCTGTGATGTAGCCAAATGCATCTTTTAAACGTCTGTCAGTGGTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| 3UTR CAA 72 bp | GAAATCTTACAAATGTCACTCCTCTGTATTTCCCCCTaGATAAAACACAGACAGGAGTCTCCATTCAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: EILQMSLLCISP*IKHRQESPFNP Trigger: TGGGTTGAATGGAGACTCCTGTCTGTGTTTTATCAAGGGGGAAATACAGAGGAGTGACATTTGTAAGATTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR GCA 90 bp | CTTACATACTTACACAGAGACTTTCAAAGATCTGTAATTAACAGTGCATATCCCAATGGCACCAATATCTaGAGAGCCATGACCCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LTYLHRDFQRSVINSAYPNGTNI*RAMTPL Trigger: CAGTGGGGTCATGGCTCTGCAGATATTGGTGCCATT...GGGATATGCACTGTTAATTACAGATCTTTGAAAGTCTCTGTGTAAGTATGTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR TCA 90 bp | CTTACATACTTACACAGAGACTTTCAAAGATCTGTAATTAACAGTGCATATCCCCTTCTGTCACATTTTTaGACACCTCCCAGTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LTYLHRDFQRSVINSAYPLLSHF*TPPSAA Trigger: TGCAGCACTGGGAGGTGTTCAAAAATGTGACAGAAG...GGGATATGCACTGTTAATTACAGATCTTTGAAAGTCTCTGTGTAAGTATGTAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS GCA 90 bp | CATCGTACTTGGGGCTGCAGCTGGCTGGAGTGTGCCCACTGCTGCTaGTGTGGAAGGCTTGCTCTGAGAACTCGTGGTAGTCCAGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: HRTWGCSWLECAHCC*CGRLALRTRGSPDV Trigger: CACATCTGGACTACCACGAGTTCTCAGAGCAAGCCTTCCACAGCAGCAGCAGTGGGCACACTCCAGCCAGCTGCAGCCCCAAGTACGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039956.6 ENSMUST00000154926.2 |
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| CDS CCA 90 bp | CCTCCCTCCCGTCACAGTAGTTATAGCCAGCATAGTCATCGTACTTaGGGCTGCAGCTGGCTGGAGTGTGCCCACTGCTGCTGCTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PPSRHSSYSQHSHRT*GCSWLECAHCCCCG Trigger: TCCACAGCAGCAGCAGTGGGCACACTCCAGCCAGCTGCAGCCCCAAGTACGATGACTATGCTGGCTATAACTACTGTGACGGGAGGGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039956.6 ENSMUST00000154926.2 |
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| CDS GCA 90 bp | AGTCATCGTACTTGGGGCTGCAGCTGGCTGGAGTGTGCCCACTGCTaGTGCTGTGGAAGGCTTGCTCTGAGAACTCGTGGTAGTCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SHRTWGCSWLECAHC*CCGRLALRTRGSPD Trigger: ATCTGGACTACCACGAGTTCTCAGAGCAAGCCTTCCACAGCAGCAGCAGTGGGCACACTCCAGCCAGCTGCAGCCCCAAGTACGATGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039956.6 ENSMUST00000154926.2 |
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| CDS GCA 90 bp | TCCCGTCACAGTAGTTATAGCCAGCATAGTCATCGTACTTGGGGCTaGAGCTGGCTGGAGTGTGCCCACTGCTGCTGCTGTGGAAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SRHSSYSQHSHRTWG*SWLECAHCCCCGRL Trigger: AAGCCTTCCACAGCAGCAGCAGTGGGCACACTCCAGCCAGCTGCAGCCCCAAGTACGATGACTATGCTGGCTATAACTACTGTGACGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039956.6 ENSMUST00000154926.2 |
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| CDS CCA 90 bp | CACAGTAGTTATAGCCAGCATAGTCATCGTACTTGGGGCTGCAGCTaGCTGGAGTGTGCCCACTGCTGCTGCTGTGGAAGGCTTGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: HSSYSQHSHRTWGCS*LECAHCCCCGRLAL Trigger: CAGAGCAAGCCTTCCACAGCAGCAGCAGTGGGCACACTCCAGCCAGCTGCAGCCCCAAGTACGATGACTATGCTGGCTATAACTACTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039956.6 ENSMUST00000154926.2 |
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| CDS-3UTR CAA 90 bp | ATGCGCACACGCACGCACTCCATCTTGGGCCCACAAACACAGCTCAGCACACCTTGTGGCTCTGATCTCTaGCTGAAGGTCTGTGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: MRTRTHSILGPQTQLSTPCGSDL*LKVCAA Trigger: TGCAGCACAGACCTTCAGCAAGAGATCAGAGCCACA...AGGTGTGCTGAGCTGTGTTTGTGGGCCCAAGATGGAGTGCGTGCGTGTGCGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS CCA 90 bp | CATCATCGCCCTCGCTGGACAGATCTTCGTCCTGTAACATGGCGGTaGTTTCCGAAGCCTCCCTCCCGTCACAGTAGTTATAGCCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: HHRPRWTDLRPVTWR*FPKPPSRHSSYSQH Trigger: ATGCTGGCTATAACTACTGTGACGGGAGGGAGGCTTCGGAAACCACCGCCATGTTACAGGACGAAGATCTGTCCAGCGAGGGCGATGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS TCA 90 bp | CCCGATGCTGCTTATAACCATGGCTGTTATGACAGGCTCCCAGCCTaGGTGGAGCACTGTCCTGGTAGCTGGGTGCTTGGCAGCTATTAT | + |
|
Preference number: 5 (lower is better) Translates to: PDAAYNHGCYDRLPA*VEHCPGSWVLGSYY Trigger: ATAATAGCTGCCAAGCACCCAGCTACCAGGACAGTGCTCCACTCAGGCTGGGAGCCTGTCATAACAGCCATGGTTATAAGCAGCATCGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS TCA 90 bp | TTCTCCAGAAGCGATGGACCATCCAGTCGGCGATCCACAGCAGGGTaGACACCTGCAGCACAGCAGCAAACAGGTACACAACAACAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: FSRSDGPSSRRSTAG*TPAAQQQTGTQQQR Trigger: TCTTTGTTGTTGTGTACCTGTTTGCTGCTGTGCTGCAGGTGTTCACCCTGCTGTGGATCGCCGACTGGATGGTCCATCGCTTCTGGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR CAA 90 bp | GGCCTGTCCCTCACACATGCGCACACGCACGCACTCCATCTTGGGCCCACAAACTGCTTTAAAGCCAAGTaGCCAATGATTAGATTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GLSLTHAHTHALHLGPTNCFKAK*PMIRFH Trigger: GTGGAATCTAATCATTGGCAACTTGGCTTTAAAGCA...GTTTGTGGGCCCAAGATGGAGTGCGTGCGTGTGCGCATGTGTGAGGGACAGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS GCA 90 bp | ATGACAGGCTCCCAGCCTGAGTGGAGCACTGTCCTGGTAGCTGGGTaGTTGGCAGCTATTATAATCCAGATAGGAGTCAGAGCCAAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: MTGSQPEWSTVLVAG*LAAIIIQIGVRAKK Trigger: TTTCTTGGCTCTGACTCCTATCTGGATTATAATAGCTGCCAAGCACCCAGCTACCAGGACAGTGCTCCACTCAGGCTGGGAGCCTGTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR CAA 90 bp | ACGCACTCCATCTTGGGCCCACAAACACAGCTCAGCACACCTTCTGCTTTAATCCTGGTAGCTGGGTGCTaGGCAGCTATTATAATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: THSILGPQTQLSTPSALILVAGC*AAIIIQ Trigger: CTGGATTATAATAGCTGCCAAGCACCCAGCTACCAG...GATTAAAGCAGAAGGTGTGCTGAGCTGTGTTTGTGGGCCCAAGATGGAGTGCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR CAA 90 bp | ACGCACTCCATCTTGGGCCCACAAACACAGCTCAGCACACCTTCTGCTTTAATCCAATCCCAACCAAGTTaGGGTCAGATACAGTTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: THSILGPQTQLSTPSALIQSQPS*GQIQLC Trigger: ACACAACTGTATCTGACCCAAACTTGGTTGGGATTG...GATTAAAGCAGAAGGTGTGCTGAGCTGTGTTTGTGGGCCCAAGATGGAGTGCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR CAA 90 bp | TATAATGTGCCTGGTAAGTTAGTGGGAAACCAGTTTTGGAAAGCAGGGTTTGTGATGGGTGTGGCCACGTaGTCAGGGTTTATGCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: YNVPGKLVGNQFWKAGFVMGVAT*SGFMPV Trigger: GACTGGCATAAACCCTGACAACGTGGCCACACCCAT...CACAAACCCTGCTTTCCAAAACTGGTTTCCCACTAACTTACCAGGCACATTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR CAA 90 bp | AAGCTACCTGCTAGTTCTTCACCAGCACAACCTCGCCATGACAATCAACGTCATACCTGGGCAGACTTATaGTTCACTCCTGAACCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: KLPASSSPAQPRHDNQRHTWADL*FTPEPK Trigger: TTTTGGTTCAGGAGTGAACAATAAGTCTGCCCAGGT...ATGACGTTGATTGTCATGGCGAGGTTGTGCTGGTGAAGAACTAGCAGGTAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS-3UTR CAA 90 bp | GAATGGTCACTCCGTGACACTAACTCTCCAAAGGAGAGATCCTGTAATTCATTCTTTATGCCAGTCTTCTaGGAGCCAACGATAACACCA | + |
|
Preference number: 5 (lower is better) Translates to: EWSLRDTNSPKERSCNSFFMPVF*EPTITP Trigger: TGGTGTTATCGTTGGCTCCAAGAAGACTGGCATAAA...GAATGAATTACAGGATCTCTCCTTTGGAGAGTTAGTGTCACGGAGTGACCATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS CCA 72 bp | TATAGCCAGCATAGTCATCGTACTTGGGGCTGCAGCTaGCTGGAGTGTGCCCACTGCTGCTGCTGTGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: YSQHSHRTWGCS*LECAHCCCCGR Trigger: CCTTCCACAGCAGCAGCAGTGGGCACACTCCAGCCAGCTGCAGCCCCAAGTACGATGACTATGCTGGCTATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039956.6 ENSMUST00000154926.2 |
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| CDS CCA 72 bp | CCTCGCTGGACAGATCTTCGTCCTGTAACATGGCGGTaGTTTCCGAAGCCTCCCTCCCGTCACAGTAGTTAT | + |
|
Preference number: 6 (lower is better) Translates to: PRWTDLRPVTWR*FPKPPSRHSSY Trigger: ATAACTACTGTGACGGGAGGGAGGCTTCGGAAACCACCGCCATGTTACAGGACGAAGATCTGTCCAGCGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS CCA 72 bp | GCCAGCAGAAACCGTTCCAAACCCAGCCAGCAAGAATaGCACCAATATCTGCAGAGCCATGACCCCACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: ASRNRSKPSQQE*HQYLQSHDPTG Trigger: TCCAGTGGGGTCATGGCTCTGCAGATATTGGTGCCATTCTTGCTGGCTGGGTTTGGAACGGTTTCTGCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS TCA 72 bp | CAGCCAGCAAGAATGGCACCAATATCTGCAGAGCCATaGCCCCACTGGACTCCTTTGGAATCCTCTGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: QPARMAPISAEP*PHWTPLESSGL Trigger: CAAGCCAGAGGATTCCAAAGGAGTCCAGTGGGGTCATGGCTCTGCAGATATTGGTGCCATTCTTGCTGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS GCA 72 bp | ACCATCCAGTCGGCGATCCACAGCAGGGTGAACACCTaGAGCACAGCAGCAAACAGGTACACAACAACAAAG | + |
|
Preference number: 6 (lower is better) Translates to: TIQSAIHSRVNT*STAANRYTTTK Trigger: CTTTGTTGTTGTGTACCTGTTTGCTGCTGTGCTGCAGGTGTTCACCCTGCTGTGGATCGCCGACTGGATGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS GCA 72 bp | GTTCCAAACCCAGCCAGCAAGAATGGCACCAATATCTaGAGAGCCATGACCCCACTGGACTCCTTTGGAATC | + |
|
Preference number: 6 (lower is better) Translates to: VPNPASKNGTNI*RAMTPLDSFGI Trigger: GATTCCAAAGGAGTCCAGTGGGGTCATGGCTCTGCAGATATTGGTGCCATTCTTGCTGGCTGGGTTTGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS CAA 90 bp | ACAGGCTCCCAGCCTGAGTGGAGCACTGTCCTGGTAGCTGGGTGCTaGGCAGCTATTATAATCCAGATAGGAGTCAGAGCCAAGAAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: TGSQPEWSTVLVAGC*AAIIIQIGVRAKKK Trigger: CTTTTTCTTGGCTCTGACTCCTATCTGGATTATAATAGCTGCCAAGCACCCAGCTACCAGGACAGTGCTCCACTCAGGCTGGGAGCCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS CCA 72 bp | AATGGCCACCAAATTGCCACCGATCCCGTTGATAACTaGCGTGTAAACAACAATCCCAACCAAGTTTGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: NGHQIATDPVDN*RVNNNPNQVWV Trigger: GACCCAAACTTGGTTGGGATTGTTGTTTACACGCCAGTTATCAACGGGATCGGTGGCAATTTGGTGGCCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS CCA 72 bp | CAATATCTGCAGAGCCATGACCCCACTGGACTCCTTTaGAATCCTCTGGCTTGTTTCCACAATAACATCATC | + |
|
Preference number: 6 (lower is better) Translates to: QYLQSHDPTGLL*NPLACFHNNII Trigger: GATGATGTTATTGTGGAAACAAGCCAGAGGATTCCAAAGGAGTCCAGTGGGGTCATGGCTCTGCAGATATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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| CDS TCA 72 bp | CTGTGGCCTGAACCTGCTTTAAAGCCAAGTTGCCAATaGTTAGATTCCACTTCTCAATGGGTGAGTCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: LWPEPALKPSCQ*LDSTSQWVSPS Trigger: AGATGGACTCACCCATTGAGAAGTGGAATCTAATCATTGGCAACTTGGCTTTAAAGCAGGTTCAGGCCACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039956.6 |
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